Britta Velten
| Snapshot Date: 2026-02-12 13:45 -0500 (Thu, 12 Feb 2026) |
| git_url: https://git.bioconductor.org/packages/graper |
| git_branch: RELEASE_3_22 |
| git_last_commit: 76fc31b |
| git_last_commit_date: 2025-10-29 10:49:21 -0500 (Wed, 29 Oct 2025) |
| Back to Build/check report for BioC 3.22: simplified long |
|
This page was generated on 2026-02-16 11:57 -0500 (Mon, 16 Feb 2026).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 24.04.3 LTS) | x86_64 | 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" | 4889 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 922/2361 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| graper 1.26.0 (landing page) Britta Velten
| nebbiolo2 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | | ||||||||
| See other builds for graper in R Universe. | ||||||||||||||
|
To the developers/maintainers of the graper package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: graper |
| Version: 1.26.0 |
| Command: /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.22-bioc/R/site-library --timings graper_1.26.0.tar.gz |
| StartedAt: 2026-02-13 00:40:03 -0500 (Fri, 13 Feb 2026) |
| EndedAt: 2026-02-13 00:41:34 -0500 (Fri, 13 Feb 2026) |
| EllapsedTime: 91.1 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: graper.Rcheck |
| Warnings: 0 |
##############################################################################
##############################################################################
###
### Running command:
###
### /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.22-bioc/R/site-library --timings graper_1.26.0.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/home/biocbuild/bbs-3.22-bioc/meat/graper.Rcheck’
* using R version 4.5.2 (2025-10-31)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
gcc (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0
GNU Fortran (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0
* running under: Ubuntu 24.04.3 LTS
* using session charset: UTF-8
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.26.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* used C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0’
* checking installed package size ... INFO
installed size is 6.1Mb
sub-directories of 1Mb or more:
libs 6.0Mb
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... NOTE
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘testthat.R’
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... OK
* checking PDF version of manual ... OK
* DONE
Status: 2 NOTEs
See
‘/home/biocbuild/bbs-3.22-bioc/meat/graper.Rcheck/00check.log’
for details.
graper.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD INSTALL graper ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.22-bioc/R/site-library’ * installing *source* package ‘graper’ ... ** this is package ‘graper’ version ‘1.26.0’ ** using staged installation ** libs using C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0’ g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.22-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/BH/include' -I/usr/local/include -fpic -g -O2 -Wall -Werror=format-security -c RcppExports.cpp -o RcppExports.o g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.22-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/BH/include' -I/usr/local/include -fpic -g -O2 -Wall -Werror=format-security -c fit_graper.cpp -o fit_graper.o g++ -std=gnu++17 -shared -L/home/biocbuild/bbs-3.22-bioc/R/lib -L/usr/local/lib -o graper.so RcppExports.o fit_graper.o -llapack -L/home/biocbuild/bbs-3.22-bioc/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/biocbuild/bbs-3.22-bioc/R/lib -lR installing to /home/biocbuild/bbs-3.22-bioc/R/site-library/00LOCK-graper/00new/graper/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (graper)
graper.Rcheck/tests/testthat.Rout
R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble"
Copyright (C) 2025 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(testthat)
> library(graper)
>
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-849.269
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-543.324
ELB improved by 305.945
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-486.323
ELB improved by 57.0015
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-457.291
ELB improved by 29.032
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.187
ELB improved by 11.1035
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.822
ELB improved by 5.36554
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.894
ELB improved by 3.9275
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.436
ELB improved by 3.45816
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.154
ELB improved by 3.28175
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.966
ELB improved by 3.18805
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.899
ELB improved by 3.06694
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.075
ELB improved by 2.82452
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.657
ELB improved by 2.41806
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.751
ELB improved by 1.90609
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.353
ELB improved by 1.39764
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.375
ELB improved by 0.977561
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.696
ELB improved by 0.679869
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.204
ELB improved by 0.491804
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.824
ELB improved by 0.379777
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.51
ELB improved by 0.314078
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.235
ELB improved by 0.275278
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.983
ELB improved by 0.251787
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.746
ELB improved by 0.236853
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.519
ELB improved by 0.226429
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.301
ELB improved by 0.218082
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.091
ELB improved by 0.210687
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.887
ELB improved by 0.203993
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.689
ELB improved by 0.197899
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.497
ELB improved by 0.192101
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.311
ELB improved by 0.186231
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.13
ELB improved by 0.180082
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.957
ELB improved by 0.17368
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.79
ELB improved by 0.167229
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.628
ELB improved by 0.16103
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.473
ELB improved by 0.155412
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.322
ELB improved by 0.15068
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.175
ELB improved by 0.147082
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.031
ELB improved by 0.144783
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.887
ELB improved by 0.14381
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.743
ELB improved by 0.14397
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.598
ELB improved by 0.144751
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.453
ELB improved by 0.145299
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.308
ELB improved by 0.144653
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.166
ELB improved by 0.142214
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.028
ELB improved by 0.138102
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.895
ELB improved by 0.133001
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.767
ELB improved by 0.12767
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.644
ELB improved by 0.122592
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.527
ELB improved by 0.117951
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.413
ELB improved by 0.113757
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.303
ELB improved by 0.109953
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.196
ELB improved by 0.106472
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.093
ELB improved by 0.103256
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.993
ELB improved by 0.10027
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.895
ELB improved by 0.0974933
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.8
ELB improved by 0.0949277
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.708
