Britta Velten
| Snapshot Date: 2025-12-29 13:45 -0500 (Mon, 29 Dec 2025) |
| git_url: https://git.bioconductor.org/packages/graper |
| git_branch: RELEASE_3_22 |
| git_last_commit: 76fc31b |
| git_last_commit_date: 2025-10-29 10:49:21 -0500 (Wed, 29 Oct 2025) |
| Back to Multiple platform build/check report for BioC 3.22: simplified long |
|
This page was generated on 2026-01-01 11:58 -0500 (Thu, 01 Jan 2026).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 24.04.3 LTS) | x86_64 | 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" | 4883 |
| taishan | Linux (openEuler 24.03 LTS) | aarch64 | 4.5.0 (2025-04-11) -- "How About a Twenty-Six" | 4671 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 922/2361 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| graper 1.26.0 (landing page) Britta Velten
| nebbiolo2 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | | ||||||||
| taishan | Linux (openEuler 24.03 LTS) / aarch64 | OK | OK | OK | ||||||||||
|
To the developers/maintainers of the graper package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. - See Martin Grigorov's blog post for how to debug Linux ARM64 related issues on a x86_64 host. |
| Package: graper |
| Version: 1.26.0 |
| Command: /home/biocbuild/R/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/R/R/site-library --no-vignettes --timings graper_1.26.0.tar.gz |
| StartedAt: 2025-12-30 11:45:52 -0000 (Tue, 30 Dec 2025) |
| EndedAt: 2025-12-30 11:47:14 -0000 (Tue, 30 Dec 2025) |
| EllapsedTime: 82.1 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: graper.Rcheck |
| Warnings: 0 |
##############################################################################
##############################################################################
###
### Running command:
###
### /home/biocbuild/R/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/R/R/site-library --no-vignettes --timings graper_1.26.0.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/home/biocbuild/bbs-3.22-bioc/meat/graper.Rcheck’
* using R version 4.5.0 (2025-04-11)
* using platform: aarch64-unknown-linux-gnu
* R was compiled by
aarch64-unknown-linux-gnu-gcc (GCC) 14.2.0
GNU Fortran (GCC) 14.2.0
* running under: openEuler 24.03 (LTS)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.26.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* used C++ compiler: ‘aarch64-unknown-linux-gnu-g++ (GCC) 14.2.0’
* checking installed package size ... INFO
installed size is 6.0Mb
sub-directories of 1Mb or more:
libs 5.8Mb
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... NOTE
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘testthat.R’
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE
Status: 2 NOTEs
See
‘/home/biocbuild/bbs-3.22-bioc/meat/graper.Rcheck/00check.log’
for details.
graper.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/R/R/bin/R CMD INSTALL graper ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/R/R-4.5.0/site-library’ * installing *source* package ‘graper’ ... ** this is package ‘graper’ version ‘1.26.0’ ** using staged installation ** libs using C++ compiler: ‘aarch64-unknown-linux-gnu-g++ (GCC) 14.2.0’ /opt/ohpc/pub/compiler/gcc/14.2.0/bin/aarch64-unknown-linux-gnu-g++ -std=gnu++17 -I"/home/biocbuild/R/R-4.5.0/include" -DNDEBUG -I'/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include' -I'/home/biocbuild/R/R-4.5.0/site-library/RcppArmadillo/include' -I'/home/biocbuild/R/R-4.5.0/site-library/BH/include' -I/usr/local/include -fPIC -g -O2 -Wall -Werror=format-security -c RcppExports.cpp -o RcppExports.o /opt/ohpc/pub/compiler/gcc/14.2.0/bin/aarch64-unknown-linux-gnu-g++ -std=gnu++17 -I"/home/biocbuild/R/R-4.5.0/include" -DNDEBUG -I'/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include' -I'/home/biocbuild/R/R-4.5.0/site-library/RcppArmadillo/include' -I'/home/biocbuild/R/R-4.5.0/site-library/BH/include' -I/usr/local/include -fPIC -g -O2 -Wall -Werror=format-security -c fit_graper.cpp -o fit_graper.o /opt/ohpc/pub/compiler/gcc/14.2.0/bin/aarch64-unknown-linux-gnu-g++ -std=gnu++17 -shared -L/home/biocbuild/R/R-4.5.0/lib -L/usr/local/lib -o graper.so RcppExports.o fit_graper.o -lopenblas -lgfortran -lm -L/home/biocbuild/R/R-4.5.0/lib -lR installing to /home/biocbuild/R/R-4.5.0/site-library/00LOCK-graper/00new/graper/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (graper)
graper.Rcheck/tests/testthat.Rout
R version 4.5.0 (2025-04-11) -- "How About a Twenty-Six"
Copyright (C) 2025 The R Foundation for Statistical Computing
Platform: aarch64-unknown-linux-gnu
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(testthat)
> library(graper)
>
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-848.561
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-559.15
ELB improved by 289.411
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-502.109
ELB improved by 57.041
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-471.809
ELB improved by 30.2999
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-459.655
ELB improved by 12.154
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-454.52
ELB improved by 5.13456
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-451.311
ELB improved by 3.20987
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.833
ELB improved by 2.47762
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.726
ELB improved by 2.10722
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.861
ELB improved by 1.86508
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.192
ELB improved by 1.66841
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.704
ELB improved by 1.48815
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.391
ELB improved by 1.31263
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.253
ELB improved by 1.13858
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.284
ELB improved by 0.969125
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.473
ELB improved by 0.810942
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.802
ELB improved by 0.670468
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.25
ELB improved by 0.552091
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.792
ELB improved by 0.458026
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.404
ELB improved by 0.388016
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.066
ELB improved by 0.338526
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.763
ELB improved by 0.302588
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.491
ELB improved by 0.27189
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.25
ELB improved by 0.241081
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.04
ELB improved by 0.210397
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.856
ELB improved by 0.183492
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.693
ELB improved by 0.163422
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.542
ELB improved by 0.150948
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.397
ELB improved by 0.145235
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.252
ELB improved by 0.14504
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.102
