Britta Velten
| Snapshot Date: 2025-12-11 13:45 -0500 (Thu, 11 Dec 2025) |
| git_url: https://git.bioconductor.org/packages/graper |
| git_branch: RELEASE_3_22 |
| git_last_commit: 76fc31b |
| git_last_commit_date: 2025-10-29 10:49:21 -0500 (Wed, 29 Oct 2025) |
| Back to Multiple platform build/check report for BioC 3.22: simplified long |
|
This page was generated on 2025-12-15 12:09 -0500 (Mon, 15 Dec 2025).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 24.04.3 LTS) | x86_64 | 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" | 4882 |
| merida1 | macOS 12.7.6 Monterey | x86_64 | 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" | 4673 |
| kjohnson1 | macOS 13.7.5 Ventura | arm64 | 4.5.2 Patched (2025-11-04 r88984) -- "[Not] Part in a Rumble" | 4607 |
| taishan | Linux (openEuler 24.03 LTS) | aarch64 | 4.5.0 (2025-04-11) -- "How About a Twenty-Six" | 4671 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 922/2361 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| graper 1.26.0 (landing page) Britta Velten
| nebbiolo2 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | | ||||||||
| merida1 | macOS 12.7.6 Monterey / x86_64 | OK | OK | OK | OK | | ||||||||
| kjohnson1 | macOS 13.7.5 Ventura / arm64 | OK | OK | OK | OK | | ||||||||
| taishan | Linux (openEuler 24.03 LTS) / aarch64 | OK | OK | OK | ||||||||||
|
To the developers/maintainers of the graper package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. - See Martin Grigorov's blog post for how to debug Linux ARM64 related issues on a x86_64 host. |
| Package: graper |
| Version: 1.26.0 |
| Command: /home/biocbuild/R/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/R/R/site-library --no-vignettes --timings graper_1.26.0.tar.gz |
| StartedAt: 2025-12-12 10:52:14 -0000 (Fri, 12 Dec 2025) |
| EndedAt: 2025-12-12 10:53:34 -0000 (Fri, 12 Dec 2025) |
| EllapsedTime: 80.1 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: graper.Rcheck |
| Warnings: 0 |
##############################################################################
##############################################################################
###
### Running command:
###
### /home/biocbuild/R/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/R/R/site-library --no-vignettes --timings graper_1.26.0.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/home/biocbuild/bbs-3.22-bioc/meat/graper.Rcheck’
* using R version 4.5.0 (2025-04-11)
* using platform: aarch64-unknown-linux-gnu
* R was compiled by
aarch64-unknown-linux-gnu-gcc (GCC) 14.2.0
GNU Fortran (GCC) 14.2.0
* running under: openEuler 24.03 (LTS)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.26.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* used C++ compiler: ‘aarch64-unknown-linux-gnu-g++ (GCC) 14.2.0’
* checking installed package size ... INFO
installed size is 6.0Mb
sub-directories of 1Mb or more:
libs 5.8Mb
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... NOTE
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘testthat.R’
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE
Status: 2 NOTEs
See
‘/home/biocbuild/bbs-3.22-bioc/meat/graper.Rcheck/00check.log’
for details.
