| Back to Multiple platform build/check report for BioC 3.21: simplified long |
|
This page was generated on 2025-08-18 11:41 -0400 (Mon, 18 Aug 2025).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) | x86_64 | 4.5.1 (2025-06-13) -- "Great Square Root" | 4824 |
| palomino7 | Windows Server 2022 Datacenter | x64 | 4.5.1 (2025-06-13 ucrt) -- "Great Square Root" | 4566 |
| merida1 | macOS 12.7.5 Monterey | x86_64 | 4.5.1 RC (2025-06-05 r88288) -- "Great Square Root" | 4604 |
| kjohnson1 | macOS 13.6.6 Ventura | arm64 | 4.5.1 Patched (2025-06-14 r88325) -- "Great Square Root" | 4545 |
| kunpeng2 | Linux (openEuler 24.03 LTS) | aarch64 | R Under development (unstable) (2025-02-19 r87757) -- "Unsuffered Consequences" | 4579 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 515/2341 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| DAPAR 1.40.0 (landing page) Samuel Wieczorek
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | |||||||||
| palomino7 | Windows Server 2022 Datacenter / x64 | OK | OK | OK | OK | |||||||||
| merida1 | macOS 12.7.5 Monterey / x86_64 | OK | OK | OK | OK | |||||||||
| kjohnson1 | macOS 13.6.6 Ventura / arm64 | OK | OK | OK | OK | |||||||||
| kunpeng2 | Linux (openEuler 24.03 LTS) / aarch64 | OK | OK | OK | ||||||||||
|
To the developers/maintainers of the DAPAR package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/DAPAR.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: DAPAR |
| Version: 1.40.0 |
| Command: E:\biocbuild\bbs-3.21-bioc\R\bin\R.exe CMD check --no-multiarch --install=check:DAPAR.install-out.txt --library=E:\biocbuild\bbs-3.21-bioc\R\library --no-vignettes --timings DAPAR_1.40.0.tar.gz |
| StartedAt: 2025-08-15 01:12:51 -0400 (Fri, 15 Aug 2025) |
| EndedAt: 2025-08-15 01:23:33 -0400 (Fri, 15 Aug 2025) |
| EllapsedTime: 641.8 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: DAPAR.Rcheck |
| Warnings: 0 |
##############################################################################
##############################################################################
###
### Running command:
###
### E:\biocbuild\bbs-3.21-bioc\R\bin\R.exe CMD check --no-multiarch --install=check:DAPAR.install-out.txt --library=E:\biocbuild\bbs-3.21-bioc\R\library --no-vignettes --timings DAPAR_1.40.0.tar.gz
###
##############################################################################
##############################################################################
* using log directory 'E:/biocbuild/bbs-3.21-bioc/meat/DAPAR.Rcheck'
* using R version 4.5.1 (2025-06-13 ucrt)
* using platform: x86_64-w64-mingw32
* R was compiled by
gcc.exe (GCC) 14.2.0
GNU Fortran (GCC) 14.2.0
* running under: Windows Server 2022 x64 (build 20348)
* using session charset: UTF-8
* using option '--no-vignettes'
* checking for file 'DAPAR/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'DAPAR' version '1.40.0'
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... INFO
Vignette dependency required without any vignettes: 'knitr'
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'DAPAR' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking whether startup messages can be suppressed ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
Check_Dataset_Validity: no visible global function definition for
'exprs'
OWAnova: no visible global function definition for 'aov'
aggregateIterParallel: no visible binding for global variable 'cond'
averageIntensities: no visible binding for global variable 'condition'
averageIntensities: no visible binding for global variable 'feature'
averageIntensities: no visible binding for global variable 'intensity'
