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This page was generated on 2025-09-14 10:00 -0400 (Sun, 14 Sep 2025).

HostnameOSArch (*)R versionInstalled pkgs
teran2Linux (Ubuntu 24.04.3 LTS)x86_644.5.1 (2025-06-13) -- "Great Square Root" 917
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Package 153/229HostnameOS / ArchINSTALLBUILDCHECK
MultiAssayExperiment 1.35.9  (landing page)
Marcel Ramos
Snapshot Date: 2025-09-14 06:00 -0400 (Sun, 14 Sep 2025)
git_url: https://git.bioconductor.org/packages/MultiAssayExperiment
git_branch: devel
git_last_commit: 3713158
git_last_commit_date: 2025-08-18 16:35:17 -0400 (Mon, 18 Aug 2025)
teran2Linux (Ubuntu 24.04.3 LTS) / x86_64  OK    ERROR  skipped

BUILD results for MultiAssayExperiment on teran2

To the developers/maintainers of the MultiAssayExperiment package:
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: MultiAssayExperiment
Version: 1.35.9
Command: /home/rapidbuild/bbs-3.22-bioc-rapid/R/bin/R CMD build --keep-empty-dirs --no-resave-data MultiAssayExperiment
StartedAt: 2025-09-14 07:11:29 -0400 (Sun, 14 Sep 2025)
EndedAt: 2025-09-14 07:12:15 -0400 (Sun, 14 Sep 2025)
EllapsedTime: 45.9 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

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### Running command:
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###   /home/rapidbuild/bbs-3.22-bioc-rapid/R/bin/R CMD build --keep-empty-dirs --no-resave-data MultiAssayExperiment
###
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* checking for file ‘MultiAssayExperiment/DESCRIPTION’ ... OK
* preparing ‘MultiAssayExperiment’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘MultiAssayExperiment.Rmd’ using rmarkdown

Quitting from MultiAssayExperiment.Rmd:590-599 [make_sedf_example]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `makeSummarizedExperimentFromDataFrame()`:
! object '.find_GRanges_cols' not found
---
Backtrace:
    ▆
 1. └─SummarizedExperiment::makeSummarizedExperimentFromDataFrame(sedf)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

Error: processing vignette 'MultiAssayExperiment.Rmd' failed with diagnostics:
object '.find_GRanges_cols' not found
--- failed re-building ‘MultiAssayExperiment.Rmd’

--- re-building ‘MultiAssayExperiment_cheatsheet.Rmd’ using rmarkdown
--- finished re-building ‘MultiAssayExperiment_cheatsheet.Rmd’

--- re-building ‘QuickStartMultiAssay.Rmd’ using rmarkdown
--- finished re-building ‘QuickStartMultiAssay.Rmd’

--- re-building ‘UsingHDF5Array.Rmd’ using rmarkdown
--- finished re-building ‘UsingHDF5Array.Rmd’

SUMMARY: processing the following file failed:
  ‘MultiAssayExperiment.Rmd’

Error: Vignette re-building failed.
Execution halted