Britta Velten
| Snapshot Date: 2025-11-17 13:45 -0500 (Mon, 17 Nov 2025) |
| git_url: https://git.bioconductor.org/packages/graper |
| git_branch: RELEASE_3_22 |
| git_last_commit: 76fc31b |
| git_last_commit_date: 2025-10-29 10:49:21 -0500 (Wed, 29 Oct 2025) |
| Back to Multiple platform build/check report for BioC 3.22: simplified long |
|
This page was generated on 2025-11-20 12:06 -0500 (Thu, 20 Nov 2025).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 24.04.3 LTS) | x86_64 | 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" | 4615 |
| merida1 | macOS 12.7.6 Monterey | x86_64 | 4.5.2 Patched (2025-11-05 r88990) -- "[Not] Part in a Rumble" | 4610 |
| kjohnson1 | macOS 13.7.5 Ventura | arm64 | 4.5.2 Patched (2025-11-04 r88984) -- "[Not] Part in a Rumble" | 4598 |
| taishan | Linux (openEuler 24.03 LTS) | aarch64 | 4.5.0 (2025-04-11) -- "How About a Twenty-Six" | 4668 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 922/2361 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| graper 1.26.0 (landing page) Britta Velten
| nebbiolo2 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | | ||||||||
| merida1 | macOS 12.7.6 Monterey / x86_64 | OK | OK | OK | OK | | ||||||||
| kjohnson1 | macOS 13.7.5 Ventura / arm64 | OK | OK | OK | OK | | ||||||||
| taishan | Linux (openEuler 24.03 LTS) / aarch64 | OK | OK | OK | ||||||||||
|
To the developers/maintainers of the graper package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: graper |
| Version: 1.26.0 |
| Command: /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:graper.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings graper_1.26.0.tar.gz |
| StartedAt: 2025-11-18 07:22:50 -0500 (Tue, 18 Nov 2025) |
| EndedAt: 2025-11-18 07:23:23 -0500 (Tue, 18 Nov 2025) |
| EllapsedTime: 33.4 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: graper.Rcheck |
| Warnings: 0 |
##############################################################################
##############################################################################
###
### Running command:
###
### /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:graper.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings graper_1.26.0.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/Users/biocbuild/bbs-3.22-bioc/meat/graper.Rcheck’
* using R version 4.5.2 Patched (2025-11-04 r88984)
* using platform: aarch64-apple-darwin20
* R was compiled by
Apple clang version 16.0.0 (clang-1600.0.26.6)
GNU Fortran (GCC) 14.2.0
* running under: macOS Ventura 13.7.8
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.26.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* used C++ compiler: ‘Apple clang version 15.0.0 (clang-1500.0.40.1)’
* used SDK: ‘MacOSX11.3.1.sdk’
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... NOTE
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘testthat.R’
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE
Status: 2 NOTEs
See
‘/Users/biocbuild/bbs-3.22-bioc/meat/graper.Rcheck/00check.log’
for details.
