Britta Velten
| Snapshot Date: 2025-11-14 13:45 -0500 (Fri, 14 Nov 2025) |
| git_url: https://git.bioconductor.org/packages/graper |
| git_branch: RELEASE_3_22 |
| git_last_commit: 76fc31b |
| git_last_commit_date: 2025-10-29 10:49:21 -0500 (Wed, 29 Oct 2025) |
| Back to Multiple platform build/check report for BioC 3.22: simplified long |
|
This page was generated on 2025-11-15 11:58 -0500 (Sat, 15 Nov 2025).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 24.04.3 LTS) | x86_64 | 4.5.1 Patched (2025-08-23 r88802) -- "Great Square Root" | 4903 |
| taishan | Linux (openEuler 24.03 LTS) | aarch64 | 4.5.0 (2025-04-11) -- "How About a Twenty-Six" | 4668 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 922/2361 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| graper 1.26.0 (landing page) Britta Velten
| nebbiolo2 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | | ||||||||
| taishan | Linux (openEuler 24.03 LTS) / aarch64 | OK | OK | OK | ||||||||||
|
To the developers/maintainers of the graper package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. - See Martin Grigorov's blog post for how to debug Linux ARM64 related issues on a x86_64 host. |
| Package: graper |
| Version: 1.26.0 |
| Command: /home/biocbuild/R/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/R/R/site-library --no-vignettes --timings graper_1.26.0.tar.gz |
| StartedAt: 2025-11-14 10:13:50 -0000 (Fri, 14 Nov 2025) |
| EndedAt: 2025-11-14 10:15:08 -0000 (Fri, 14 Nov 2025) |
| EllapsedTime: 78.1 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: graper.Rcheck |
| Warnings: 0 |
##############################################################################
##############################################################################
###
### Running command:
###
### /home/biocbuild/R/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/R/R/site-library --no-vignettes --timings graper_1.26.0.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/home/biocbuild/bbs-3.22-bioc/meat/graper.Rcheck’
* using R version 4.5.0 (2025-04-11)
* using platform: aarch64-unknown-linux-gnu
* R was compiled by
aarch64-unknown-linux-gnu-gcc (GCC) 14.2.0
GNU Fortran (GCC) 14.2.0
* running under: openEuler 24.03 (LTS)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.26.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* used C++ compiler: ‘aarch64-unknown-linux-gnu-g++ (GCC) 14.2.0’
* checking installed package size ... INFO
installed size is 6.0Mb
sub-directories of 1Mb or more:
libs 5.8Mb
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... NOTE
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘testthat.R’
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE
Status: 2 NOTEs
See
‘/home/biocbuild/bbs-3.22-bioc/meat/graper.Rcheck/00check.log’
for details.
graper.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/R/R/bin/R CMD INSTALL graper ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/R/R-4.5.0/site-library’ * installing *source* package ‘graper’ ... ** this is package ‘graper’ version ‘1.26.0’ ** using staged installation ** libs using C++ compiler: ‘aarch64-unknown-linux-gnu-g++ (GCC) 14.2.0’ /opt/ohpc/pub/compiler/gcc/14.2.0/bin/aarch64-unknown-linux-gnu-g++ -std=gnu++17 -I"/home/biocbuild/R/R-4.5.0/include" -DNDEBUG -I'/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include' -I'/home/biocbuild/R/R-4.5.0/site-library/RcppArmadillo/include' -I'/home/biocbuild/R/R-4.5.0/site-library/BH/include' -I/usr/local/include -fPIC -g -O2 -Wall -Werror=format-security -c RcppExports.cpp -o RcppExports.o /opt/ohpc/pub/compiler/gcc/14.2.0/bin/aarch64-unknown-linux-gnu-g++ -std=gnu++17 -I"/home/biocbuild/R/R-4.5.0/include" -DNDEBUG -I'/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include' -I'/home/biocbuild/R/R-4.5.0/site-library/RcppArmadillo/include' -I'/home/biocbuild/R/R-4.5.0/site-library/BH/include' -I/usr/local/include -fPIC -g -O2 -Wall -Werror=format-security -c fit_graper.cpp -o fit_graper.o /opt/ohpc/pub/compiler/gcc/14.2.0/bin/aarch64-unknown-linux-gnu-g++ -std=gnu++17 -shared -L/home/biocbuild/R/R-4.5.0/lib -L/usr/local/lib -o graper.so RcppExports.o fit_graper.o -lopenblas -lgfortran -lm -L/home/biocbuild/R/R-4.5.0/lib -lR installing to /home/biocbuild/R/R-4.5.0/site-library/00LOCK-graper/00new/graper/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (graper)
graper.Rcheck/tests/testthat.Rout
R version 4.5.0 (2025-04-11) -- "How About a Twenty-Six"
Copyright (C) 2025 The R Foundation for Statistical Computing
Platform: aarch64-unknown-linux-gnu
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(testthat)
> library(graper)
>
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-922.148
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-586.867
ELB improved by 335.281
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-528.761
ELB improved by 58.1055
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-496.543
ELB improved by 32.2185
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-482.594
ELB improved by 13.9486
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-475.346
ELB improved by 7.24811
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-469.711
ELB improved by 5.63473
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-464.039
ELB improved by 5.67213
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-457.669
ELB improved by 6.36977
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.467
ELB improved by 7.2024
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.065
ELB improved by 7.40161
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.646
ELB improved by 6.41932
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.841
ELB improved by 4.80498
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.469
ELB improved by 3.37203
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.107
ELB improved by 2.36209
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.385
ELB improved by 1.72201
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.072
ELB improved by 1.31308
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.07
ELB improved by 1.00212
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.317
ELB improved by 0.753111
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.74
ELB improved by 0.57685
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.279
ELB improved by 0.46076
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.896
ELB improved by 0.383058
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.569
ELB improved by 0.32729
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.286
ELB improved by 0.282714
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.043
ELB improved by 0.243365
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.835
ELB improved by 0.207804
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.658
ELB improved by 0.177278
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.505
ELB improved by 0.152878
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.37
ELB improved by 0.134344
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.25
ELB improved by 0.120615
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.139
ELB improved by 0.110579
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.036
ELB improved by 0.103382
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.937
