Multiple platform build/check report for BioC 3.22 - CHECK results for graper on nebbiolo2

Hostname	OS	Arch (*)	R version	Installed pkgs
nebbiolo2	Linux (Ubuntu 24.04.3 LTS)	x86_64	4.5.1 Patched (2025-08-23 r88802) -- "Great Square Root"	4898
lconway	macOS 12.7.6 Monterey	x86_64	4.5.1 Patched (2025-09-10 r88807) -- "Great Square Root"	4688
kjohnson3	macOS 13.7.7 Ventura	arm64	4.5.1 Patched (2025-09-10 r88807) -- "Great Square Root"	4634
taishan	Linux (openEuler 24.03 LTS)	aarch64	4.5.0 (2025-04-11) -- "How About a Twenty-Six"	4658
Click on any hostname to see more info about the system (e.g. compilers) () as reported by 'uname -p', except on Windows and Mac OS X*

CHECK results for graper on nebbiolo2

To the developers/maintainers of the graper package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results

Summary

Package: graper

Version: 1.25.2

Command: /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.22-bioc/R/site-library --timings graper_1.25.2.tar.gz

StartedAt: 2025-10-24 00:11:19 -0400 (Fri, 24 Oct 2025)

EndedAt: 2025-10-24 00:12:49 -0400 (Fri, 24 Oct 2025)

EllapsedTime: 90.1 seconds

RetCode: 0

Status: OK

CheckDir: graper.Rcheck

Warnings: 0

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.22-bioc/R/site-library --timings graper_1.25.2.tar.gz
###
##############################################################################
##############################################################################


* using log directory ‘/home/biocbuild/bbs-3.22-bioc/meat/graper.Rcheck’
* using R version 4.5.1 Patched (2025-08-23 r88802)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    gcc (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0
    GNU Fortran (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0
* running under: Ubuntu 24.04.3 LTS
* using session charset: UTF-8
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.25.2’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* used C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0’
* checking installed package size ... INFO
  installed size is  6.0Mb
  sub-directories of 1Mb or more:
    libs   5.8Mb
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... NOTE
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
  Running ‘testthat.R’
 OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... OK
* checking PDF version of manual ... OK
* DONE

Status: 2 NOTEs
See
  ‘/home/biocbuild/bbs-3.22-bioc/meat/graper.Rcheck/00check.log’
for details.

Installation output

graper.Rcheck/00install.out

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD INSTALL graper
###
##############################################################################
##############################################################################


* installing to library ‘/home/biocbuild/bbs-3.22-bioc/R/site-library’
* installing *source* package ‘graper’ ...
** this is package ‘graper’ version ‘1.25.2’
** using staged installation
** libs
using C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0’
g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.22-bioc/R/include" -DNDEBUG  -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/BH/include' -I/usr/local/include    -fpic  -g -O2  -Wall -Werror=format-security  -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.22-bioc/R/include" -DNDEBUG  -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/BH/include' -I/usr/local/include    -fpic  -g -O2  -Wall -Werror=format-security  -c fit_graper.cpp -o fit_graper.o
g++ -std=gnu++17 -shared -L/home/biocbuild/bbs-3.22-bioc/R/lib -L/usr/local/lib -o graper.so RcppExports.o fit_graper.o -llapack -L/home/biocbuild/bbs-3.22-bioc/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/biocbuild/bbs-3.22-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.22-bioc/R/site-library/00LOCK-graper/00new/graper/libs
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (graper)

Tests output

graper.Rcheck/tests/testthat.Rout


R version 4.5.1 Patched (2025-08-23 r88802) -- "Great Square Root"
Copyright (C) 2025 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> library(testthat)
> library(graper)
> 
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-831.254
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-546.118
ELB improved by 285.136

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-486.198
ELB improved by 59.9202

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-453.717
ELB improved by 32.4805

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.869
ELB improved by 11.8478

