Britta Velten
| Snapshot Date: 2026-01-01 13:45 -0500 (Thu, 01 Jan 2026) |
| git_url: https://git.bioconductor.org/packages/graper |
| git_branch: RELEASE_3_22 |
| git_last_commit: 76fc31b |
| git_last_commit_date: 2025-10-29 10:49:21 -0500 (Wed, 29 Oct 2025) |
| Back to Multiple platform build/check report for BioC 3.22: simplified long |
|
This page was generated on 2026-01-05 11:57 -0500 (Mon, 05 Jan 2026).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 24.04.3 LTS) | x86_64 | 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" | 4883 |
| taishan | Linux (openEuler 24.03 LTS) | aarch64 | 4.5.0 (2025-04-11) -- "How About a Twenty-Six" | 4671 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 922/2361 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| graper 1.26.0 (landing page) Britta Velten
| nebbiolo2 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | | ||||||||
| taishan | Linux (openEuler 24.03 LTS) / aarch64 | OK | OK | NA | ||||||||||
|
To the developers/maintainers of the graper package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: graper |
| Version: 1.26.0 |
| Command: /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.22-bioc/R/site-library --timings graper_1.26.0.tar.gz |
| StartedAt: 2026-01-02 00:06:04 -0500 (Fri, 02 Jan 2026) |
| EndedAt: 2026-01-02 00:07:36 -0500 (Fri, 02 Jan 2026) |
| EllapsedTime: 92.1 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: graper.Rcheck |
| Warnings: 0 |
##############################################################################
##############################################################################
###
### Running command:
###
### /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.22-bioc/R/site-library --timings graper_1.26.0.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/home/biocbuild/bbs-3.22-bioc/meat/graper.Rcheck’
* using R version 4.5.2 (2025-10-31)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
gcc (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0
GNU Fortran (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0
* running under: Ubuntu 24.04.3 LTS
* using session charset: UTF-8
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.26.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* used C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0’
* checking installed package size ... INFO
installed size is 6.1Mb
sub-directories of 1Mb or more:
libs 6.0Mb
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... NOTE
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘testthat.R’
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... OK
* checking PDF version of manual ... OK
* DONE
Status: 2 NOTEs
See
‘/home/biocbuild/bbs-3.22-bioc/meat/graper.Rcheck/00check.log’
for details.
graper.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD INSTALL graper ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.22-bioc/R/site-library’ * installing *source* package ‘graper’ ... ** this is package ‘graper’ version ‘1.26.0’ ** using staged installation ** libs using C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0’ g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.22-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/BH/include' -I/usr/local/include -fpic -g -O2 -Wall -Werror=format-security -c RcppExports.cpp -o RcppExports.o g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.22-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/BH/include' -I/usr/local/include -fpic -g -O2 -Wall -Werror=format-security -c fit_graper.cpp -o fit_graper.o g++ -std=gnu++17 -shared -L/home/biocbuild/bbs-3.22-bioc/R/lib -L/usr/local/lib -o graper.so RcppExports.o fit_graper.o -llapack -L/home/biocbuild/bbs-3.22-bioc/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/biocbuild/bbs-3.22-bioc/R/lib -lR installing to /home/biocbuild/bbs-3.22-bioc/R/site-library/00LOCK-graper/00new/graper/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (graper)
graper.Rcheck/tests/testthat.Rout
R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble"
Copyright (C) 2025 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(testthat)
> library(graper)
>
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-869.634
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-553.28
ELB improved by 316.354
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-494.397
ELB improved by 58.8828
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-463.825
ELB improved by 30.5715
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-452.504
ELB improved by 11.3218
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.544
ELB improved by 4.95938
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.423
ELB improved by 3.12093
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.94
ELB improved by 2.48331
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.717
ELB improved by 2.22272
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.637
ELB improved by 2.08063
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.66
ELB improved by 1.97649
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.781
ELB improved by 1.87943
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.005
ELB improved by 1.77565
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.345
ELB improved by 1.66006
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.814
ELB improved by 1.53081
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.429
ELB improved by 1.38528
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.205
ELB improved by 1.22404
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.146
ELB improved by 1.05867
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.237
ELB improved by 0.909391
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.443
ELB improved by 0.793471
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.726
ELB improved by 0.717089
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.05
ELB improved by 0.67589
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.389
ELB improved by 0.660891
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.725
ELB improved by 0.664712
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.04
ELB improved by 0.684994
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.316
ELB improved by 0.723454
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.536
ELB improved by 0.779952
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.688
ELB improved by 0.848854
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.759
ELB improved by 0.928266
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.736
ELB improved by 1.02297
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.602
ELB improved by 1.13467
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.31
ELB improved by 1.29152
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.698
ELB improved by 1.6121
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.573
ELB improved by 2.12457
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.268
ELB improved by 2.30571
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.135
ELB improved by 2.13241
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.302
ELB improved by 1.83297
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.845
ELB improved by 1.45771
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.753
ELB improved by 1.09193
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.943
ELB improved by 0.810039
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.331
ELB improved by 0.612135
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.88
ELB improved by 0.450525
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.567
ELB improved by 0.312483
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.352
ELB improved by 0.215238
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.195
ELB improved by 0.157307
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.071
ELB improved by 0.12439
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.966
ELB improved by 0.10502
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.873
ELB improved by 0.0921803
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.792
ELB improved by 0.0814893
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.721
ELB improved by 0.0706822
