Rapid builds (Linux only) of a subset of BioC 3.24 Report updated every 4 hours

2/229

affy 1.91.0 (landing page)

Robert D. Shear

3/229

affyio 1.83.0 (landing page)

Ben Bolstad

4/229

affyPLM 1.89.0 (landing page)

Ben Bolstad

5/229

alabaster.base 1.13.0 (landing page)

Aaron Lun

6/229

alabaster.matrix 1.13.0 (landing page)

Aaron Lun

7/229

alabaster.ranges 1.13.0 (landing page)

Aaron Lun

8/229

alabaster.sce 1.13.0 (landing page)

Aaron Lun

9/229

alabaster.schemas 1.13.0 (landing page)

Aaron Lun

10/229

alabaster.se 1.13.0 (landing page)

Aaron Lun

11/229

annotate 1.91.0 (landing page)

Bioconductor Package Maintainer

12/229

AnnotationDbi 1.75.0 (landing page)

Bioconductor Package Maintainer

13/229

AnnotationFilter 1.37.0 (landing page)

Bioconductor Package Maintainer

14/229

AnnotationForge 1.55.0 (landing page)

Bioconductor Package Maintainer

15/229

AnnotationHub 4.3.0 (landing page)

Bioconductor Package Maintainer

skipped

16/229

AnnotationHubData 1.43.0 (landing page)

Bioconductor Package Maintainer

17/229

apeglm 1.35.0 (landing page)

Anqi Zhu

18/229

aroma.light 3.43.0 (landing page)

Henrik Bengtsson

19/229

assorthead 1.7.2 (landing page)

Aaron Lun

20/229

basilisk 1.25.0 (landing page)

Aaron Lun

21/229

basilisk.utils 1.25.0 (landing page)

Aaron Lun

22/229

batchelor 1.29.0 (landing page)

Aaron Lun

23/229

beachmat 2.29.0 (landing page)

Aaron Lun

24/229

beachmat.hdf5 1.11.0 (landing page)

Aaron Lun

25/229

Biobase 2.73.1 (landing page)

Bioconductor Package Maintainer

26/229

BiocBaseUtils 1.15.0 (landing page)

Marcel Ramos

27/229

BiocCheck 1.49.4 (landing page)

Marcel Ramos

28/229

BiocFileCache 3.3.0 (landing page)

Lori Shepherd

29/229

BiocGenerics 0.59.0 (landing page)

Hervé Pagès

30/229

BiocIO 1.23.3 (landing page)

Marcel Ramos

31/229

biocmake 1.5.0 (landing page)

Aaron Lun

32/229

BiocNeighbors 2.7.1 (landing page)

Aaron Lun

33/229

BiocParallel 1.47.0 (landing page)

Jiefei Wang

34/229

BiocPkgTools 1.31.4 (landing page)

Sean Davis

35/229

BiocSingular 1.29.0 (landing page)

Aaron Lun

36/229

BiocStyle 2.41.0 (landing page)

Bioconductor Package Maintainer

37/229

biocthis 1.23.0 (landing page)

Leonardo Collado-Torres

38/229

BiocVersion 3.24.0 (landing page)

Bioconductor Package Maintainer

39/229

biocViews 1.81.0 (landing page)

Bioconductor Package Maintainer

40/229

biomaRt 2.69.0 (landing page)

Hugo Gruson

41/229

biomformat 1.41.0 (landing page)

Paul J. McMurdie

42/229

Biostrings 2.81.1 (landing page)

Hervé Pagès

43/229

biovizBase 1.61.0 (landing page)

Michael Lawrence

44/229

bluster 1.23.0 (landing page)

Aaron Lun

45/229

BSgenome 1.81.0 (landing page)

Hervé Pagès

46/229

BSgenomeForge 1.13.0 (landing page)

Hervé Pagès

47/229

bsseq 1.49.0 (landing page)

Kasper Daniel Hansen

48/229

bumphunter 1.55.0 (landing page)

Tamilselvi Guharaj

49/229

BumpyMatrix 1.21.0 (landing page)

Aaron Lun

50/229

Category 2.79.0 (landing page)

Bioconductor Package Maintainer

skipped

51/229

ChemmineOB 1.51.0 (landing page)

Thomas Girke

TIMEOUT

52/229

ChemmineR 3.65.0 (landing page)

Thomas Girke

53/229

chihaya 1.13.0 (landing page)

Aaron Lun

54/229

cigarillo 1.3.0 (landing page)

Hervé Pagès

55/229

clusterProfiler 4.21.0 (landing page)

Guangchuang Yu

56/229

CNEr 1.49.0 (landing page)

Boris Lenhard Damir Baranasic

57/229

ComplexHeatmap 2.29.0 (landing page)