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.132
ELB improved by 4.73767

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.084
ELB improved by 3.04757

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.542
ELB improved by 2.54226

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.146
ELB improved by 2.39545

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.721
ELB improved by 2.42485

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.142
ELB improved by 2.57914

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.3
ELB improved by 2.8422

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.146
ELB improved by 3.15442

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.803
ELB improved by 3.3429

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.633
ELB improved by 3.16946

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.061
ELB improved by 2.57256

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.262
ELB improved by 1.79894

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.109
ELB improved by 1.15252

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.373
ELB improved by 0.73673

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.874
ELB improved by 0.498713

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.511
ELB improved by 0.362437

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.232
ELB improved by 0.279313

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.007
ELB improved by 0.224816

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.82
ELB improved by 0.187093

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.66
ELB improved by 0.160007

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.52
ELB improved by 0.139997

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.395
ELB improved by 0.124812

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.282
ELB improved by 0.11297

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.179
ELB improved by 0.103487

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.083
ELB improved by 0.0957054

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.994
ELB improved by 0.0891857

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.91
ELB improved by 0.0836256

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.832
ELB improved by 0.0788125

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.757
ELB improved by 0.0745928

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.686
ELB improved by 0.0708524

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.619
ELB improved by 0.0675043

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.554
ELB improved by 0.0644818

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.492
ELB improved by 0.0617326

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.433
ELB improved by 0.0592162

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.376
ELB improved by 0.056901

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.322
ELB improved by 0.0547627

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.269
ELB improved by 0.0527833

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.218
ELB improved by 0.0509494

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.169
ELB improved by 0.0492517

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.121
ELB improved by 0.0476843

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.075
ELB improved by 0.0462438

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.03
ELB improved by 0.0449287

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.986
ELB improved by 0.0437394

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.943
ELB improved by 0.0426768

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.902
ELB improved by 0.0417424

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.861
ELB improved by 0.0409371

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.82
ELB improved by 0.0402602

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.781
ELB improved by 0.0397081

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.741
ELB improved by 0.0392727

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.702
ELB improved by 0.0389397

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.664
ELB improved by 0.038687

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.625
ELB improved by 0.0384846

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.587
ELB improved by 0.0382954

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.549
ELB improved by 0.0380794

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.511
ELB improved by 0.0377987

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.474
ELB improved by 0.0374245

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.437
ELB improved by 0.0369419

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.4
ELB improved by 0.0363515

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.365
ELB improved by 0.0356677

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.33
ELB improved by 0.0349137

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.296
ELB improved by 0.0341156

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.262
ELB improved by 0.0332976

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.23
ELB improved by 0.0324793

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.198
ELB improved by 0.0316747

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.167
ELB improved by 0.0308924

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.137
ELB improved by 0.0301366

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.108
ELB improved by 0.0294083

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.079
ELB improved by 0.0287062

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.051
ELB improved by 0.0280277

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.024
ELB improved by 0.0273694

iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.997
ELB improved by 0.0267278

iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.971
ELB improved by 0.0260993

iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.945
ELB improved by 0.0254806

iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.921
ELB improved by 0.0248689

iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.896
ELB improved by 0.024262

iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.873
ELB improved by 0.023658

iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.85
ELB improved by 0.0230558

iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.827
ELB improved by 0.0224549

iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.805
ELB improved by 0.0218551

iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.784
ELB improved by 0.0212572

iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.763
ELB improved by 0.0206622

iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.743
ELB improved by 0.0200718

iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.724
ELB improved by 0.0194883

iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.705
ELB improved by 0.0189143

iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.687
ELB improved by 0.0183532

iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.669
ELB improved by 0.0178088

iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.651
ELB improved by 0.0172856

iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.635
ELB improved by 0.016789

iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.618
ELB improved by 0.0163254

iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.602
ELB improved by 0.0159023

iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.587
ELB improved by 0.0155294

iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.572
ELB improved by 0.0152187

iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.557
ELB improved by 0.0149865

iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.542
ELB improved by 0.0148546

iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.527
ELB improved by 0.0148539

iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.512
ELB improved by 0.0150292

iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.496
ELB improved by 0.0154481

iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.48
ELB improved by 0.0162152

iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.463
ELB improved by 0.0174982

iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.443
ELB improved by 0.0195727

iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.42
ELB improved by 0.0229029

iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.392
ELB improved by 0.028277

iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.355
ELB improved by 0.0370073

iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.304
ELB improved by 0.0511002

iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.231
ELB improved by 0.0729283

iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.128
ELB improved by 0.10328

iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.99
ELB improved by 0.137476

iteration 113
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.826
ELB improved by 0.164451

iteration 114
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.652
ELB improved by 0.174174

iteration 115
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.487
ELB improved by 0.164651

iteration 116
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.345
ELB improved by 0.141635

iteration 117
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.231
ELB improved by 0.114737

iteration 118
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.139
ELB improved by 0.0914217

iteration 119
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.065
ELB improved by 0.0743763

iteration 120
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.002
ELB improved by 0.0632724

iteration 121
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.945
ELB improved by 0.0568779

iteration 122
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.891
ELB improved by 0.0539172

iteration 123
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.838
ELB improved by 0.0531236

iteration 124
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.785
ELB improved by 0.0530648

iteration 125
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.732
ELB improved by 0.0521616

iteration 126
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.683
ELB improved by 0.0491812

iteration 127
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.639
ELB improved by 0.0439781

iteration 128
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.602
ELB improved by 0.0376405

iteration 129
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.57
ELB improved by 0.0316623

iteration 130
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.543
ELB improved by 0.026998

iteration 131
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.519
ELB improved by 0.0238405

iteration 132
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.497
ELB improved by 0.0219223

iteration 133
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.476
ELB improved by 0.0208268

iteration 134
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.456
ELB improved by 0.0201465

iteration 135
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.437
ELB improved by 0.0195555

iteration 136
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.418
ELB improved by 0.0188532

iteration 137
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.4
ELB improved by 0.0179767

iteration 138
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.383
ELB improved by 0.0169668

iteration 139
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.367
ELB improved by 0.0159047

iteration 140
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.352
ELB improved by 0.014858

iteration 141
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.338
ELB improved by 0.0138578

iteration 142
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.325
ELB improved by 0.0129037

iteration 143
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.313
ELB improved by 0.0119799

iteration 144
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.302
ELB improved by 0.0110699

iteration 145
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.292
ELB improved by 0.010166

iteration 146
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.283
ELB improved by 0.00927235

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-860.418
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-585.3
ELB improved by 275.119

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-526.514
ELB improved by 58.7858

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-482.731
ELB improved by 43.7828

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-460.95
ELB improved by 21.7811

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-451.82
ELB improved by 9.13012

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.252
ELB improved by 5.56737

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.273
ELB improved by 4.97976

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.083
ELB improved by 5.18942

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.406
ELB improved by 5.67725

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.358
ELB improved by 6.04842

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.549
ELB improved by 5.80825

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.775
ELB improved by 4.77447

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.366
ELB improved by 3.40873

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.06
ELB improved by 2.30637

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.447
ELB improved by 1.61308

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.296
ELB improved by 1.15063

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.473
ELB improved by 0.822742

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.85
ELB improved by 0.623175

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.337
ELB improved by 0.513488

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.883
ELB improved by 0.453858

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.462
ELB improved by 0.421035

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.058
ELB improved by 0.403207

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.664
ELB improved by 0.394571

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.272
ELB improved by 0.392416

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.876
ELB improved by 0.395701

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.471
ELB improved by 0.404347

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.053
ELB improved by 0.41884

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.613
ELB improved by 0.439961

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.144
ELB improved by 0.468554

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.639
ELB improved by 0.505295