graper.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL graper ### ############################################################################## ############################################################################## * installing to library ‘/Library/Frameworks/R.framework/Versions/4.5-arm64/Resources/library’ * installing *source* package ‘graper’ ... ** this is package ‘graper’ version ‘1.26.0’ ** using staged installation ** libs using C++ compiler: ‘Apple clang version 15.0.0 (clang-1500.0.40.1)’ using SDK: ‘MacOSX11.3.1.sdk’ clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Library/Frameworks/R.framework/Versions/4.5-arm64/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.5-arm64/Resources/library/RcppArmadillo/include' -I'/Library/Frameworks/R.framework/Versions/4.5-arm64/Resources/library/BH/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Library/Frameworks/R.framework/Versions/4.5-arm64/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.5-arm64/Resources/library/RcppArmadillo/include' -I'/Library/Frameworks/R.framework/Versions/4.5-arm64/Resources/library/BH/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c fit_graper.cpp -o fit_graper.o clang++ -arch arm64 -std=gnu++17 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/arm64/lib -o graper.so RcppExports.o fit_graper.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/opt/gfortran/lib/gcc/aarch64-apple-darwin20.0/14.2.0 -L/opt/gfortran/lib -lemutls_w -lheapt_w -lgfortran -lquadmath -F/Library/Frameworks/R.framework/.. -framework R installing to /Library/Frameworks/R.framework/Versions/4.5-arm64/Resources/library/00LOCK-graper/00new/graper/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (graper)
graper.Rcheck/tests/testthat.Rout
R version 4.5.2 Patched (2025-11-04 r88984) -- "[Not] Part in a Rumble"
Copyright (C) 2025 The R Foundation for Statistical Computing
Platform: aarch64-apple-darwin20
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(testthat)
> library(graper)
>
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-853.821
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-581.489
ELB improved by 272.331
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-523.625
ELB improved by 57.8641
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-481.093
ELB improved by 42.5318
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-461.03
ELB improved by 20.0636
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-453.46
ELB improved by 7.56993
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.242
ELB improved by 4.21825
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.601
ELB improved by 3.64093
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.797
ELB improved by 3.80373
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.543
ELB improved by 4.25435
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.769
ELB improved by 4.77375
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.68
ELB improved by 5.08889
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.711
ELB improved by 4.9691
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.176
ELB improved by 4.53449
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.106
ELB improved by 4.07061
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.675
ELB improved by 3.43083
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.107
ELB improved by 2.56836
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.293
ELB improved by 1.81391
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.987
ELB improved by 1.30548
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.984
ELB improved by 1.00316
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.149
ELB improved by 0.835235
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.404
ELB improved by 0.745032
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.707
ELB improved by 0.696474
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.038
ELB improved by 0.668941
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.387
ELB improved by 0.651655
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.747
ELB improved by 0.639723
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.115
ELB improved by 0.631574
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.488
ELB improved by 0.627235
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.861
ELB improved by 0.627143
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.23
ELB improved by 0.631319
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.591
ELB improved by 0.638823
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.943
ELB improved by 0.647506
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.289
ELB improved by 0.654205
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.633
ELB improved by 0.655634
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.984
ELB improved by 0.649681
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.348
ELB improved by 0.635675
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.737
ELB improved by 0.611472
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.168
ELB improved by 0.568784
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.668
ELB improved by 0.499509
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.253
ELB improved by 0.415171
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.913
ELB improved by 0.340195
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.628
ELB improved by 0.285394
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.382
ELB improved by 0.24554
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.171
ELB improved by 0.211402
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.991
ELB improved by 0.179301
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.84
ELB improved by 0.15185
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.708
ELB improved by 0.131972
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.588
ELB improved by 0.119829
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.474
ELB improved by 0.114024
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.361
ELB improved by 0.113081
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.245
ELB improved by 0.115928
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.123
ELB improved by 0.1219
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.992
ELB improved by 0.130629
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.85
ELB improved by 0.141965
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.694
ELB improved by 0.155915
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.522
ELB improved by 0.172622
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.329
ELB improved by 0.192338
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.114
ELB improved by 0.215423
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.872
ELB improved by 0.242313
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.598
ELB improved by 0.27347
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.289
ELB improved by 0.309222
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.939
ELB improved by 0.349403
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.547
ELB improved by 0.392689
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.111
ELB improved by 0.435781
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.638
ELB improved by 0.473261
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.138
ELB improved by 0.499341
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.627
ELB improved by 0.511042
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.118
ELB improved by 0.509567
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.62
ELB improved by 0.498214
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.14
ELB improved by 0.479919
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.682
ELB improved by 0.457377
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.247
ELB improved by 0.435105
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.826
ELB improved by 0.420999
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.401