ELB improved by 0.14935
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.945
ELB improved by 0.157548
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.775
ELB improved by 0.169365
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.591
ELB improved by 0.184795
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.387
ELB improved by 0.204005
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.159
ELB improved by 0.227248
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.905
ELB improved by 0.254755
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.618
ELB improved by 0.28661
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.295
ELB improved by 0.322576
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.933
ELB improved by 0.361907
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.53
ELB improved by 0.403206
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.086
ELB improved by 0.444463
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.602
ELB improved by 0.483424
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.084
ELB improved by 0.518415
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.534
ELB improved by 0.549688
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.953
ELB improved by 0.581466
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.329
ELB improved by 0.624205
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.637
ELB improved by 0.691426
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.862
ELB improved by 0.775211
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.038
ELB improved by 0.824295
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.22
ELB improved by 0.817363
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.43
ELB improved by 0.790392
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.67
ELB improved by 0.760164
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.947
ELB improved by 0.722491
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.275
ELB improved by 0.672075
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.669
ELB improved by 0.606555
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.141
ELB improved by 0.527135
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.702
ELB improved by 0.439736
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.348
ELB improved by 0.353651
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.071
ELB improved by 0.277332
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.856
ELB improved by 0.21517
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.688
ELB improved by 0.167397
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.556
ELB improved by 0.131838
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.451
ELB improved by 0.105638
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.364
ELB improved by 0.086234
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.293
ELB improved by 0.0716562
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.232
ELB improved by 0.0605009
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.181
ELB improved by 0.0517954
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.136
ELB improved by 0.0448688
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.096
ELB improved by 0.0392555
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.062
ELB improved by 0.0346291
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.031
ELB improved by 0.0307587
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.004
ELB improved by 0.0274791
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.979
ELB improved by 0.0246702
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.957
ELB improved by 0.0222432
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.936
ELB improved by 0.0201316
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.918
ELB improved by 0.0182839
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.902
ELB improved by 0.0166598
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.886
ELB improved by 0.0152268
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.872
ELB improved by 0.0139587
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.86
ELB improved by 0.0128334
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.848
ELB improved by 0.0118326
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.837
ELB improved by 0.0109407
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.827
ELB improved by 0.0101442
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.817
ELB improved by 0.00943164
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-835.076
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-552.585
ELB improved by 282.491
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-490.961
ELB improved by 61.6246
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.07
ELB improved by 40.8907
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.458
ELB improved by 18.6121
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.108
ELB improved by 7.35045
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.466
ELB improved by 3.64121
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.326
ELB improved by 2.14044
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.97
ELB improved by 1.35644
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.033
ELB improved by 0.936773
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.323
ELB improved by 0.709696
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.739
ELB improved by 0.584294
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.225
ELB improved by 0.513678
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.752
ELB improved by 0.473407
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.301
ELB improved by 0.450401
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.864
ELB improved by 0.437374
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.434
ELB improved by 0.430046
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.008
ELB improved by 0.425729
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.586
ELB improved by 0.422599
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.166
ELB improved by 0.419317
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.751
ELB improved by 0.414847
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.343
ELB improved by 0.40839
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.944
ELB improved by 0.399387
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.556
ELB improved by 0.387554
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.183
ELB improved by 0.372912
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.827
ELB improved by 0.355794
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.49
ELB improved by 0.336811
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.174
ELB improved by 0.316778
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.877
ELB improved by 0.296622
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.6
ELB improved by 0.27728
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.34
ELB improved by 0.259609
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.096