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.088
ELB improved by 0.550453

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.485
ELB improved by 0.60369

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.821
ELB improved by 0.66404

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.09
ELB improved by 0.730268

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.288
ELB improved by 0.801879

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.407
ELB improved by 0.881182

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.431
ELB improved by 0.976533

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.336
ELB improved by 1.09523

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.162
ELB improved by 1.17315

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.104
ELB improved by 1.05812

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.293
ELB improved by 0.811111

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.702
ELB improved by 0.591563

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.268
ELB improved by 0.433833

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.942
ELB improved by 0.326024

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.689
ELB improved by 0.253138

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.485
ELB improved by 0.203105

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.318
ELB improved by 0.167272

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.178
ELB improved by 0.139782

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.061
ELB improved by 0.117178

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.963
ELB improved by 0.0981772

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.88
ELB improved by 0.0827929

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.809
ELB improved by 0.0711119

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.746
ELB improved by 0.0627067

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.69
ELB improved by 0.0567925

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.637
ELB improved by 0.0525719

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.588
ELB improved by 0.0494209

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.541
ELB improved by 0.0469143

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.496
ELB improved by 0.0447825

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.453
ELB improved by 0.042861

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.412
ELB improved by 0.0410517

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.373
ELB improved by 0.0392995

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.335
ELB improved by 0.0375769

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.299
ELB improved by 0.0358749

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.265
ELB improved by 0.0341974

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.233
ELB improved by 0.0325562

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.202
ELB improved by 0.030968

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.172
ELB improved by 0.0294513

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.144
ELB improved by 0.0280239

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.117
ELB improved by 0.026702

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.092
ELB improved by 0.0254979

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.068
ELB improved by 0.0244206

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.044
ELB improved by 0.0234745

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.021
ELB improved by 0.0226604

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.999
ELB improved by 0.0219756

iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.978
ELB improved by 0.0214148

iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.957
ELB improved by 0.0209705

iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.936
ELB improved by 0.0206335

iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.916
ELB improved by 0.0203943

iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.896
ELB improved by 0.0202427

iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.876
ELB improved by 0.0201686

iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.855
ELB improved by 0.0201625

iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.835
ELB improved by 0.0202153

iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.815
ELB improved by 0.0203185

iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.794
ELB improved by 0.0204644

iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.774
ELB improved by 0.020646

iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.753
ELB improved by 0.0208569

iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.732
ELB improved by 0.0210915

iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.71
ELB improved by 0.0213444

iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.689
ELB improved by 0.0216111

iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.667
ELB improved by 0.0218871

iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.645
ELB improved by 0.0221686

iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.622
ELB improved by 0.0224519

iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.6
ELB improved by 0.0227335

iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.577
ELB improved by 0.0230104

iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.553
ELB improved by 0.0232794

iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.53
ELB improved by 0.0235379

iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.506
ELB improved by 0.0237831

iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.482
ELB improved by 0.0240124

iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.458
ELB improved by 0.0242237

iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.433
ELB improved by 0.0244145

iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.409
ELB improved by 0.0245828

iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.384
ELB improved by 0.0247267

iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.359
ELB improved by 0.0248442

iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.334
ELB improved by 0.0249338

iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.309
ELB improved by 0.0249938

iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.284
ELB improved by 0.0250228

iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.259
ELB improved by 0.0250195

iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.234
ELB improved by 0.0249827

iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.209
ELB improved by 0.0249114

iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.185
ELB improved by 0.0248048

iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.16
ELB improved by 0.0246622

iteration 113
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.135
ELB improved by 0.0244831

iteration 114
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.111
ELB improved by 0.0242673

iteration 115
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.087
ELB improved by 0.0240147

iteration 116
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.063
ELB improved by 0.0237257

iteration 117
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.04
ELB improved by 0.023401

iteration 118
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.017
ELB improved by 0.0230414

iteration 119
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.994
ELB improved by 0.0226485

