Britta Velten
| Snapshot Date: 2025-09-22 13:40 -0400 (Mon, 22 Sep 2025) |
| git_url: https://git.bioconductor.org/packages/graper |
| git_branch: RELEASE_3_21 |
| git_last_commit: fb5f237 |
| git_last_commit_date: 2025-06-24 03:18:49 -0400 (Tue, 24 Jun 2025) |
| Back to Multiple platform build/check report for BioC 3.21: simplified long |
|
This page was generated on 2025-09-25 11:39 -0400 (Thu, 25 Sep 2025).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) | x86_64 | 4.5.1 (2025-06-13) -- "Great Square Root" | 4827 |
| merida1 | macOS 12.7.5 Monterey | x86_64 | 4.5.1 RC (2025-06-05 r88288) -- "Great Square Root" | 4608 |
| kjohnson1 | macOS 13.6.6 Ventura | arm64 | 4.5.1 Patched (2025-06-14 r88325) -- "Great Square Root" | 4549 |
| kunpeng2 | Linux (openEuler 24.03 LTS) | aarch64 | R Under development (unstable) (2025-02-19 r87757) -- "Unsuffered Consequences" | 4581 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 915/2341 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| graper 1.24.2 (landing page) Britta Velten
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | | ||||||||
| merida1 | macOS 12.7.5 Monterey / x86_64 | OK | OK | OK | OK | | ||||||||
| kjohnson1 | macOS 13.6.6 Ventura / arm64 | OK | OK | OK | OK | | ||||||||
| kunpeng2 | Linux (openEuler 24.03 LTS) / aarch64 | OK | OK | OK | ||||||||||
|
To the developers/maintainers of the graper package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: graper |
| Version: 1.24.2 |
| Command: /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:graper.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings graper_1.24.2.tar.gz |
| StartedAt: 2025-09-23 04:26:39 -0400 (Tue, 23 Sep 2025) |
| EndedAt: 2025-09-23 04:28:53 -0400 (Tue, 23 Sep 2025) |
| EllapsedTime: 133.3 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: graper.Rcheck |
| Warnings: 0 |
##############################################################################
##############################################################################
###
### Running command:
###
### /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:graper.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings graper_1.24.2.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/Users/biocbuild/bbs-3.21-bioc/meat/graper.Rcheck’
* using R version 4.5.1 RC (2025-06-05 r88288)
* using platform: x86_64-apple-darwin20
* R was compiled by
Apple clang version 14.0.0 (clang-1400.0.29.202)
GNU Fortran (GCC) 14.2.0
* running under: macOS Monterey 12.7.6
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.24.2’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* used C++ compiler: ‘Apple clang version 14.0.0 (clang-1400.0.29.202)’
* used SDK: ‘MacOSX11.3.sdk’
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... NOTE
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘testthat.R’
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE
Status: 2 NOTEs
See
‘/Users/biocbuild/bbs-3.21-bioc/meat/graper.Rcheck/00check.log’
for details.
graper.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL graper ### ############################################################################## ############################################################################## * installing to library ‘/Library/Frameworks/R.framework/Versions/4.5-x86_64/Resources/library’ * installing *source* package ‘graper’ ... ** this is package ‘graper’ version ‘1.24.2’ ** using staged installation ** libs using C++ compiler: ‘Apple clang version 14.0.0 (clang-1400.0.29.202)’ using SDK: ‘MacOSX11.3.sdk’ clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Library/Frameworks/R.framework/Versions/4.5-x86_64/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.5-x86_64/Resources/library/RcppArmadillo/include' -I'/Library/Frameworks/R.framework/Versions/4.5-x86_64/Resources/library/BH/include' -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Library/Frameworks/R.framework/Versions/4.5-x86_64/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.5-x86_64/Resources/library/RcppArmadillo/include' -I'/Library/Frameworks/R.framework/Versions/4.5-x86_64/Resources/library/BH/include' -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c fit_graper.cpp -o fit_graper.o clang++ -arch x86_64 -std=gnu++17 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/x86_64/lib -o graper.so RcppExports.o fit_graper.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/opt/gfortran/lib/gcc/x86_64-apple-darwin20.0/14.2.0 -L/opt/gfortran/lib -lemutls_w -lheapt_w -lgfortran -lquadmath -F/Library/Frameworks/R.framework/.. -framework R installing to /Library/Frameworks/R.framework/Versions/4.5-x86_64/Resources/library/00LOCK-graper/00new/graper/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (graper)
graper.Rcheck/tests/testthat.Rout
R version 4.5.1 RC (2025-06-05 r88288) -- "Great Square Root"
Copyright (C) 2025 The R Foundation for Statistical Computing
Platform: x86_64-apple-darwin20
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(testthat)
> library(graper)
>
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-851.952
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-596.575
ELB improved by 255.378
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-536.216
ELB improved by 60.3591
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-486.979
ELB improved by 49.2371
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-458.85
ELB improved by 28.1289
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.736
ELB improved by 13.1139
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.705
ELB improved by 9.03039
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.878
ELB improved by 8.82752
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.111
ELB improved by 8.7673
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.705
ELB improved by 7.40598
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.557
ELB improved by 5.14744
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.439
ELB improved by 3.11827
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.611
ELB improved by 1.82822
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.467
ELB improved by 1.14405
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.696
ELB improved by 0.770239
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.152
ELB improved by 0.544362
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.75
ELB improved by 0.402395
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.438
ELB improved by 0.31176
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.185
ELB improved by 0.252393
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.972
ELB improved by 0.212922
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.785
ELB improved by 0.187586
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.611
ELB improved by 0.174121
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.439
ELB improved by 0.172145
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.26
ELB improved by 0.179098
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.078
ELB improved by 0.181992
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.915
ELB improved by 0.162179
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.79
ELB improved by 0.125047
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.697
ELB improved by 0.09378
