Britta Velten
| Snapshot Date: 2025-11-10 13:45 -0500 (Mon, 10 Nov 2025) |
| git_url: https://git.bioconductor.org/packages/graper |
| git_branch: RELEASE_3_22 |
| git_last_commit: 76fc31b |
| git_last_commit_date: 2025-10-29 10:49:21 -0500 (Wed, 29 Oct 2025) |
| Back to Multiple platform build/check report for BioC 3.22: simplified long |
|
This page was generated on 2025-11-11 12:02 -0500 (Tue, 11 Nov 2025).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 24.04.3 LTS) | x86_64 | 4.5.1 Patched (2025-08-23 r88802) -- "Great Square Root" | 4902 |
| kjohnson3 | macOS 13.7.7 Ventura | arm64 | 4.5.1 Patched (2025-09-10 r88807) -- "Great Square Root" | 4638 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 922/2361 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| graper 1.26.0 (landing page) Britta Velten
| nebbiolo2 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | | ||||||||
| kjohnson3 | macOS 13.7.7 Ventura / arm64 | OK | OK | OK | OK | | ||||||||
|
To the developers/maintainers of the graper package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: graper |
| Version: 1.26.0 |
| Command: /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.22-bioc/R/site-library --timings graper_1.26.0.tar.gz |
| StartedAt: 2025-11-11 00:25:16 -0500 (Tue, 11 Nov 2025) |
| EndedAt: 2025-11-11 00:26:45 -0500 (Tue, 11 Nov 2025) |
| EllapsedTime: 89.1 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: graper.Rcheck |
| Warnings: 0 |
##############################################################################
##############################################################################
###
### Running command:
###
### /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.22-bioc/R/site-library --timings graper_1.26.0.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/home/biocbuild/bbs-3.22-bioc/meat/graper.Rcheck’
* using R version 4.5.1 Patched (2025-08-23 r88802)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
gcc (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0
GNU Fortran (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0
* running under: Ubuntu 24.04.3 LTS
* using session charset: UTF-8
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.26.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* used C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0’
* checking installed package size ... INFO
installed size is 6.0Mb
sub-directories of 1Mb or more:
libs 5.8Mb
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... NOTE
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘testthat.R’
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... OK
* checking PDF version of manual ... OK
* DONE
Status: 2 NOTEs
See
‘/home/biocbuild/bbs-3.22-bioc/meat/graper.Rcheck/00check.log’
for details.
graper.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD INSTALL graper ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.22-bioc/R/site-library’ * installing *source* package ‘graper’ ... ** this is package ‘graper’ version ‘1.26.0’ ** using staged installation ** libs using C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0’ g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.22-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/BH/include' -I/usr/local/include -fpic -g -O2 -Wall -Werror=format-security -c RcppExports.cpp -o RcppExports.o g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.22-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/BH/include' -I/usr/local/include -fpic -g -O2 -Wall -Werror=format-security -c fit_graper.cpp -o fit_graper.o g++ -std=gnu++17 -shared -L/home/biocbuild/bbs-3.22-bioc/R/lib -L/usr/local/lib -o graper.so RcppExports.o fit_graper.o -llapack -L/home/biocbuild/bbs-3.22-bioc/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/biocbuild/bbs-3.22-bioc/R/lib -lR installing to /home/biocbuild/bbs-3.22-bioc/R/site-library/00LOCK-graper/00new/graper/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (graper)
graper.Rcheck/tests/testthat.Rout
R version 4.5.1 Patched (2025-08-23 r88802) -- "Great Square Root"
Copyright (C) 2025 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(testthat)
> library(graper)
>
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-829.326
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-585.226
ELB improved by 244.1
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-523.407
ELB improved by 61.8188
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-471.945
ELB improved by 51.4623
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.277
ELB improved by 27.668
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.251
ELB improved by 11.0257
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.951
ELB improved by 5.30021
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.34
ELB improved by 3.61085
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.426
ELB improved by 2.91427
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.93
ELB improved by 2.49615
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.756
ELB improved by 2.17375
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.865
ELB improved by 1.89125
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.229
ELB improved by 1.63559
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.823
ELB improved by 1.40623
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.619
ELB improved by 1.20436
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.589
ELB improved by 1.02947
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.71
ELB improved by 0.878963
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.961
ELB improved by 0.749052
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.325
ELB improved by 0.636358
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.786
ELB improved by 0.53922
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.328
ELB improved by 0.457504
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.937
ELB improved by 0.391218
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.597
ELB improved by 0.339641
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.296
ELB improved by 0.301601
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.02
ELB improved by 0.275978
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.758
ELB improved by 0.261607
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.501
ELB improved by 0.25693
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.241
ELB improved by 0.259981
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.973
ELB improved by 0.268661
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.692
ELB improved by 0.280977
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.396
ELB improved by 0.295154
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.087
ELB improved by 0.309668
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.763
ELB improved by 0.323306
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.428
ELB improved by 0.335229
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.083
ELB improved by 0.345037
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.73
