Multiple platform build/check report for BioC 3.22 - CHECK results for graper on merida1

Hostname	OS	Arch (*)	R version	Installed pkgs
nebbiolo2	Linux (Ubuntu 24.04.3 LTS)	x86_64	4.5.2 (2025-10-31) -- "[Not] Part in a Rumble"	4883
merida1	macOS 12.7.6 Monterey	x86_64	4.5.2 (2025-10-31) -- "[Not] Part in a Rumble"	4673
kjohnson1	macOS 13.7.5 Ventura	arm64	4.5.2 Patched (2025-11-04 r88984) -- "[Not] Part in a Rumble"	4607
taishan	Linux (openEuler 24.03 LTS)	aarch64	4.5.0 (2025-04-11) -- "How About a Twenty-Six"	4671
Click on any hostname to see more info about the system (e.g. compilers) () as reported by 'uname -p', except on Windows and Mac OS X*

CHECK results for graper on merida1

To the developers/maintainers of the graper package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results

Summary

Package: graper

Version: 1.26.0

Command: /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:graper.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings graper_1.26.0.tar.gz

StartedAt: 2025-12-19 05:09:45 -0500 (Fri, 19 Dec 2025)

EndedAt: 2025-12-19 05:11:56 -0500 (Fri, 19 Dec 2025)

EllapsedTime: 131.1 seconds

RetCode: 0

Status: OK

CheckDir: graper.Rcheck

Warnings: 0

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:graper.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings graper_1.26.0.tar.gz
###
##############################################################################
##############################################################################


* using log directory ‘/Users/biocbuild/bbs-3.22-bioc/meat/graper.Rcheck’
* using R version 4.5.2 (2025-10-31)
* using platform: x86_64-apple-darwin20
* R was compiled by
    Apple clang version 14.0.0 (clang-1400.0.29.202)
    GNU Fortran (GCC) 14.2.0
* running under: macOS Monterey 12.7.6
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.26.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* used C++ compiler: ‘Apple clang version 14.0.0 (clang-1400.0.29.202)’
* used SDK: ‘MacOSX11.3.1.sdk’
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... NOTE
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
  Running ‘testthat.R’
 OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE

Status: 2 NOTEs
See
  ‘/Users/biocbuild/bbs-3.22-bioc/meat/graper.Rcheck/00check.log’
for details.

Installation output

graper.Rcheck/00install.out

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL graper
###
##############################################################################
##############################################################################


* installing to library ‘/Library/Frameworks/R.framework/Versions/4.5-x86_64/Resources/library’
* installing *source* package ‘graper’ ...
** this is package ‘graper’ version ‘1.26.0’
** using staged installation
** libs
using C++ compiler: ‘Apple clang version 14.0.0 (clang-1400.0.29.202)’
using SDK: ‘MacOSX11.3.1.sdk’
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Library/Frameworks/R.framework/Versions/4.5-x86_64/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.5-x86_64/Resources/library/RcppArmadillo/include' -I'/Library/Frameworks/R.framework/Versions/4.5-x86_64/Resources/library/BH/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c RcppExports.cpp -o RcppExports.o
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Library/Frameworks/R.framework/Versions/4.5-x86_64/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.5-x86_64/Resources/library/RcppArmadillo/include' -I'/Library/Frameworks/R.framework/Versions/4.5-x86_64/Resources/library/BH/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c fit_graper.cpp -o fit_graper.o
clang++ -arch x86_64 -std=gnu++17 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/x86_64/lib -o graper.so RcppExports.o fit_graper.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/opt/gfortran/lib/gcc/x86_64-apple-darwin20.0/14.2.0 -L/opt/gfortran/lib -lemutls_w -lheapt_w -lgfortran -lquadmath -F/Library/Frameworks/R.framework/.. -framework R
installing to /Library/Frameworks/R.framework/Versions/4.5-x86_64/Resources/library/00LOCK-graper/00new/graper/libs
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (graper)

Tests output

graper.Rcheck/tests/testthat.Rout


R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble"
Copyright (C) 2025 The R Foundation for Statistical Computing
Platform: x86_64-apple-darwin20