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.662
ELB improved by 0.0596532
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.612
ELB improved by 0.0496212
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.57
ELB improved by 0.0417223
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.534
ELB improved by 0.0363205
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.501
ELB improved by 0.0331896
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.469
ELB improved by 0.0318733
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.437
ELB improved by 0.0318285
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.405
ELB improved by 0.0323696
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.372
ELB improved by 0.0326031
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.34
ELB improved by 0.0315856
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.312
ELB improved by 0.0287788
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.287
ELB improved by 0.0244472
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.268
ELB improved by 0.0195069
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.253
ELB improved by 0.0149229
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.242
ELB improved by 0.0112481
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.233
ELB improved by 0.00858228
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-853.706
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-573.218
ELB improved by 280.487
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-512.204
ELB improved by 61.0146
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-471.051
ELB improved by 41.1529
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-452.911
ELB improved by 18.1395
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.729
ELB improved by 6.18247
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.643
ELB improved by 3.08623
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.411
ELB improved by 2.23147
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.512
ELB improved by 1.89873
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.752
ELB improved by 1.76089
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.039
ELB improved by 1.713
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.322
ELB improved by 1.71656
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.568
ELB improved by 1.75425
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.761
ELB improved by 1.80686
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.92
ELB improved by 1.84044
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.114
ELB improved by 1.80687
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.446
ELB improved by 1.66794
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.015
ELB improved by 1.43029
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.866
ELB improved by 1.14973
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.971
ELB improved by 0.894763
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.264
ELB improved by 0.706695
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.674
ELB improved by 0.589979
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.146
ELB improved by 0.528432
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.643
ELB improved by 0.502675
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.145
ELB improved by 0.497725
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.642
ELB improved by 0.503744
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.127
ELB improved by 0.514665
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.6
ELB improved by 0.526883
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.062
ELB improved by 0.53844
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.513
ELB improved by 0.548562
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.956
ELB improved by 0.557344
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.39
ELB improved by 0.565365
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.817
ELB improved by 0.573121
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.237
ELB improved by 0.5802
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.652
ELB improved by 0.584583
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.069
ELB improved by 0.582967
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.497
ELB improved by 0.572745
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.942
ELB improved by 0.554497
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.409
ELB improved by 0.533414
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.889
ELB improved by 0.520182
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.356
ELB improved by 0.532708
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.763
ELB improved by 0.593128
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.072
ELB improved by 0.690456
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.344
ELB improved by 0.728437
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.671
ELB improved by 0.673111
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.039
ELB improved by 0.631967
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.388
ELB improved by 0.65071
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.7
ELB improved by 0.687914
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.024
ELB improved by 0.676109
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.404
ELB improved by 0.620095
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.859
ELB improved by 0.545197
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.413
ELB improved by 0.445536
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.081
ELB improved by 0.33266
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.841
ELB improved by 0.239938
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.657
ELB improved by 0.183233
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.502
ELB improved by 0.15543
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.357
ELB improved by 0.145335
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.213
ELB improved by 0.144116
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.069
ELB improved by 0.143235
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.936
ELB improved by 0.133428
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.825
ELB improved by 0.110796
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.743
ELB improved by 0.0823742
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.685
ELB improved by 0.0580525
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.643
ELB improved by 0.0413681
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.612
ELB improved by 0.0308989
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.588
ELB improved by 0.0243354
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.568
ELB improved by 0.0200291
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.551
ELB improved by 0.0170243
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.536
ELB improved by 0.0147993
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.523
ELB improved by 0.013069
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.511
ELB improved by 0.0116729
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.501
ELB improved by 0.0105165
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.491
ELB improved by 0.00954114
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-926.842
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-586.394
ELB improved by 340.449
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-533.33
ELB improved by 53.064
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-502.07
ELB improved by 31.26
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-485.275
ELB improved by 16.7948
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-476.716
ELB improved by 8.55865
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-471.073
ELB improved by 5.64259
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-466.221
ELB improved by 4.85282
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-461.583
ELB improved by 4.63781
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-456.897
ELB improved by 4.68544