iteration 120
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.972
ELB improved by 0.0222242

iteration 121
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.95
ELB improved by 0.0217707

iteration 122
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.929
ELB improved by 0.0212909

iteration 123
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.908
ELB improved by 0.0207882

iteration 124
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.888
ELB improved by 0.0202663

iteration 125
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.868
ELB improved by 0.0197297

iteration 126
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.849
ELB improved by 0.0191831

iteration 127
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.83
ELB improved by 0.018632

iteration 128
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.812
ELB improved by 0.0180823

iteration 129
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.795
ELB improved by 0.0175406

iteration 130
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.778
ELB improved by 0.0170141

iteration 131
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.761
ELB improved by 0.0165112

iteration 132
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.745
ELB improved by 0.0160413

iteration 133
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.73
ELB improved by 0.0156161

iteration 134
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.714
ELB improved by 0.0152496

iteration 135
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.699
ELB improved by 0.0149599

iteration 136
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.685
ELB improved by 0.0147712

iteration 137
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.67
ELB improved by 0.0147166

iteration 138
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.655
ELB improved by 0.0148434

iteration 139
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.64
ELB improved by 0.0152205

iteration 140
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.624
ELB improved by 0.0159504

iteration 141
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.607
ELB improved by 0.0171872

iteration 142
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.588
ELB improved by 0.0191608

iteration 143
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.565
ELB improved by 0.0222022

iteration 144
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.539
ELB improved by 0.0267446

iteration 145
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.505
ELB improved by 0.0332241

iteration 146
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.464
ELB improved by 0.0417343

iteration 147
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.412
ELB improved by 0.0513339

iteration 148
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.353
ELB improved by 0.0594561

iteration 149
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.29
ELB improved by 0.0627671

iteration 150
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.23
ELB improved by 0.0598499

iteration 151
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.178
ELB improved by 0.0527011

iteration 152
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.133
ELB improved by 0.0447362

iteration 153
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.095
ELB improved by 0.0381849

iteration 154
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.061
ELB improved by 0.0336618

iteration 155
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.03
ELB improved by 0.0310178

iteration 156
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384
ELB improved by 0.0300293

iteration 157
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.969
ELB improved by 0.0306346

iteration 158
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.936
ELB improved by 0.0328944

iteration 159
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.9
ELB improved by 0.0367528

iteration 160
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.858
ELB improved by 0.041563

iteration 161
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.812
ELB improved by 0.0455696

iteration 162
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.766
ELB improved by 0.0462156

iteration 163
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.724
ELB improved by 0.0420004

iteration 164
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.69
ELB improved by 0.0341693

iteration 165
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.664
ELB improved by 0.0256254

iteration 166
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.646
ELB improved by 0.0185013

iteration 167
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.633
ELB improved by 0.0133687

iteration 168
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.623
ELB improved by 0.00990911

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-821.671
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-560.839
ELB improved by 260.832

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-498.849
ELB improved by 61.9909

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-457.732
ELB improved by 41.1166

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.113
ELB improved by 18.6187

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.184
ELB improved by 7.92892

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.166
ELB improved by 4.01789

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.478
ELB improved by 2.68883

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.256
ELB improved by 2.22182

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.227
ELB improved by 2.02915

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.293
ELB improved by 1.93389

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.429
ELB improved by 1.8641

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.64
ELB improved by 1.78815

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.948
ELB improved by 1.69295

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.372
ELB improved by 1.57554

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.933
ELB improved by 1.43852

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.649
ELB improved by 1.28431

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.537
ELB improved by 1.11181

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.615
ELB improved by 0.922562

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.884
ELB improved by 0.730804

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.324
ELB improved by 0.56013

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.896
ELB improved by 0.427826

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.56
ELB improved by 0.336316

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.282
ELB improved by 0.277785

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.04
ELB improved by 0.242083

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.819
ELB improved by 0.220918