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> library(testthat)
> library(graper)
> 
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-855.784
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-572.832
ELB improved by 282.952

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-512.328
ELB improved by 60.5044

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-473.914
ELB improved by 38.4139

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-455.99
ELB improved by 17.9238

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.46
ELB improved by 8.5303

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.428
ELB improved by 6.03235

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.593
ELB improved by 5.8344

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.313
ELB improved by 6.28016

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.911
ELB improved by 6.40193

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.397
ELB improved by 5.51435

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.562
ELB improved by 3.83475

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.282
ELB improved by 2.28032

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.976
ELB improved by 1.30567

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.186
ELB improved by 0.790198

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.663
ELB improved by 0.523238

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.286
ELB improved by 0.376781

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.997
ELB improved by 0.289255

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.764
ELB improved by 0.23244

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.571
ELB improved by 0.192983

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.407
ELB improved by 0.16412

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.265
ELB improved by 0.142156

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.14
ELB improved by 0.12493

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.029
ELB improved by 0.111102

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.929
ELB improved by 0.0998018

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.839
ELB improved by 0.0904414

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.756
ELB improved by 0.0826073

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.68
ELB improved by 0.0760005

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.61
ELB improved by 0.0703989

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.544
ELB improved by 0.0656337

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.482
ELB improved by 0.061574

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.424
ELB improved by 0.0581168

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.369
ELB improved by 0.05518

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.316
ELB improved by 0.0526976

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.266
ELB improved by 0.0506162

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.217
ELB improved by 0.0488922

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.169
ELB improved by 0.0474901

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.123
ELB improved by 0.0463807

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.077
ELB improved by 0.0455403

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.033
ELB improved by 0.0449499

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.988
ELB improved by 0.0445938

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.943
ELB improved by 0.0444597

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.899
ELB improved by 0.044538

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.854
ELB improved by 0.0448214

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.809
ELB improved by 0.0453042

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.763
ELB improved by 0.0459828

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.716
ELB improved by 0.0468546

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.668
ELB improved by 0.0479181

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.619
ELB improved by 0.0491726

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.568
ELB improved by 0.0506179

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.516
ELB improved by 0.0522541

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.462
ELB improved by 0.0540811

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.406
ELB improved by 0.0560985

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.348
ELB improved by 0.058305

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.287
ELB improved by 0.0606981

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.224
ELB improved by 0.063274

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.158
ELB improved by 0.0660265

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.089
ELB improved by 0.0689471

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.017
ELB improved by 0.0720241

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.941
ELB improved by 0.0752424

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.863
ELB improved by 0.0785828

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.781
ELB improved by 0.0820219

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.695
ELB improved by 0.0855318

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.606
ELB improved by 0.0890802

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.513
ELB improved by 0.092631

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.417
ELB improved by 0.0961448

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.318
ELB improved by 0.0995805

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.215
ELB improved by 0.102897

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.109
ELB improved by 0.106053

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404
ELB improved by 0.109011

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.888
ELB improved by 0.111733

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.774
ELB improved by 0.114177

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.658
ELB improved by 0.116293

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.54
ELB improved by 0.118013

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.42
ELB improved by 0.119239

iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.3
ELB improved by 0.119847

iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.181
ELB improved by 0.119697

iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.062
ELB improved by 0.118666

iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.945
ELB improved by 0.116692

iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.832
ELB improved by 0.113827

iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.721
ELB improved by 0.110269

iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.615
ELB improved by 0.10639

iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.512
ELB improved by 0.102767

iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.412
ELB improved by 0.100298

iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.311
ELB improved by 0.100482

iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.205
ELB improved by 0.106102

iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.083
ELB improved by 0.122481

iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.924
ELB improved by 0.158541

iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.703
ELB improved by 0.221709

iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.407
ELB improved by 0.295279

iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.079
ELB improved by 0.32804

iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.773
ELB improved by 0.306229

iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.497
ELB improved by 0.276322

iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.23
ELB improved by 0.266342

iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.95
ELB improved by 0.280817

iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.627
ELB improved by 0.322263

iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.26
ELB improved by 0.367187

iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.919
ELB improved by 0.340919

iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.684
ELB improved by 0.235481

iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.549
ELB improved by 0.135163

iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.474
ELB improved by 0.0747999

iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.43
ELB improved by 0.0432929

iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.403
ELB improved by 0.0269625

iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.385
ELB improved by 0.0181376

iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.372
ELB improved by 0.013126

iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.362
ELB improved by 0.0101589

iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.354
ELB improved by 0.00834146

