Multiple platform build/check report for BioC 3.22 - CHECK results for graper on merida1

Hostname	OS	Arch (*)	R version	Installed pkgs
nebbiolo2	Linux (Ubuntu 24.04.3 LTS)	x86_64	4.5.2 (2025-10-31) -- "[Not] Part in a Rumble"	4882
merida1	macOS 12.7.6 Monterey	x86_64	4.5.2 (2025-10-31) -- "[Not] Part in a Rumble"	4673
kjohnson1	macOS 13.7.5 Ventura	arm64	4.5.2 Patched (2025-11-04 r88984) -- "[Not] Part in a Rumble"	4607
taishan	Linux (openEuler 24.03 LTS)	aarch64	4.5.0 (2025-04-11) -- "How About a Twenty-Six"	4671
Click on any hostname to see more info about the system (e.g. compilers) () as reported by 'uname -p', except on Windows and Mac OS X*

CHECK results for graper on merida1

To the developers/maintainers of the graper package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results

Summary

Package: graper

Version: 1.26.0

Command: /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:graper.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings graper_1.26.0.tar.gz

StartedAt: 2025-12-12 05:26:05 -0500 (Fri, 12 Dec 2025)

EndedAt: 2025-12-12 05:28:26 -0500 (Fri, 12 Dec 2025)

EllapsedTime: 140.3 seconds

RetCode: 0

Status: OK

CheckDir: graper.Rcheck

Warnings: 0

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:graper.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings graper_1.26.0.tar.gz
###
##############################################################################
##############################################################################


* using log directory ‘/Users/biocbuild/bbs-3.22-bioc/meat/graper.Rcheck’
* using R version 4.5.2 (2025-10-31)
* using platform: x86_64-apple-darwin20
* R was compiled by
    Apple clang version 14.0.0 (clang-1400.0.29.202)
    GNU Fortran (GCC) 14.2.0
* running under: macOS Monterey 12.7.6
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.26.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* used C++ compiler: ‘Apple clang version 14.0.0 (clang-1400.0.29.202)’
* used SDK: ‘MacOSX11.3.1.sdk’
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... NOTE
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
  Running ‘testthat.R’
 OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE

Status: 2 NOTEs
See
  ‘/Users/biocbuild/bbs-3.22-bioc/meat/graper.Rcheck/00check.log’
for details.

Installation output

graper.Rcheck/00install.out

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL graper
###
##############################################################################
##############################################################################


* installing to library ‘/Library/Frameworks/R.framework/Versions/4.5-x86_64/Resources/library’
* installing *source* package ‘graper’ ...
** this is package ‘graper’ version ‘1.26.0’
** using staged installation
** libs
using C++ compiler: ‘Apple clang version 14.0.0 (clang-1400.0.29.202)’
using SDK: ‘MacOSX11.3.1.sdk’
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Library/Frameworks/R.framework/Versions/4.5-x86_64/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.5-x86_64/Resources/library/RcppArmadillo/include' -I'/Library/Frameworks/R.framework/Versions/4.5-x86_64/Resources/library/BH/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c RcppExports.cpp -o RcppExports.o
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Library/Frameworks/R.framework/Versions/4.5-x86_64/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.5-x86_64/Resources/library/RcppArmadillo/include' -I'/Library/Frameworks/R.framework/Versions/4.5-x86_64/Resources/library/BH/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c fit_graper.cpp -o fit_graper.o
clang++ -arch x86_64 -std=gnu++17 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/x86_64/lib -o graper.so RcppExports.o fit_graper.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/opt/gfortran/lib/gcc/x86_64-apple-darwin20.0/14.2.0 -L/opt/gfortran/lib -lemutls_w -lheapt_w -lgfortran -lquadmath -F/Library/Frameworks/R.framework/.. -framework R
installing to /Library/Frameworks/R.framework/Versions/4.5-x86_64/Resources/library/00LOCK-graper/00new/graper/libs
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (graper)

Tests output

graper.Rcheck/tests/testthat.Rout


R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble"
Copyright (C) 2025 The R Foundation for Statistical Computing
Platform: x86_64-apple-darwin20