ELB improved by 0.0984525
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.842
ELB improved by 0.0954298
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.748
ELB improved by 0.0941029
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.653
ELB improved by 0.0943696
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.557
ELB improved by 0.0962145
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.457
ELB improved by 0.0997011
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.352
ELB improved by 0.104973
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.24
ELB improved by 0.112267
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.118
ELB improved by 0.12193
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.984
ELB improved by 0.134456
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.833
ELB improved by 0.150534
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.662
ELB improved by 0.171115
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.465
ELB improved by 0.197498
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.233
ELB improved by 0.231404
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.958
ELB improved by 0.274989
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.628
ELB improved by 0.330728
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.226
ELB improved by 0.401259
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.737
ELB improved by 0.489552
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.137
ELB improved by 0.599558
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.401
ELB improved by 0.735753
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.503
ELB improved by 0.898511
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.429
ELB improved by 1.07418
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.202
ELB improved by 1.22722
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.888
ELB improved by 1.31358
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.575
ELB improved by 1.31257
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.343
ELB improved by 1.23286
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.253
ELB improved by 1.08926
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.362
ELB improved by 0.891581
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.699
ELB improved by 0.66285
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.247
ELB improved by 0.452226
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.949
ELB improved by 0.297456
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.751
ELB improved by 0.198195
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.614
ELB improved by 0.136852
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.516
ELB improved by 0.0981968
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.443
ELB improved by 0.0729126
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.387
ELB improved by 0.0557576
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.343
ELB improved by 0.0437504
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.308
ELB improved by 0.0351233
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.28
ELB improved by 0.0287811
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.256
ELB improved by 0.024021
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.235
ELB improved by 0.020379
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.218
ELB improved by 0.0175427
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.202
ELB improved by 0.0152973
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.189
ELB improved by 0.0134931
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.177
ELB improved by 0.0120236
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.166
ELB improved by 0.0108124
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.156
ELB improved by 0.00980345
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-897.457
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-578.609
ELB improved by 318.848
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-521.55
ELB improved by 57.0587
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-487.669
ELB improved by 33.8805
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-472.044
ELB improved by 15.6255
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-465.222
ELB improved by 6.82143
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-461.043
ELB improved by 4.17946
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-457.348
ELB improved by 3.6948
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-453.52
ELB improved by 3.8278
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.334
ELB improved by 4.18595
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.755
ELB improved by 4.57923
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.94
ELB improved by 4.81531
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.158
ELB improved by 4.78163
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.762
ELB improved by 4.39635
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.281
ELB improved by 3.48045
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.95
ELB improved by 2.33102
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.503
ELB improved by 1.44737
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.58
ELB improved by 0.922613
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.939
ELB improved by 0.641372
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.444
ELB improved by 0.494816
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.025
ELB improved by 0.418937
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.644
ELB improved by 0.380897
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.28
ELB improved by 0.363928
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.922
ELB improved by 0.35803
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.567
ELB improved by 0.355632
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.218
ELB improved by 0.348799
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.889
ELB improved by 0.329131
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.592
ELB improved by 0.297238
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.327
ELB improved by 0.26444
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.089
ELB improved by 0.238548
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.869
ELB improved by 0.2195
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.664
ELB improved by 0.204788
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.472
ELB improved by 0.192606
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.29
ELB improved by 0.182097
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.117
ELB improved by 0.172941
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.952
ELB improved by 0.165044
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.793
ELB improved by 0.158388
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.64
ELB improved by 0.152971
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.492
ELB improved by 0.148784
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.346
ELB improved by 0.145813
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.202
ELB improved by 0.144033
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.058
