Britta Velten
| Snapshot Date: 2026-03-30 13:45 -0400 (Mon, 30 Mar 2026) |
| git_url: https://git.bioconductor.org/packages/graper |
| git_branch: RELEASE_3_22 |
| git_last_commit: 76fc31b |
| git_last_commit_date: 2025-10-29 10:49:21 -0400 (Wed, 29 Oct 2025) |
| Back to Build/check report for BioC 3.22: simplified long |
|
This page was generated on 2026-03-31 11:57 -0400 (Tue, 31 Mar 2026).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 24.04.3 LTS) | x86_64 | 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" | 4893 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 922/2361 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| graper 1.26.0 (landing page) Britta Velten
| nebbiolo2 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | | ||||||||
| See other builds for graper in R Universe. | ||||||||||||||
|
To the developers/maintainers of the graper package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: graper |
| Version: 1.26.0 |
| Command: /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.22-bioc/R/site-library --timings graper_1.26.0.tar.gz |
| StartedAt: 2026-03-31 00:01:25 -0400 (Tue, 31 Mar 2026) |
| EndedAt: 2026-03-31 00:02:56 -0400 (Tue, 31 Mar 2026) |
| EllapsedTime: 91.1 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: graper.Rcheck |
| Warnings: 0 |
##############################################################################
##############################################################################
###
### Running command:
###
### /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.22-bioc/R/site-library --timings graper_1.26.0.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/home/biocbuild/bbs-3.22-bioc/meat/graper.Rcheck’
* using R version 4.5.2 (2025-10-31)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
gcc (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0
GNU Fortran (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0
* running under: Ubuntu 24.04.4 LTS
* using session charset: UTF-8
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.26.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* used C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04.1) 13.3.0’
* checking installed package size ... INFO
installed size is 6.1Mb
sub-directories of 1Mb or more:
libs 6.0Mb
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... NOTE
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘testthat.R’
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... OK
* checking PDF version of manual ... OK
* DONE
Status: 2 NOTEs
See
‘/home/biocbuild/bbs-3.22-bioc/meat/graper.Rcheck/00check.log’
for details.
graper.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD INSTALL graper ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.22-bioc/R/site-library’ * installing *source* package ‘graper’ ... ** this is package ‘graper’ version ‘1.26.0’ ** using staged installation ** libs using C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04.1) 13.3.0’ g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.22-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/BH/include' -I/usr/local/include -fpic -g -O2 -Wall -Werror=format-security -c RcppExports.cpp -o RcppExports.o g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.22-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/BH/include' -I/usr/local/include -fpic -g -O2 -Wall -Werror=format-security -c fit_graper.cpp -o fit_graper.o g++ -std=gnu++17 -shared -L/home/biocbuild/bbs-3.22-bioc/R/lib -L/usr/local/lib -o graper.so RcppExports.o fit_graper.o -llapack -L/home/biocbuild/bbs-3.22-bioc/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/biocbuild/bbs-3.22-bioc/R/lib -lR installing to /home/biocbuild/bbs-3.22-bioc/R/site-library/00LOCK-graper/00new/graper/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (graper)
graper.Rcheck/tests/testthat.Rout
R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble"
Copyright (C) 2025 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(testthat)
> library(graper)
>
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-884.906
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-564.236
ELB improved by 320.67
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-504.488
ELB improved by 59.7479
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-470.14
ELB improved by 34.348
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-456.623
ELB improved by 13.5168
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.125
ELB improved by 6.49786
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.199
ELB improved by 4.9265
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.54
ELB improved by 4.65896
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.677
ELB improved by 4.86268
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.4
ELB improved by 5.27648
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.762
ELB improved by 5.63796
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.2
ELB improved by 5.56236
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.394
ELB improved by 4.8059
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.772
ELB improved by 3.62175
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.257
ELB improved by 2.51535
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.541
ELB improved by 1.71603
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.356
ELB improved by 1.18497
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.506
ELB improved by 0.850037
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.868
ELB improved by 0.63812
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.375
ELB improved by 0.492546
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.986
ELB improved by 0.3899
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.665
ELB improved by 0.320111
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.392
ELB improved by 0.273125
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.152
ELB improved by 0.240378
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.935
ELB improved by 0.21644
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.737
ELB improved by 0.198274
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.553
ELB improved by 0.184176
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.38
ELB improved by 0.173139
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.215
ELB improved by 0.164534
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.057
ELB improved by 0.15796
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.904
ELB improved by 0.153167
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.754
ELB improved by 0.150025
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.606
ELB improved by 0.148507
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.457
ELB improved by 0.148691
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.306
ELB improved by 0.150774
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.151
ELB improved by 0.155082
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.989
ELB improved by 0.162088
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.817
ELB improved by 0.172379
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.63
ELB improved by 0.186527
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.425
ELB improved by 0.204758
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.199
ELB improved by 0.226381
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.95
ELB improved by 0.249302
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.679
ELB improved by 0.270479