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> library(testthat)
> library(graper)
> 
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-861.744
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-579.514
ELB improved by 282.23

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-519.264
ELB improved by 60.2493

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-474.147
ELB improved by 45.117

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-453.197
ELB improved by 20.9507

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.702
ELB improved by 7.49471

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.742
ELB improved by 3.96044

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.652
ELB improved by 3.08925

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.87
ELB improved by 2.78208

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.232
ELB improved by 2.63783

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.706
ELB improved by 2.52679

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.315
ELB improved by 2.3907

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.112
ELB improved by 2.20335

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.146
ELB improved by 1.96531

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.444
ELB improved by 1.70201

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.993
ELB improved by 1.45138

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.75
ELB improved by 1.24275

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.667
ELB improved by 1.08316

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.706
ELB improved by 0.960966

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.85
ELB improved by 0.856296

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.099
ELB improved by 0.751109

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.459
ELB improved by 0.639168

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.932
ELB improved by 0.52752

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.504
ELB improved by 0.428302

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.155
ELB improved by 0.348427

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.868
ELB improved by 0.287454

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.626
ELB improved by 0.241726

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.419
ELB improved by 0.207461

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.237
ELB improved by 0.18166

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.075
ELB improved by 0.162108

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.928
ELB improved by 0.1472

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.792
ELB improved by 0.135792

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.665
ELB improved by 0.127073

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.544
ELB improved by 0.120472

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.429
ELB improved by 0.11559

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.317
ELB improved by 0.112139

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.207
ELB improved by 0.109914

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.098
ELB improved by 0.108765

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.989
ELB improved by 0.108579

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.88
ELB improved by 0.109276

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.769
ELB improved by 0.110793

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.656
ELB improved by 0.113089

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.54
ELB improved by 0.116135

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.42
ELB improved by 0.119916

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.296
ELB improved by 0.124428

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.166
ELB improved by 0.129676

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.03
ELB improved by 0.135673

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.888
ELB improved by 0.142435

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.738
ELB improved by 0.149978

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.58
ELB improved by 0.158307

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.412
ELB improved by 0.167411

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.235
ELB improved by 0.177247

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.047
ELB improved by 0.187728

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.848
ELB improved by 0.19871

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.638
ELB improved by 0.209984

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.417
ELB improved by 0.221273

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.185
ELB improved by 0.232243

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.942
ELB improved by 0.242528

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.691
ELB improved by 0.251768

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.431
ELB improved by 0.259656

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.165
ELB improved by 0.265972

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.894
ELB improved by 0.270588

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.621
ELB improved by 0.273441

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.347
ELB improved by 0.274463

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.073
ELB improved by 0.273505

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.803
ELB improved by 0.27032

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.538
ELB improved by 0.264648

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.282
ELB improved by 0.256406

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.036
ELB improved by 0.245851

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.802
ELB improved by 0.233573

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.582
ELB improved by 0.220243

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.376
ELB improved by 0.206271

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.184
ELB improved by 0.191594

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.008
ELB improved by 0.175863

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.849
ELB improved by 0.158983

iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.708
ELB improved by 0.141548

iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.583
ELB improved by 0.124647

iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.474
ELB improved by 0.109269

iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.378
ELB improved by 0.0959094

iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.293
ELB improved by 0.0846092

iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.218
ELB improved by 0.0751751

iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.151
ELB improved by 0.0673593

iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.09
ELB improved by 0.0609365

iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.034
ELB improved by 0.0557186

iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.983
ELB improved by 0.0515456

iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.934
ELB improved by 0.0482723

iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.889
ELB improved by 0.0457551

iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.845
ELB improved by 0.0438393

iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.802
ELB improved by 0.0423488

iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.761
ELB improved by 0.0410832

iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.721
ELB improved by 0.0398278

iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.683
ELB improved by 0.0383814

iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.646
ELB improved by 0.0365931

iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.612
ELB improved by 0.0343958

iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.58
ELB improved by 0.0318185

iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.551
ELB improved by 0.0289721

iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.525
ELB improved by 0.0260155

iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.502
ELB improved by 0.0231133

iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.482
ELB improved by 0.0204009

iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.464
ELB improved by 0.0179652

iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.448
ELB improved by 0.0158423

iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.434
ELB improved by 0.0140283

iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.421
ELB improved by 0.012494

iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.41
ELB improved by 0.0111993

iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.4
ELB improved by 0.0101029

iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.391
ELB improved by 0.00916753