ELB improved by 0.143416
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.914
ELB improved by 0.143926
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.769
ELB improved by 0.145517
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.621
ELB improved by 0.148133
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.469
ELB improved by 0.151695
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.313
ELB improved by 0.156101
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.152
ELB improved by 0.161213
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.985
ELB improved by 0.166852
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.812
ELB improved by 0.172797
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.633
ELB improved by 0.178786
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.449
ELB improved by 0.184522
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.259
ELB improved by 0.189689
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.065
ELB improved by 0.193973
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.868
ELB improved by 0.197086
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.669
ELB improved by 0.198804
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.47
ELB improved by 0.199006
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.272
ELB improved by 0.197731
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.077
ELB improved by 0.195246
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.885
ELB improved by 0.19214
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.696
ELB improved by 0.189456
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.507
ELB improved by 0.188954
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.313
ELB improved by 0.19362
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.104
ELB improved by 0.208588
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.863
ELB improved by 0.241707
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.564
ELB improved by 0.298576
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.2
ELB improved by 0.364048
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.795
ELB improved by 0.405141
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.358
ELB improved by 0.436765
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.857
ELB improved by 0.501352
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.289
ELB improved by 0.56806
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.739
ELB improved by 0.550002
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.33
ELB improved by 0.408499
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.076
ELB improved by 0.254112
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.917
ELB improved by 0.1592
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.806
ELB improved by 0.111358
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.715
ELB improved by 0.0901839
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.631
ELB improved by 0.083953
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.545
ELB improved by 0.0869069
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.45
ELB improved by 0.0949397
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.347
ELB improved by 0.1024
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.244
ELB improved by 0.10288
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.15
ELB improved by 0.094652
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.067
ELB improved by 0.0822563
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.997
ELB improved by 0.070782
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.934
ELB improved by 0.0623132
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.877
ELB improved by 0.0572337
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.821
ELB improved by 0.0562189
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.759
ELB improved by 0.0618085
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.678
ELB improved by 0.0811859
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.545
ELB improved by 0.132904
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.29
ELB improved by 0.254672
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.837
ELB improved by 0.453808
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.297
ELB improved by 0.53956
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.927
ELB improved by 0.369523
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.752
ELB improved by 0.175853
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.672
ELB improved by 0.0796584
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.629
ELB improved by 0.042502
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.601
ELB improved by 0.0279804
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.58
ELB improved by 0.0214151
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.562
ELB improved by 0.0178617
iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.547
ELB improved by 0.0156452
iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.532
ELB improved by 0.0141384
iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.519
ELB improved by 0.0130713
iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.507
ELB improved by 0.0123109
iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.495
ELB improved by 0.0117835
iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.484
ELB improved by 0.0114446
iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.472
ELB improved by 0.0112648
iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.461
ELB improved by 0.0112213
iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.45
ELB improved by 0.0112927
iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.439
ELB improved by 0.0114546
iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.427
ELB improved by 0.0116753
iteration 113
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.415
ELB improved by 0.0119141
iteration 114
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.403
ELB improved by 0.0121212
iteration 115
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.391
ELB improved by 0.0122427
iteration 116
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.378
ELB improved by 0.0122286
iteration 117
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.366
ELB improved by 0.0120436
iteration 118
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.355
ELB improved by 0.0116763
iteration 119
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.343
ELB improved by 0.011142
iteration 120
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.333
ELB improved by 0.0104773
iteration 121
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.323
ELB improved by 0.0097299
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-885.487
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-563.305
ELB improved by 322.182
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-500.379
ELB improved by 62.9258
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-464.422
ELB improved by 35.9571
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-451.398
ELB improved by 13.0241
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.83
ELB improved by 5.56811
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.116
ELB improved by 3.71426