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-452.046
ELB improved by 4.85123
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.081
ELB improved by 4.9652
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.254
ELB improved by 4.82693
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.929
ELB improved by 4.32505
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.385
ELB improved by 3.54401
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.724
ELB improved by 2.6612
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.874
ELB improved by 1.84963
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.635
ELB improved by 1.23922
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.798
ELB improved by 0.837099
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.21
ELB improved by 0.587698
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.775
ELB improved by 0.434748
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.437
ELB improved by 0.338537
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.162
ELB improved by 0.274916
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.932
ELB improved by 0.2303
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.734
ELB improved by 0.197281
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.563
ELB improved by 0.171784
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.411
ELB improved by 0.151473
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.276
ELB improved by 0.134931
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.155
ELB improved by 0.121238
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.045
ELB improved by 0.109765
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.945
ELB improved by 0.10006
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.853
ELB improved by 0.091788
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.769
ELB improved by 0.0846923
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.69
ELB improved by 0.0785737
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.617
ELB improved by 0.0732739
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.548
ELB improved by 0.0686658
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.483
ELB improved by 0.0646461
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.422
ELB improved by 0.0611299
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.364
ELB improved by 0.0580474
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.309
ELB improved by 0.055341
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.256
ELB improved by 0.0529637
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.205
ELB improved by 0.0508779
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.156
ELB improved by 0.0490546
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.109
ELB improved by 0.0474738
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.062
ELB improved by 0.0461251
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.017
ELB improved by 0.045009
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.973
ELB improved by 0.0441399
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.93
ELB improved by 0.043551
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.886
ELB improved by 0.0433019
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.843
ELB improved by 0.0434921
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.799
ELB improved by 0.0442813
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.753
ELB improved by 0.0459214
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.704
ELB improved by 0.048797
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.651
ELB improved by 0.0534542
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.59
ELB improved by 0.0605356
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.52
ELB improved by 0.0704238
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.437
ELB improved by 0.0823751
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.344
ELB improved by 0.0936122
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.243
ELB improved by 0.100274
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.143
ELB improved by 0.10079
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.045
ELB improved by 0.0972883
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.952
ELB improved by 0.0928418
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.863
ELB improved by 0.0891144
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.777
ELB improved by 0.0865126
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.692
ELB improved by 0.0849856
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.607
ELB improved by 0.0844207
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.523
ELB improved by 0.0847327
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.437
ELB improved by 0.0858571
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.349
ELB improved by 0.0877325
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.259
ELB improved by 0.090288
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.165
ELB improved by 0.0934338
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.068
ELB improved by 0.097054
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.967
ELB improved by 0.100999
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.862
ELB improved by 0.105082
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.753
ELB improved by 0.109072
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.64
ELB improved by 0.112702
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.525
ELB improved by 0.115672
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.407
ELB improved by 0.117678
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.289
ELB improved by 0.11843
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.171
ELB improved by 0.117695
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.056
ELB improved by 0.115326
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.944
ELB improved by 0.11129
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.839
ELB improved by 0.10569
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.74
ELB improved by 0.0987497
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.649
ELB improved by 0.090796
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.567
ELB improved by 0.0822125
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.493
ELB improved by 0.0733928
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.429
ELB improved by 0.0646956
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.372
ELB improved by 0.0564129
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.324
ELB improved by 0.0487543
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.282
ELB improved by 0.0418469
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.246
ELB improved by 0.035745
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.216
ELB improved by 0.0304466
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.19
ELB improved by 0.02591
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.168
ELB improved by 0.022069
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.149
ELB improved by 0.0188452
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.133
ELB improved by 0.0161566
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.119
ELB improved by 0.0139238
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.107
ELB improved by 0.0120731
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.096
ELB improved by 0.0105387
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.087
ELB improved by 0.00926324
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-870.202
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-578.126
ELB improved by 292.076
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-515.995
ELB improved by 62.1314
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-477.009
ELB improved by 38.9861
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-459.97
ELB improved by 17.0391
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-452.14
ELB improved by 7.82966
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.565
ELB improved by 5.57527
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.35
ELB improved by 5.215
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.843