ELB improved by 0.0925929
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.617
ELB improved by 0.0905273
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.528
ELB improved by 0.0887876
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.441
ELB improved by 0.0874478
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.354
ELB improved by 0.0865998
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.268
ELB improved by 0.0863538
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.181
ELB improved by 0.0868381
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.093
ELB improved by 0.0881963
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.002
ELB improved by 0.0905741
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.908
ELB improved by 0.0940882
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.81
ELB improved by 0.0987651
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.705
ELB improved by 0.104452
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.594
ELB improved by 0.110723
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.478
ELB improved by 0.116855
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.356
ELB improved by 0.121936
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.231
ELB improved by 0.125135
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.105
ELB improved by 0.125957
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.98
ELB improved by 0.124341
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.86
ELB improved by 0.12056
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.745
ELB improved by 0.115049
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.636
ELB improved by 0.10827
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.536
ELB improved by 0.100659
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.443
ELB improved by 0.0925985
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.359
ELB improved by 0.0844152
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.282
ELB improved by 0.0763743
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.214
ELB improved by 0.0686755
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.152
ELB improved by 0.0614551
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.097
ELB improved by 0.0547932
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.049
ELB improved by 0.0487246
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.005
ELB improved by 0.043251
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.967
ELB improved by 0.0383511
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.933
ELB improved by 0.0339899
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.903
ELB improved by 0.0301244
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.876
ELB improved by 0.0267088
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.853
ELB improved by 0.0236973
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.831
ELB improved by 0.0210459
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.813
ELB improved by 0.0187135
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.796
ELB improved by 0.0166625
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.781
ELB improved by 0.0148592
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.768
ELB improved by 0.0132731
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.756
ELB improved by 0.0118776
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.745
ELB improved by 0.0106489
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.736
ELB improved by 0.00956616
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-866.275
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-564.437
ELB improved by 301.838
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-511.585
ELB improved by 52.852
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-480.321
ELB improved by 31.264
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-467.095
ELB improved by 13.2258
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-461.659
ELB improved by 5.43592
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-458.39
ELB improved by 3.26964
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-455.779
ELB improved by 2.6107
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-453.417
ELB improved by 2.36173
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-451.141
ELB improved by 2.27657
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.871
ELB improved by 2.27001
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.571
ELB improved by 2.29989
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.248
ELB improved by 2.32267
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.983
ELB improved by 2.26485
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.944
ELB improved by 2.03908
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.298
ELB improved by 1.64614
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.093
ELB improved by 1.20505
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.26
ELB improved by 0.832562
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.691
ELB improved by 0.569408
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.29
ELB improved by 0.401091
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.992
ELB improved by 0.297488
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.759
ELB improved by 0.233198
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.568
ELB improved by 0.191665
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.404
ELB improved by 0.16327
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.262
ELB improved by 0.142691
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.135
ELB improved by 0.127008
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.02
ELB improved by 0.114589
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.916
ELB improved by 0.104486
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.819
ELB improved by 0.0961167
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.73
ELB improved by 0.0891057
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.647
ELB improved by 0.0831947
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.569
ELB improved by 0.0781973
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.495
ELB improved by 0.0739742
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.425
ELB improved by 0.0704174
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.357
ELB improved by 0.0674419
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.292
ELB improved by 0.0649795
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.229
ELB improved by 0.0629754
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.168
ELB improved by 0.0613849
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.108
ELB improved by 0.0601722
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.048
ELB improved by 0.0593079
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.99
ELB improved by 0.058769
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.931
ELB improved by 0.0585369
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.872
ELB improved by 0.0585976
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.813
ELB improved by 0.0589403
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.754
ELB improved by 0.0595575
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.693
ELB improved by 0.0604444
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.632
ELB improved by 0.0615984
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.569
ELB improved by 0.0630194
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.504
ELB improved by 0.064709
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.437
ELB improved by 0.0666713
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.369
ELB improved by 0.0689127
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.297
ELB improved by 0.0714434
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.223
ELB improved by 0.0742784
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.145
ELB improved by 0.0774407
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.064
ELB improved by 0.080966
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.98
ELB improved by 0.0849099
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.89
ELB improved by 0.089361
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.796
ELB improved by 0.0944614
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.695
ELB improved by 0.100442
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.588
ELB improved by 0.107683
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.471
ELB improved by 0.116821
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.342
