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This page was generated on 2025-12-11 13:10 -0500 (Thu, 11 Dec 2025).

HostnameOSArch (*)R versionInstalled pkgs
teran2Linux (Ubuntu 24.04.3 LTS)x86_64R Under development (unstable) (2025-10-28 r88973) -- "Unsuffered Consequences" 926
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Package 32/230HostnameOS / ArchINSTALLBUILDCHECK
biocmake 1.3.1  (landing page)
Aaron Lun
Snapshot Date: 2025-12-11 12:00 -0500 (Thu, 11 Dec 2025)
git_url: https://git.bioconductor.org/packages/biocmake
git_branch: devel
git_last_commit: db9e091
git_last_commit_date: 2025-11-21 19:41:01 -0500 (Fri, 21 Nov 2025)
teran2Linux (Ubuntu 24.04.3 LTS) / x86_64  ERROR    OK    ERROR  

INSTALL results for biocmake on teran2

To the developers/maintainers of the biocmake package:
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: biocmake
Version: 1.3.1
Command: /home/rapidbuild/bbs-3.23-bioc-rapid/R/bin/R CMD INSTALL biocmake
StartedAt: 2025-12-11 12:07:44 -0500 (Thu, 11 Dec 2025)
EndedAt: 2025-12-11 12:07:45 -0500 (Thu, 11 Dec 2025)
EllapsedTime: 1.2 seconds
RetCode: 1
Status:   ERROR  

Command output

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### Running command:
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###   /home/rapidbuild/bbs-3.23-bioc-rapid/R/bin/R CMD INSTALL biocmake
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* installing to library ‘/media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/R/site-library’
* installing *source* package ‘biocmake’ ...
** this is package ‘biocmake’ version ‘1.3.1’
** using staged installation
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
Error in base::serialize(base::as.list(base::getNamespace("biocmake"),  : 
  error writing to connection
Calls: <Anonymous> -> withCallingHandlers -> <Anonymous>
Execution halted
ERROR: loading failed
* removing ‘/media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/R/site-library/biocmake’
* restoring previous ‘/media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/R/site-library/biocmake’