ELB improved by 5.50667
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.714
ELB improved by 6.12873
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.929
ELB improved by 6.78585
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.041
ELB improved by 6.88776
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.111
ELB improved by 5.92963
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.824
ELB improved by 4.28759
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.038
ELB improved by 2.7854
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.262
ELB improved by 1.77599
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.081
ELB improved by 1.18117
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.238
ELB improved by 0.842913
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.591
ELB improved by 0.647431
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.062
ELB improved by 0.528852
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.61
ELB improved by 0.451584
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.215
ELB improved by 0.395663
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.866
ELB improved by 0.348392
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.564
ELB improved by 0.302442
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.308
ELB improved by 0.256034
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.097
ELB improved by 0.210882
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.927
ELB improved by 0.170237
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.789
ELB improved by 0.137188
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.677
ELB improved by 0.112551
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.582
ELB improved by 0.0948992
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.5
ELB improved by 0.0821636
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.427
ELB improved by 0.0726875
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.362
ELB improved by 0.0654038
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.302
ELB improved by 0.059673
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.247
ELB improved by 0.0551081
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.195
ELB improved by 0.0514623
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.147
ELB improved by 0.0485679
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.101
ELB improved by 0.0463049
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.056
ELB improved by 0.0445841
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.013
ELB improved by 0.0433379
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.97
ELB improved by 0.0425146
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.928
ELB improved by 0.0420746
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.886
ELB improved by 0.0419879
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.844
ELB improved by 0.0422324
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.801
ELB improved by 0.0427922
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.757
ELB improved by 0.043657
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.713
ELB improved by 0.0448209
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.666
ELB improved by 0.046282
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.618
ELB improved by 0.0480421
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.568
ELB improved by 0.0501062
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.516
ELB improved by 0.0524823
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.46
ELB improved by 0.0551819
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.402
ELB improved by 0.0582192
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.341
ELB improved by 0.0616124
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.275
ELB improved by 0.0653833
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.206
ELB improved by 0.0695585
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.131
ELB improved by 0.0741698
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.052
ELB improved by 0.0792561
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.967
ELB improved by 0.0848639
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.876
ELB improved by 0.0910508
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.778
ELB improved by 0.0978878
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.673
ELB improved by 0.105465
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.559
ELB improved by 0.113897
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.436
ELB improved by 0.123334
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.302
ELB improved by 0.133977
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.156
ELB improved by 0.146087
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.996
ELB improved by 0.160004
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.82
ELB improved by 0.176138
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.625
ELB improved by 0.194923
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.408
ELB improved by 0.216672
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.167
ELB improved by 0.241298
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.899
ELB improved by 0.267925
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.604
ELB improved by 0.294588
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.286
ELB improved by 0.318372
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.95
ELB improved by 0.336149
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.604
ELB improved by 0.345582
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.258
ELB improved by 0.345938
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.92
ELB improved by 0.33847
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.593
ELB improved by 0.32646
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.278
ELB improved by 0.315005
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.967
ELB improved by 0.310709
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.646
ELB improved by 0.321497
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.289
ELB improved by 0.356653
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.864
ELB improved by 0.424826
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.349
ELB improved by 0.515694
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.779
ELB improved by 0.569595
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.234
ELB improved by 0.544797
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.771
ELB improved by 0.46364
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.43
ELB improved by 0.340371
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.21
ELB improved by 0.219891
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.075
ELB improved by 0.135929
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.99
ELB improved by 0.084913
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.935
ELB improved by 0.0551073
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.897
ELB improved by 0.0376776
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.87
ELB improved by 0.0271466
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.849
ELB improved by 0.0204631
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.833
ELB improved by 0.0160105
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.82
ELB improved by 0.0129223
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.81
ELB improved by 0.0107096
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.801
ELB improved by 0.00908005
ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
>
> proc.time()
user system elapsed
2.415 0.179 2.580
graper.Rcheck/graper-Ex.timings
| name | user | system | elapsed | |
| coef.graper | 0.051 | 0.002 | 0.054 | |
| getPIPs | 0.050 | 0.011 | 0.061 | |
| graper | 0.078 | 0.008 | 0.086 | |
| makeExampleData | 0.011 | 0.000 | 0.011 | |
| makeExampleDataWithUnequalGroups | 0.008 | 0.004 | 0.013 | |
| plotELBO | 0.322 | 0.030 | 0.352 | |
| plotGroupPenalties | 1.083 | 0.047 | 1.131 | |
| plotPosterior | 0.627 | 0.009 | 0.637 | |
| predict.graper | 2.056 | 0.016 | 2.073 | |
| print.graper | 0.048 | 0.007 | 0.055 | |