ELB improved by 0.425189
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.948
ELB improved by 0.45261
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.454
ELB improved by 0.493902
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.897
ELB improved by 0.557973
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.209
ELB improved by 0.687514
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.423
ELB improved by 0.785524
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.719
ELB improved by 0.704026
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.194
ELB improved by 0.524953
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-376.836
ELB improved by 0.358049
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-376.57
ELB improved by 0.266366
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-376.332
ELB improved by 0.237879
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-376.097
ELB improved by 0.234869
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-375.882
ELB improved by 0.215244
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-375.717
ELB improved by 0.165006
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-375.603
ELB improved by 0.114284
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-375.52
ELB improved by 0.0829413
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-375.454
ELB improved by 0.0657761
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-375.4
ELB improved by 0.0540065
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-375.356
ELB improved by 0.0436384
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-375.322
ELB improved by 0.0343245
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-375.295
ELB improved by 0.0267532
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-375.274
ELB improved by 0.0211711
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-375.257
ELB improved by 0.0172714
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-375.242
ELB improved by 0.0145718
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-375.23
ELB improved by 0.0126654
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-375.218
ELB improved by 0.0112794
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-375.208
ELB improved by 0.0102495
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-375.199
ELB improved by 0.00948242
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-868.508
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-569.076
ELB improved by 299.432
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-510.235
ELB improved by 58.841
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-474.591
ELB improved by 35.6441
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-458.53
ELB improved by 16.0603
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-451.049
ELB improved by 7.48156
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.187
ELB improved by 3.86205
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.655
ELB improved by 2.53158
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.598
ELB improved by 2.05672
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.734
ELB improved by 1.8646
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.945
ELB improved by 1.78926
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.173
ELB improved by 1.77124
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.389
ELB improved by 1.78388
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.579
ELB improved by 1.81024
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.749
ELB improved by 1.83034
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.933
ELB improved by 1.81635
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.195
ELB improved by 1.73718
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.623
ELB improved by 1.57279
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.29
ELB improved by 1.33257
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.23
ELB improved by 1.05989
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.421
ELB improved by 0.809085
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.805
ELB improved by 0.615537
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.319
ELB improved by 0.486767
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.907
ELB improved by 0.411799
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.534
ELB improved by 0.373328
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.177
ELB improved by 0.356472
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.824
ELB improved by 0.352707
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.466
ELB improved by 0.358374
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.095
ELB improved by 0.371401
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.705
ELB improved by 0.389802
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.293
ELB improved by 0.411694
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.857
ELB improved by 0.435678
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.396
ELB improved by 0.46116
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.908
ELB improved by 0.488507
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.389
ELB improved by 0.519054
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.834
ELB improved by 0.555062
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.234
ELB improved by 0.599645
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.577
ELB improved by 0.656743
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.846
ELB improved by 0.731361
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.015
ELB improved by 0.830753
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.047
ELB improved by 0.967801
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.882
ELB improved by 1.16543
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.444
ELB improved by 1.43829
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.733
ELB improved by 1.7103
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.871
ELB improved by 1.86211
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.938
ELB improved by 1.93301
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.985
ELB improved by 1.95331
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.227
ELB improved by 1.75786
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.898
ELB improved by 1.32939
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.994
ELB improved by 0.903209
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.426
ELB improved by 0.568122
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.085
ELB improved by 0.341814
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.878
ELB improved by 0.206612
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.747
ELB improved by 0.130586
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.659
ELB improved by 0.0881493
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.595
ELB improved by 0.0636958
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.547
ELB improved by 0.048786
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.508
ELB improved by 0.0390703
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.475
ELB improved by 0.0323188
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.448
ELB improved by 0.0273617
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.424
ELB improved by 0.0235598
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.404
ELB improved by 0.0205452
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.386
ELB improved by 0.0180947
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.37
ELB improved by 0.0160654
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.355
ELB improved by 0.0143614
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.342
ELB improved by 0.0129152
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.331
ELB improved by 0.0116775
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.32
ELB improved by 0.0106114
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.31
ELB improved by 0.00968801
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-883.136