ELB improved by 0.24429
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.864
ELB improved by 0.231746
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.642
ELB improved by 0.222064
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.427
ELB improved by 0.21494
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.217
ELB improved by 0.20969
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.012
ELB improved by 0.205382
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.811
ELB improved by 0.201135
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.614
ELB improved by 0.19647
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.423
ELB improved by 0.191511
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.236
ELB improved by 0.186899
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.053
ELB improved by 0.183487
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.871
ELB improved by 0.182036
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.688
ELB improved by 0.183037
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.501
ELB improved by 0.186665
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.308
ELB improved by 0.192809
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.107
ELB improved by 0.201105
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.896
ELB improved by 0.210973
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.674
ELB improved by 0.221642
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.442
ELB improved by 0.232204
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.2
ELB improved by 0.241691
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.951
ELB improved by 0.249219
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.697
ELB improved by 0.254158
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.441
ELB improved by 0.256291
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.185
ELB improved by 0.255923
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.931
ELB improved by 0.253889
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.679
ELB improved by 0.251509
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.429
ELB improved by 0.250542
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.176
ELB improved by 0.25318
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.914
ELB improved by 0.261899
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.635
ELB improved by 0.278519
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.334
ELB improved by 0.301586
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.01
ELB improved by 0.324002
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.672
ELB improved by 0.337603
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.33
ELB improved by 0.341849
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.989
ELB improved by 0.341668
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.649
ELB improved by 0.339885
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.311
ELB improved by 0.337685
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.971
ELB improved by 0.34011
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.609
ELB improved by 0.361698
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.169
ELB improved by 0.440249
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.498
ELB improved by 0.670694
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.384
ELB improved by 1.11411
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.946
ELB improved by 1.43835
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.49
ELB improved by 1.45616
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.132
ELB improved by 1.35757
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.895
ELB improved by 1.23689
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.85
ELB improved by 1.04547
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.06
ELB improved by 0.790067
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.472
ELB improved by 0.587943
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.02
ELB improved by 0.451859
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.67
ELB improved by 0.349943
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.398
ELB improved by 0.272154
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.182
ELB improved by 0.216149
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.998
ELB improved by 0.18339
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.818
ELB improved by 0.179991
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.616
ELB improved by 0.202394
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.398
ELB improved by 0.218313
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.208
ELB improved by 0.189988
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.075
ELB improved by 0.132714
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.991
ELB improved by 0.0838987
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.937
ELB improved by 0.053962
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.899
ELB improved by 0.0378174
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.87
ELB improved by 0.0295208
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.844
ELB improved by 0.0253547
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.821
ELB improved by 0.0233097
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.799
ELB improved by 0.0222565
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.777
ELB improved by 0.0214458
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.757
ELB improved by 0.0203377
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.738
ELB improved by 0.0186444
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.722
ELB improved by 0.016408
iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.708
ELB improved by 0.0139398
iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.696
ELB improved by 0.0116148
iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.687
ELB improved by 0.00968158
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-841.404
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-578.787
ELB improved by 262.617
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-519.334
ELB improved by 59.4532
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-482.544
ELB improved by 36.7896
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-465.617
ELB improved by 16.927
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-458.001
ELB improved by 7.61547
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-452.99
ELB improved by 5.0112
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.522
ELB improved by 4.46799
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.113
ELB improved by 4.40936
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.717
ELB improved by 4.39565
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.552
ELB improved by 4.16569
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.914
ELB improved by 3.63707
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.986
ELB improved by 2.92881
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.734
ELB improved by 2.252