createMSnset: no visible global function definition for
'installed.packages'
createMSnset: no visible binding for global variable 'Prostar.loc'
createMSnset2: no visible global function definition for
'installed.packages'
createMSnset2: no visible binding for global variable 'Prostar.loc'
diffAnaVolcanoplot_rCharts: no visible binding for global variable 'x'
diffAnaVolcanoplot_rCharts: no visible binding for global variable 'y'
diffAnaVolcanoplot_rCharts: no visible binding for global variable 'g'
display.CC.visNet: no visible binding for global variable
'layout_nicely'
getTextForGOAnalysis: no visible binding for global variable
'textGOParams'
getTextForGOAnalysis: no visible binding for global variable 'input'
globalAdjPval: no visible global function definition for 'stack'
heatmapForMissingValues: no visible binding for global variable 'par'
limmaCompleteTest: no visible binding for global variable 'A'
limmaCompleteTest: no visible binding for global variable 'B'
limmaCompleteTest: no visible binding for global variable 'P.Value'
pepa.test: no visible global function definition for 'nodes<-'
testAnovaModels : <anonymous>: no visible global function definition
for 'TukeyHSD'
visualizeClusters: no visible binding for global variable
'adjusted_pvalues'
visualizeClusters: no visible binding for global variable 'Condition'
visualizeClusters: no visible binding for global variable 'Intensity'
visualizeClusters: no visible binding for global variable
'FDR_threshold'
visualizeClusters: no visible binding for global variable 'feature'
wrapperClassic1wayAnova: no visible binding for global variable
'Pr(>F)1'
wrapperRunClustering: no visible global function definition for 'str_c'
Undefined global functions or variables:
A B Condition FDR_threshold Intensity P.Value Pr(>F)1 Prostar.loc
TukeyHSD adjusted_pvalues aov cond condition exprs feature g input
installed.packages intensity layout_nicely nodes<- par stack str_c
textGOParams x y
Consider adding
importFrom("graphics", "par")
importFrom("stats", "TukeyHSD", "aov")
importFrom("utils", "installed.packages", "stack")
to your NAMESPACE file.
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking examples ... OK
Examples with CPU (user + system) or elapsed time > 5s
user system elapsed
wrapper.compareNormalizationD_HC 33.63 0.93 34.80
wrapper.dapar.impute.mi 31.62 0.46 32.30
barplotEnrichGO_HC 8.29 0.95 11.20
scatterplotEnrichGO_HC 5.22 0.36 5.58
barplotGroupGO_HC 4.83 0.47 5.34
group_GO 4.87 0.34 5.27
CVDistD_HC 3.69 0.19 10.19
display.CC.visNet 1.99 0.02 5.04
* checking for unstated dependencies in 'tests' ... OK
* checking tests ...
Running 'testthat.R'
OK
* checking PDF version of manual ... OK
* DONE
Status: 1 NOTE
See
'E:/biocbuild/bbs-3.21-bioc/meat/DAPAR.Rcheck/00check.log'
for details.
DAPAR.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### E:\biocbuild\bbs-3.21-bioc\R\bin\R.exe CMD INSTALL DAPAR ### ############################################################################## ############################################################################## * installing to library 'E:/biocbuild/bbs-3.21-bioc/R/library' * installing *source* package 'DAPAR' ... ** this is package 'DAPAR' version '1.40.0' ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (DAPAR)
DAPAR.Rcheck/tests/testthat.Rout
R version 4.5.1 (2025-06-13 ucrt) -- "Great Square Root"
Copyright (C) 2025 The R Foundation for Statistical Computing
Platform: x86_64-w64-mingw32/x64
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(testthat)
> library(DAPAR)
This is the 'DAPAR' version 1.40.0.
