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This page was generated on 2025-10-30 14:25 -0400 (Thu, 30 Oct 2025).

HostnameOSArch (*)R versionInstalled pkgs
teran2Linux (Ubuntu 24.04.3 LTS)x86_644.5.1 (2025-06-13) -- "Great Square Root" 896
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Package 103/229HostnameOS / ArchINSTALLBUILDCHECK
GEOquery 2.79.0  (landing page)
Sean Davis
Snapshot Date: 2025-10-30 12:00 -0400 (Thu, 30 Oct 2025)
git_url: https://git.bioconductor.org/packages/GEOquery
git_branch: devel
git_last_commit: 05cec56
git_last_commit_date: 2025-10-29 09:57:26 -0400 (Wed, 29 Oct 2025)
teran2Linux (Ubuntu 24.04.3 LTS) / x86_64  OK    OK    WARNINGS  

BUILD results for GEOquery on teran2

To the developers/maintainers of the GEOquery package:
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: GEOquery
Version: 2.79.0
Command: /home/rapidbuild/bbs-3.22-bioc-rapid/R/bin/R CMD build --keep-empty-dirs --no-resave-data GEOquery
StartedAt: 2025-10-30 12:42:47 -0400 (Thu, 30 Oct 2025)
EndedAt: 2025-10-30 12:42:49 -0400 (Thu, 30 Oct 2025)
EllapsedTime: 2.0 seconds
RetCode: 0
Status:   OK  
PackageFile: GEOquery_2.79.0.tar.gz
PackageFileSize: 12.83 MiB

Command output

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### Running command:
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###   /home/rapidbuild/bbs-3.22-bioc-rapid/R/bin/R CMD build --keep-empty-dirs --no-resave-data GEOquery
###
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* checking for file ‘GEOquery/DESCRIPTION’ ... OK
* preparing ‘GEOquery’:
* checking DESCRIPTION meta-information ... OK
* checking for LF line-endings in source and make files and shell scripts
* checking for empty or unneeded directories
  NB: this package now depends on R (>= 4.1.0)
  WARNING: Added dependency on R >= 4.1.0 because package code uses the
  pipe |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘getGEOSuppFiles.R’ ‘rnaseq.R’ ‘searchGEO.R’
* building ‘GEOquery_2.79.0.tar.gz’