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.391
ELB improved by 0.287766
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.09
ELB improved by 0.301421
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.777
ELB improved by 0.313179
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.453
ELB improved by 0.324191
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.118
ELB improved by 0.334288
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.776
ELB improved by 0.34251
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.428
ELB improved by 0.347731
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.079
ELB improved by 0.348989
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.734
ELB improved by 0.345589
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.396
ELB improved by 0.337152
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.073
ELB improved by 0.323651
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.767
ELB improved by 0.30547
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.484
ELB improved by 0.283435
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.225
ELB improved by 0.258751
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.992
ELB improved by 0.232806
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.785
ELB improved by 0.206935
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.603
ELB improved by 0.182215
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.444
ELB improved by 0.159378
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.305
ELB improved by 0.138814
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.184
ELB improved by 0.120641
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.08
ELB improved by 0.104791
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.988
ELB improved by 0.0910891
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.909
ELB improved by 0.0793092
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.84
ELB improved by 0.0692145
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.779
ELB improved by 0.0605774
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.726
ELB improved by 0.0531905
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.679
ELB improved by 0.0468701
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.638
ELB improved by 0.0414571
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.601
ELB improved by 0.0368147
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.568
ELB improved by 0.0328261
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.539
ELB improved by 0.0293921
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.512
ELB improved by 0.0264283
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.489
ELB improved by 0.0238625
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.467
ELB improved by 0.0216335
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.447
ELB improved by 0.0196886
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.429
ELB improved by 0.0179826
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.413
ELB improved by 0.0164769
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.398
ELB improved by 0.0151386
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.384
ELB improved by 0.0139399
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.371
ELB improved by 0.0128582
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.359
ELB improved by 0.0118753
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.348
ELB improved by 0.0109774
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.338
ELB improved by 0.0101545
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.328
ELB improved by 0.00939961
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-880.19
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-581.776
ELB improved by 298.414
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-521.325
ELB improved by 60.4507
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-480.828
ELB improved by 40.497
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-462.579
ELB improved by 18.2491
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-454.994
ELB improved by 7.58487
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.416
ELB improved by 4.57831
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.79
ELB improved by 3.62593
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.357
ELB improved by 3.43314
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.794
ELB improved by 3.56324
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.012
ELB improved by 3.7821
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.104
ELB improved by 3.90743
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.331
ELB improved by 3.77375
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.022
ELB improved by 3.30853
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.401
ELB improved by 2.62129
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.466
ELB improved by 1.9351
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.056
ELB improved by 1.40916
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.011
ELB improved by 1.04533
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.243
ELB improved by 0.768531
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.695
ELB improved by 0.547232
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.308
ELB improved by 0.387043
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.026
ELB improved by 0.282052
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.811
ELB improved by 0.215373
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.639
ELB improved by 0.17196
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.497
ELB improved by 0.142178
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.376
ELB improved by 0.120575
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.272
ELB improved by 0.104147
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.181
ELB improved by 0.091206
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.1
ELB improved by 0.0807558
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.028
ELB improved by 0.0721709
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.963
ELB improved by 0.0650334
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.904
ELB improved by 0.0590484
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.85
ELB improved by 0.0539991
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.8
ELB improved by 0.0497213
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.754
ELB improved by 0.0460881
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.711
ELB improved by 0.043
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.671
ELB improved by 0.0403787
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.633
ELB improved by 0.0381617
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.596
ELB improved by 0.0362997
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.561
ELB improved by 0.0347533
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.528
ELB improved by 0.033492
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.495
ELB improved by 0.032492
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.464
ELB improved by 0.0317358
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.433
ELB improved by 0.0312116
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.402
ELB improved by 0.0309125
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.371
ELB improved by 0.0308366
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.34
ELB improved by 0.0309869