To get started, visit
http://www.prostar-proteomics.org/
>
> test_check("DAPAR")
Iterations:
1 / 1 - Imputation MNAR OK -
Imputation MCAR in progress -
3 % - 6 % - 9 % - 12 % - 15 % - 18 % - 21 % - 24 % - 27 % - 30 % - 33 % - 36 % - 39 % - 42 % - 45 % - 48 % - 51 % - 54 % - 57 % - 60 % - 63 % - 66 % - 69 % - 72 % - 75 % - 78 % - 81 % - 84 % - 87 % - 90 % - 93 % - 96 % - 99 % -
Iterations:
1 / 1 - Imputation MNAR OK -
Imputation MCAR in progress -
3 % - 6 % - 9 % - 12 % - 15 % - 18 % - 21 % - 24 % - 27 % - 30 % - 33 % - 36 % - 39 % - 42 % - 45 % - 48 % - 51 % - 54 % - 57 % - 60 % - 63 % - 66 % - 69 % - 72 % - 75 % - 78 % - 81 % - 84 % - 87 % - 90 % - 93 % - 96 % - 99 % -
Imputation in condition 1 ...
In progress: 10 % - 20 % - 30 % - 40 % - 50 % - 60 % - 70 % - 80 % - 90 % - 100 % -
Imputation in condition 2 ...
In progress: 10 % - 20 % - 30 % - 40 % - 50 % - 60 % - 70 % - 80 % - 90 % - 100 % - [ FAIL 0 | WARN 17 | SKIP 0 | PASS 66 ]
[ FAIL 0 | WARN 17 | SKIP 0 | PASS 66 ]
>
> proc.time()
user system elapsed
57.98 2.23 61.76
DAPAR.Rcheck/DAPAR-Ex.timings
| name | user | system | elapsed | |
| AggregateMetacell | 0.55 | 0.10 | 0.66 | |
| BuildAdjacencyMatrix | 0.45 | 0.05 | 0.50 | |
| BuildColumnToProteinDataset | 0.63 | 0.02 | 0.64 | |
| BuildMetaCell | 0.76 | 0.06 | 0.86 | |
| CVDistD_HC | 3.69 | 0.19 | 10.19 | |
| Children | 0 | 0 | 0 | |
| CountPep | 0.48 | 0.01 | 0.50 | |
| ExtendPalette | 0.02 | 0.02 | 0.03 | |
| GOAnalysisSave | 0 | 0 | 0 | |
| GetCC | 2.76 | 0.12 | 2.99 | |
| GetColorsForConditions | 0.54 | 0.00 | 0.53 | |
| GetDetailedNbPeptides | 0.39 | 0.03 | 0.42 | |
| GetDetailedNbPeptidesUsed | 0 | 0 | 0 | |
| GetIndices_BasedOnConditions | 0.43 | 0.00 | 0.44 | |
| GetIndices_MetacellFiltering | 0.36 | 0.04 | 0.39 | |
| GetIndices_WholeLine | 0.38 | 0.00 | 0.37 | |
| GetIndices_WholeMatrix | 0.37 | 0.01 | 0.39 | |
| GetKeyId | 0.41 | 0.00 | 0.41 | |
| GetMatAdj | 0.44 | 0.03 | 0.47 | |
| GetMetacell | 0 | 0 | 0 | |
| GetMetacellTags | 0.45 | 0.00 | 0.45 | |
| GetNbPeptidesUsed | 0.45 | 0.00 | 0.45 | |
| GetNbTags | 0 | 0 | 0 | |
| GetSoftAvailables | 0 | 0 | 0 | |
| GetTypeofData | 0.44 | 0.00 | 0.44 | |
| Get_AllComparisons | 0.28 | 0.04 | 0.34 | |
| GlobalQuantileAlignment | 0.52 | 0.02 | 0.53 | |
| GraphPepProt | 0.34 | 0.03 | 0.38 | |
