Jitao David Zhang
| Snapshot Date: 2023-04-10 14:00:05 -0400 (Mon, 10 Apr 2023) |
| git_url: https://git.bioconductor.org/packages/rqubic |
| git_branch: RELEASE_3_16 |
| git_last_commit: 40affc2 |
| git_last_commit_date: 2022-11-01 11:06:08 -0400 (Tue, 01 Nov 2022) |
| Back to Multiple platform build/check report for BioC 3.16: simplified long |
|
This page was generated on 2023-04-12 11:05:49 -0400 (Wed, 12 Apr 2023).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 20.04.5 LTS) | x86_64 | 4.2.3 (2023-03-15) -- "Shortstop Beagle" | 4502 |
| palomino4 | Windows Server 2022 Datacenter | x64 | 4.2.3 (2023-03-15 ucrt) -- "Shortstop Beagle" | 4282 |
| lconway | macOS 12.5.1 Monterey | x86_64 | 4.2.3 (2023-03-15) -- "Shortstop Beagle" | 4310 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
|
To the developers/maintainers of the rqubic package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/rqubic.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1728/2183 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| rqubic 1.44.0 (landing page) Jitao David Zhang
| nebbiolo2 | Linux (Ubuntu 20.04.5 LTS) / x86_64 | OK | OK | WARNINGS | | ||||||||
| palomino4 | Windows Server 2022 Datacenter / x64 | OK | OK | WARNINGS | OK | | ||||||||
| lconway | macOS 12.5.1 Monterey / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: rqubic |
| Version: 1.44.0 |
| Command: rm -rf rqubic.buildbin-libdir && mkdir rqubic.buildbin-libdir && F:\biocbuild\bbs-3.16-bioc\R\bin\R.exe CMD INSTALL --build --library=rqubic.buildbin-libdir rqubic_1.44.0.tar.gz |
| StartedAt: 2023-04-11 08:41:28 -0400 (Tue, 11 Apr 2023) |
| EndedAt: 2023-04-11 08:41:55 -0400 (Tue, 11 Apr 2023) |
| EllapsedTime: 26.6 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: rqubic_1.44.0.zip |
| PackageFileSize: 425.7 KiB |
##############################################################################
##############################################################################
###
### Running command:
###
### rm -rf rqubic.buildbin-libdir && mkdir rqubic.buildbin-libdir && F:\biocbuild\bbs-3.16-bioc\R\bin\R.exe CMD INSTALL --build --library=rqubic.buildbin-libdir rqubic_1.44.0.tar.gz
###
##############################################################################
##############################################################################
* installing *source* package 'rqubic' ...
** using staged installation
** libs
gcc -I"F:/biocbuild/bbs-3.16-bioc/R/include" -DNDEBUG -I"C:/rtools42/x86_64-w64-mingw32.static.posix/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c bicluster.c -o bicluster.o
bicluster.c: In function 'seed_intersect_r':
bicluster.c:354:11: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
354 | if (flag=ss) (*m_cnt)++;
| ^~~~
gcc -I"F:/biocbuild/bbs-3.16-bioc/R/include" -DNDEBUG -I"C:/rtools42/x86_64-w64-mingw32.static.posix/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c discretize.c -o discretize.o
In file included from discretize.c:9:
rqubic.h:62:20: warning: 'MINCOL_ATT_NAME' defined but not used [-Wunused-variable]
62 | static const char *MINCOL_ATT_NAME="minimumCol";
| ^~~~~~~~~~~~~~~
rqubic.h:61:20: warning: 'EDGELIST_ATT_NAME' defined but not used [-Wunused-variable]
61 | static const char *EDGELIST_ATT_NAME="edgelist";
| ^~~~~~~~~~~~~~~~~
gcc -I"F:/biocbuild/bbs-3.16-bioc/R/include" -DNDEBUG -I"C:/rtools42/x86_64-w64-mingw32.static.posix/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c fib.c -o fib.o
In file included from fib.c:35:
rqubic.h:62:20: warning: 'MINCOL_ATT_NAME' defined but not used [-Wunused-variable]
62 | static const char *MINCOL_ATT_NAME="minimumCol";
| ^~~~~~~~~~~~~~~
rqubic.h:61:20: warning: 'EDGELIST_ATT_NAME' defined but not used [-Wunused-variable]
61 | static const char *EDGELIST_ATT_NAME="edgelist";
| ^~~~~~~~~~~~~~~~~
gcc -I"F:/biocbuild/bbs-3.16-bioc/R/include" -DNDEBUG -I"C:/rtools42/x86_64-w64-mingw32.static.posix/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c graph.c -o graph.o
gcc -I"F:/biocbuild/bbs-3.16-bioc/R/include" -DNDEBUG -I"C:/rtools42/x86_64-w64-mingw32.static.posix/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c rqubic.c -o rqubic.o
In file included from rqubic.c:5:
rqubic.h:62:20: warning: 'MINCOL_ATT_NAME' defined but not used [-Wunused-variable]
62 | static const char *MINCOL_ATT_NAME="minimumCol";
| ^~~~~~~~~~~~~~~
rqubic.h:61:20: warning: 'EDGELIST_ATT_NAME' defined but not used [-Wunused-variable]
61 | static const char *EDGELIST_ATT_NAME="edgelist";
| ^~~~~~~~~~~~~~~~~
gcc -shared -s -static-libgcc -o rqubic.dll tmp.def bicluster.o discretize.o fib.o graph.o rqubic.o -LC:/rtools42/x86_64-w64-mingw32.static.posix/lib/x64 -LC:/rtools42/x86_64-w64-mingw32.static.posix/lib -LF:/biocbuild/bbs-3.16-bioc/R/bin/x64 -lR
installing to F:/biocbuild/bbs-3.16-bioc/meat/rqubic.buildbin-libdir/00LOCK-rqubic/00new/rqubic/libs/x64
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'rqubic' as rqubic_1.44.0.zip
* DONE (rqubic)