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This page was generated on 2025-10-31 09:43 -0400 (Fri, 31 Oct 2025).

HostnameOSArch (*)R versionInstalled pkgs
teran2Linux (Ubuntu 24.04.3 LTS)x86_64R Under development (unstable) (2025-10-28 r88973) -- "Unsuffered Consequences" 917
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Package 35/230HostnameOS / ArchINSTALLBUILDCHECK
BiocPkgTools 1.29.0  (landing page)
Sean Davis
Snapshot Date: 2025-10-31 06:00 -0400 (Fri, 31 Oct 2025)
git_url: https://git.bioconductor.org/packages/BiocPkgTools
git_branch: devel
git_last_commit: a2f816c
git_last_commit_date: 2025-10-29 10:47:30 -0400 (Wed, 29 Oct 2025)
teran2Linux (Ubuntu 24.04.3 LTS) / x86_64  OK    ERROR  skipped

BUILD results for BiocPkgTools on teran2

To the developers/maintainers of the BiocPkgTools package:
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: BiocPkgTools
Version: 1.29.0
Command: /home/rapidbuild/bbs-3.23-bioc-rapid/R/bin/R CMD build --keep-empty-dirs --no-resave-data BiocPkgTools
StartedAt: 2025-10-31 06:32:33 -0400 (Fri, 31 Oct 2025)
EndedAt: 2025-10-31 06:32:50 -0400 (Fri, 31 Oct 2025)
EllapsedTime: 16.3 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/rapidbuild/bbs-3.23-bioc-rapid/R/bin/R CMD build --keep-empty-dirs --no-resave-data BiocPkgTools
###
##############################################################################
##############################################################################


* checking for file ‘BiocPkgTools/DESCRIPTION’ ... OK
* preparing ‘BiocPkgTools’:
* checking DESCRIPTION meta-information ... OK
* installing the package (it is needed to build vignettes)
* creating vignettes ... ERROR
--- re-building ‘BiocPkgTools.Rmd’ using rmarkdown

Quitting from BiocPkgTools.Rmd:61-64 [unnamed-chunk-1]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `get_VIEWS()`:
! could not find function "get_VIEWS"
---
Backtrace:
    ▆
 1. ├─utils::head(biocBuildReport())
 2. └─BiocPkgTools::biocBuildReport()
 3.   └─BiocPkgTools:::get_deprecated_status_df(version)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

Error: processing vignette 'BiocPkgTools.Rmd' failed with diagnostics:
could not find function "get_VIEWS"
--- failed re-building ‘BiocPkgTools.Rmd’

SUMMARY: processing the following file failed:
  ‘BiocPkgTools.Rmd’

Error: Vignette re-building failed.
Execution halted