| LH0 | 0 | 0 | 0 | |
| LH0.lm | 0 | 0 | 0 | |
| LH1 | 0 | 0 | 0 | |
| LH1.lm | 0 | 0 | 0 | |
| LOESS | 1.14 | 0.03 | 1.17 | |
| MeanCentering | 0.45 | 0.02 | 0.47 | |
| MetaCellFiltering | 0.61 | 0.00 | 0.61 | |
| MetacellFilteringScope | 0 | 0 | 0 | |
| Metacell_DIA_NN | 0.75 | 0.03 | 0.78 | |
| Metacell_generic | 0.64 | 0.03 | 0.67 | |
| Metacell_maxquant | 0.63 | 0.02 | 0.64 | |
| Metacell_proline | 0.62 | 0.04 | 0.67 | |
| NumericalFiltering | 0.36 | 0.02 | 0.38 | |
| NumericalgetIndicesOfLinesToRemove | 0.44 | 0.01 | 0.46 | |
| OWAnova | 0.01 | 0.00 | 0.01 | |
| QuantileCentering | 0.42 | 0.00 | 0.42 | |
| SetCC | 2.58 | 0.05 | 2.63 | |
| SetMatAdj | 0.38 | 0.00 | 0.37 | |
| Set_POV_MEC_tags | 0.36 | 0.00 | 0.36 | |
| StringBasedFiltering | 0.54 | 0.05 | 0.60 | |
| StringBasedFiltering2 | 0.41 | 0.00 | 0.40 | |
| SumByColumns | 1.08 | 0.01 | 1.10 | |
| SymFilteringOperators | 0 | 0 | 0 | |
| UpdateMetacellAfterImputation | 0.36 | 0.00 | 0.64 | |
| aggregateIter | 0.48 | 0.00 | 0.48 | |
| aggregateIterParallel | 0 | 0 | 0 | |
| aggregateMean | 0.41 | 0.00 | 0.42 | |
| aggregateSum | 0.48 | 0.00 | 0.49 | |
| aggregateTopn | 0.50 | 0.02 | 0.51 | |
| applyAnovasOnProteins | 0.13 | 0.00 | 0.13 | |
| averageIntensities | 0.58 | 0.17 | 0.75 | |
| barplotEnrichGO_HC | 8.29 | 0.95 | 11.20 | |
| barplotGroupGO_HC | 4.83 | 0.47 | 5.34 | |
| boxPlotD_HC | 0.32 | 0.10 | 0.46 | |
| buildGraph | 1.97 | 0.01 | 1.98 | |
| check.conditions | 0.46 | 0.02 | 0.47 | |
| check.design | 0.45 | 0.00 | 0.45 | |
| checkClusterability | 1.89 | 0.14 | 2.10 | |
| classic1wayAnova | 0 | 0 | 0 | |
| compareNormalizationD_HC | 0.17 | 0.11 | 0.29 | |
| compute.selection.table | 0.81 | 0.05 | 0.99 | |
| compute_t_tests | 1.05 | 0.06 | 1.14 | |
| corrMatrixD_HC | 0.61 | 0.08 | 0.68 | |
| createMSnset | 2.78 | 0.06 | 2.85 | |
| createMSnset2 | 2.52 | 0.03 | 2.55 | |
| dapar_hc_ExportMenu | 0.15 | 0.16 | 0.43 | |
| dapar_hc_chart | 0.08 | 0.07 | 0.17 | |
| deleteLinesFromIndices | 0.48 | 0.02 | 0.50 | |
| densityPlotD_HC | 2.10 | 0.20 | 2.39 | |
| diffAnaComputeAdjustedPValues | 0.18 | 0.02 | 0.20 | |
| diffAnaComputeFDR | 0 | 0 | 0 | |
| diffAnaGetSignificant | 0.32 | 0.00 | 0.32 | |
| diffAnaSave | 0.23 | 0.00 | 0.23 | |
| diffAnaVolcanoplot | 0.20 | 0.01 | 0.24 | |
| diffAnaVolcanoplot_rCharts | 0.36 | 0.11 | 0.56 | |