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-838.943
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-562.157
ELB improved by 276.786

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-504.254
ELB improved by 57.9029

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-470.382
ELB improved by 33.8727

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-456.516
ELB improved by 13.8656

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.924
ELB improved by 6.5919

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.063
ELB improved by 4.86124

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.35
ELB improved by 4.71306

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.367
ELB improved by 4.98231

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.318
ELB improved by 5.0494

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.782
ELB improved by 4.53646

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.252
ELB improved by 3.52913

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.796
ELB improved by 2.45601

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.172
ELB improved by 1.62426

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.099
ELB improved by 1.07302

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.367
ELB improved by 0.732065

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.839
ELB improved by 0.528125

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.434
ELB improved by 0.405009

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.107
ELB improved by 0.326694

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.834
ELB improved by 0.27364

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.598
ELB improved by 0.23582

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.39
ELB improved by 0.207874

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.203
ELB improved by 0.186697

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.033
ELB improved by 0.170331

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.875
ELB improved by 0.157457

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.728
ELB improved by 0.147146

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.59
ELB improved by 0.138729

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.458
ELB improved by 0.131715

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.332
ELB improved by 0.125745

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.212
ELB improved by 0.120549

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.096
ELB improved by 0.11593

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.984
ELB improved by 0.111742

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.876
ELB improved by 0.107877

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.772
ELB improved by 0.104261

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.671
ELB improved by 0.100843

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.573
ELB improved by 0.0975955

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.479
ELB improved by 0.0945059

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.387
ELB improved by 0.0915754

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.298
ELB improved by 0.0888154

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.212
ELB improved by 0.0862451

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.128
ELB improved by 0.083889

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.047
ELB improved by 0.0817759

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.967
ELB improved by 0.0799373

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.888
ELB improved by 0.078408

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.811
ELB improved by 0.0772262

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.735
ELB improved by 0.0764344

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.658
ELB improved by 0.0760812

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.582
ELB improved by 0.076222

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.505
ELB improved by 0.0769197

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.427
ELB improved by 0.0782434

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.347
ELB improved by 0.0802668

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.264
ELB improved by 0.0830691

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.177
ELB improved by 0.0867447

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.086
ELB improved by 0.0914346

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.988
ELB improved by 0.0973861

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.883
ELB improved by 0.105018

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.768
ELB improved by 0.114887

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.641
ELB improved by 0.127315

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.499
ELB improved by 0.141441

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.345
ELB improved by 0.15424

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.184
ELB improved by 0.161645

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.021
ELB improved by 0.16229

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.863
ELB improved by 0.158771

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.708
ELB improved by 0.154221

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.559
ELB improved by 0.1498

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.413
ELB improved by 0.145237

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.273
ELB improved by 0.139945

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.14
ELB improved by 0.13351

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.014
ELB improved by 0.125794

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.897
ELB improved by 0.116913

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.79
ELB improved by 0.107172

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.693
ELB improved by 0.0969734

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.606
ELB improved by 0.086739

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.529
ELB improved by 0.0768416

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.462
ELB improved by 0.0675699

iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.403
ELB improved by 0.0591179

iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.351
ELB improved by 0.0515935

iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.306
ELB improved by 0.0450366

iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.267
ELB improved by 0.0394414

iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.232
ELB improved by 0.0347789

iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.201
ELB improved by 0.0310189

iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.173
ELB improved by 0.0281553

iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.146
ELB improved by 0.0262406

iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.121
ELB improved by 0.025449

iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.095
ELB improved by 0.0262139

iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.065
ELB improved by 0.0295648

iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.027
ELB improved by 0.0380509

iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.969
ELB improved by 0.0584879

iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.858
ELB improved by 0.110186

iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.617
ELB improved by 0.241099

iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.14
ELB improved by 0.477878

iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.56
ELB improved by 0.579323

iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.159
ELB improved by 0.401641

iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.927
ELB improved by 0.23171

iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.787
ELB improved by 0.140155

iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.706
ELB improved by 0.0806836

iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.664
ELB improved by 0.0421218

iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.642
ELB improved by 0.021604

iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.63
ELB improved by 0.0120945

iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.622
ELB improved by 0.00781273