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.308
ELB improved by 0.0313721
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.276
ELB improved by 0.0320063
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.244
ELB improved by 0.0329107
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.209
ELB improved by 0.0341142
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.174
ELB improved by 0.0356554
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.136
ELB improved by 0.0375849
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.096
ELB improved by 0.0399678
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.053
ELB improved by 0.0428881
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.007
ELB improved by 0.0464536
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.956
ELB improved by 0.0508022
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.9
ELB improved by 0.0561109
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.837
ELB improved by 0.062605
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.767
ELB improved by 0.0705709
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.686
ELB improved by 0.0803684
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.594
ELB improved by 0.0924427
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.487
ELB improved by 0.10733
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.361
ELB improved by 0.125654
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.213
ELB improved by 0.148096
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.038
ELB improved by 0.175353
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.829
ELB improved by 0.208074
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.583
ELB improved by 0.246834
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.29
ELB improved by 0.29218
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.946
ELB improved by 0.344798
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.54
ELB improved by 0.40565
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.064
ELB improved by 0.475806
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.509
ELB improved by 0.555274
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.87
ELB improved by 0.639362
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.158
ELB improved by 0.711314
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.417
ELB improved by 0.74075
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.71
ELB improved by 0.707282
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.089
ELB improved by 0.621331
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.58
ELB improved by 0.508865
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.185
ELB improved by 0.395379
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.887
ELB improved by 0.298031
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.664
ELB improved by 0.2226
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.497
ELB improved by 0.167375
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.369
ELB improved by 0.128022
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.268
ELB improved by 0.100145
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.188
ELB improved by 0.0801246
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.123
ELB improved by 0.0652627
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.069
ELB improved by 0.0537173
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.025
ELB improved by 0.0443638
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.988
ELB improved by 0.0365973
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.958
ELB improved by 0.0301157
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.934
ELB improved by 0.0247465
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.913
ELB improved by 0.0203507
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.896
ELB improved by 0.0167903
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.882
ELB improved by 0.0139279
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.871
ELB improved by 0.0116355
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.861
ELB improved by 0.00980091
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-832.409
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-574.065
ELB improved by 258.344
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-512.431
ELB improved by 61.6342
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-472.662
ELB improved by 39.7686
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-455.046
ELB improved by 17.6162
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.422
ELB improved by 7.62362
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.657
ELB improved by 4.76518
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.63
ELB improved by 4.02736
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.574
ELB improved by 4.05554
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.22
ELB improved by 4.35462
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.725
ELB improved by 4.49476
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.62
ELB improved by 4.10458
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.45
ELB improved by 3.17021
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.315
ELB improved by 2.13553
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.928
ELB improved by 1.38662
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.976
ELB improved by 0.951464
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.272
ELB improved by 0.704455
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.721
ELB improved by 0.550796
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.273
ELB improved by 0.447819
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.897
ELB improved by 0.376672
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.57
ELB improved by 0.326272
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.281
ELB improved by 0.289415
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.019
ELB improved by 0.261614
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.779
ELB improved by 0.240166
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.556
ELB improved by 0.223433
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.345
ELB improved by 0.210397
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.145
ELB improved by 0.200393
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.952
ELB improved by 0.192991
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.764
ELB improved by 0.187936
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.579
ELB improved by 0.185161
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.394
ELB improved by 0.184817
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.207
ELB improved by 0.187346
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.013
ELB improved by 0.193591
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.808
ELB improved by 0.204912
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.585
ELB improved by 0.223188
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.335
ELB improved by 0.250146
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.05
ELB improved by 0.28501
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.729
ELB improved by 0.320653
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.385
ELB improved by 0.344702
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.032
ELB improved by 0.352143
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.68
ELB improved by 0.35233
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.324