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-597.727
ELB improved by 285.409
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-533.515
ELB improved by 64.2117
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-486.295
ELB improved by 47.2201
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-465.755
ELB improved by 20.54
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-458.788
ELB improved by 6.96695
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-455.566
ELB improved by 3.22211
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-453.417
ELB improved by 2.14919
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-451.66
ELB improved by 1.75727
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.066
ELB improved by 1.59402
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.549
ELB improved by 1.51689
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.075
ELB improved by 1.47349
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.632
ELB improved by 1.44299
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.218
ELB improved by 1.41446
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.84
ELB improved by 1.37802
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.516
ELB improved by 1.32327
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.275
ELB improved by 1.24157
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.146
ELB improved by 1.12914
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.157
ELB improved by 0.989145
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.325
ELB improved by 0.832051
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.651
ELB improved by 0.673645
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.121
ELB improved by 0.530117
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.708
ELB improved by 0.412461
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.384
ELB improved by 0.323887
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.123
ELB improved by 0.26138
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.904
ELB improved by 0.219101
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.713
ELB improved by 0.191137
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.54
ELB improved by 0.172766
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.379
ELB improved by 0.160658
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.227
ELB improved by 0.152617
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.079
ELB improved by 0.147241
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.936
ELB improved by 0.14364
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.795
ELB improved by 0.141245
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.655
ELB improved by 0.139683
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.516
ELB improved by 0.138714
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.378
ELB improved by 0.138178
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.24
ELB improved by 0.137979
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.102
ELB improved by 0.138067
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.964
ELB improved by 0.138426
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.825
ELB improved by 0.139056
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.685
ELB improved by 0.139961
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.543
ELB improved by 0.141127
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.401
ELB improved by 0.142499
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.257
ELB improved by 0.143966
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.112
ELB improved by 0.145359
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.965
ELB improved by 0.146471
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.818
ELB improved by 0.147091
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.671
ELB improved by 0.147042
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.525
ELB improved by 0.14621
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.38
ELB improved by 0.144541
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.238
ELB improved by 0.142038
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.099
ELB improved by 0.138744
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.965
ELB improved by 0.134734
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.835
ELB improved by 0.130108
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.71
ELB improved by 0.124997
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.59
ELB improved by 0.119569
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.476
ELB improved by 0.114041
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.367
ELB improved by 0.108694
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.263
ELB improved by 0.103903
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.163
ELB improved by 0.10017
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.065
ELB improved by 0.0981777
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.966
ELB improved by 0.0988121
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.863
ELB improved by 0.103068
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.752
ELB improved by 0.11154
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.629
ELB improved by 0.123133
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.495
ELB improved by 0.133492
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.359
ELB improved by 0.136136
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.231
ELB improved by 0.128304
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.116
ELB improved by 0.114236
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.016
ELB improved by 0.100056
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.927
ELB improved by 0.0891328
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.844
ELB improved by 0.0830261
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.76
ELB improved by 0.0837006
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.666
ELB improved by 0.094561
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.547
ELB improved by 0.119011
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.394
ELB improved by 0.152858
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.218
ELB improved by 0.175721
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.05
ELB improved by 0.168074
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.913
ELB improved by 0.136992
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.812
ELB improved by 0.101131
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.741
ELB improved by 0.071036
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.692
ELB improved by 0.0492211
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.657
ELB improved by 0.0345893
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.632
ELB improved by 0.0251147
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.613
ELB improved by 0.0190185
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.598
ELB improved by 0.0150554
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.586
ELB improved by 0.0124324
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.575
ELB improved by 0.0106585
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.566
ELB improved by 0.00942892
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-880.049
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-590.597
ELB improved by 289.452
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-532.392
ELB improved by 58.2047
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-490.494
ELB improved by 41.8982
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-469.154
ELB improved by 21.3399
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-460.085
ELB improved by 9.06893
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-454.984
ELB improved by 5.10064
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.897
ELB improved by 4.08732
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.019
ELB improved by 3.87773
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.023