ELB improved by 0.352757
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.372
ELB improved by 0.358735
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.008
ELB improved by 0.363452
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.641
ELB improved by 0.367324
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.27
ELB improved by 0.370541
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.897
ELB improved by 0.372992
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.523
ELB improved by 0.374259
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.149
ELB improved by 0.373683
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.779
ELB improved by 0.37047
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.415
ELB improved by 0.363822
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.062
ELB improved by 0.353087
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.724
ELB improved by 0.337902
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.406
ELB improved by 0.318323
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.111
ELB improved by 0.294908
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.842
ELB improved by 0.26868
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.601
ELB improved by 0.240923
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.388
ELB improved by 0.212911
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.203
ELB improved by 0.185681
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.043
ELB improved by 0.159989
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.906
ELB improved by 0.136358
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.791
ELB improved by 0.11515
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.695
ELB improved by 0.0965826
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.614
ELB improved by 0.0807186
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.546
ELB improved by 0.0674709
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.49
ELB improved by 0.0566297
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.442
ELB improved by 0.0479068
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.401
ELB improved by 0.0409831
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.365
ELB improved by 0.0355475
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.334
ELB improved by 0.0313222
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.306
ELB improved by 0.0280768
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.28
ELB improved by 0.0256348
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.256
ELB improved by 0.0238763
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.234
ELB improved by 0.0227421
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.211
ELB improved by 0.0222427
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.189
ELB improved by 0.0224783
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.165
ELB improved by 0.0236771
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.139
ELB improved by 0.026258
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.108
ELB improved by 0.0309096
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.07
ELB improved by 0.0385842
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.02
ELB improved by 0.0500378
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.955
ELB improved by 0.0641489
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.88
ELB improved by 0.0752774
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.805
ELB improved by 0.0747649
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.745
ELB improved by 0.060645
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.703
ELB improved by 0.0415082
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.677
ELB improved by 0.0260529
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.661
ELB improved by 0.0164588
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.649
ELB improved by 0.0111846
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.641
ELB improved by 0.00835121
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-880.244
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-573.15
ELB improved by 307.094
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-515.675
ELB improved by 57.4756
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-478.108
ELB improved by 37.5664
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-462.429
ELB improved by 15.6796
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-456.081
ELB improved by 6.34772
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-452.087
ELB improved by 3.99343
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.503
ELB improved by 3.58438
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.831
ELB improved by 3.67209
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.988
ELB improved by 3.84249
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.166
ELB improved by 3.82271
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.744
ELB improved by 3.42225
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.057
ELB improved by 2.68701
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.165
ELB improved by 1.89126
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.898
ELB improved by 1.26766
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.034
ELB improved by 0.863948
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.41
ELB improved by 0.623767
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.928
ELB improved by 0.481607
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.535
ELB improved by 0.393302
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.2
ELB improved by 0.334502
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.908
ELB improved by 0.292922
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.645
ELB improved by 0.262287
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.406
ELB improved by 0.238987
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.186
ELB improved by 0.220617
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.98
ELB improved by 0.205458
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.788
ELB improved by 0.192308
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.607
ELB improved by 0.180391
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.438
ELB improved by 0.169269
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.279
ELB improved by 0.158748
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.131
ELB improved by 0.148797
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.991
ELB improved by 0.139492
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.86
ELB improved by 0.130979
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.737
ELB improved by 0.123464
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.62
ELB improved by 0.117232
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.507
ELB improved by 0.112678
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.396
ELB improved by 0.110345
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.286
ELB improved by 0.110889