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.621
ELB improved by 0.0758107
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.555
ELB improved by 0.0662342
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.494
ELB improved by 0.0604535
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.438
ELB improved by 0.0563645
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.385
ELB improved by 0.0531632
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.334
ELB improved by 0.0505294
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.286
ELB improved by 0.0483114
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.239
ELB improved by 0.0464211
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.194
ELB improved by 0.0447994
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.151
ELB improved by 0.0434026
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.109
ELB improved by 0.0421976
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.068
ELB improved by 0.0411581
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.027
ELB improved by 0.0402636
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.988
ELB improved by 0.0394978
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.949
ELB improved by 0.0388477
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.911
ELB improved by 0.0383032
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.873
ELB improved by 0.037856
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.835
ELB improved by 0.0374999
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.798
ELB improved by 0.03723
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.761
ELB improved by 0.0370422
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.724
ELB improved by 0.0369335
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.687
ELB improved by 0.0369017
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.65
ELB improved by 0.0369447
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.613
ELB improved by 0.0370611
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.576
ELB improved by 0.0372497
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.539
ELB improved by 0.0375094
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.501
ELB improved by 0.0378394
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.462
ELB improved by 0.0382388
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.424
ELB improved by 0.0387069
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.385
ELB improved by 0.0392429
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.345
ELB improved by 0.0398461
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.304
ELB improved by 0.0405159
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.263
ELB improved by 0.0412517
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.221
ELB improved by 0.0420529
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.178
ELB improved by 0.0429196
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.134
ELB improved by 0.043852
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.089
ELB improved by 0.0448513
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.043
ELB improved by 0.0459199
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.996
ELB improved by 0.0470621
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.948
ELB improved by 0.0482854
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.898
ELB improved by 0.0496017
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.847
ELB improved by 0.0510298
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.795
ELB improved by 0.0525995
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.74
ELB improved by 0.0543574
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.684
ELB improved by 0.0563776
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.625
ELB improved by 0.05878
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.563
ELB improved by 0.0617632
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.498
ELB improved by 0.0656683
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.427
ELB improved by 0.0711055
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.347
ELB improved by 0.0792135
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.255
ELB improved by 0.0921899
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.141
ELB improved by 0.114251
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.989
ELB improved by 0.152521
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.775
ELB improved by 0.213598
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.487
ELB improved by 0.287983
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.134
ELB improved by 0.353412
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.689
ELB improved by 0.444711
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.08
ELB improved by 0.60868
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.41
ELB improved by 0.669701
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.918
ELB improved by 0.492464
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.608
ELB improved by 0.309479
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.397
ELB improved by 0.211544
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.233
ELB improved by 0.163642
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.095
ELB improved by 0.138074
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.974
ELB improved by 0.121611
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.865
ELB improved by 0.108399
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.769
ELB improved by 0.0965587
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.683
ELB improved by 0.0859751
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.606
ELB improved by 0.0767712
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.537
ELB improved by 0.0689637
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.474
ELB improved by 0.0626922
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.416
ELB improved by 0.058358
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.359
ELB improved by 0.0567153
iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.3
ELB improved by 0.0593479
iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.229
ELB improved by 0.0703747
iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.127
ELB improved by 0.102116
iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.934
ELB improved by 0.192982
iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.508
ELB improved by 0.425954
iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.781
ELB improved by 0.72714
iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.986
ELB improved by 0.795015
iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.214
ELB improved by 0.772584
iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.397
ELB improved by 0.816419
iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.577
ELB improved by 0.820118
iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.985
ELB improved by 0.592176
iteration 113
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.685
ELB improved by 0.300429
iteration 114
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.533
ELB improved by 0.151171
iteration 115
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.434
ELB improved by 0.0995716
iteration 116
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.344