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-826.639
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-576.604
ELB improved by 250.035

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-514.422
ELB improved by 62.1813

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-467.62
ELB improved by 46.8022

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.015
ELB improved by 23.6051

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.684
ELB improved by 10.3311

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.175
ELB improved by 5.50949

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.258
ELB improved by 3.91658

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.854
ELB improved by 3.4035

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.641
ELB improved by 3.2134

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.596
ELB improved by 3.04522

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.816
ELB improved by 2.77933

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.404
ELB improved by 2.4128

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.388
ELB improved by 2.0161

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.749
ELB improved by 1.63846

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.458
ELB improved by 1.29138

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.454
ELB improved by 1.0042

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.647
ELB improved by 0.806872

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.951
ELB improved by 0.695533

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.306
ELB improved by 0.645324

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.673
ELB improved by 0.632571

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.032
ELB improved by 0.640898

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.373
ELB improved by 0.659293

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.693
ELB improved by 0.679755

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.997
ELB improved by 0.696294

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.292
ELB improved by 0.704958

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.588
ELB improved by 0.704093

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.894
ELB improved by 0.69419

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.217
ELB improved by 0.677224

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.561
ELB improved by 0.655763

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.929
ELB improved by 0.632214

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.32
ELB improved by 0.608349

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.735
ELB improved by 0.585114

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.172
ELB improved by 0.562674

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.632
ELB improved by 0.540606

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.114
ELB improved by 0.518144

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.619
ELB improved by 0.494395

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.151
ELB improved by 0.468538

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.711
ELB improved by 0.440055

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.302
ELB improved by 0.408966

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.926
ELB improved by 0.375935

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.584
ELB improved by 0.342104

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.275
ELB improved by 0.308721

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.998
ELB improved by 0.276749

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.752
ELB improved by 0.24665

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.533
ELB improved by 0.218424

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.341
ELB improved by 0.191812

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.175
ELB improved by 0.166567

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.032
ELB improved by 0.142657

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.912
ELB improved by 0.120323

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.812
ELB improved by 0.0999858

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.73
ELB improved by 0.0820622

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.663
ELB improved by 0.0668042

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.609
ELB improved by 0.0542247

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.565
ELB improved by 0.0441219

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.528
ELB improved by 0.0361601

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.498
ELB improved by 0.0299563

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.473
ELB improved by 0.0251431

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.452
ELB improved by 0.021403

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.433
ELB improved by 0.0184784

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.417
ELB improved by 0.0161697

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.403
ELB improved by 0.0143263

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.39
ELB improved by 0.0128366

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.378
ELB improved by 0.0116187

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.368
ELB improved by 0.0106129

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.358
ELB improved by 0.00977583

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-874.816
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-580.158
ELB improved by 294.657

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-520.835
ELB improved by 59.3234

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-477.388
ELB improved by 43.4471

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-456.187
ELB improved by 21.2009

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.801
ELB improved by 8.38573

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.618
ELB improved by 4.18367

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.995
ELB improved by 2.62272

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439
ELB improved by 1.99492

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.295
ELB improved by 1.70507

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.743
ELB improved by 1.55176

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.289
ELB improved by 1.45388

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.912
ELB improved by 1.37713

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.605
ELB improved by 1.30759

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.365
ELB improved by 1.23917

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.197
ELB improved by 1.16822

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.106
ELB improved by 1.09159

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.099
ELB improved by 1.00665

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.187
ELB improved by 0.912061

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.378
ELB improved by 0.808734

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.678
ELB improved by 0.700353

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.085
ELB improved by 0.592845

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.592
ELB improved by 0.49276

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.187
ELB improved by 0.405304

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.854
ELB improved by 0.333071

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.578
ELB improved by 0.276022

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.345
ELB improved by 0.232341

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.146
ELB improved by 0.199476