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.61
ELB improved by 0.208618

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.409
ELB improved by 0.201552

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.211
ELB improved by 0.197421

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.017
ELB improved by 0.194739

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.824
ELB improved by 0.192521

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.634
ELB improved by 0.190112

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.447
ELB improved by 0.187102

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.264
ELB improved by 0.183287

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.085
ELB improved by 0.178643

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.912
ELB improved by 0.173296

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.744
ELB improved by 0.167477

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.583
ELB improved by 0.161463

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.427
ELB improved by 0.155505

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.277
ELB improved by 0.149752

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.133
ELB improved by 0.144187

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.995
ELB improved by 0.138611

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.862
ELB improved by 0.132709

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.736
ELB improved by 0.126203

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.617
ELB improved by 0.11901

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.505
ELB improved by 0.111314

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.402
ELB improved by 0.103477

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.306
ELB improved by 0.0958949

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.217
ELB improved by 0.0888668

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.135
ELB improved by 0.0825638

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.058
ELB improved by 0.0770469

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.985
ELB improved by 0.072308

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.917
ELB improved by 0.0683058

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.852
ELB improved by 0.0649904

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.79
ELB improved by 0.0623177

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.729
ELB improved by 0.0602582

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.671
ELB improved by 0.058804

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.613
ELB improved by 0.0579763

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.555
ELB improved by 0.0578362

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.496
ELB improved by 0.0585025

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.436
ELB improved by 0.0601779

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.373
ELB improved by 0.0631865

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.305
ELB improved by 0.068016

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.23
ELB improved by 0.0753412

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.144
ELB improved by 0.0859733

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.043
ELB improved by 0.100682

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.923
ELB improved by 0.120048

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.778
ELB improved by 0.144988

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.6
ELB improved by 0.178294

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.375
ELB improved by 0.22461

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.09
ELB improved by 0.284721

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.736
ELB improved by 0.353864

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.292
ELB improved by 0.444278

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.699
ELB improved by 0.593039

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.924
ELB improved by 0.775205

iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.083
ELB improved by 0.840566

iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.332
ELB improved by 0.751676

iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.717
ELB improved by 0.614826

iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.228
ELB improved by 0.488824

iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.843
ELB improved by 0.38526

iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.54
ELB improved by 0.30318

iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.3
ELB improved by 0.239657

iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.108
ELB improved by 0.191689

iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.952
ELB improved by 0.156444

iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.82
ELB improved by 0.13173

iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.704
ELB improved by 0.116294

iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.594
ELB improved by 0.109786

iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.481
ELB improved by 0.112688

iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.355
ELB improved by 0.126663

iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.199
ELB improved by 0.155314

iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.996
ELB improved by 0.202961

iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.732
ELB improved by 0.264623

iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.417
ELB improved by 0.315101

iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.088
ELB improved by 0.328546

iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.794
ELB improved by 0.29394

iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.575
ELB improved by 0.21866

iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.436
ELB improved by 0.139246

iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.353
ELB improved by 0.0829538

iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.303
ELB improved by 0.0502401

iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.27
ELB improved by 0.0325605

iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.247
ELB improved by 0.0230019

iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.23
ELB improved by 0.0175801

iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.216
ELB improved by 0.0142559

iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.204
ELB improved by 0.0120305

iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.193
ELB improved by 0.0104165

iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.184
ELB improved by 0.00917079

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-876.017
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-599.441
ELB improved by 276.576

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-540.251
ELB improved by 59.1901

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-494.707
ELB improved by 45.5438

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-471.223
ELB improved by 23.4833

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-461.758
ELB improved by 9.46574

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-456.698
ELB improved by 5.06013

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-452.991
ELB improved by 3.70673

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.703
ELB improved by 3.2881

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.48
ELB improved by 3.22254

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.28
ELB improved by 3.20037

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.222
ELB improved by 3.05826

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.498
ELB improved by 2.72308