| display.CC.visNet | 1.99 | 0.02 | 5.04 | |
| enrich_GO | 4.48 | 0.34 | 4.83 | |
| finalizeAggregation | 0 | 0 | 0 | |
| findMECBlock | 0.40 | 0.07 | 0.47 | |
| formatHSDResults | 0 | 0 | 0 | |
| formatLimmaResult | 0.18 | 0.01 | 0.18 | |
| formatPHResults | 0 | 0 | 0 | |
| formatPHTResults | 0 | 0 | 0 | |
| fudge2LRT | 0 | 0 | 0 | |
| get.pep.prot.cc | 1.75 | 0.06 | 1.82 | |
| getDesignLevel | 0.44 | 0.00 | 0.44 | |
| getIndicesConditions | 0.47 | 0.02 | 0.48 | |
| getIndicesOfLinesToRemove | 0.50 | 0.01 | 0.52 | |
| getListNbValuesInLines | 0.47 | 0.04 | 0.50 | |
| getNumberOf | 0.50 | 0.01 | 0.51 | |
| getNumberOfEmptyLines | 0.49 | 0.02 | 0.50 | |
| getPourcentageOfMV | 0.51 | 0.03 | 0.55 | |
| getProcessingInfo | 0.45 | 0.01 | 0.47 | |
| getProteinsStats | 0.35 | 0.05 | 0.39 | |
| getQuantile4Imp | 0.09 | 0.02 | 0.11 | |
| getTextForAggregation | 0 | 0 | 0 | |
| getTextForAnaDiff | 0 | 0 | 0 | |
| getTextForFiltering | 0 | 0 | 0 | |
| getTextForGOAnalysis | 0 | 0 | 0 | |
| getTextForHypothesisTest | 0 | 0 | 0 | |
| getTextForNewDataset | 0 | 0 | 0 | |
| getTextForNormalization | 0 | 0 | 0 | |
| getTextForpeptideImputation | 0 | 0 | 0 | |
| getTextForproteinImputation | 0 | 0 | 0 | |
| globalAdjPval | 0.55 | 0.00 | 0.54 | |
| group_GO | 4.87 | 0.34 | 5.27 | |
| hc_logFC_DensityPlot | 0.52 | 0.06 | 0.58 | |
| hc_mvTypePlot2 | 2.11 | 0.11 | 2.22 | |
| heatmapD | 0.84 | 0.05 | 0.89 | |
| heatmapForMissingValues | 0.21 | 0.03 | 0.23 | |
| histPValue_HC | 0.25 | 0.08 | 0.36 | |
| impute.pa2 | 0.46 | 0.00 | 0.47 | |
| inner.aggregate.iter | 0.55 | 0.03 | 0.58 | |
| inner.aggregate.topn | 0.52 | 0.00 | 0.51 | |
| inner.mean | 0.45 | 0.03 | 0.49 | |
| inner.sum | 0.42 | 0.06 | 0.49 | |
| is.subset | 0 | 0 | 0 | |
| limmaCompleteTest | 1.61 | 0.01 | 1.63 | |
| listSheets | 0 | 0 | 0 | |
| make.contrast | 0.51 | 0.02 | 0.53 | |
| make.design.1 | 0.49 | 0.02 | 0.50 | |
| make.design.2 | 0.39 | 0.01 | 0.42 | |
| make.design.3 | 0.48 | 0.02 | 0.50 | |
| make.design | 0.38 | 0.01 | 0.39 | |
| match.metacell | 0.48 | 0.00 | 0.48 | |
| metacell.def | 0.02 | 0.00 | 0.02 | |
| metacellHisto_HC | 0.54 | 0.11 | 0.67 | |
| metacellPerLinesHistoPerCondition_HC | 0.77 | 0.14 | 0.95 | |
| metacellPerLinesHisto_HC | 0.70 | 0.37 | 1.14 | |
| metacombine | 0.22 | 0.00 | 0.22 | |