ELB improved by 0.356313
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.956
ELB improved by 0.367743
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.57
ELB improved by 0.386115
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.159
ELB improved by 0.410582
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.718
ELB improved by 0.441269
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.238
ELB improved by 0.480052
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.707
ELB improved by 0.531063
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.11
ELB improved by 0.596943
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.446
ELB improved by 0.66428
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.738
ELB improved by 0.70808
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.963
ELB improved by 0.775082
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.991
ELB improved by 0.971873
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.909
ELB improved by 1.08195
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.011
ELB improved by 0.897624
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.344
ELB improved by 0.66692
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.854
ELB improved by 0.489881
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.485
ELB improved by 0.36964
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.205
ELB improved by 0.279448
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.002
ELB improved by 0.202871
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.86
ELB improved by 0.141931
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.761
ELB improved by 0.0990665
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.691
ELB improved by 0.070739
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.639
ELB improved by 0.0520008
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.599
ELB improved by 0.0392609
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.569
ELB improved by 0.0303418
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.545
ELB improved by 0.0239493
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.526
ELB improved by 0.0192849
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.51
ELB improved by 0.0158316
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.497
ELB improved by 0.013241
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.485
ELB improved by 0.0112725
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.476
ELB improved by 0.00975678
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-911.274
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-589.413
ELB improved by 321.861
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-529.592
ELB improved by 59.821
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-492.611
ELB improved by 36.9805
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-476.351
ELB improved by 16.2601
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-469.204
ELB improved by 7.14759
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-464.569
ELB improved by 4.6348
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-460.523
ELB improved by 4.04547
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-456.502
ELB improved by 4.02166
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-452.304
ELB improved by 4.19768
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.986
ELB improved by 4.31785
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.829
ELB improved by 4.15729
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.19
ELB improved by 3.6392
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.29
ELB improved by 2.89938
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.13
ELB improved by 2.15986
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.552
ELB improved by 1.57863
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.376
ELB improved by 1.1755
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.49
ELB improved by 0.886254
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.822
ELB improved by 0.668096
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.309
ELB improved by 0.51234
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.902
ELB improved by 0.40712
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.567
ELB improved by 0.335493
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.282
ELB improved by 0.284467
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.036
ELB improved by 0.246298
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.819
ELB improved by 0.21665
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.626
ELB improved by 0.193027
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.453
ELB improved by 0.173885
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.294
ELB improved by 0.158191
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.149
ELB improved by 0.145202
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.015
ELB improved by 0.134356
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.89
ELB improved by 0.125215
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.772
ELB improved by 0.117432
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.661
ELB improved by 0.110728
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.557
ELB improved by 0.104879
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.457
ELB improved by 0.0997028
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.362
ELB improved by 0.0950545
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.271
ELB improved by 0.0908174
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.184
ELB improved by 0.086899
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.101
ELB improved by 0.0832269
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.021
ELB improved by 0.0797461
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.945
ELB improved by 0.0764157
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.871
ELB improved by 0.0732073
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.801
ELB improved by 0.0701025
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.734
ELB improved by 0.0670913
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.67
ELB improved by 0.0641699
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.609
ELB improved by 0.0613397
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.55
ELB improved by 0.0586047
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.494
ELB improved by 0.0559711
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.441
ELB improved by 0.0534458
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.39
ELB improved by 0.0510351
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.341
ELB improved by 0.0487448
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.294
ELB improved by 0.0465789
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.25
ELB improved by 0.0445402
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.207
ELB improved by 0.0426295
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.166
ELB improved by 0.0408462
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.127
ELB improved by 0.0391881
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.09
ELB improved by 0.0376521
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.053
ELB improved by 0.0362337
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.018
ELB improved by 0.0349279
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.985
ELB improved by 0.0337292
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.952