Zuguang Gu

58/229

CompoundDb 1.17.0 (landing page)

Johannes Rainer

59/229

ConsensusClusterPlus 1.77.0 (landing page)

Matt Wilkerson

60/229

csaw 1.47.0 (landing page)

Aaron Lun

61/229

cytolib 2.25.0 (landing page)

Mike Jiang

62/229

CytoML 2.25.0 (landing page)

Mike Jiang

63/229

DECIPHER 3.9.0 (landing page)

Erik Wright

64/229

DelayedArray 0.39.1 (landing page)

Hervé Pagès

65/229

DelayedMatrixStats 1.35.0 (landing page)

Peter Hickey

66/229

densvis 1.23.0 (landing page)

Alan O'Callaghan

67/229

DESeq2 1.53.0 (landing page)

Michael Love

68/229

DEXSeq 1.59.0 (landing page)

Hugo Gruson

69/229

dir.expiry 1.21.0 (landing page)

Aaron Lun

70/229

DirichletMultinomial 1.55.0 (landing page)

Martin Morgan

71/229

DNAcopy 1.87.0 (landing page)

Venkatraman E. Seshan

72/229

DOSE 4.7.0 (landing page)

Guangchuang Yu

73/229

DropletUtils 1.33.0 (landing page)

Jonathan Griffiths

74/229

DynDoc 1.91.0 (landing page)

Bioconductor Package Maintainer

75/229

EBarrays 2.77.0 (landing page)

Ming Yuan

76/229

EBImage 4.55.0 (landing page)

Andrzej Oleś

77/229

EDASeq 2.47.0 (landing page)

Davide Risso

78/229

edgeR 4.11.0 (landing page)

Yunshun Chen , Gordon Smyth

79/229

eds 1.15.0 (landing page)

Avi Srivastava

80/229

EnhancedVolcano 1.31.0 (landing page)

Jared Andrews

81/229

EnrichedHeatmap 1.43.0 (landing page)

Zuguang Gu

82/229

enrichplot 1.33.0 (landing page)

Guangchuang Yu

83/229

ensembldb 2.37.0 (landing page)

Johannes Rainer

84/229

ExperimentHub 3.3.0 (landing page)

Bioconductor Package Maintainer

85/229

ExperimentHubData 1.39.0 (landing page)

Bioconductor Package Maintainer

86/229

fgsea 1.39.0 (landing page)

Alexey Sergushichev

87/229

fishpond 2.19.0 (landing page)

Michael Love

88/229

flowClust 3.51.0 (landing page)

Greg Finak , Mike Jiang

89/229

flowCore 2.25.0 (landing page)

Mike Jiang

90/229

flowStats 4.25.0 (landing page)

Greg Finak , Mike Jiang

91/229

flowViz 1.77.0 (landing page)

Mike Jiang

92/229

flowWorkspace 4.25.0 (landing page)

Greg Finak , Mike Jiang

93/229

fmcsR 1.55.0 (landing page)

Thomas Girke

94/229

gage 2.63.0 (landing page)

Weijun Luo

95/229

gcrma 2.85.0 (landing page)

Z. Wu

96/229

gdsfmt 1.49.1 (landing page)

Xiuwen Zheng

97/229

genefilter 1.95.0 (landing page)

Bioconductor Package Maintainer

98/229

geneplotter 1.91.0 (landing page)

Bioconductor Package Maintainer

99/229

GenomeInfoDb 1.49.0 (landing page)

Hervé Pagès

100/229

GenomicAlignments 1.49.0 (landing page)

Hervé Pagès

101/229

GenomicFeatures 1.65.0 (landing page)

H. Pagès

102/229

GenomicRanges 1.65.0 (landing page)

Hervé Pagès

103/229

GEOquery 2.81.0 (landing page)

Sean Davis

104/229

ggbio 1.61.0 (landing page)

Michael Lawrence

105/229

ggcyto 1.41.0 (landing page)

Mike Jiang

106/229

ggtree 4.3.0 (landing page)

Guangchuang Yu

107/229

ggtreeExtra 1.23.0 (landing page)

Shuangbin Xu

108/229

glmGamPoi 1.25.0 (landing page)

Constantin Ahlmann-Eltze

109/229

GOSemSim 2.39.0 (landing page)

Guangchuang Yu

110/229

GOstats 2.79.0 (landing page)

Bioconductor Package Maintainer

111/229

gpls 1.85.0 (landing page)

Bioconductor Package Maintainer

112/229

graph 1.91.0 (landing page)

Bioconductor Package Maintainer

113/229

GSEABase 1.75.0 (landing page)

