Britta Velten
| Snapshot Date: 2025-09-22 13:40 -0400 (Mon, 22 Sep 2025) |
| git_url: https://git.bioconductor.org/packages/graper |
| git_branch: RELEASE_3_21 |
| git_last_commit: fb5f237 |
| git_last_commit_date: 2025-06-24 03:18:49 -0400 (Tue, 24 Jun 2025) |
| Back to Multiple platform build/check report for BioC 3.21: simplified long |
|
This page was generated on 2025-09-25 11:40 -0400 (Thu, 25 Sep 2025).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) | x86_64 | 4.5.1 (2025-06-13) -- "Great Square Root" | 4827 |
| merida1 | macOS 12.7.5 Monterey | x86_64 | 4.5.1 RC (2025-06-05 r88288) -- "Great Square Root" | 4608 |
| kjohnson1 | macOS 13.6.6 Ventura | arm64 | 4.5.1 Patched (2025-06-14 r88325) -- "Great Square Root" | 4549 |
| kunpeng2 | Linux (openEuler 24.03 LTS) | aarch64 | R Under development (unstable) (2025-02-19 r87757) -- "Unsuffered Consequences" | 4581 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 915/2341 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| graper 1.24.2 (landing page) Britta Velten
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | | ||||||||
| merida1 | macOS 12.7.5 Monterey / x86_64 | OK | OK | OK | OK | | ||||||||
| kjohnson1 | macOS 13.6.6 Ventura / arm64 | OK | OK | OK | OK | | ||||||||
| kunpeng2 | Linux (openEuler 24.03 LTS) / aarch64 | OK | OK | OK | ||||||||||
|
To the developers/maintainers of the graper package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: graper |
| Version: 1.24.2 |
| Command: /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:graper.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings graper_1.24.2.tar.gz |
| StartedAt: 2025-09-23 23:11:04 -0400 (Tue, 23 Sep 2025) |
| EndedAt: 2025-09-23 23:12:22 -0400 (Tue, 23 Sep 2025) |
| EllapsedTime: 77.5 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: graper.Rcheck |
| Warnings: 0 |
##############################################################################
##############################################################################
###
### Running command:
###
### /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:graper.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings graper_1.24.2.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/Users/biocbuild/bbs-3.21-bioc/meat/graper.Rcheck’
* using R version 4.5.1 Patched (2025-06-14 r88325)
* using platform: aarch64-apple-darwin20
* R was compiled by
Apple clang version 16.0.0 (clang-1600.0.26.6)
GNU Fortran (GCC) 14.2.0
* running under: macOS Ventura 13.7.5
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.24.2’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* used C++ compiler: ‘Apple clang version 15.0.0 (clang-1500.0.40.1)’
* used SDK: ‘MacOSX11.3.sdk’
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... NOTE
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘testthat.R’
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE
Status: 2 NOTEs
See
‘/Users/biocbuild/bbs-3.21-bioc/meat/graper.Rcheck/00check.log’
for details.