ELB improved by 0.128925
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.196
ELB improved by 0.145759
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.026
ELB improved by 0.170003
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.821
ELB improved by 0.204761
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.571
ELB improved by 0.2508
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.269
ELB improved by 0.301701
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.923
ELB improved by 0.345489
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.546
ELB improved by 0.376883
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.147
ELB improved by 0.399498
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.731
ELB improved by 0.415789
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.307
ELB improved by 0.424411
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.883
ELB improved by 0.423827
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.468
ELB improved by 0.414831
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.068
ELB improved by 0.399997
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.687
ELB improved by 0.381419
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.327
ELB improved by 0.359523
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.993
ELB improved by 0.333825
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.689
ELB improved by 0.304381
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.416
ELB improved by 0.272475
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.176
ELB improved by 0.240092
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.968
ELB improved by 0.208851
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.788
ELB improved by 0.179426
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.636
ELB improved by 0.151934
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.509
ELB improved by 0.12682
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.404
ELB improved by 0.105128
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.316
ELB improved by 0.0878751
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.241
ELB improved by 0.075464
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.173
ELB improved by 0.0678101
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.108
ELB improved by 0.0649334
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.04
ELB improved by 0.0676576
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.962
ELB improved by 0.0784224
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.86
ELB improved by 0.101784
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.719
ELB improved by 0.140895
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.537
ELB improved by 0.182785
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.342
ELB improved by 0.194572
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.169
ELB improved by 0.172524
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.02
ELB improved by 0.149422
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.878
ELB improved by 0.141675
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.733
ELB improved by 0.145458
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.579
ELB improved by 0.154201
iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.414
ELB improved by 0.164406
iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.242
ELB improved by 0.172324
iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.072
ELB improved by 0.170108
iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.92
ELB improved by 0.151853
iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.796
ELB improved by 0.123573
iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.701
ELB improved by 0.0952482
iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.631
ELB improved by 0.0703614
iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.581
ELB improved by 0.0496573
iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.547
ELB improved by 0.0340675
iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.524
ELB improved by 0.0234772
iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.507
ELB improved by 0.0166558
iteration 113
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.495
ELB improved by 0.0122617
iteration 114
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.485
ELB improved by 0.00935218
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-852.761
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-559.539
ELB improved by 293.222
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-502.564
ELB improved by 56.9748
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-466.08
ELB improved by 36.4845
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.919
ELB improved by 15.1607
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.496
ELB improved by 5.4227
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.709
ELB improved by 2.78701
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.798
ELB improved by 1.9107
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.242
ELB improved by 1.5567
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.841
ELB improved by 1.40031
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.518
ELB improved by 1.32353
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.235
ELB improved by 1.28313
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.975
ELB improved by 1.26017
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.732
ELB improved by 1.24234
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.515
ELB improved by 1.21753
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.342
ELB improved by 1.17322
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.242
ELB improved by 1.09985
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.246
ELB improved by 0.995974
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.374
ELB improved by 0.871344
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.629
ELB improved by 0.745051
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.992
ELB improved by 0.637695
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.429
ELB improved by 0.562288
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.908
ELB improved by 0.521135
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.399
ELB improved by 0.509069
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.881
ELB improved by 0.517945
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.342
ELB improved by 0.539294
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.777
ELB improved by 0.56541
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.186
ELB improved by 0.590037
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.577
ELB improved by 0.609209
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.955
ELB improved by 0.62185
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.326
ELB improved by 0.629531
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.691
ELB improved by 0.634942
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.052
ELB improved by 0.639336
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.41
ELB improved by 0.641866
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.765
ELB improved by 0.644503
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.107
ELB improved by 0.657851
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.41
ELB improved by 0.697373
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.65
ELB improved by 0.759733
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.861
ELB improved by 0.789145
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.126
ELB improved by 0.734799
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.497
ELB improved by 0.629157
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.981
ELB improved by 0.516604
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.565
ELB improved by 0.415361
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.234
ELB improved by 0.331608
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.967
ELB improved by 0.26619
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.75
ELB improved by 0.216954
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.57
ELB improved by 0.180563
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.416
ELB improved by 0.153761
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.282
ELB improved by 0.134021
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.162
ELB improved by 0.119743
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.052
ELB improved by 0.110177
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.947
ELB improved by 0.105066