ELB improved by 0.0326318
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.92
ELB improved by 0.0316295
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.89
ELB improved by 0.0307166
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.86
ELB improved by 0.029887
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.831
ELB improved by 0.0291352
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.802
ELB improved by 0.0284558
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.774
ELB improved by 0.0278437
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.747
ELB improved by 0.0272943
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.72
ELB improved by 0.0268033
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.694
ELB improved by 0.0263666
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.668
ELB improved by 0.0259809
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.642
ELB improved by 0.0256431
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.617
ELB improved by 0.0253505
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.592
ELB improved by 0.0251011
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.567
ELB improved by 0.0248932
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.542
ELB improved by 0.024726
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.518
ELB improved by 0.0245991
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.493
ELB improved by 0.0245132
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.469
ELB improved by 0.0244699
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.444
ELB improved by 0.0244721
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.42
ELB improved by 0.0245244
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.395
ELB improved by 0.0246334
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.37
ELB improved by 0.0248086
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.345
ELB improved by 0.0250634
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.32
ELB improved by 0.0254168
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.294
ELB improved by 0.0258953
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.267
ELB improved by 0.0265371
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.24
ELB improved by 0.0273973
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.211
ELB improved by 0.0285577
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.181
ELB improved by 0.0301421
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.149
ELB improved by 0.0323425
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.113
ELB improved by 0.0354631
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.073
ELB improved by 0.0399917
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.027
ELB improved by 0.0466998
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.97
ELB improved by 0.0567194
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.899
ELB improved by 0.0713557
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.808
ELB improved by 0.0910179
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.695
ELB improved by 0.112848
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.565
ELB improved by 0.129692
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.429
ELB improved by 0.135748
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.296
ELB improved by 0.133686
iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.164
ELB improved by 0.131167
iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.031
ELB improved by 0.133552
iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.888
ELB improved by 0.142691
iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.73
ELB improved by 0.158644
iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.548
ELB improved by 0.181259
iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.337
ELB improved by 0.211559
iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.088
ELB improved by 0.249136
iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.807
ELB improved by 0.280177
iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.528
ELB improved by 0.279038
iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.278
ELB improved by 0.25041
iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.048
ELB improved by 0.229637
iteration 113
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.814
ELB improved by 0.234686
iteration 114
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.554
ELB improved by 0.25973
iteration 115
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.262
ELB improved by 0.292327
iteration 116
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.915
ELB improved by 0.346173
iteration 117
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.428
ELB improved by 0.487875
iteration 118
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.688
ELB improved by 0.740035
iteration 119
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.838
ELB improved by 0.849726
iteration 120
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.187
ELB improved by 0.650943
iteration 121
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.784
ELB improved by 0.402893
iteration 122
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.536
ELB improved by 0.247954
iteration 123
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.369
ELB improved by 0.166908
iteration 124
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.24
ELB improved by 0.128878
iteration 125
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.123
ELB improved by 0.117402
iteration 126
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.999
ELB improved by 0.124044
iteration 127
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.859
ELB improved by 0.139575
iteration 128
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.711
ELB improved by 0.147823
iteration 129
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.577
ELB improved by 0.134798
iteration 130
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.471
ELB improved by 0.105329
iteration 131
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.396
ELB improved by 0.0747765
iteration 132
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.345
ELB improved by 0.0515017
iteration 133
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.309
ELB improved by 0.0359575
iteration 134
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.283
ELB improved by 0.0260386
iteration 135
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.263
ELB improved by 0.019729
iteration 136
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.248
ELB improved by 0.0156338
iteration 137
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.235
ELB improved by 0.0128827
iteration 138
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.224
ELB improved by 0.0109544
iteration 139
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.214
ELB improved by 0.00954089
ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
>
> proc.time()
user system elapsed
2.441 0.241 2.673
graper.Rcheck/graper-Ex.timings
| name | user | system | elapsed | |
| coef.graper | 0.053 | 0.007 | 0.062 | |
| getPIPs | 0.048 | 0.004 | 0.051 | |
| graper | 0.081 | 0.003 | 0.084 | |
| makeExampleData | 0.010 | 0.001 | 0.010 | |
| makeExampleDataWithUnequalGroups | 0.012 | 0.001 | 0.012 | |
| plotELBO | 0.325 | 0.016 | 0.341 | |
| plotGroupPenalties | 1.100 | 0.041 | 1.143 | |
| plotPosterior | 0.654 | 0.005 | 0.658 | |
| predict.graper | 2.040 | 0.019 | 2.060 | |
| print.graper | 0.049 | 0.002 | 0.052 | |