graper.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/R/R/bin/R CMD INSTALL graper ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/R/R-4.5.0/site-library’ * installing *source* package ‘graper’ ... ** this is package ‘graper’ version ‘1.26.0’ ** using staged installation ** libs using C++ compiler: ‘aarch64-unknown-linux-gnu-g++ (GCC) 14.2.0’ /opt/ohpc/pub/compiler/gcc/14.2.0/bin/aarch64-unknown-linux-gnu-g++ -std=gnu++17 -I"/home/biocbuild/R/R-4.5.0/include" -DNDEBUG -I'/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include' -I'/home/biocbuild/R/R-4.5.0/site-library/RcppArmadillo/include' -I'/home/biocbuild/R/R-4.5.0/site-library/BH/include' -I/usr/local/include -fPIC -g -O2 -Wall -Werror=format-security -c RcppExports.cpp -o RcppExports.o /opt/ohpc/pub/compiler/gcc/14.2.0/bin/aarch64-unknown-linux-gnu-g++ -std=gnu++17 -I"/home/biocbuild/R/R-4.5.0/include" -DNDEBUG -I'/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include' -I'/home/biocbuild/R/R-4.5.0/site-library/RcppArmadillo/include' -I'/home/biocbuild/R/R-4.5.0/site-library/BH/include' -I/usr/local/include -fPIC -g -O2 -Wall -Werror=format-security -c fit_graper.cpp -o fit_graper.o /opt/ohpc/pub/compiler/gcc/14.2.0/bin/aarch64-unknown-linux-gnu-g++ -std=gnu++17 -shared -L/home/biocbuild/R/R-4.5.0/lib -L/usr/local/lib -o graper.so RcppExports.o fit_graper.o -lopenblas -lgfortran -lm -L/home/biocbuild/R/R-4.5.0/lib -lR installing to /home/biocbuild/R/R-4.5.0/site-library/00LOCK-graper/00new/graper/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (graper)
graper.Rcheck/tests/testthat.Rout
R version 4.5.0 (2025-04-11) -- "How About a Twenty-Six"
Copyright (C) 2025 The R Foundation for Statistical Computing
Platform: aarch64-unknown-linux-gnu
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(testthat)
> library(graper)
>
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-862.653
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-558.011
ELB improved by 304.642
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-502.594
ELB improved by 55.4168
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-473.798
ELB improved by 28.7965
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-459.987
ELB improved by 13.8104
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-451.144
ELB improved by 8.84335
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.111
ELB improved by 8.03316
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.534
ELB improved by 8.57673
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.186
ELB improved by 8.34843
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.561
ELB improved by 6.6252
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.023
ELB improved by 4.53793
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.95
ELB improved by 3.07226
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.77
ELB improved by 2.18011
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.185
ELB improved by 1.58555
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.965
ELB improved by 1.22024
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.974
ELB improved by 0.990997
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.184
ELB improved by 0.789234
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.559
ELB improved by 0.62575
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.028
ELB improved by 0.530367
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.542
ELB improved by 0.485884
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.076
ELB improved by 0.465851
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.631
ELB improved by 0.445901
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.215
ELB improved by 0.415073
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.831
ELB improved by 0.3849
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.463
ELB improved by 0.367655
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.1
ELB improved by 0.363363
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.732
ELB improved by 0.367839
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.353
ELB improved by 0.378334
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.959
ELB improved by 0.393966
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.544
ELB improved by 0.415118
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.101
ELB improved by 0.443113
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.621
ELB improved by 0.480157
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.092
ELB improved by 0.529335
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.497
ELB improved by 0.594471
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.818
ELB improved by 0.679447
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.031
ELB improved by 0.786351
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.12
ELB improved by 0.911685
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.079
ELB improved by 1.04086
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.934
ELB improved by 1.1446
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.749
ELB improved by 1.18499
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.614
ELB improved by 1.13501
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.615
ELB improved by 0.999653
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.798
ELB improved by 0.817091
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.162
ELB improved by 0.635864
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.672
ELB improved by 0.489536
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.284
ELB improved by 0.387988
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.96
ELB improved by 0.323947
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.678
ELB improved by 0.282121
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.437
ELB improved by 0.240639
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.256
ELB improved by 0.181722
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.139
ELB improved by 0.11694
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.07
ELB improved by 0.0688869
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.029
ELB improved by 0.041256
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.002
ELB improved by 0.0267235
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.983
ELB improved by 0.0189074
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.969
ELB improved by 0.0143755
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.957
ELB improved by 0.0115123
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.948
ELB improved by 0.00956353
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-888.946
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-628.041
ELB improved by 260.905
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-567.535
ELB improved by 60.5058
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-514.283
ELB improved by 53.2527
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-478.416
ELB improved by 35.8663
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-461.682
ELB improved by 16.734
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-453.9
ELB improved by 7.78233
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.498
ELB improved by 5.40181
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.752
ELB improved by 4.74578
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.188
ELB improved by 4.56415
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.727
ELB improved by 4.461
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.521
ELB improved by 4.20674
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.826
ELB improved by 3.69438
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.842
ELB improved by 2.98383
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.595
ELB improved by 2.24727
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.969
ELB improved by 1.62608
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.804