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-861.754
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-555.531
ELB improved by 306.223

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-498.841
ELB improved by 56.69

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-466.901
ELB improved by 31.9391

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-452.987
ELB improved by 13.9147

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.561
ELB improved by 6.42617

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.664
ELB improved by 3.89635

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.503
ELB improved by 3.16163

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.557
ELB improved by 2.94512

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.697
ELB improved by 2.86097

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.895
ELB improved by 2.80166

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.168
ELB improved by 2.72716

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.542
ELB improved by 2.62521

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.049
ELB improved by 2.49363

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.725
ELB improved by 2.32352

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.625
ELB improved by 2.09984

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.801
ELB improved by 1.82479

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.276
ELB improved by 1.52425

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.042
ELB improved by 1.23404

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.055
ELB improved by 0.98695

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.26
ELB improved by 0.794987

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.619
ELB improved by 0.641075

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.118
ELB improved by 0.501476

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.74
ELB improved by 0.378148

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.453
ELB improved by 0.287045

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.224
ELB improved by 0.228246

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.034
ELB improved by 0.190612

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.869
ELB improved by 0.164808

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.723
ELB improved by 0.14575

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.592
ELB improved by 0.130942

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.473
ELB improved by 0.119099

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.364
ELB improved by 0.109479

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.262
ELB improved by 0.101599

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.167
ELB improved by 0.095119

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.077
ELB improved by 0.0897839

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.992
ELB improved by 0.0853987

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.91
ELB improved by 0.0818113

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.831
ELB improved by 0.0789025

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.755
ELB improved by 0.0765788

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.68
ELB improved by 0.0747671

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.606
ELB improved by 0.0734118

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.534
ELB improved by 0.0724719

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.462
ELB improved by 0.0719198

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.39
ELB improved by 0.0717404

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.318
ELB improved by 0.0719312

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.246
ELB improved by 0.0725028

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.172
ELB improved by 0.07348

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.097
ELB improved by 0.0749044

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.021
ELB improved by 0.0768375

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.941
ELB improved by 0.0793652

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.859
ELB improved by 0.0826047

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.772
ELB improved by 0.0867126

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.68
ELB improved by 0.0918966

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.582
ELB improved by 0.0984265

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.475
ELB improved by 0.106642

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.358
ELB improved by 0.116944

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.228
ELB improved by 0.129742

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.083
ELB improved by 0.145327

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.919
ELB improved by 0.163659

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.735
ELB improved by 0.184158

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.529
ELB improved by 0.205752

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.302
ELB improved by 0.22728

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.054
ELB improved by 0.24793

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.787
ELB improved by 0.267218

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.502
ELB improved by 0.284698

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.202
ELB improved by 0.299854

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.89
ELB improved by 0.312097

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.57
ELB improved by 0.320719

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.245
ELB improved by 0.324999

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.92
ELB improved by 0.324433

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.602
ELB improved by 0.318483

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.296
ELB improved by 0.305819

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.012
ELB improved by 0.284275

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.759
ELB improved by 0.252855

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.544
ELB improved by 0.214338

iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.37
ELB improved by 0.174652

iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.231
ELB improved by 0.139196

iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.12
ELB improved by 0.110472

iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.032
ELB improved by 0.0885221

iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.959
ELB improved by 0.0722558

iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.899
ELB improved by 0.0603727

iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.847
ELB improved by 0.0517604

iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.802
ELB improved by 0.0456062

iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.76
ELB improved by 0.0413922

iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.721
ELB improved by 0.0388674

iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.683
ELB improved by 0.0380483

iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.644
ELB improved by 0.0392919

iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.6
ELB improved by 0.0435048

iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.548
ELB improved by 0.0526111

iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.477
ELB improved by 0.0704398

iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.374
ELB improved by 0.103775

iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.213
ELB improved by 0.16059

iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.977
ELB improved by 0.236468

iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.683
ELB improved by 0.293871

iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.394
ELB improved by 0.288928

iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.163
ELB improved by 0.230948

iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.999
ELB improved by 0.163314

iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.888
ELB improved by 0.111599

iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.81
ELB improved by 0.0780766

iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.752
ELB improved by 0.0573858

iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.708
ELB improved by 0.0447422

iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.67
ELB improved by 0.0372355

iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.637
ELB improved by 0.0332859

iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.605
ELB improved by 0.0321224

iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.572
ELB improved by 0.0335041

iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.534
ELB improved by 0.0375777

iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.489
ELB improved by 0.0447269

iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.434
ELB improved by 0.055165

iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.366
ELB improved by 0.0678738

iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.287
ELB improved by 0.0790107

iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.205
ELB improved by 0.0822976

iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.13
ELB improved by 0.0744703

iteration 113
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.071
ELB improved by 0.0598287

iteration 114
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.025
ELB improved by 0.045405

iteration 115
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.991
ELB improved by 0.0344853

iteration 116
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.964
ELB improved by 0.0267327

iteration 117
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.943
ELB improved by 0.020923

iteration 118
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.927
ELB improved by 0.016285

iteration 119
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.914
ELB improved by 0.0125424

iteration 120
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.905
ELB improved by 0.00961472

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-865.278
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-562.514
ELB improved by 302.764

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-503.802
ELB improved by 58.712

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-466.909
ELB improved by 36.8937

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-451.655
ELB improved by 15.2536

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.971
ELB improved by 5.68446

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.036
ELB improved by 2.93467

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.833
ELB improved by 2.20329

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.846
ELB improved by 1.98709

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.889
ELB improved by 1.95716

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.875
ELB improved by 2.0131

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.76
ELB improved by 2.11585

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.527
ELB improved by 2.2321

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.221
ELB improved by 2.30602

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.959
ELB improved by 2.26221

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.906
ELB improved by 2.05297

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.194
ELB improved by 1.71188

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.855
ELB improved by 1.33909

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.83
ELB improved by 1.02536

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.025
ELB improved by 0.805136

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.354
ELB improved by 0.670473

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.755
ELB improved by 0.599814

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.182
ELB improved by 0.572663

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.608
ELB improved by 0.573818

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.014
ELB improved by 0.593644

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.388
ELB improved by 0.62687

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.716
ELB improved by 0.671141

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.991
ELB improved by 0.725782

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.2
ELB improved by 0.790667

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.335
ELB improved by 0.864965

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.389
ELB improved by 0.945617

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.364
ELB improved by 1.02571

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.27
ELB improved by 1.09342

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.137
ELB improved by 1.13302

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.007
ELB improved by 1.13019

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.924
ELB improved by 1.08284

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.909
ELB improved by 1.01554

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.911
ELB improved by 0.998011

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.769
ELB improved by 1.14211

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.443
ELB improved by 1.32591

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.293
ELB improved by 1.14912

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.446
ELB improved by 0.84721

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.785
ELB improved by 0.661215

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.214
ELB improved by 0.570637

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.678
ELB improved by 0.536295

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.149
ELB improved by 0.528848

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.634
ELB improved by 0.515047

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.147
ELB improved by 0.487297

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.689
ELB improved by 0.457676

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.277
ELB improved by 0.411886

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.942
ELB improved by 0.335089

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.693
ELB improved by 0.248953

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.512
ELB improved by 0.181182

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.375
ELB improved by 0.136889

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.267
ELB improved by 0.108603

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.178
ELB improved by 0.0887712

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.105
ELB improved by 0.0730358

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.045
ELB improved by 0.0597437

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.996
ELB improved by 0.0486507

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.957
ELB improved by 0.0397807

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.924
ELB improved by 0.0329371

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.896
ELB improved by 0.0277367

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.872
ELB improved by 0.0237739

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.852
ELB improved by 0.020714

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.833
ELB improved by 0.0183108

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.817
ELB improved by 0.0163917

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.802
ELB improved by 0.0148374

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.788
ELB improved by 0.013565

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.776
ELB improved by 0.0125164

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.764
ELB improved by 0.0116512

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.753
ELB improved by 0.0109412

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.743
ELB improved by 0.0103687