ELB improved by 0.0897851
iteration 117
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.247
ELB improved by 0.0974702
iteration 118
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.135
ELB improved by 0.111658
iteration 119
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.005
ELB improved by 0.12948
iteration 120
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.851
ELB improved by 0.154029
iteration 121
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.664
ELB improved by 0.187134
iteration 122
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.442
ELB improved by 0.222522
iteration 123
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.202
ELB improved by 0.240182
iteration 124
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.965
ELB improved by 0.236565
iteration 125
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.691
ELB improved by 0.274121
iteration 126
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.301
ELB improved by 0.389457
iteration 127
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.856
ELB improved by 0.444918
iteration 128
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.528
ELB improved by 0.328827
iteration 129
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.351
ELB improved by 0.176161
iteration 130
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.268
ELB improved by 0.0837158
iteration 131
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.228
ELB improved by 0.0399831
iteration 132
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.207
ELB improved by 0.0205011
iteration 133
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.195
ELB improved by 0.0119509
iteration 134
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.187
ELB improved by 0.00814831
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-886.89
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-583.281
ELB improved by 303.609
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-526.134
ELB improved by 57.147
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-487.894
ELB improved by 38.2395
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-468.79
ELB improved by 19.1046
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-460.272
ELB improved by 8.5174
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-455.227
ELB improved by 5.04568
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-451.079
ELB improved by 4.14794
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.142
ELB improved by 3.93666
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.237
ELB improved by 3.9049
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.32
ELB improved by 3.91719
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.438
ELB improved by 3.88198
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.724
ELB improved by 3.71435
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.315
ELB improved by 3.40876
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.332
ELB improved by 2.98288
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.948
ELB improved by 2.38362
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.253
ELB improved by 1.69491
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.129
ELB improved by 1.12446
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.383
ELB improved by 0.745821
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.865
ELB improved by 0.518148
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.479
ELB improved by 0.386104
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.169
ELB improved by 0.30935
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.906
ELB improved by 0.263159
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.673
ELB improved by 0.233689
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.459
ELB improved by 0.213604
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.26
ELB improved by 0.199188
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.071
ELB improved by 0.188717
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.89
ELB improved by 0.181511
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.712
ELB improved by 0.17734
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.536
ELB improved by 0.176069
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.359
ELB improved by 0.177501
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.177
ELB improved by 0.18135
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.99
ELB improved by 0.187238
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.795
ELB improved by 0.194695
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.592
ELB improved by 0.203163
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.38
ELB improved by 0.212016
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.16
ELB improved by 0.220617
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.931
ELB improved by 0.228384
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.696
ELB improved by 0.234873
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.457
ELB improved by 0.239824
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.213
ELB improved by 0.24319
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.968
ELB improved by 0.245114
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.722
ELB improved by 0.245869
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.477
ELB improved by 0.245791
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.231
ELB improved by 0.245209
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.987
ELB improved by 0.244399
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.743
ELB improved by 0.243547
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.501
ELB improved by 0.242747
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.259
ELB improved by 0.241993
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.017
ELB improved by 0.241191
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.777
ELB improved by 0.240174
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.539
ELB improved by 0.238721
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.302
ELB improved by 0.236589
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.068
ELB improved by 0.233541
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.839
ELB improved by 0.229379
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.615
ELB improved by 0.223957
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.398
ELB improved by 0.217197
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.189
ELB improved by 0.209092
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.989
ELB improved by 0.199739
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.8
ELB improved by 0.189382
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.621
ELB improved by 0.178439
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.454
ELB improved by 0.167458
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.297
ELB improved by 0.157027
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.149
ELB improved by 0.147676
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.009
ELB improved by 0.139803
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.876
ELB improved by 0.133574
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.747
ELB improved by 0.128768
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.622