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.995
ELB improved by 1.73872
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.604
ELB improved by 1.39141
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.447
ELB improved by 1.15616
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.447
ELB improved by 1.00002
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.552
ELB improved by 0.895045
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.744
ELB improved by 0.808002
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.004
ELB improved by 0.740191
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.299
ELB improved by 0.704956
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.622
ELB improved by 0.677502
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.987
ELB improved by 0.63431
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.393
ELB improved by 0.594056
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.817
ELB improved by 0.576038
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.232
ELB improved by 0.585391
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.604
ELB improved by 0.628201
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.88
ELB improved by 0.724094
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.973
ELB improved by 0.906368
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.836
ELB improved by 1.1375
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.599
ELB improved by 1.23676
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.351
ELB improved by 1.24787
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.058
ELB improved by 1.2932
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.707
ELB improved by 1.35131
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.303
ELB improved by 1.40327
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.863
ELB improved by 1.44022
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.418
ELB improved by 1.44537
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.006
ELB improved by 1.41203
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.631
ELB improved by 1.37433
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.181
ELB improved by 1.45066
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.376
ELB improved by 1.80454
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.539
ELB improved by 1.83693
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.377
ELB improved by 1.16177
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.727
ELB improved by 0.650732
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.352
ELB improved by 0.374646
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.124
ELB improved by 0.228019
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.975
ELB improved by 0.148604
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.872
ELB improved by 0.103225
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.797
ELB improved by 0.0755645
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.739
ELB improved by 0.057662
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.693
ELB improved by 0.0454748
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.657
ELB improved by 0.0368278
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.626
ELB improved by 0.0304804
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.6
ELB improved by 0.0256872
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.579
ELB improved by 0.0219793
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.559
ELB improved by 0.0190501
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.543
ELB improved by 0.0166928
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.528
ELB improved by 0.0147644
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.515
ELB improved by 0.0131637
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.503
ELB improved by 0.0118177
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.492
ELB improved by 0.0106731
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.483
ELB improved by 0.00969012
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-858.094
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-585.993
ELB improved by 272.102
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-523.741
ELB improved by 62.2514
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-481.262
ELB improved by 42.479
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-462.652
ELB improved by 18.6101
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-454.556
ELB improved by 8.09615
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.812
ELB improved by 4.7443
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.958
ELB improved by 3.8538
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.316
ELB improved by 3.64197
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.742
ELB improved by 3.57394
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.327
ELB improved by 3.41515
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.284
ELB improved by 3.04233
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.808
ELB improved by 2.47671
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.936
ELB improved by 1.87184
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.56
ELB improved by 1.37565
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.526
ELB improved by 1.03397
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.71
ELB improved by 0.815887
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.043
ELB improved by 0.667766
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.497
ELB improved by 0.545463
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.065
ELB improved by 0.432303
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.73
ELB improved by 0.334737
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.47
ELB improved by 0.260029
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.263
ELB improved by 0.206839
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.094
ELB improved by 0.169684
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.95
ELB improved by 0.143294
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.826
ELB improved by 0.123879
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.717
ELB improved by 0.109004
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.62
ELB improved by 0.0971757
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.533
ELB improved by 0.0874789
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.453
ELB improved by 0.079344
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.381
ELB improved by 0.0724026
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.315
ELB improved by 0.066406
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.253
ELB improved by 0.061179
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.197
ELB improved by 0.0565931
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.144
ELB improved by 0.0525507
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.095
ELB improved by 0.0489757
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.049
ELB improved by 0.045807
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.006