graper.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL graper ### ############################################################################## ############################################################################## * installing to library ‘/Library/Frameworks/R.framework/Versions/4.5-arm64/Resources/library’ * installing *source* package ‘graper’ ... ** this is package ‘graper’ version ‘1.24.2’ ** using staged installation ** libs using C++ compiler: ‘Apple clang version 15.0.0 (clang-1500.0.40.1)’ using SDK: ‘MacOSX11.3.sdk’ clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Library/Frameworks/R.framework/Versions/4.5-arm64/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.5-arm64/Resources/library/RcppArmadillo/include' -I'/Library/Frameworks/R.framework/Versions/4.5-arm64/Resources/library/BH/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Library/Frameworks/R.framework/Versions/4.5-arm64/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.5-arm64/Resources/library/RcppArmadillo/include' -I'/Library/Frameworks/R.framework/Versions/4.5-arm64/Resources/library/BH/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c fit_graper.cpp -o fit_graper.o clang++ -arch arm64 -std=gnu++17 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/arm64/lib -o graper.so RcppExports.o fit_graper.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/opt/gfortran/lib/gcc/aarch64-apple-darwin20.0/14.2.0 -L/opt/gfortran/lib -lemutls_w -lheapt_w -lgfortran -lquadmath -F/Library/Frameworks/R.framework/.. -framework R installing to /Library/Frameworks/R.framework/Versions/4.5-arm64/Resources/library/00LOCK-graper/00new/graper/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (graper)
graper.Rcheck/tests/testthat.Rout
R version 4.5.1 Patched (2025-06-14 r88325) -- "Great Square Root"
Copyright (C) 2025 The R Foundation for Statistical Computing
Platform: aarch64-apple-darwin20
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(testthat)
> library(graper)
>
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-904.002
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-587.828
ELB improved by 316.174
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-528.786
ELB improved by 59.0416
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-493.475
ELB improved by 35.3112
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-478.584
ELB improved by 14.891
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-471.695
ELB improved by 6.88832
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-467.122
ELB improved by 4.57389
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-463.146
ELB improved by 3.97583
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-459.263
ELB improved by 3.88254
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-455.324
ELB improved by 3.93881
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-451.314
ELB improved by 4.01002
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.366
ELB improved by 3.94785
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.785
ELB improved by 3.58155
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.895
ELB improved by 2.8895
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.813
ELB improved by 2.08256
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.412
ELB improved by 1.40107
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.48
ELB improved by 0.931677
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.838
ELB improved by 0.642085
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.366
ELB improved by 0.471772
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.995
ELB improved by 0.371146
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.687
ELB improved by 0.30787
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.423
ELB improved by 0.263873
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.193
ELB improved by 0.230664
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.988
ELB improved by 0.205002
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.802
ELB improved by 0.185739
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.63
ELB improved by 0.17225
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.466
ELB improved by 0.164025
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.305
ELB improved by 0.160573
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.144
ELB improved by 0.161122
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.98
ELB improved by 0.164122
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.813
ELB improved by 0.167106
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.645
ELB improved by 0.167604
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.481
ELB improved by 0.164391
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.323
ELB improved by 0.157487
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.176
ELB improved by 0.147294
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.042
ELB improved by 0.134126
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.924
ELB improved by 0.118241
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.823
ELB improved by 0.100424
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.741
ELB improved by 0.0825311
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.674
ELB improved by 0.0667677
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.62
ELB improved by 0.0543866
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.574
ELB improved by 0.0453353
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.535
ELB improved by 0.0388527
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.501
ELB improved by 0.0341077
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.471
ELB improved by 0.0304764
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.443
ELB improved by 0.0275615
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.418
ELB improved by 0.0251275
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.395
ELB improved by 0.0230366
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.374
ELB improved by 0.0212059
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.354
ELB improved by 0.0195829
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.336
ELB improved by 0.0181318
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.319
ELB improved by 0.0168269
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.304
ELB improved by 0.0156483
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.289
ELB improved by 0.0145802
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.275
ELB improved by 0.0136097
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.263
ELB improved by 0.0127257
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.251
ELB improved by 0.0119189
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.24
ELB improved by 0.0111811
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.229
ELB improved by 0.0105053
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.219
ELB improved by 0.00988522
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-893.031
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-574.052
ELB improved by 318.979
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-514.375
ELB improved by 59.677
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-482.411
ELB improved by 31.9638
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-468.124
ELB improved by 14.287
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-461.331
ELB improved by 6.79371
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-456.749
ELB improved by 4.58116
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-452.832
ELB improved by 3.91733
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.153
ELB improved by 3.67877
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.52
ELB improved by 3.63344
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.866
ELB improved by 3.65366
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.22
ELB improved by 3.64665
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.681
ELB improved by 3.53853
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.407
ELB improved by 3.2738