ELB improved by 0.124625
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.502
ELB improved by 0.11989
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.389
ELB improved by 0.113361
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.284
ELB improved by 0.10477
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.189
ELB improved by 0.0952321
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.102
ELB improved by 0.0866221
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.022
ELB improved by 0.0804054
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.945
ELB improved by 0.0767169
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.871
ELB improved by 0.0740339
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.802
ELB improved by 0.0697646
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.739
ELB improved by 0.0620541
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.688
ELB improved by 0.0514705
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.648
ELB improved by 0.0403871
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.617
ELB improved by 0.0308701
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.593
ELB improved by 0.0236553
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.575
ELB improved by 0.0185317
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.56
ELB improved by 0.0149817
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.547
ELB improved by 0.01252
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.536
ELB improved by 0.0107849
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.527
ELB improved by 0.00952939
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-841.996
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-559.289
ELB improved by 282.706
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-496.573
ELB improved by 62.7164
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-456.271
ELB improved by 40.3022
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.381
ELB improved by 18.8896
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.739
ELB improved by 8.64233
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.22
ELB improved by 5.51899
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.558
ELB improved by 4.66141
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.903
ELB improved by 4.65503
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.876
ELB improved by 5.02701
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.282
ELB improved by 5.59483
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.171
ELB improved by 6.11095
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.049
ELB improved by 6.12145
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.745
ELB improved by 5.30411
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.793
ELB improved by 3.95165
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.116
ELB improved by 2.67766
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.321
ELB improved by 1.79488
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-376.055
ELB improved by 1.26573
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-375.098
ELB improved by 0.957281
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.331
ELB improved by 0.766913
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.697
ELB improved by 0.633692
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.171
ELB improved by 0.525775
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.74
ELB improved by 0.431307
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.39
ELB improved by 0.35019
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.105
ELB improved by 0.284669
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-371.871
ELB improved by 0.234119
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-371.676
ELB improved by 0.195535
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-371.51
ELB improved by 0.165639
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-371.368
ELB improved by 0.141919
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-371.245
ELB improved by 0.122687
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-371.139
ELB improved by 0.106828
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-371.045
ELB improved by 0.0935821
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-370.963
ELB improved by 0.0824082
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-370.89
ELB improved by 0.0729046
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-370.825
ELB improved by 0.064765
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-370.767
ELB improved by 0.0577507
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-370.715
ELB improved by 0.051673
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-370.669
ELB improved by 0.046381
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-370.627
ELB improved by 0.0417525
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-370.59
ELB improved by 0.037688
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-370.556
ELB improved by 0.0341055
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-370.525
ELB improved by 0.0309371
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-370.496
ELB improved by 0.0281262
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-370.471
ELB improved by 0.0256253
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-370.447
ELB improved by 0.0233943
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-370.426
ELB improved by 0.0213991
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-370.406
ELB improved by 0.0196107
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-370.388
ELB improved by 0.0180042
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-370.372
ELB improved by 0.0165582
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-370.357
ELB improved by 0.0152542
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-370.343
ELB improved by 0.014076
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-370.33
ELB improved by 0.0130099
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-370.317
ELB improved by 0.0120435
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-370.306
ELB improved by 0.0111661
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-370.296
ELB improved by 0.0103685
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-370.286
ELB improved by 0.0096423
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-897.099
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-573.626
ELB improved by 323.473
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-516.305
ELB improved by 57.3205
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-481.447
ELB improved by 34.8581
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-465.964
ELB improved by 15.4832
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-459.376
ELB improved by 6.58819
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-455.211
ELB improved by 4.16439
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-451.651
ELB improved by 3.55988
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.183
ELB improved by 3.46836
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.593
ELB improved by 3.59006
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.781
ELB improved by 3.81181
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.734