| mvImage | 2.58 | 0.19 | 2.77 | |
| my_hc_ExportMenu | 0.17 | 0.17 | 0.37 | |
| my_hc_chart | 0.14 | 0.14 | 0.36 | |
| nonzero | 0.03 | 0.00 | 0.03 | |
| normalizeMethods.dapar | 0 | 0 | 0 | |
| pepa.test | 0.49 | 0.02 | 0.50 | |
| pkgs.require | 0 | 0 | 0 | |
| plotJitter | 1.98 | 0.00 | 2.00 | |
| plotJitter_rCharts | 1.81 | 0.09 | 1.91 | |
| plotPCA_Eigen | 0.46 | 0.05 | 0.50 | |
| plotPCA_Eigen_hc | 0.33 | 0.05 | 0.37 | |
| plotPCA_Ind | 0.46 | 0.04 | 0.52 | |
| plotPCA_Var | 0.47 | 0.02 | 0.48 | |
| postHocTest | 0 | 0 | 0 | |
| proportionConRev_HC | 0.05 | 0.03 | 0.13 | |
| rbindMSnset | 0.56 | 0.02 | 0.58 | |
| reIntroduceMEC | 0.50 | 0.01 | 0.51 | |
| readExcel | 0 | 0 | 0 | |
| removeLines | 0.53 | 0.02 | 0.55 | |
| samLRT | 0 | 0 | 0 | |
| saveParameters | 0.42 | 0.00 | 0.42 | |
| scatterplotEnrichGO_HC | 5.22 | 0.36 | 5.58 | |
| search.metacell.tags | 0 | 0 | 0 | |
| separateAdjPval | 0.25 | 0.01 | 0.26 | |
| splitAdjacencyMat | 0.63 | 0.00 | 0.63 | |
| test.design | 0.56 | 0.02 | 0.57 | |
| testAnovaModels | 0.15 | 0.01 | 0.18 | |
| thresholdpval4fdr | 0 | 0 | 0 | |
| translatedRandomBeta | 0.02 | 0.00 | 0.01 | |
| univ_AnnotDbPkg | 0.28 | 0.03 | 0.31 | |
| violinPlotD | 0.42 | 0.02 | 0.47 | |
| visualizeClusters | 1.30 | 0.01 | 1.31 | |
| vsn | 0.92 | 0.02 | 0.93 | |
| wrapper.CVDistD_HC | 1.43 | 0.15 | 1.63 | |
| wrapper.compareNormalizationD_HC | 33.63 | 0.93 | 34.80 | |
| wrapper.corrMatrixD_HC | 0.55 | 0.07 | 0.65 | |
| wrapper.dapar.impute.mi | 31.62 | 0.46 | 32.30 | |
| wrapper.heatmapD | 0.60 | 0.07 | 0.66 | |
| wrapper.impute.KNN | 0.45 | 0.02 | 0.46 | |
| wrapper.impute.detQuant | 0.55 | 0.02 | 0.57 | |
| wrapper.impute.fixedValue | 0.53 | 0.00 | 0.53 | |
| wrapper.impute.mle | 0.39 | 0.01 | 0.40 | |
| wrapper.impute.pa | 0.14 | 0.02 | 0.16 | |
| wrapper.impute.pa2 | 0.45 | 0.03 | 0.49 | |
| wrapper.impute.slsa | 0.55 | 0.05 | 0.59 | |
| wrapper.mvImage | 0.19 | 0.00 | 0.19 | |
| wrapper.normalizeD | 0.46 | 0.03 | 0.50 | |
| wrapper.pca | 0.16 | 0.01 | 0.18 | |
| wrapperCalibrationPlot | 0.19 | 0.02 | 0.21 | |
| wrapperClassic1wayAnova | 0 | 0 | 0 | |
| wrapperRunClustering | 2.65 | 0.01 | 2.67 | |
| write.excel | 0.83 | 0.07 | 1.02 | |
| writeMSnsetToCSV | 0.54 | 0.03 | 0.73 | |
| writeMSnsetToExcel | 1.13 | 0.06 | 1.43 | |