ELB improved by 1.16496
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.958
ELB improved by 0.846058
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.326
ELB improved by 0.631981
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.838
ELB improved by 0.487511
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.451
ELB improved by 0.387492
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.135
ELB improved by 0.316269
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.87
ELB improved by 0.264315
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.645
ELB improved by 0.225574
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.449
ELB improved by 0.196049
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.276
ELB improved by 0.173063
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.121
ELB improved by 0.154817
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.981
ELB improved by 0.140093
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.853
ELB improved by 0.128044
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.735
ELB improved by 0.118074
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.625
ELB improved by 0.109744
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.522
ELB improved by 0.102727
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.425
ELB improved by 0.0967695
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.334
ELB improved by 0.0916754
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.246
ELB improved by 0.0872879
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.163
ELB improved by 0.0834817
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.083
ELB improved by 0.0801556
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.006
ELB improved by 0.0772277
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.931
ELB improved by 0.0746321
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.859
ELB improved by 0.0723157
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.788
ELB improved by 0.0702366
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.72
ELB improved by 0.0683617
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.653
ELB improved by 0.0666654
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.588
ELB improved by 0.065128
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.525
ELB improved by 0.0637347
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.462
ELB improved by 0.0624741
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.401
ELB improved by 0.0613376
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.34
ELB improved by 0.0603188
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.281
ELB improved by 0.0594133
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.222
ELB improved by 0.0586192
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.164
ELB improved by 0.057937
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.107
ELB improved by 0.0573711
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.05
ELB improved by 0.0569299
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.993
ELB improved by 0.056626
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.937
ELB improved by 0.0564763
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.881
ELB improved by 0.0565001
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.824
ELB improved by 0.0567175
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.767
ELB improved by 0.0571468
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.709
ELB improved by 0.0578003
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.65
ELB improved by 0.0586811
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.59
ELB improved by 0.0597793
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.529
ELB improved by 0.0610706
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.467
ELB improved by 0.062517
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.403
ELB improved by 0.0640712
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.337
ELB improved by 0.0656834
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.27
ELB improved by 0.0673082
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.201
ELB improved by 0.0689094
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.13
ELB improved by 0.070461
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.058
ELB improved by 0.0719457
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.985
ELB improved by 0.0733506
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.91
ELB improved by 0.0746655
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.835
ELB improved by 0.0758812
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.758
ELB improved by 0.0769904
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.68
ELB improved by 0.0779895
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.601
ELB improved by 0.0788803
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.521
ELB improved by 0.0796716
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.441
ELB improved by 0.0803784
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.36
ELB improved by 0.0810196
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.278
ELB improved by 0.081612
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.196
ELB improved by 0.0821617
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.113
ELB improved by 0.0826533
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.03
ELB improved by 0.08304
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.947
ELB improved by 0.0832397
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.864
ELB improved by 0.0831446
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.781
ELB improved by 0.0826457
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.699
ELB improved by 0.0816713
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.619
ELB improved by 0.0802242
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.541
ELB improved by 0.0784027
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.464
ELB improved by 0.0763915
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.39
ELB improved by 0.0744237
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.317
ELB improved by 0.0727242
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.246
ELB improved by 0.0714471
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.175
ELB improved by 0.0706217
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.105
ELB improved by 0.0701236
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.035
ELB improved by 0.0696928
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.966
ELB improved by 0.0690212
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.898
ELB improved by 0.0678957
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.832
ELB improved by 0.0663298
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.768
ELB improved by 0.0646077
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.704
ELB improved by 0.0632403
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.641
ELB improved by 0.0629263
iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.577
ELB improved by 0.0646458
iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.507
ELB improved by 0.070025
iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.424
ELB improved by 0.0822515
iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.316
ELB improved by 0.108256
iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.153
ELB improved by 0.16348
iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.875
ELB improved by 0.277329
iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.409
ELB improved by 0.46684
iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.794
ELB improved by 0.615005
iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.24
ELB improved by 0.553918
iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.83
ELB improved by 0.409446
iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.504
ELB improved by 0.326184