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.171
ELB improved by 0.114828
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.049
ELB improved by 0.121924
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.918
ELB improved by 0.13051
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.781
ELB improved by 0.137753
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.64
ELB improved by 0.140856
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.502
ELB improved by 0.13725
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.377
ELB improved by 0.125101
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.271
ELB improved by 0.106444
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.184
ELB improved by 0.0871694
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.112
ELB improved by 0.0717972
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.051
ELB improved by 0.0610562
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.997
ELB improved by 0.0537347
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.949
ELB improved by 0.048527
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.904
ELB improved by 0.0445693
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.863
ELB improved by 0.0413731
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.824
ELB improved by 0.0386741
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.788
ELB improved by 0.0363272
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.753
ELB improved by 0.0342485
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.721
ELB improved by 0.0323862
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.69
ELB improved by 0.0307051
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.661
ELB improved by 0.0291798
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.633
ELB improved by 0.0277903
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.607
ELB improved by 0.0265204
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.582
ELB improved by 0.0253563
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.557
ELB improved by 0.0242859
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.534
ELB improved by 0.0232986
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.512
ELB improved by 0.0223851
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.49
ELB improved by 0.0215369
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.469
ELB improved by 0.0207466
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.449
ELB improved by 0.0200076
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.43
ELB improved by 0.0193142
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.411
ELB improved by 0.0186614
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.393
ELB improved by 0.018045
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.376
ELB improved by 0.0174615
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.359
ELB improved by 0.0169082
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.342
ELB improved by 0.0163829
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.327
ELB improved by 0.0158838
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.311
ELB improved by 0.0154099
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.296
ELB improved by 0.01496
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.282
ELB improved by 0.0145335
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.268
ELB improved by 0.0141299
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.254
ELB improved by 0.0137486
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.24
ELB improved by 0.0133892
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.227
ELB improved by 0.0130512
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.215
ELB improved by 0.0127341
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.202
ELB improved by 0.0124374
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.19
ELB improved by 0.0121604
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.178
ELB improved by 0.0119028
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.166
ELB improved by 0.0116638
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.155
ELB improved by 0.0114431
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.144
ELB improved by 0.0112404
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.133
ELB improved by 0.0110553
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.122
ELB improved by 0.0108878
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.111
ELB improved by 0.010738
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.101
ELB improved by 0.0106065
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.09
ELB improved by 0.010494
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.08
ELB improved by 0.0104016
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.069
ELB improved by 0.0103311
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.059
ELB improved by 0.010285
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.049
ELB improved by 0.0102666
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.038
ELB improved by 0.0102803
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.028
ELB improved by 0.0103322
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.018
ELB improved by 0.0104306
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.007
ELB improved by 0.0105868
iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.996
ELB improved by 0.0108166
iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.985
ELB improved by 0.0111422
iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.974
ELB improved by 0.0115954
iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.961
ELB improved by 0.0122235
iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.948
ELB improved by 0.0130978
iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.934
ELB improved by 0.0143296
iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.918
ELB improved by 0.0160989
iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.899
ELB improved by 0.0187064
iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.876
ELB improved by 0.0226763
iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.847
ELB improved by 0.0289593
iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.808
ELB improved by 0.0393489
iteration 113
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.751
ELB improved by 0.0573479
iteration 114
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.661
ELB improved by 0.0899661
iteration 115
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.509
ELB improved by 0.151374
iteration 116
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.241
ELB improved by 0.26862
iteration 117
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.774
ELB improved by 0.467073
iteration 118
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.134
ELB improved by 0.640009
iteration 119
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.565
ELB improved by 0.568231
iteration 120
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.187
ELB improved by 0.378372
iteration 121
