Harpreet Kaur
| Snapshot Date: 2025-10-23 14:17 -0400 (Thu, 23 Oct 2025) |
| git_url: https://git.bioconductor.org/packages/CPSM |
| git_branch: devel |
| git_last_commit: 2fd0047 |
| git_last_commit_date: 2025-09-22 17:11:10 -0400 (Mon, 22 Sep 2025) |
| Back to Multiple platform build/check report for BioC 3.22: simplified long |
|
This page was generated on 2025-10-24 12:04 -0400 (Fri, 24 Oct 2025).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 24.04.3 LTS) | x86_64 | 4.5.1 Patched (2025-08-23 r88802) -- "Great Square Root" | 4898 |
| lconway | macOS 12.7.6 Monterey | x86_64 | 4.5.1 Patched (2025-09-10 r88807) -- "Great Square Root" | 4688 |
| kjohnson3 | macOS 13.7.7 Ventura | arm64 | 4.5.1 Patched (2025-09-10 r88807) -- "Great Square Root" | 4634 |
| taishan | Linux (openEuler 24.03 LTS) | aarch64 | 4.5.0 (2025-04-11) -- "How About a Twenty-Six" | 4658 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 464/2359 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| CPSM 1.1.4 (landing page) Harpreet Kaur
| nebbiolo2 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | | ||||||||
| lconway | macOS 12.7.6 Monterey / x86_64 | OK | OK | OK | OK | | ||||||||
| kjohnson3 | macOS 13.7.7 Ventura / arm64 | OK | OK | OK | OK | | ||||||||
| taishan | Linux (openEuler 24.03 LTS) / aarch64 | OK | OK | OK | ||||||||||
|
To the developers/maintainers of the CPSM package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/CPSM.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: CPSM |
| Version: 1.1.4 |
| Command: /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data CPSM |
| StartedAt: 2025-10-23 16:33:03 -0400 (Thu, 23 Oct 2025) |
| EndedAt: 2025-10-23 16:36:05 -0400 (Thu, 23 Oct 2025) |
| EllapsedTime: 181.8 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: CPSM_1.1.4.tar.gz |
| PackageFileSize: 4.314 MiB |
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### Running command:
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### /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data CPSM
###
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* checking for file ‘CPSM/DESCRIPTION’ ... OK
* preparing ‘CPSM’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... OK
* checking for LF line-endings in source and make files and shell scripts
* checking for empty or unneeded directories
* looking to see if a ‘data/datalist’ file should be added
NB: this package now depends on R (>= 3.5.0)
WARNING: Added dependency on R >= 3.5.0 because serialized objects in
serialize/load version 3 cannot be read in older versions of R.
File(s) containing such objects:
‘CPSM/data/Example_TCGA_LGG_FPKM_data.rda’
‘CPSM/data/Key_Clin_feature_list.rda’
‘CPSM/data/Key_Clin_features_with_PI_list.rda’
‘CPSM/data/Key_PI_list.rda’
‘CPSM/data/Key_univariate_features_list.rda’
‘CPSM/data/Key_univariate_features_with_Clin_list.rda’
‘CPSM/data/New_data.rda’ ‘CPSM/data/Test_Clin.rda’
‘CPSM/data/Test_Norm_data.rda’ ‘CPSM/data/Test_PI_data.rda’
‘CPSM/data/Test_Uni_sig_data.rda’ ‘CPSM/data/Test_results.rda’
‘CPSM/data/Train_Clin.rda’ ‘CPSM/data/Train_Data_Nomogram_input.rda’
‘CPSM/data/Train_Norm_data.rda’ ‘CPSM/data/Train_PI_data.rda’
‘CPSM/data/Train_Uni_sig_data.rda’ ‘CPSM/data/Train_results.rda’
‘CPSM/data/feature_list_for_Nomogram.rda’
‘CPSM/data/mean_median_survival_time_data.rda’
‘CPSM/data/survCurves_data.rda’ ‘CPSM/data/test_FPKM.rda’
‘CPSM/data/train_FPKM.rda’
* building ‘CPSM_1.1.4.tar.gz’