Bioconductor Package Maintainer

114/229

GSVA 2.7.1 (landing page)

Robert Castelo

skipped

115/229

Gviz 1.57.0 (landing page)

Robert Ivanek

116/229

gwascat 2.45.0 (landing page)

VJ Carey

117/229

gypsum 1.9.0 (landing page)

Aaron Lun

118/229

h5mread 1.5.0 (landing page)

Hervé Pagès

119/229

HDF5Array 1.41.0 (landing page)

Hervé Pagès

120/229

hpar 1.55.0 (landing page)

Laurent Gatto

121/229

HubPub 1.21.0 (landing page)

Kayla Interdonato

122/229

IHW 1.41.0 (landing page)

Nikos Ignatiadis

123/229

illuminaio 0.55.0 (landing page)

Kasper Daniel Hansen

124/229

impute 1.87.0 (landing page)

Balasubramanian Narasimhan

125/229

IRanges 2.47.0 (landing page)

Hervé Pagès

126/229

karyoploteR 1.39.0 (landing page)

Bernat Gel

skipped

127/229

KEGGgraph 1.73.0 (landing page)

Jitao David Zhang

128/229

keggorthology 2.65.0 (landing page)

VJ Carey

129/229

KEGGREST 1.53.0 (landing page)

Bioconductor Package Maintainer

130/229

limma 3.69.0 (landing page)

Gordon Smyth

131/229

LoomExperiment 1.31.0 (landing page)

Bioconductor Package Maintainer

132/229

lpsymphony 1.41.0 (landing page)

Vladislav Kim

133/229

maftools 2.29.0 (landing page)

Anand Mayakonda

134/229

MassSpecWavelet 1.79.0 (landing page)

Sergio Oller Moreno

135/229

MatrixGenerics 1.25.0 (landing page)

Peter Hickey

136/229

mbkmeans 1.29.0 (landing page)

Davide Risso

137/229

MetaboCoreUtils 1.21.1 (landing page)

Johannes Rainer

138/229

metagenomeSeq 1.55.0 (landing page)

Joseph N. Paulson

139/229

metapod 1.21.0 (landing page)

Aaron Lun

140/229

microRNA 1.71.0 (landing page)

"Michael Lawrence"

141/229

minet 3.71.0 (landing page)

Patrick E. Meyer

142/229

minfi 1.59.0 (landing page)

Kasper Daniel Hansen

143/229

MLInterfaces 1.93.0 (landing page)

Vincent Carey

144/229

MsBackendMgf 1.21.0 (landing page)

RforMassSpectrometry Package Maintainer

145/229

MsBackendSql 1.13.0 (landing page)

Johannes Rainer

146/229

MsCoreUtils 1.25.3 (landing page)

RforMassSpectrometry Package Maintainer

147/229

MsDataHub 1.13.0 (landing page)

Laurent Gatto

148/229

MsExperiment 1.15.0 (landing page)

Laurent Gatto

149/229

MsFeatures 1.21.0 (landing page)

Johannes Rainer

150/229

MSnbase 2.39.1 (landing page)

Laurent Gatto

TIMEOUT

151/229

MultiAssayExperiment 1.39.0 (landing page)

Marcel Ramos

152/229

multtest 2.69.0 (landing page)

Katherine S. Pollard

153/229

mzID 1.51.0 (landing page)

Laurent Gatto

154/229

mzR 2.47.0 (landing page)

Steffen Neumann

155/229

ncdfFlow 2.59.0 (landing page)

Mike Jiang

156/229

openCyto 2.25.0 (landing page)

Mike Jiang

157/229

OrganismDbi 1.55.1 (landing page)

Bioconductor Package Maintainer

158/229

pathview 1.53.0 (landing page)

Weijun Luo

159/229

pcaMethods 2.5.0 (landing page)

Henning Redestig

160/229

phyloseq 1.57.0 (landing page)

Paul J. McMurdie

161/229

preprocessCore 1.75.0 (landing page)

Ben Bolstad

162/229

pRoloc 1.53.0 (landing page)

Lisa Breckels

163/229

ProtGenerics 1.45.0 (landing page)

Laurent Gatto

164/229

PSMatch 1.17.0 (landing page)

Laurent Gatto

165/229

PTMods 1.1.0 (landing page)

Guillaume Deflandre

166/229

pwalign 1.9.0 (landing page)

Hervé Pagès

167/229

QFeatures 1.23.1 (landing page)

Laurent Gatto

168/229

qvalue 2.45.0 (landing page)

John D. Storey , Andrew J. Bass

169/229

RaggedExperiment 1.37.0 (landing page)

Marcel Ramos

170/229

Rarr 2.1.7 (landing page)