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.843
ELB improved by 0.1037
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.74
ELB improved by 0.103348
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.641
ELB improved by 0.0990385
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.554
ELB improved by 0.0875261
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.482
ELB improved by 0.0713508
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.426
ELB improved by 0.0558211
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.382
ELB improved by 0.0439001
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.347
ELB improved by 0.0357041
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.316
ELB improved by 0.0302888
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.29
ELB improved by 0.0267478
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.265
ELB improved by 0.0244752
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.242
ELB improved by 0.0231249
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.22
ELB improved by 0.0225265
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.197
ELB improved by 0.0226192
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.174
ELB improved by 0.0233987
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.149
ELB improved by 0.0248501
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.122
ELB improved by 0.026833
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.093
ELB improved by 0.0289098
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.063
ELB improved by 0.0302139
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.033
ELB improved by 0.0296489
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.006
ELB improved by 0.0266358
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.985
ELB improved by 0.0218477
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.968
ELB improved by 0.0168594
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.955
ELB improved by 0.0129419
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.944
ELB improved by 0.0104425
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.935
ELB improved by 0.00910676
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-872.809
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-561.04
ELB improved by 311.77
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-502.221
ELB improved by 58.8185
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-472.241
ELB improved by 29.9796
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-460.47
ELB improved by 11.7712
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-455.053
ELB improved by 5.4171
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-451.409
ELB improved by 3.64368
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.247
ELB improved by 3.16236
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.255
ELB improved by 2.99216
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.375
ELB improved by 2.87977
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.666
ELB improved by 2.70946
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.25
ELB improved by 2.41542
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.251
ELB improved by 1.99978
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.71
ELB improved by 1.54074
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.572
ELB improved by 1.13786
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.728
ELB improved by 0.844199
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.072
ELB improved by 0.65546
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.53
ELB improved by 0.541792
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.055
ELB improved by 0.475035
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.618
ELB improved by 0.437139
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.2
ELB improved by 0.418445
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.786
ELB improved by 0.414083
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.364
ELB improved by 0.421438
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.925
ELB improved by 0.438863
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.46
ELB improved by 0.465106
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.961
ELB improved by 0.49902
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.422
ELB improved by 0.539385
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.837
ELB improved by 0.584802
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.204
ELB improved by 0.633634
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.52
ELB improved by 0.683988
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.786
ELB improved by 0.733797
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.005
ELB improved by 0.78119
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.179
ELB improved by 0.825524
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.309
ELB improved by 0.869998
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.382
ELB improved by 0.927312
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.356
ELB improved by 1.02524
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.182
ELB improved by 1.17457
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.93
ELB improved by 1.25208
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.826
ELB improved by 1.10351
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.984
ELB improved by 0.842472
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.368
ELB improved by 0.615914
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.914
ELB improved by 0.453597
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.57
ELB improved by 0.344645
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.296
ELB improved by 0.274152
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.065
ELB improved by 0.230384
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.859
ELB improved by 0.205725
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.663
ELB improved by 0.19609
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.463
ELB improved by 0.199884
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.247
ELB improved by 0.216172
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.006
ELB improved by 0.240808
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.745
ELB improved by 0.261626
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.483
ELB improved by 0.262127
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.244
ELB improved by 0.23829
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.041
ELB improved by 0.203774
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.867
ELB improved by 0.173201
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.715
ELB improved by 0.151972
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.577
ELB improved by 0.138733
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.447
ELB improved by 0.129361
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.326
ELB improved by 0.121172
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.211
ELB improved by 0.115452
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.097
ELB improved by 0.114218
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.982
ELB improved by 0.114283
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.877
ELB improved by 0.105772
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.794
ELB improved by 0.082644
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.739
ELB improved by 0.0543795
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.706
ELB improved by 0.0335547
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.684
ELB improved by 0.0219971
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.668
ELB improved by 0.0160761
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.655
ELB improved by 0.0128822
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.644
ELB improved by 0.0109705
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.634
ELB improved by 0.00969434
ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
>
> proc.time()
user system elapsed
2.403 0.177 2.570
graper.Rcheck/graper-Ex.timings
| name | user | system | elapsed | |
| coef.graper | 0.052 | 0.001 | 0.054 | |
| getPIPs | 0.050 | 0.002 | 0.052 | |
| graper | 0.082 | 0.003 | 0.085 | |
| makeExampleData | 0.011 | 0.000 | 0.010 | |
| makeExampleDataWithUnequalGroups | 0.012 | 0.000 | 0.012 | |
| plotELBO | 0.319 | 0.015 | 0.335 | |
| plotGroupPenalties | 1.087 | 0.046 | 1.133 | |
| plotPosterior | 0.642 | 0.003 | 0.645 | |
| predict.graper | 2.047 | 0.016 | 2.062 | |
| print.graper | 0.049 | 0.002 | 0.052 | |