Thomas Lin Pedersen
| Snapshot Date: 2018-04-11 16:45:18 -0400 (Wed, 11 Apr 2018) |
| URL: https://git.bioconductor.org/packages/MSGFplus |
| Branch: RELEASE_3_6 |
| Last Commit: 8d682e2 |
| Last Changed Date: 2017-10-30 12:40:39 -0400 (Mon, 30 Oct 2017) |
| Back to Multiple platform build/check report for BioC 3.6 |
|
This page was generated on 2018-04-12 13:25:03 -0400 (Thu, 12 Apr 2018).
| Package 900/1472 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| MSGFplus 1.12.0 Thomas Lin Pedersen
| malbec1 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | OK | | ||||||
| veracruz1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: MSGFplus |
| Version: 1.12.0 |
| Command: rm -rf MSGFplus.buildbin-libdir && mkdir MSGFplus.buildbin-libdir && C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.6/bioc/src/contrib/MSGFplus_1.12.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL --build --library=MSGFplus.buildbin-libdir --merge-multiarch MSGFplus_1.12.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL MSGFplus_1.12.0.zip && rm MSGFplus_1.12.0.tar.gz MSGFplus_1.12.0.zip |
| StartedAt: 2018-04-11 18:14:28 -0400 (Wed, 11 Apr 2018) |
| EndedAt: 2018-04-11 18:17:57 -0400 (Wed, 11 Apr 2018) |
| EllapsedTime: 208.8 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### rm -rf MSGFplus.buildbin-libdir && mkdir MSGFplus.buildbin-libdir && C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.6/bioc/src/contrib/MSGFplus_1.12.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL --build --library=MSGFplus.buildbin-libdir --merge-multiarch MSGFplus_1.12.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL MSGFplus_1.12.0.zip && rm MSGFplus_1.12.0.tar.gz MSGFplus_1.12.0.zip
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install for i386
* installing *source* package 'MSGFplus' ...
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
converting help for package 'MSGFplus'
finding HTML links ... done
MSGFplus-package html
chargeRange html
db html
enzyme html
fragmentation html
getMSGFpar html
instrument html
isotopeError html
lengthRange html
matches html
mods html
msgfAsync-class html
msgfPar-class html
msgfPar html
msgfParChargeRange-class html
msgfParEnzyme-class html
msgfParFragmentation-class html
msgfParFromID html
msgfParGUI html
msgfParInstrument-class html
msgfParIsotopeError-class html
msgfParLengthRange-class html
msgfParMatches-class html
msgfParModification-class html
msgfParModificationList-class html
msgfParNtt-class html
msgfParProtocol-class html
msgfParTda-class html
msgfParTolerance-class html
ntt html
protocol html
runMSGF html
tda html
tolerance html
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL
install for x64
* installing *source* package 'MSGFplus' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'MSGFplus' as MSGFplus_1.12.0.zip
* DONE (MSGFplus)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.6-bioc/R/library'
package 'MSGFplus' successfully unpacked and MD5 sums checked
In R CMD INSTALL