Hugo Gruson

171/229

RBGL 1.89.0 (landing page)

Bioconductor Package Maintainer

172/229

rBiopaxParser 2.53.0 (landing page)

Frank Kramer

173/229

Rdisop 1.73.0 (landing page)

Steffen Neumann

174/229

regioneR 1.45.0 (landing page)

Bernat Gel

175/229

ReportingTools 2.53.0 (landing page)

Jason A. Hackney , Gabriel Becker

176/229

ResidualMatrix 1.23.0 (landing page)

Aaron Lun

177/229

Rgraphviz 2.57.0 (landing page)

Kasper Daniel Hansen

178/229

rhdf5 2.57.0 (landing page)

Hugo Gruson

179/229

rhdf5filters 1.25.0 (landing page)

Hugo Gruson

180/229

Rhdf5lib 2.1.0 (landing page)

Hugo Gruson

181/229

Rhtslib 3.9.0 (landing page)

Hervé Pagès

182/229

Rigraphlib 1.5.1 (landing page)

Aaron Lun

183/229

ROC 1.89.0 (landing page)

Vince Carey

184/229

RProtoBufLib 2.25.0 (landing page)

Mike Jiang

185/229

rpx 2.21.0 (landing page)

Laurent Gatto

186/229

Rsamtools 2.29.0 (landing page)

Bioconductor Package Maintainer

187/229

Rsubread 2.27.1 (landing page)

Wei Shi , Yang Liao and Gordon K Smyth

188/229

rtracklayer 1.73.0 (landing page)

Michael Lawrence

189/229

S4Arrays 1.13.0 (landing page)

Hervé Pagès

190/229

S4Vectors 0.51.1 (landing page)

Hervé Pagès

191/229

ScaledMatrix 1.21.0 (landing page)

Aaron Lun

192/229

scater 1.41.1 (landing page)

Alan O'Callaghan

193/229

scran 1.41.0 (landing page)

Aaron Lun

skipped

194/229

scrapper 1.7.0 (landing page)

Aaron Lun

skipped

195/229

scuttle 1.23.0 (landing page)

Aaron Lun

196/229

Seqinfo 1.3.0 (landing page)

Hervé Pagès

197/229

seqLogo 1.79.0 (landing page)

Robert Ivanek

198/229

sesame 1.31.0 (landing page)

Wanding Zhou

199/229

ShortRead 1.71.0 (landing page)

Bioconductor Package Maintainer

200/229

siggenes 1.87.0 (landing page)

Holger Schwender

201/229

SingleCellExperiment 1.35.0 (landing page)

Davide Risso

202/229

SingleR 2.15.0 (landing page)

Aaron Lun

skipped

203/229

snifter 1.23.0 (landing page)

Alan O'Callaghan

204/229

snpStats 1.63.0 (landing page)

David Clayton

205/229

SparseArray 1.13.2 (landing page)

Hervé Pagès

206/229

sparseMatrixStats 1.25.0 (landing page)

Constantin Ahlmann-Eltze

207/229

SpatialExperiment 1.23.0 (landing page)

Dario Righelli

208/229

Spectra 1.23.0 (landing page)

RforMassSpectrometry Package Maintainer

209/229

SPIA 2.65.0 (landing page)

Adi Laurentiu Tarca

210/229

SummarizedExperiment 1.43.0 (landing page)

Hervé Pagès

211/229

sva 3.61.0 (landing page)

Jeffrey T. Leek , John D. Storey

skipped

212/229

TCGAbiolinks 2.41.0 (landing page)

Tiago Chedraoui Silva

213/229

TENxIO 1.15.0 (landing page)

Marcel Ramos

214/229

TFBSTools 1.51.0 (landing page)

Ge Tan

215/229

tkWidgets 1.91.0 (landing page)

J. Zhang

216/229

treeio 1.37.0 (landing page)

Guangchuang Yu

217/229

txdbmaker 1.9.0 (landing page)

H. Pagès

218/229

tximeta 1.31.0 (landing page)

Michael Love

219/229

tximport 1.41.0 (landing page)

Michael Love

220/229

UCSC.utils 1.9.0 (landing page)

Hervé Pagès

221/229

VariantAnnotation 1.59.0 (landing page)

Bioconductor Package Maintainer

222/229

VisiumIO 1.9.2 (landing page)

Marcel Ramos

223/229

vsn 3.81.0 (landing page)

Wolfgang Huber

224/229

widgetTools 1.91.0 (landing page)

Jianhua Zhang

225/229

Wrench 1.31.0 (landing page)

Hector Corrada Bravo

226/229

xcms 4.11.0 (landing page)

Steffen Neumann

227/229

XVector 0.53.0 (landing page)

Hervé Pagès