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.936
ELB improved by 0.251487
iteration 122
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.744
ELB improved by 0.191308
iteration 123
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.576
ELB improved by 0.167908
iteration 124
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.421
ELB improved by 0.1551
iteration 125
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.289
ELB improved by 0.132163
iteration 126
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.19
ELB improved by 0.0986913
iteration 127
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.122
ELB improved by 0.0687599
iteration 128
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.072
ELB improved by 0.0500825
iteration 129
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.029
ELB improved by 0.0421406
iteration 130
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.986
ELB improved by 0.0431893
iteration 131
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.932
ELB improved by 0.0538347
iteration 132
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.855
ELB improved by 0.077528
iteration 133
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.739
ELB improved by 0.116297
iteration 134
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.583
ELB improved by 0.155318
iteration 135
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.425
ELB improved by 0.15857
iteration 136
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.304
ELB improved by 0.120618
iteration 137
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.227
ELB improved by 0.0773459
iteration 138
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.178
ELB improved by 0.048475
iteration 139
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.146
ELB improved by 0.0323297
iteration 140
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.122
ELB improved by 0.0235523
iteration 141
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.104
ELB improved by 0.0186149
iteration 142
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.088
ELB improved by 0.0156586
iteration 143
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.074
ELB improved by 0.0137448
iteration 144
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.062
ELB improved by 0.0123892
iteration 145
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.051
ELB improved by 0.0113297
iteration 146
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.04
ELB improved by 0.010417
iteration 147
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.031
ELB improved by 0.00956615
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-824.048
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-605.689
ELB improved by 218.359
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-548.26
ELB improved by 57.4293
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-497.833
ELB improved by 50.427
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-464.201
ELB improved by 33.6319
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.731
ELB improved by 15.4695
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.071
ELB improved by 6.6602
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.545
ELB improved by 4.52622
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.418
ELB improved by 4.12646
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.416
ELB improved by 4.00176
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.747
ELB improved by 3.6694
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.684
ELB improved by 3.06328
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.304
ELB improved by 2.37994
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.529
ELB improved by 1.77529
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.217
ELB improved by 1.31112
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.209
ELB improved by 1.00827
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.374
ELB improved by 0.835415
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.627
ELB improved by 0.746376
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.92
ELB improved by 0.707675
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.22
ELB improved by 0.699562
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.509
ELB improved by 0.710976
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.774
ELB improved by 0.735668
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.004
ELB improved by 0.769918
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.192
ELB improved by 0.811112
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.336
ELB improved by 0.856578
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.434
ELB improved by 0.902394
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.491
ELB improved by 0.94233
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.524
ELB improved by 0.967529
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.556
ELB improved by 0.967757
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.621
ELB improved by 0.934617
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.755
ELB improved by 0.865964
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.986
ELB improved by 0.768851
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.329
ELB improved by 0.657646
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.781
ELB improved by 0.547904
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.33
ELB improved by 0.451292
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.955
ELB improved by 0.37448
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.636
ELB improved by 0.319472
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.353
ELB improved by 0.283145
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.095
ELB improved by 0.257099
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.865
ELB improved by 0.230469
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.668
ELB improved by 0.197047
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.507
ELB improved by 0.160455
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.379
ELB improved by 0.128009
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.277
ELB improved by 0.102322
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.195
ELB improved by 0.0819198
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.13
ELB improved by 0.0652577
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.078
ELB improved by 0.0519724
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.036
ELB improved by 0.0419875
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.001
ELB improved by 0.0348162
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.971
ELB improved by 0.0296915
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.946
ELB improved by 0.0259106
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.923
ELB improved by 0.022983
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.902
ELB improved by 0.0206107
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.883
ELB improved by 0.0186213