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.065
ELB improved by 3.05086
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.286
ELB improved by 2.77909
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.651
ELB improved by 2.63409
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.125
ELB improved by 2.52671
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.7
ELB improved by 2.42489
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.385
ELB improved by 2.31506
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.201
ELB improved by 2.18381
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.187
ELB improved by 2.01378
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.392
ELB improved by 1.79528
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.851
ELB improved by 1.54052
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.569
ELB improved by 1.28206
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.516
ELB improved by 1.05387
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.644
ELB improved by 0.87169
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.913
ELB improved by 0.731121
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.291
ELB improved by 0.621903
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.752
ELB improved by 0.538321
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.274
ELB improved by 0.478024
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.836
ELB improved by 0.438411
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.42
ELB improved by 0.415623
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.015
ELB improved by 0.405414
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.611
ELB improved by 0.404222
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.201
ELB improved by 0.409593
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.781
ELB improved by 0.420129
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.346
ELB improved by 0.435284
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.891
ELB improved by 0.45515
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.41
ELB improved by 0.480251
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.899
ELB improved by 0.51133
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.35
ELB improved by 0.549151
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.756
ELB improved by 0.594329
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.108
ELB improved by 0.647219
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.401
ELB improved by 0.7077
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.626
ELB improved by 0.774431
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.783
ELB improved by 0.842751
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.882
ELB improved by 0.901366
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.95
ELB improved by 0.93258
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.025
ELB improved by 0.924222
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.138
ELB improved by 0.887205
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.281
ELB improved by 0.857059
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.406
ELB improved by 0.875098
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.46
ELB improved by 0.946144
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.487
ELB improved by 0.972682
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.651
ELB improved by 0.836121
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.039
ELB improved by 0.611999
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.596
ELB improved by 0.442675
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.233
ELB improved by 0.363291
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.88
ELB improved by 0.353501
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.496
ELB improved by 0.383747
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.071
ELB improved by 0.424842
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.591
ELB improved by 0.479809
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.021
ELB improved by 0.569776
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.392
ELB improved by 0.628877
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.857
ELB improved by 0.535253
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.495
ELB improved by 0.361822
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.267
ELB improved by 0.228085
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.12
ELB improved by 0.146985
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.017
ELB improved by 0.103266
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.936
ELB improved by 0.0814114
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.865
ELB improved by 0.0708573
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.798
ELB improved by 0.0663494
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.733
ELB improved by 0.0656799
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.665
ELB improved by 0.0679162
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.592
ELB improved by 0.0725474
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.513
ELB improved by 0.079327
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.424
ELB improved by 0.0885098
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.324
ELB improved by 0.100271
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.213
ELB improved by 0.111487
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.1
ELB improved by 0.112928
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.002
ELB improved by 0.0973615
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.931
ELB improved by 0.0715206
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.883
ELB improved by 0.0480804
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.85
ELB improved by 0.032367
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.827
ELB improved by 0.0232798
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.809
ELB improved by 0.0183783
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.793
ELB improved by 0.0159236
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.778
ELB improved by 0.015023
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.762
ELB improved by 0.0154078
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.745
ELB improved by 0.0173519
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.723
ELB improved by 0.0218871
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.692
ELB improved by 0.0315318
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.64
ELB improved by 0.0518183
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.548
ELB improved by 0.092257
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.391
ELB improved by 0.156395
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.18
ELB improved by 0.21112
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.974
ELB improved by 0.206489
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.818
ELB improved by 0.155431
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.718
ELB improved by 0.10039
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.657
ELB improved by 0.0610657
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.619
ELB improved by 0.0378494
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.594