ELB improved by 4.04674
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.586
ELB improved by 4.14814
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.656
ELB improved by 3.9302
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.281
ELB improved by 3.37545
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.626
ELB improved by 2.65442
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.784
ELB improved by 1.84237
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.681
ELB improved by 1.10238
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.03
ELB improved by 0.651334
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.599
ELB improved by 0.430712
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.28
ELB improved by 0.319437
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.024
ELB improved by 0.255933
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.808
ELB improved by 0.215675
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.62
ELB improved by 0.188243
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.451
ELB improved by 0.168598
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.297
ELB improved by 0.154041
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.154
ELB improved by 0.143014
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.02
ELB improved by 0.134567
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.892
ELB improved by 0.128089
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.769
ELB improved by 0.123169
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.649
ELB improved by 0.11952
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.532
ELB improved by 0.116925
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.417
ELB improved by 0.115218
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.303
ELB improved by 0.114262
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.189
ELB improved by 0.113936
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.075
ELB improved by 0.114133
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.96
ELB improved by 0.114751
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.844
ELB improved by 0.115694
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.727
ELB improved by 0.116868
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.609
ELB improved by 0.118188
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.489
ELB improved by 0.119576
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.369
ELB improved by 0.120966
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.246
ELB improved by 0.122307
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.123
ELB improved by 0.123569
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.998
ELB improved by 0.124746
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.872
ELB improved by 0.125853
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.745
ELB improved by 0.126933
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.617
ELB improved by 0.128055
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.488
ELB improved by 0.129315
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.357
ELB improved by 0.13084
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.224
ELB improved by 0.132793
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.089
ELB improved by 0.135401
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.95
ELB improved by 0.138981
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.806
ELB improved by 0.144025
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.654
ELB improved by 0.151353
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.492
ELB improved by 0.162435
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.312
ELB improved by 0.180077
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.102
ELB improved by 0.209748
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.841
ELB improved by 0.261173
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.496
ELB improved by 0.344447
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.052
ELB improved by 0.44488
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.542
ELB improved by 0.509991
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.002
ELB improved by 0.539514
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.389
ELB improved by 0.613363
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.504
ELB improved by 0.884581
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.783
ELB improved by 1.72083
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.097
ELB improved by 2.68672
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.65
ELB improved by 2.44656
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.545
ELB improved by 2.10455
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.296
ELB improved by 2.24981
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.897
ELB improved by 2.39825
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.036
ELB improved by 1.86188
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.683
ELB improved by 1.35245
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.719
ELB improved by 0.963867
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.988
ELB improved by 0.731066
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.348
ELB improved by 0.640612
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.82
ELB improved by 0.527816
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.461
ELB improved by 0.359061
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.237
ELB improved by 0.22322
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.098
ELB improved by 0.13949
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.007
ELB improved by 0.0910953
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.944
ELB improved by 0.0631238
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.897
ELB improved by 0.046455
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.861
ELB improved by 0.0360064
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.832
ELB improved by 0.0290491
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.808
ELB improved by 0.0241313
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.788
ELB improved by 0.0204716
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.77
ELB improved by 0.017637
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.755
ELB improved by 0.0153765
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.741
ELB improved by 0.0135366
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.729
ELB improved by 0.0120177
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.718
ELB improved by 0.010751
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.709
ELB improved by 0.00968714
ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
>
> proc.time()
user system elapsed
5.381 0.507 6.135
graper.Rcheck/graper-Ex.timings
| name | user | system | elapsed | |
| coef.graper | 0.082 | 0.043 | 0.222 | |
| getPIPs | 0.075 | 0.036 | 0.112 | |
| graper | 0.121 | 0.053 | 0.174 | |
| makeExampleData | 0.038 | 0.005 | 0.043 | |
| makeExampleDataWithUnequalGroups | 0.019 | 0.002 | 0.021 | |
| plotELBO | 0.580 | 0.048 | 0.629 | |
| plotGroupPenalties | 2.635 | 0.132 | 3.097 | |
| plotPosterior | 1.585 | 0.047 | 1.640 | |
| predict.graper | 2.949 | 0.193 | 3.232 | |
| print.graper | 0.074 | 0.031 | 0.106 | |