iteration 113
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.196
ELB improved by 0.307805
iteration 114
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.888
ELB improved by 0.308194
iteration 115
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.611
ELB improved by 0.277229
iteration 116
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.397
ELB improved by 0.213425
iteration 117
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.249
ELB improved by 0.147973
iteration 118
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.152
ELB improved by 0.0969811
iteration 119
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.09
ELB improved by 0.0622225
iteration 120
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.05
ELB improved by 0.0402562
iteration 121
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.023
ELB improved by 0.0267696
iteration 122
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.005
ELB improved by 0.018483
iteration 123
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.991
ELB improved by 0.0133211
iteration 124
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.981
ELB improved by 0.0100444
iteration 125
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.973
ELB improved by 0.00791829
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-860.352
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-567.107
ELB improved by 293.246
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-504.687
ELB improved by 62.4191
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-465.407
ELB improved by 39.2807
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.015
ELB improved by 16.3914
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.717
ELB improved by 6.29804
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.15
ELB improved by 3.56781
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.367
ELB improved by 2.78227
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.874
ELB improved by 2.49351
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.516
ELB improved by 2.35806
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.234
ELB improved by 2.28176
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.003
ELB improved by 2.23112
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.816
ELB improved by 2.18663
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.689
ELB improved by 2.12737
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.661
ELB improved by 2.02758
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.798
ELB improved by 1.86362
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.168
ELB improved by 1.62991
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.821
ELB improved by 1.34707
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.77
ELB improved by 1.05057
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.988
ELB improved by 0.7818
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.412
ELB improved by 0.576376
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.971
ELB improved by 0.441352
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.61
ELB improved by 0.360642
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.295
ELB improved by 0.315128
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.004
ELB improved by 0.291119
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.724
ELB improved by 0.280022
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.448
ELB improved by 0.276185
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.172
ELB improved by 0.275408
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.898
ELB improved by 0.274575
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.626
ELB improved by 0.271995
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.358
ELB improved by 0.267373
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.097
ELB improved by 0.261073
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.844
ELB improved by 0.253451
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.599
ELB improved by 0.244698
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.364
ELB improved by 0.234934
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.14
ELB improved by 0.224236
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.927
ELB improved by 0.212585
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.727
ELB improved by 0.199868
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.541
ELB improved by 0.186013
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.37
ELB improved by 0.171189
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.214
ELB improved by 0.155877
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.074
ELB improved by 0.140721
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.947
ELB improved by 0.126301
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.834
ELB improved by 0.112994
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.733
ELB improved by 0.100969
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.643
ELB improved by 0.0902438
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.562
ELB improved by 0.0807515
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.49
ELB improved by 0.0723845
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.425
ELB improved by 0.0650214
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.366
ELB improved by 0.0585415
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.313
ELB improved by 0.0528322
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.266
ELB improved by 0.0477924
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.222
ELB improved by 0.0433331
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.183
ELB improved by 0.0393775
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.147
ELB improved by 0.0358595
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.114
ELB improved by 0.0327225
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.084
ELB improved by 0.0299182
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.057
ELB improved by 0.0274056
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.032
ELB improved by 0.0251493
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.009
ELB improved by 0.023119
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.988
ELB improved by 0.0212886
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.968
ELB improved by 0.0196356
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.95
ELB improved by 0.0181403
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.933
ELB improved by 0.0167856
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.917
ELB improved by 0.0155567
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.903
ELB improved by 0.0144403
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.89
ELB improved by 0.0134248
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.877
ELB improved by 0.0125001
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.865
ELB improved by 0.0116571
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.854
ELB improved by 0.0108876
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.844
ELB improved by 0.0101846
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.835
ELB improved by 0.00954155
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-834.618
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-560.634
ELB improved by 273.984
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-494.957
ELB improved by 65.6763
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-452.714
ELB improved by 42.2433
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.634
ELB improved by 18.0795
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.929
ELB improved by 6.70518
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.372
ELB improved by 3.55731
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.022
ELB improved by 2.34999
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.266
ELB improved by 1.75624