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.558
ELB improved by 2.84919
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.225
ELB improved by 2.33286
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.402
ELB improved by 1.82347
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.009
ELB improved by 1.39311
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.943
ELB improved by 1.06519
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.12
ELB improved by 0.823058
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.482
ELB improved by 0.638577
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.985
ELB improved by 0.496532
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.594
ELB improved by 0.390994
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.279
ELB improved by 0.31491
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.019
ELB improved by 0.259961
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.8
ELB improved by 0.219232
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.612
ELB improved by 0.187967
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.449
ELB improved by 0.16314
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.306
ELB improved by 0.142874
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.18
ELB improved by 0.125986
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.068
ELB improved by 0.111705
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.969
ELB improved by 0.0995056
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.88
ELB improved by 0.0890094
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.8
ELB improved by 0.0799307
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.728
ELB improved by 0.0720456
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.663
ELB improved by 0.0651737
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.604
ELB improved by 0.0591666
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.55
ELB improved by 0.0539008
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.5
ELB improved by 0.0492729
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.455
ELB improved by 0.0451954
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.414
ELB improved by 0.0415944
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.375
ELB improved by 0.0384072
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.34
ELB improved by 0.0355805
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.307
ELB improved by 0.0330686
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.276
ELB improved by 0.0308329
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.247
ELB improved by 0.0288401
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.22
ELB improved by 0.0270618
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.194
ELB improved by 0.0254737
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.17
ELB improved by 0.0240547
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.148
ELB improved by 0.022787
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.126
ELB improved by 0.0216552
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.105
ELB improved by 0.020646
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.085
ELB improved by 0.0197483
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.067
ELB improved by 0.0189526
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.048
ELB improved by 0.018251
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.031
ELB improved by 0.0176369
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.014
ELB improved by 0.0171054
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.997
ELB improved by 0.0166526
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.981
ELB improved by 0.0162761
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.965
ELB improved by 0.0159751
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.949
ELB improved by 0.0157502
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.933
ELB improved by 0.0156037
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.918
ELB improved by 0.01554
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.902
ELB improved by 0.0155662
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.886
ELB improved by 0.0156921
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.871
ELB improved by 0.0159316
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.854
ELB improved by 0.0163028
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.837
ELB improved by 0.0168296
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.82
ELB improved by 0.0175421
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.801
ELB improved by 0.0184775
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.782
ELB improved by 0.0196788
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.761
ELB improved by 0.021192
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.737
ELB improved by 0.0230582
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.712
ELB improved by 0.0252994
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.684
ELB improved by 0.0278967
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.653
ELB improved by 0.0307659
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.62
ELB improved by 0.0337414
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.583
ELB improved by 0.0365899
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.544
ELB improved by 0.0390647
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.503
ELB improved by 0.0409843
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.461
ELB improved by 0.0422897
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.418
ELB improved by 0.0430398
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.374
ELB improved by 0.043355
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.331
ELB improved by 0.0433543
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.288
ELB improved by 0.0431218
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.245
ELB improved by 0.0427054
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.203
ELB improved by 0.0421317
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.162
ELB improved by 0.0414204
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.121
ELB improved by 0.0405932
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.081
ELB improved by 0.0396767
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.043
ELB improved by 0.0387009
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.005
ELB improved by 0.0376975
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.968
ELB improved by 0.0366966
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.933
ELB improved by 0.0357252
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.898
ELB improved by 0.0348057
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.864
ELB improved by 0.0339555
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.831
ELB improved by 0.033187
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.798
ELB improved by 0.0325077
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.766
ELB improved by 0.031921
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.735
ELB improved by 0.0314263
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.704
ELB improved by 0.0310192
iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.673
ELB improved by 0.0306919
iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.643
ELB improved by 0.0304324
iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.612
ELB improved by 0.0302249
iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.582
ELB improved by 0.0300495
iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.553
ELB improved by 0.0298828
iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.523
ELB improved by 0.0296992
iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.493
ELB improved by 0.0294741
iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.464
ELB improved by 0.0291873
iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.435
ELB improved by 0.0288272
iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.407
ELB improved by 0.0283938
iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.379