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.258
ELB improved by 2.24045

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.52
ELB improved by 1.73782

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.211
ELB improved by 1.30949

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.235
ELB improved by 0.975637

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.513
ELB improved by 0.722387

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.984
ELB improved by 0.528275

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.601
ELB improved by 0.383043

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.319
ELB improved by 0.282595

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.101
ELB improved by 0.217373

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.926
ELB improved by 0.175377

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.779
ELB improved by 0.14731

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.651
ELB improved by 0.127471

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.539
ELB improved by 0.11269

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.437
ELB improved by 0.101244

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.345
ELB improved by 0.092168

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.26
ELB improved by 0.0848878

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.181
ELB improved by 0.0790412

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.107
ELB improved by 0.0743854

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.036
ELB improved by 0.0707516

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.968
ELB improved by 0.0680205

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.902
ELB improved by 0.0661089

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.837
ELB improved by 0.0649611

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.772
ELB improved by 0.0645444

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.708
ELB improved by 0.0648445

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.642
ELB improved by 0.0658641

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.574
ELB improved by 0.0676193

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.504
ELB improved by 0.070138

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.431
ELB improved by 0.0734565

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.353
ELB improved by 0.0776161

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.27
ELB improved by 0.0826592

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.182
ELB improved by 0.088624

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.086
ELB improved by 0.0955408

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.983
ELB improved by 0.103428

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.87
ELB improved by 0.112292

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.748
ELB improved by 0.122128

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.615
ELB improved by 0.132931

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.471
ELB improved by 0.144701

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.313
ELB improved by 0.157469

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.142
ELB improved by 0.171309

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.955
ELB improved by 0.186368

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.753
ELB improved by 0.202893

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.531
ELB improved by 0.221279

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.289
ELB improved by 0.242138

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.023
ELB improved by 0.266435

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.727
ELB improved by 0.295727

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.394
ELB improved by 0.332622

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.013
ELB improved by 0.381683

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.561
ELB improved by 0.451489

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.001
ELB improved by 0.559768

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.259
ELB improved by 0.742642

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.231
ELB improved by 1.02791

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.973
ELB improved by 1.25803

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.757
ELB improved by 1.21628

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.719
ELB improved by 1.03783

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.861
ELB improved by 0.857314

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.159
ELB improved by 0.702588

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.581
ELB improved by 0.57744

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.093
ELB improved by 0.488483

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.646
ELB improved by 0.447098

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.189
ELB improved by 0.45646

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.681
ELB improved by 0.508369

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.121
ELB improved by 0.560379

iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.632
ELB improved by 0.4885

iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.329
ELB improved by 0.303392

iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.169
ELB improved by 0.15924

iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.083
ELB improved by 0.0869293

iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.029
ELB improved by 0.0532757

iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.993
ELB improved by 0.0365616

iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.965
ELB improved by 0.0274358

iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.943
ELB improved by 0.0219653

iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.925
ELB improved by 0.0184002

iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.909
ELB improved by 0.0159011

iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.895
ELB improved by 0.0140368

iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.882
ELB improved by 0.0125737

iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.871
ELB improved by 0.0113794

iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.861
ELB improved by 0.010376

iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.851
ELB improved by 0.00951565

ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
> 
> proc.time()
   user  system elapsed 
  2.172   0.170   2.331

Example timings

graper.Rcheck/graper-Ex.timings

name	user	system	elapsed
coef.graper	0.054	0.001	0.054
getPIPs	0.048	0.004	0.053
graper	0.082	0.005	0.087
makeExampleData	0.008	0.002	0.011
makeExampleDataWithUnequalGroups	0.010	0.003	0.013
plotELBO	0.331	0.026	0.357
plotGroupPenalties	1.108	0.046	1.153
plotPosterior	0.634	0.012	0.646
predict.graper	2.072	0.015	2.087
print.graper	0.048	0.002	0.052