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.822
ELB improved by 1.44387
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.553
ELB improved by 1.2693
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.39
ELB improved by 1.16303
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.297
ELB improved by 1.09231
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.255
ELB improved by 1.04247
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.248
ELB improved by 1.00709
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.265
ELB improved by 0.982761
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.299
ELB improved by 0.966373
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.345
ELB improved by 0.953691
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.406
ELB improved by 0.939064
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.49
ELB improved by 0.916183
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.61
ELB improved by 0.879625
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.784
ELB improved by 0.826369
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.027
ELB improved by 0.756646
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.353
ELB improved by 0.673896
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.769
ELB improved by 0.5841
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.274
ELB improved by 0.494673
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.862
ELB improved by 0.412664
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.519
ELB improved by 0.34267
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.233
ELB improved by 0.286005
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.991
ELB improved by 0.241593
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.784
ELB improved by 0.207471
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.602
ELB improved by 0.181783
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.439
ELB improved by 0.162987
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.289
ELB improved by 0.149682
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.149
ELB improved by 0.140495
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.015
ELB improved by 0.134154
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.885
ELB improved by 0.129592
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.759
ELB improved by 0.125988
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.636
ELB improved by 0.122757
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.517
ELB improved by 0.11951
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.401
ELB improved by 0.116018
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.289
ELB improved by 0.112184
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.181
ELB improved by 0.108008
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.077
ELB improved by 0.103566
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.978
ELB improved by 0.0989796
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.884
ELB improved by 0.0943945
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.794
ELB improved by 0.0899653
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.708
ELB improved by 0.0858417
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.626
ELB improved by 0.0821631
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.547
ELB improved by 0.0790572
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.47
ELB improved by 0.0766404
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.395
ELB improved by 0.0750171
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.321
ELB improved by 0.0742712
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.246
ELB improved by 0.0744477
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.171
ELB improved by 0.0755268
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.093
ELB improved by 0.0774149
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.013
ELB improved by 0.0800112
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.93
ELB improved by 0.0834221
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.842
ELB improved by 0.0883522
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.745
ELB improved by 0.0965966
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.634
ELB improved by 0.111387
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.497
ELB improved by 0.136528
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.326
ELB improved by 0.171175
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.125
ELB improved by 0.200696
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.92
ELB improved by 0.205584
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.73
ELB improved by 0.189937
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.558
ELB improved by 0.172045
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.398
ELB improved by 0.159614
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.247
ELB improved by 0.151304
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.103
ELB improved by 0.143877
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.968
ELB improved by 0.13525
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.842
ELB improved by 0.125608
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.725
ELB improved by 0.11688
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.614
ELB improved by 0.111561
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.501
ELB improved by 0.112691
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.375
ELB improved by 0.125579
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.215
ELB improved by 0.160763
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.983
ELB improved by 0.231597
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.664
ELB improved by 0.318763
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.327
ELB improved by 0.337608
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.052
ELB improved by 0.274969
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.845
ELB improved by 0.207158
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.683
ELB improved by 0.161147
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.553
ELB improved by 0.130361
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.445
ELB improved by 0.107597
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.356
ELB improved by 0.0892394
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.282
ELB improved by 0.0737837
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.222
ELB improved by 0.0606512
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.172
ELB improved by 0.0495914
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.132
ELB improved by 0.0404241
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.099
ELB improved by 0.0329517
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.072
ELB improved by 0.0269488
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.05
ELB improved by 0.0221796
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.031
ELB improved by 0.0184178
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.016
ELB improved by 0.015461
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.003
ELB improved by 0.013137
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.991
ELB improved by 0.0113051
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.981
ELB improved by 0.0098531
ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
>
> proc.time()
user system elapsed
2.893 0.161 3.047
graper.Rcheck/graper-Ex.timings
| name | user | system | elapsed | |
| coef.graper | 0.044 | 0.008 | 0.052 | |
| getPIPs | 0.042 | 0.004 | 0.046 | |
| graper | 0.070 | 0.004 | 0.074 | |
| makeExampleData | 0.009 | 0.000 | 0.009 | |
| makeExampleDataWithUnequalGroups | 0.01 | 0.00 | 0.01 | |
| plotELBO | 0.427 | 0.000 | 0.428 | |
| plotGroupPenalties | 1.559 | 0.056 | 1.619 | |
| plotPosterior | 0.990 | 0.007 | 1.002 | |
| predict.graper | 0.988 | 0.024 | 1.014 | |
| print.graper | 0.052 | 0.012 | 0.063 | |