ELB improved by 0.0278982
iteration 113
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.352
ELB improved by 0.0273605
iteration 114
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.325
ELB improved by 0.0268041
iteration 115
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.299
ELB improved by 0.026251
iteration 116
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.273
ELB improved by 0.0257175
iteration 117
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.248
ELB improved by 0.0252128
iteration 118
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.223
ELB improved by 0.0247396
iteration 119
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.199
ELB improved by 0.0242955
iteration 120
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.175
ELB improved by 0.0238751
iteration 121
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.151
ELB improved by 0.0234712
iteration 122
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.128
ELB improved by 0.0230766
iteration 123
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.106
ELB improved by 0.0226843
iteration 124
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.083
ELB improved by 0.0222885
iteration 125
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.061
ELB improved by 0.0218843
iteration 126
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.04
ELB improved by 0.0214682
iteration 127
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.019
ELB improved by 0.021038
iteration 128
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.998
ELB improved by 0.0205927
iteration 129
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.978
ELB improved by 0.0201325
iteration 130
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.958
ELB improved by 0.0196587
iteration 131
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.939
ELB improved by 0.0191736
iteration 132
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.921
ELB improved by 0.0186808
iteration 133
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.902
ELB improved by 0.0181845
iteration 134
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.885
ELB improved by 0.0176903
iteration 135
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.868
ELB improved by 0.0172044
iteration 136
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.851
ELB improved by 0.0167344
iteration 137
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.835
ELB improved by 0.0162887
iteration 138
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.819
ELB improved by 0.0158766
iteration 139
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.803
ELB improved by 0.015508
iteration 140
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.788
ELB improved by 0.0151922
iteration 141
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.773
ELB improved by 0.0149371
iteration 142
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.758
ELB improved by 0.0147461
iteration 143
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.744
ELB improved by 0.0146146
iteration 144
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.729
ELB improved by 0.0145263
iteration 145
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.715
ELB improved by 0.0144487
iteration 146
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.7
ELB improved by 0.0143321
iteration 147
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.686
ELB improved by 0.014114
iteration 148
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.672
ELB improved by 0.0137304
iteration 149
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.659
ELB improved by 0.0131335
iteration 150
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.647
ELB improved by 0.0123088
iteration 151
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.636
ELB improved by 0.0112838
iteration 152
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.626
ELB improved by 0.0101225
iteration 153
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.617
ELB improved by 0.00890819
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-864.444
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-586.82
ELB improved by 277.624
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-521.934
ELB improved by 64.8854
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-478.089
ELB improved by 43.8453
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-458.502
ELB improved by 19.5868
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.999
ELB improved by 8.50352
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.411
ELB improved by 5.58777
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.361
ELB improved by 5.0497
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.158
ELB improved by 5.20336
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.488
ELB improved by 5.66994
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.309
ELB improved by 6.17937
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.044
ELB improved by 6.26427
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.549
ELB improved by 5.4956
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.455
ELB improved by 4.09362
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.72
ELB improved by 2.73553
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.935
ELB improved by 1.7851
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.713
ELB improved by 1.22112
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.809
ELB improved by 0.904086
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.094
ELB improved by 0.715239
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.512
ELB improved by 0.58186
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.041
ELB improved by 0.470988
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.666
ELB improved by 0.375635
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.368
ELB improved by 0.297312
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.132
ELB improved by 0.236204
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.942
ELB improved by 0.190086
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.786
ELB improved by 0.155771
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.656
ELB improved by 0.130128
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.546
ELB improved by 0.110586
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.45
ELB improved by 0.0952778
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.367
ELB improved by 0.0829529
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.295
ELB improved by 0.0728019
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.23
ELB improved by 0.0642966
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.173
ELB improved by 0.0570798
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.122
ELB improved by 0.050898
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.077
ELB improved by 0.0455634
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.036
ELB improved by 0.0409318
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.999
ELB improved by 0.0368896
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.966
ELB improved by 0.0333457
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.935
ELB improved by 0.0302258
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.908
ELB improved by 0.027469
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.883
ELB improved by 0.0250249
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.86
ELB improved by 0.0228511
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.839
ELB improved by 0.0209122
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.82
ELB improved by 0.0191781
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.802
ELB improved by 0.0176234
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.786
ELB improved by 0.0162263
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.771
ELB improved by 0.0149681
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.757
ELB improved by 0.0138325
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.744
ELB improved by 0.0128058
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.733