ELB improved by 0.0429951
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.966
ELB improved by 0.040499
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.928
ELB improved by 0.0382843
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.891
ELB improved by 0.0363221
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.857
ELB improved by 0.0345881
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.824
ELB improved by 0.0330613
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.792
ELB improved by 0.0317239
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.761
ELB improved by 0.0305608
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.732
ELB improved by 0.0295591
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.703
ELB improved by 0.0287078
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.675
ELB improved by 0.0279978
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.648
ELB improved by 0.0274215
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.621
ELB improved by 0.0269727
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.594
ELB improved by 0.0266465
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.568
ELB improved by 0.0264392
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.541
ELB improved by 0.0263481
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.515
ELB improved by 0.0263714
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.488
ELB improved by 0.0265082
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.462
ELB improved by 0.0267584
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.435
ELB improved by 0.0271224
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.407
ELB improved by 0.0276011
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.379
ELB improved by 0.0281959
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.35
ELB improved by 0.0289084
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.32
ELB improved by 0.0297401
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.289
ELB improved by 0.0306926
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.258
ELB improved by 0.0317674
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.225
ELB improved by 0.0329658
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.19
ELB improved by 0.0342892
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.155
ELB improved by 0.0357389
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.117
ELB improved by 0.0373169
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.078
ELB improved by 0.039026
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.037
ELB improved by 0.0408708
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.995
ELB improved by 0.0428581
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.95
ELB improved by 0.0449975
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.902
ELB improved by 0.0473032
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.853
ELB improved by 0.049794
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.8
ELB improved by 0.0524951
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.745
ELB improved by 0.0554393
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.686
ELB improved by 0.0586686
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.624
ELB improved by 0.0622362
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.557
ELB improved by 0.0662094
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.487
ELB improved by 0.070673
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.411
ELB improved by 0.075735
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.33
ELB improved by 0.0815336
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.241
ELB improved by 0.0882492
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.145
ELB improved by 0.0961228
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.04
ELB improved by 0.105486
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.923
ELB improved by 0.116811
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.792
ELB improved by 0.130801
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.644
ELB improved by 0.148533
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.472
ELB improved by 0.171705
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.269
ELB improved by 0.202924
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.023
ELB improved by 0.245723
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.72
ELB improved by 0.303051
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.348
ELB improved by 0.372518
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.906
ELB improved by 0.44188
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.409
ELB improved by 0.496368
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.879
ELB improved by 0.53026
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.337
ELB improved by 0.542063
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.808
ELB improved by 0.529327
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.314
ELB improved by 0.493271
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.875
ELB improved by 0.439633
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.5
ELB improved by 0.374971
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.194
ELB improved by 0.305527
iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.956
ELB improved by 0.237878
iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.778
ELB improved by 0.177948
iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.649
ELB improved by 0.129216
iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.557
ELB improved by 0.0922773
iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.491
ELB improved by 0.065731
iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.444
ELB improved by 0.0473487
iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.409
ELB improved by 0.0348976
iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.382
ELB improved by 0.0265338
iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.362
ELB improved by 0.0208922
iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.345
ELB improved by 0.0170292
iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.33
ELB improved by 0.0143197
iteration 113
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.318
ELB improved by 0.0123603
iteration 114
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.307
ELB improved by 0.0108938
iteration 115
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.297
ELB improved by 0.00975741
ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
>
> proc.time()
user system elapsed
2.733 0.206 2.932
graper.Rcheck/graper-Ex.timings
| name | user | system | elapsed | |
| coef.graper | 0.042 | 0.012 | 0.054 | |
| getPIPs | 0.044 | 0.004 | 0.048 | |
| graper | 0.068 | 0.008 | 0.077 | |
| makeExampleData | 0.009 | 0.000 | 0.009 | |
| makeExampleDataWithUnequalGroups | 0.01 | 0.00 | 0.01 | |
| plotELBO | 0.423 | 0.024 | 0.448 | |
| plotGroupPenalties | 1.586 | 0.040 | 1.631 | |
| plotPosterior | 0.956 | 0.020 | 0.977 | |
| predict.graper | 0.978 | 0.028 | 1.008 | |
| print.graper | 0.035 | 0.012 | 0.048 | |