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.971
ELB improved by 0.174894

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.815
ELB improved by 0.156452

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.672
ELB improved by 0.142492

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.54
ELB improved by 0.131799

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.417
ELB improved by 0.123504

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.3
ELB improved by 0.117

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.188
ELB improved by 0.111864

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.08
ELB improved by 0.107804

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.975
ELB improved by 0.104626

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.873
ELB improved by 0.102208

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.773
ELB improved by 0.100485

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.673
ELB improved by 0.0994386

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.574
ELB improved by 0.0990951

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.475
ELB improved by 0.0995153

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.374
ELB improved by 0.100786

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.271
ELB improved by 0.102998

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.165
ELB improved by 0.10622

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.054
ELB improved by 0.110448

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.939
ELB improved by 0.11558

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.817
ELB improved by 0.121422

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.69
ELB improved by 0.127762

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.555
ELB improved by 0.13449

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.413
ELB improved by 0.141681

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.264
ELB improved by 0.149578

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.105
ELB improved by 0.158481

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.937
ELB improved by 0.168577

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.757
ELB improved by 0.179755

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.566
ELB improved by 0.191441

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.363
ELB improved by 0.202591

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.151
ELB improved by 0.212074

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.932
ELB improved by 0.219321

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.707
ELB improved by 0.224625

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.478
ELB improved by 0.228657

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.246
ELB improved by 0.231771

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.013
ELB improved by 0.233753

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.779
ELB improved by 0.233999

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.547
ELB improved by 0.231771

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.321
ELB improved by 0.226406

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.103
ELB improved by 0.217488

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.898
ELB improved by 0.204974

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.709
ELB improved by 0.189259

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.538
ELB improved by 0.171139

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.386
ELB improved by 0.151664

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.254
ELB improved by 0.13195

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.141
ELB improved by 0.112984

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.046
ELB improved by 0.0955033

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.966
ELB improved by 0.0799541

iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.899
ELB improved by 0.0665148

iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.844
ELB improved by 0.0551605

iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.798
ELB improved by 0.0457352

iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.76
ELB improved by 0.0380157

iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.728
ELB improved by 0.0317576

iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.702
ELB improved by 0.0267264

iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.679
ELB improved by 0.0227143

iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.659
ELB improved by 0.0195501

iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.642
ELB improved by 0.0171041

iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.627
ELB improved by 0.0152951

iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.613
ELB improved by 0.0141034

iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.599
ELB improved by 0.0136001

iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.585
ELB improved by 0.0140141

iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.569
ELB improved by 0.0158852

iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.549
ELB improved by 0.0204311

iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.519
ELB improved by 0.0304643

iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.466
ELB improved by 0.0527359

iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.362
ELB improved by 0.103412

iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.148
ELB improved by 0.214206

iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.753
ELB improved by 0.395607

iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.251
ELB improved by 0.501607

iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.837
ELB improved by 0.41428

iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.503
ELB improved by 0.333824

iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.162
ELB improved by 0.340644

iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.781
ELB improved by 0.381416

iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.387
ELB improved by 0.393736

iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.034
ELB improved by 0.35357

iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.751
ELB improved by 0.28302

iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.545
ELB improved by 0.205928

iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.408
ELB improved by 0.136667

iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.324
ELB improved by 0.0841887

iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.274
ELB improved by 0.0495991

iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.245
ELB improved by 0.028877

iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.228
ELB improved by 0.0171994

iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.217
ELB improved by 0.0108176

iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.21
ELB improved by 0.00733329

ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
> 
> proc.time()
   user  system elapsed 
  5.426   0.513   5.978

Example timings

graper.Rcheck/graper-Ex.timings

name	user	system	elapsed
coef.graper	0.081	0.040	0.128
getPIPs	0.076	0.038	0.119
graper	0.126	0.052	0.183
makeExampleData	0.018	0.001	0.021
makeExampleDataWithUnequalGroups	0.043	0.007	0.054
plotELBO	0.624	0.045	0.745
plotGroupPenalties	2.588	0.129	2.753
plotPosterior	1.588	0.068	1.666
predict.graper	2.915	0.193	3.128
print.graper	0.074	0.032	0.107