ELB improved by 3.9961
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.792
ELB improved by 4.23085
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.42
ELB improved by 4.37263
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.258
ELB improved by 4.16144
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.772
ELB improved by 3.48628
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.214
ELB improved by 2.55786
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.528
ELB improved by 1.68639
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.472
ELB improved by 1.05552
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.789
ELB improved by 0.682679
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.305
ELB improved by 0.484024
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.928
ELB improved by 0.377885
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.61
ELB improved by 0.317744
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.328
ELB improved by 0.281346
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.07
ELB improved by 0.258199
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.827
ELB improved by 0.24308
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.594
ELB improved by 0.233184
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.367
ELB improved by 0.226882
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.144
ELB improved by 0.223163
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.923
ELB improved by 0.221369
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.702
ELB improved by 0.221072
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.48
ELB improved by 0.222
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.255
ELB improved by 0.224006
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.028
ELB improved by 0.22704
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.797
ELB improved by 0.231127
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.561
ELB improved by 0.236347
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.318
ELB improved by 0.242801
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.068
ELB improved by 0.250582
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.808
ELB improved by 0.259722
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.538
ELB improved by 0.270139
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.256
ELB improved by 0.281574
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.963
ELB improved by 0.293528
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.657
ELB improved by 0.30523
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.342
ELB improved by 0.315653
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.018
ELB improved by 0.323606
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.69
ELB improved by 0.327897
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.363
ELB improved by 0.327527
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.041
ELB improved by 0.321857
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.73
ELB improved by 0.31071
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.436
ELB improved by 0.294427
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.162
ELB improved by 0.273899
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.911
ELB improved by 0.250575
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.685
ELB improved by 0.226345
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.482
ELB improved by 0.203272
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.298
ELB improved by 0.183271
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.13
ELB improved by 0.167904
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.972
ELB improved by 0.158373
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.816
ELB improved by 0.155716
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.655
ELB improved by 0.161199
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.478
ELB improved by 0.177089
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.27
ELB improved by 0.207757
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.01
ELB improved by 0.259942
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.67
ELB improved by 0.34066
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.215
ELB improved by 0.454815
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.63
ELB improved by 0.584541
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.984
ELB improved by 0.646069
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.385
ELB improved by 0.599417
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.872
ELB improved by 0.51283
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.444
ELB improved by 0.428415
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.08
ELB improved by 0.363442
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.748
ELB improved by 0.332012
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.395
ELB improved by 0.353015
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.935
ELB improved by 0.460439
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.296
ELB improved by 0.638653
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.568
ELB improved by 0.727763
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.936
ELB improved by 0.631891
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.464
ELB improved by 0.472244
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.082
ELB improved by 0.38168
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.691
ELB improved by 0.39134
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.158
ELB improved by 0.533338
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.392
ELB improved by 0.765595
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.656
ELB improved by 0.736375
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.204
ELB improved by 0.451525
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.947
ELB improved by 0.257605
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.76
ELB improved by 0.186644
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.557
ELB improved by 0.203434
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.233
ELB improved by 0.323859
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.682
ELB improved by 0.550479
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.022
ELB improved by 0.66001
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.516
ELB improved by 0.506748
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.182
ELB improved by 0.333307
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.965
ELB improved by 0.217281
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.832
ELB improved by 0.132935
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.754
ELB improved by 0.0779591
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.707
ELB improved by 0.0474026
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.675
ELB improved by 0.0313754
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.653
ELB improved by 0.0227317
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.635
ELB improved by 0.0177212
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.62
ELB improved by 0.0145426
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.608
ELB improved by 0.0123403
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.597
ELB improved by 0.0107015
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.588
ELB improved by 0.00941942
ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
>
> proc.time()
user system elapsed
1.088 0.087 1.599
graper.Rcheck/graper-Ex.timings
| name | user | system | elapsed | |
| coef.graper | 0.013 | 0.009 | 0.021 | |
| getPIPs | 0.012 | 0.007 | 0.019 | |
| graper | 0.027 | 0.009 | 0.037 | |
| makeExampleData | 0.002 | 0.001 | 0.002 | |
| makeExampleDataWithUnequalGroups | 0.003 | 0.000 | 0.004 | |
| plotELBO | 0.123 | 0.008 | 0.135 | |
| plotGroupPenalties | 0.467 | 0.015 | 0.508 | |
| plotPosterior | 0.231 | 0.007 | 0.269 | |
| predict.graper | 0.209 | 0.033 | 0.262 | |
| print.graper | 0.011 | 0.005 | 0.015 | |