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.733
ELB improved by 0.00992418

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-855.914
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-568.192
ELB improved by 287.722

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-506.154
ELB improved by 62.038

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-467.53
ELB improved by 38.6238

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-452.472
ELB improved by 15.0579

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.538
ELB improved by 5.93435

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.899
ELB improved by 3.63917

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.906
ELB improved by 2.99274

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.194
ELB improved by 2.71189

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.676
ELB improved by 2.5179

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.333
ELB improved by 2.34341

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.17
ELB improved by 2.16291

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.206
ELB improved by 1.96397

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.464
ELB improved by 1.74157

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.965
ELB improved by 1.49916

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.717
ELB improved by 1.2479

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.714
ELB improved by 1.00348

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.931
ELB improved by 0.782445

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.333
ELB improved by 0.59771

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.879
ELB improved by 0.454621

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.528
ELB improved by 0.350676

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.25
ELB improved by 0.278465

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.02
ELB improved by 0.229373

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.824
ELB improved by 0.196042

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.651
ELB improved by 0.173178

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.494
ELB improved by 0.157357

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.347
ELB improved by 0.146515

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.208
ELB improved by 0.139487

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.072
ELB improved by 0.135685

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.937
ELB improved by 0.134913

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.8
ELB improved by 0.137264

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.657
ELB improved by 0.143088

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.504
ELB improved by 0.152991

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.336
ELB improved by 0.167859

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.147
ELB improved by 0.188897

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.929
ELB improved by 0.217654

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.673
ELB improved by 0.256036

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.367
ELB improved by 0.30626

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.996
ELB improved by 0.370735

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.545
ELB improved by 0.451781

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.993
ELB improved by 0.55109

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.325
ELB improved by 0.668922

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.521
ELB improved by 0.803352

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.571
ELB improved by 0.950073

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.469
ELB improved by 1.10257

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.218
ELB improved by 1.25096

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.839
ELB improved by 1.37861

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.379
ELB improved by 1.46028

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.91
ELB improved by 1.46877

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.517
ELB improved by 1.39317

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.259
ELB improved by 1.25813

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.129
ELB improved by 1.12938

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.009
ELB improved by 1.12029

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.604
ELB improved by 1.40449

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.786
ELB improved by 1.81824

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.118
ELB improved by 1.66779

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.883
ELB improved by 1.2355

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.969
ELB improved by 0.913888

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.293
ELB improved by 0.676078

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.81
ELB improved by 0.483383

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.462
ELB improved by 0.347555

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.197
ELB improved by 0.265198

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.981
ELB improved by 0.216098

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.8
ELB improved by 0.181135

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.65
ELB improved by 0.149153

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.532
ELB improved by 0.118101

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.441
ELB improved by 0.0911752

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.37
ELB improved by 0.0707834

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.314
ELB improved by 0.0564766

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.267
ELB improved by 0.0465047

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.228
ELB improved by 0.0392966

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.194
ELB improved by 0.0338343

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.165
ELB improved by 0.0295237

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.139
ELB improved by 0.0260183

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.116
ELB improved by 0.0231047

iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.095
ELB improved by 0.0206417

iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.076
ELB improved by 0.0185306

iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.06
ELB improved by 0.0166998

iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.045
ELB improved by 0.0150965

iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.031
ELB improved by 0.0136821

iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.019
ELB improved by 0.0124282

iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.007
ELB improved by 0.0113143

iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.997
ELB improved by 0.0103253

iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.987
ELB improved by 0.00944901

ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
> 
> proc.time()
   user  system elapsed 
  5.448   0.504   6.499

Example timings

graper.Rcheck/graper-Ex.timings

name	user	system	elapsed
coef.graper	0.083	0.040	0.124
getPIPs	0.076	0.038	0.120
graper	0.125	0.051	0.184
makeExampleData	0.018	0.003	0.021
makeExampleDataWithUnequalGroups	0.044	0.005	0.051
plotELBO	0.622	0.040	0.687
plotGroupPenalties	2.675	0.131	2.910
plotPosterior	1.587	0.047	1.700
predict.graper	2.969	0.190	3.287
print.graper	0.074	0.030	0.107