ELB improved by 0.0118757
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.721
ELB improved by 0.0110317
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.711
ELB improved by 0.0102647
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.702
ELB improved by 0.00956634
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-848.428
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-548.276
ELB improved by 300.152
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-483.267
ELB improved by 65.0097
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.344
ELB improved by 40.9224
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.938
ELB improved by 18.4061
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.113
ELB improved by 8.82558
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.356
ELB improved by 5.75696
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.796
ELB improved by 4.55952
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.602
ELB improved by 4.19379
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.323
ELB improved by 4.279
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.732
ELB improved by 4.59146
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.818
ELB improved by 4.91443
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.855
ELB improved by 4.96259
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.374
ELB improved by 4.4805
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.869
ELB improved by 3.50494
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-371.464
ELB improved by 2.40546
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-369.928
ELB improved by 1.53579
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-368.945
ELB improved by 0.982808
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-368.282
ELB improved by 0.663239
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-367.804
ELB improved by 0.478025
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-367.44
ELB improved by 0.364569
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-367.149
ELB improved by 0.290512
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-366.91
ELB improved by 0.239519
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-366.707
ELB improved by 0.202871
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-366.531
ELB improved by 0.175582
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-366.376
ELB improved by 0.154647
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-366.238
ELB improved by 0.138183
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-366.113
ELB improved by 0.124984
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-365.999
ELB improved by 0.114273
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-365.893
ELB improved by 0.105562
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-365.795
ELB improved by 0.0985782
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-365.702
ELB improved by 0.0932351
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-365.612
ELB improved by 0.0896517
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-365.524
ELB improved by 0.0882259
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-365.434
ELB improved by 0.0897897
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-365.338
ELB improved by 0.0958516
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-365.229
ELB improved by 0.108744
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-365.099
ELB improved by 0.130813
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-364.938
ELB improved by 0.160839
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-364.749
ELB improved by 0.189061
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-364.547
ELB improved by 0.201201
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-364.356
ELB improved by 0.191584
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-364.189
ELB improved by 0.166933
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-364.049
ELB improved by 0.139962
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-363.93
ELB improved by 0.119052
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-363.825
ELB improved by 0.10482
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-363.73
ELB improved by 0.0949167
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-363.643
ELB improved by 0.0874738
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-363.561
ELB improved by 0.0815291
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-363.485
ELB improved by 0.0766286
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-363.412
ELB improved by 0.0725358
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-363.343
ELB improved by 0.0691041
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-363.277
ELB improved by 0.0662293
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-363.213
ELB improved by 0.0638317
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-363.151
ELB improved by 0.0618503
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-363.091
ELB improved by 0.0602381
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-363.032
ELB improved by 0.0589583
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-362.974
ELB improved by 0.0579795
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-362.917
ELB improved by 0.0572671
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-362.86
ELB improved by 0.0567719
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-362.803
ELB improved by 0.0564139
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-362.747
ELB improved by 0.0560661
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-362.692
ELB improved by 0.0555465
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-362.637
ELB improved by 0.0546339
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-362.584
ELB improved by 0.0531189
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-362.533
ELB improved by 0.0508787
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-362.485
ELB improved by 0.0479379
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-362.441
ELB improved by 0.0444674
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-362.4
ELB improved by 0.040721
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-362.363
ELB improved by 0.0369492
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-362.33
ELB improved by 0.0333406
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-362.3
ELB improved by 0.0300062
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-362.273
ELB improved by 0.0269922
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-362.248
ELB improved by 0.0243022
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-362.227
ELB improved by 0.0219165
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-362.207
ELB improved by 0.0198058
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-362.189
ELB improved by 0.0179381
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-362.172
ELB improved by 0.016283
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-362.158
ELB improved by 0.0148133
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-362.144
ELB improved by 0.0135051
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-362.132
ELB improved by 0.0123377
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-362.121
ELB improved by 0.0112935
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-362.11
ELB improved by 0.0103573
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-362.101
ELB improved by 0.00951616
ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
>
> proc.time()
user system elapsed
3.066 0.267 3.320
graper.Rcheck/graper-Ex.timings
| name | user | system | elapsed | |
| coef.graper | 0.052 | 0.012 | 0.066 | |
| getPIPs | 0.051 | 0.008 | 0.060 | |
| graper | 0.088 | 0.016 | 0.106 | |
| makeExampleData | 0.006 | 0.001 | 0.007 | |
| makeExampleDataWithUnequalGroups | 0.005 | 0.000 | 0.007 | |
| plotELBO | 0.338 | 0.018 | 0.362 | |
| plotGroupPenalties | 1.326 | 0.046 | 1.386 | |
| plotPosterior | 0.621 | 0.027 | 0.653 | |
| predict.graper | 2.973 | 0.074 | 3.063 | |
| print.graper | 0.082 | 0.015 | 0.097 | |