ELB improved by 0.0250465
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.576
ELB improved by 0.0179098
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.562
ELB improved by 0.0137397
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.551
ELB improved by 0.0111645
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.541
ELB improved by 0.00949185
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-878.294
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-578.734
ELB improved by 299.56
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-521.091
ELB improved by 57.6435
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-483.888
ELB improved by 37.2026
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-467.239
ELB improved by 16.6495
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-459.873
ELB improved by 7.36581
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-455.242
ELB improved by 4.63072
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-451.274
ELB improved by 3.96871
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.369
ELB improved by 3.90464
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.338
ELB improved by 4.03103
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.224
ELB improved by 4.11374
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.326
ELB improved by 3.89855
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.09
ELB improved by 3.23581
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.782
ELB improved by 2.30813
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.306
ELB improved by 1.47518
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.391
ELB improved by 0.915875
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.799
ELB improved by 0.591425
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.39
ELB improved by 0.408885
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.087
ELB improved by 0.303062
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.849
ELB improved by 0.238425
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.652
ELB improved by 0.196459
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.485
ELB improved by 0.167469
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.339
ELB improved by 0.146319
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.208
ELB improved by 0.130209
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.091
ELB improved by 0.117543
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.983
ELB improved by 0.107351
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.884
ELB improved by 0.0990056
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.792
ELB improved by 0.0920766
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.706
ELB improved by 0.0862539
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.625
ELB improved by 0.0813063
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.548
ELB improved by 0.0770557
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.474
ELB improved by 0.0733625
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.404
ELB improved by 0.0701151
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.337
ELB improved by 0.0672233
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.272
ELB improved by 0.0646134
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.21
ELB improved by 0.062225
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.15
ELB improved by 0.0600086
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.092
ELB improved by 0.0579239
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.036
ELB improved by 0.055938
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.982
ELB improved by 0.0540248
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.93
ELB improved by 0.052164
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.88
ELB improved by 0.0503402
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.831
ELB improved by 0.0485426
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.785
ELB improved by 0.0467638
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.74
ELB improved by 0.0449999
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.696
ELB improved by 0.0432496
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.655
ELB improved by 0.0415136
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.615
ELB improved by 0.0397944
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.577
ELB improved by 0.0380957
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.54
ELB improved by 0.0364218
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.506
ELB improved by 0.0347775
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.473
ELB improved by 0.0331677
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.441
ELB improved by 0.0315972
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.411
ELB improved by 0.0300702
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.382
ELB improved by 0.0285906
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.355
ELB improved by 0.0271617
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.329
ELB improved by 0.0257862
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.305
ELB improved by 0.0244659
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.282
ELB improved by 0.0232022
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.26
ELB improved by 0.0219957
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.239
ELB improved by 0.0208467
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.219
ELB improved by 0.0197547
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.2
ELB improved by 0.0187189
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.183
ELB improved by 0.0177382
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.166
ELB improved by 0.0168111
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.15
ELB improved by 0.0159358
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.135
ELB improved by 0.0151106
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.12
ELB improved by 0.0143333
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.107
ELB improved by 0.0136019
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.094
ELB improved by 0.0129142
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.082
ELB improved by 0.0122681
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.07
ELB improved by 0.0116614
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.059
ELB improved by 0.011092
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.048
ELB improved by 0.0105579
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.038
ELB improved by 0.0100571
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.029
ELB improved by 0.00958766
ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
>
> proc.time()
user system elapsed
2.905 0.150 3.047
graper.Rcheck/graper-Ex.timings
| name | user | system | elapsed | |
| coef.graper | 0.048 | 0.004 | 0.052 | |
| getPIPs | 0.039 | 0.008 | 0.047 | |
| graper | 0.069 | 0.004 | 0.073 | |
| makeExampleData | 0.009 | 0.000 | 0.009 | |
| makeExampleDataWithUnequalGroups | 0.01 | 0.00 | 0.01 | |
| plotELBO | 0.412 | 0.004 | 0.418 | |
| plotGroupPenalties | 1.534 | 0.040 | 1.579 | |
| plotPosterior | 0.995 | 0.171 | 1.170 | |
| predict.graper | 0.972 | 0.036 | 1.010 | |
| print.graper | 0.049 | 0.004 | 0.053 | |