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.866
ELB improved by 0.0169138
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.851
ELB improved by 0.0154257
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.837
ELB improved by 0.0141157
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.824
ELB improved by 0.0129542
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.812
ELB improved by 0.011919
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.801
ELB improved by 0.0109925
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.791
ELB improved by 0.0101605
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.781
ELB improved by 0.00941143
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-864.575
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-555.378
ELB improved by 309.196
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-499.012
ELB improved by 56.3667
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-468.783
ELB improved by 30.2293
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-456.324
ELB improved by 12.459
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.858
ELB improved by 6.46594
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.674
ELB improved by 5.18386
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.556
ELB improved by 5.11777
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.201
ELB improved by 5.35524
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.72
ELB improved by 5.48075
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.476
ELB improved by 5.24422
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.85
ELB improved by 4.62562
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.199
ELB improved by 3.65068
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.686
ELB improved by 2.51383
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.047
ELB improved by 1.63862
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.922
ELB improved by 1.12544
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.056
ELB improved by 0.865218
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.304
ELB improved by 0.752311
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.594
ELB improved by 0.709892
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.922
ELB improved by 0.672205
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.312
ELB improved by 0.609748
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.769
ELB improved by 0.543661
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.273
ELB improved by 0.495855
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.807
ELB improved by 0.465826
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.361
ELB improved by 0.446244
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.929
ELB improved by 0.431822
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.509
ELB improved by 0.419313
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.103
ELB improved by 0.406708
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.71
ELB improved by 0.392981
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.332
ELB improved by 0.377884
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.97
ELB improved by 0.361679
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.625
ELB improved by 0.344894
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.297
ELB improved by 0.328132
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.985
ELB improved by 0.311962
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.688
ELB improved by 0.29687
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.405
ELB improved by 0.283252
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.134
ELB improved by 0.271432
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.872
ELB improved by 0.261707
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.618
ELB improved by 0.254385
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.368
ELB improved by 0.249805
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.12
ELB improved by 0.248173
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.871
ELB improved by 0.248942
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.621
ELB improved by 0.249738
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.375
ELB improved by 0.246347
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.139
ELB improved by 0.235964
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.918
ELB improved by 0.220678
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.713
ELB improved by 0.205392
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.519
ELB improved by 0.193435
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.334
ELB improved by 0.185584
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.152
ELB improved by 0.181256
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.973
ELB improved by 0.179327
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.795
ELB improved by 0.178324
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.618
ELB improved by 0.176517
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.446
ELB improved by 0.17221
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.282
ELB improved by 0.164216
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.129
ELB improved by 0.152239
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.993
ELB improved by 0.136921
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.873
ELB improved by 0.119543
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.771
ELB improved by 0.101577
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.687
ELB improved by 0.0843149
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.618
ELB improved by 0.0686644
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.563
ELB improved by 0.0551154
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.52
ELB improved by 0.0438086
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.485
ELB improved by 0.0346428
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.457
ELB improved by 0.0273789
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.436
ELB improved by 0.02172
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.418
ELB improved by 0.0173653
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.404
ELB improved by 0.0140407
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.393
ELB improved by 0.0115127
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.383
ELB improved by 0.00959121
ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
>
> proc.time()
user system elapsed
2.186 0.167 2.342
graper.Rcheck/graper-Ex.timings
| name | user | system | elapsed | |
| coef.graper | 0.052 | 0.001 | 0.054 | |
| getPIPs | 0.051 | 0.001 | 0.052 | |
| graper | 0.080 | 0.004 | 0.085 | |
| makeExampleData | 0.010 | 0.001 | 0.011 | |
| makeExampleDataWithUnequalGroups | 0.013 | 0.000 | 0.013 | |
| plotELBO | 0.323 | 0.032 | 0.356 | |
| plotGroupPenalties | 1.096 | 0.047 | 1.145 | |
| plotPosterior | 0.640 | 0.014 | 0.653 | |
| predict.graper | 2.067 | 0.023 | 2.090 | |
| print.graper | 0.047 | 0.009 | 0.057 | |