Britta Velten
| Snapshot Date: 2024-07-15 14:00 -0400 (Mon, 15 Jul 2024) |
| git_url: https://git.bioconductor.org/packages/graper |
| git_branch: devel |
| git_last_commit: 7b45fcc |
| git_last_commit_date: 2024-04-30 11:11:42 -0400 (Tue, 30 Apr 2024) |
| Back to Multiple platform build/check report for BioC 3.20: simplified long |
|
This page was generated on 2024-07-16 11:42 -0400 (Tue, 16 Jul 2024).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 22.04.3 LTS) | x86_64 | 4.4.1 (2024-06-14) -- "Race for Your Life" | 4677 |
| palomino6 | Windows Server 2022 Datacenter | x64 | 4.4.1 (2024-06-14 ucrt) -- "Race for Your Life" | 4416 |
| lconway | macOS 12.7.1 Monterey | x86_64 | 4.4.1 (2024-06-14) -- "Race for Your Life" | 4444 |
| kjohnson3 | macOS 13.6.5 Ventura | arm64 | 4.4.1 (2024-06-14) -- "Race for Your Life" | 4393 |
| palomino8 | Windows Server 2022 Datacenter | x64 | 4.4.1 (2024-06-14 ucrt) -- "Race for Your Life" | 4373 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 883/2243 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| graper 1.21.0 (landing page) Britta Velten
| nebbiolo2 | Linux (Ubuntu 22.04.3 LTS) / x86_64 | OK | OK | OK | | ||||||||
| palomino6 | Windows Server 2022 Datacenter / x64 | OK | OK | OK | OK | |||||||||
| lconway | macOS 12.7.1 Monterey / x86_64 | OK | OK | WARNINGS | OK | | ||||||||
| kjohnson3 | macOS 13.6.5 Ventura / arm64 | OK | OK | WARNINGS | OK | | ||||||||
| palomino8 | Windows Server 2022 Datacenter / x64 | OK | OK | OK | OK | |||||||||
|
To the developers/maintainers of the graper package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: graper |
| Version: 1.21.0 |
| Command: /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:graper.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings graper_1.21.0.tar.gz |
| StartedAt: 2024-07-15 20:59:41 -0400 (Mon, 15 Jul 2024) |
| EndedAt: 2024-07-15 21:01:01 -0400 (Mon, 15 Jul 2024) |
| EllapsedTime: 80.1 seconds |
| RetCode: 0 |
| Status: WARNINGS |
| CheckDir: graper.Rcheck |
| Warnings: 1 |
##############################################################################
##############################################################################
###
### Running command:
###
### /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:graper.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings graper_1.21.0.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/Users/biocbuild/bbs-3.20-bioc/meat/graper.Rcheck’
* using R version 4.4.1 (2024-06-14)
* using platform: x86_64-apple-darwin20
* R was compiled by
Apple clang version 14.0.0 (clang-1400.0.29.202)
GNU Fortran (GCC) 12.2.0
* running under: macOS Monterey 12.7.1
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.21.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... WARNING
Found the following significant warnings:
/Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/BH/include/boost/math/tools/config.hpp:23:6: warning: "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" [-W#warnings]
# warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)"
See ‘/Users/biocbuild/bbs-3.20-bioc/meat/graper.Rcheck/00install.out’ for details.
* used C++ compiler: ‘Apple clang version 14.0.0 (clang-1400.0.29.202)’
* used SDK: ‘MacOSX11.3.sdk’
* checking C++ specification ... NOTE
Specified C++11: please drop specification unless essential
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... NOTE
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘testthat.R’
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE
Status: 1 WARNING, 3 NOTEs
See
‘/Users/biocbuild/bbs-3.20-bioc/meat/graper.Rcheck/00check.log’
for details.
graper.Rcheck/00install.out
##############################################################################
##############################################################################
###
### Running command:
###
### /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL graper
###
##############################################################################
##############################################################################
* installing to library ‘/Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library’
* installing *source* package ‘graper’ ...
** using staged installation
** libs
using C++ compiler: ‘Apple clang version 14.0.0 (clang-1400.0.29.202)’
using C++11
using SDK: ‘MacOSX11.3.sdk’
clang++ -arch x86_64 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/RcppArmadillo/include' -I'/Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/BH/include' -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o
clang++ -arch x86_64 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/RcppArmadillo/include' -I'/Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/BH/include' -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c fit_graper.cpp -o fit_graper.o
In file included from fit_graper.cpp:4:
In file included from ./graper_linear_dense_ff.h:2:
In file included from /Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/BH/include/boost/math/special_functions/digamma.hpp:15:
In file included from /Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/BH/include/boost/math/special_functions/math_fwd.hpp:29:
In file included from /Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/BH/include/boost/math/special_functions/detail/round_fwd.hpp:11:
/Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/BH/include/boost/math/tools/config.hpp:23:6: warning: "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" [-W#warnings]
# warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)"
^
1 warning generated.
clang++ -arch x86_64 -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/x86_64/lib -o graper.so RcppExports.o fit_graper.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/opt/gfortran/lib/gcc/x86_64-apple-darwin20.0/12.2.0 -L/opt/gfortran/lib -lgfortran -lquadmath -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/00LOCK-graper/00new/graper/libs
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (graper)
graper.Rcheck/tests/testthat.Rout
R version 4.4.1 (2024-06-14) -- "Race for Your Life"
Copyright (C) 2024 The R Foundation for Statistical Computing
Platform: x86_64-apple-darwin20
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(testthat)
> library(graper)
>
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-851.026
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-585.367
ELB improved by 265.659
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-526.659
ELB improved by 58.7079
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-486.176
ELB improved by 40.4838
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-467.688
ELB improved by 18.4877
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-461.244
ELB improved by 6.44382
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-458.181
ELB improved by 3.06333
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-455.974
ELB improved by 2.20665
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-454.009
ELB improved by 1.96516
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-452.084
ELB improved by 1.92524
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.109
ELB improved by 1.97518
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.034
ELB improved by 2.0751
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.839
ELB improved by 2.19466
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.548
ELB improved by 2.29061
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.238
ELB improved by 2.30981
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.015
ELB improved by 2.22365
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.953
ELB improved by 2.06222
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.114
ELB improved by 1.83883
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.633
ELB improved by 1.48022
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.567
ELB improved by 1.06656
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.807
ELB improved by 0.760004
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.221
ELB improved by 0.58639
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.725
ELB improved by 0.495335
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.29
ELB improved by 0.4357
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.903
ELB improved by 0.386985
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.551
ELB improved by 0.351741
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.219
ELB improved by 0.332126
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.894
ELB improved by 0.324738
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.568
ELB improved by 0.325854
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.234
ELB improved by 0.334138
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.884
ELB improved by 0.350046
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.51
ELB improved by 0.374226
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.103
ELB improved by 0.406712
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.656
ELB improved by 0.447063
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.161
ELB improved by 0.494709
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.612
ELB improved by 0.549191
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.002
ELB improved by 0.610316
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.323
ELB improved by 0.678275
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.57
ELB improved by 0.753636
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.733
ELB improved by 0.837129
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.803
ELB improved by 0.929146
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.775
ELB improved by 1.02851
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.645
ELB improved by 1.12966
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.427
ELB improved by 1.21825
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.158
ELB improved by 1.26939
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.903
ELB improved by 1.25484
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.744
ELB improved by 1.15867
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.753
ELB improved by 0.991577
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.963
ELB improved by 0.789777
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.368
ELB improved by 0.595183
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.933
ELB improved by 0.434807
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.617
ELB improved by 0.315982
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.383
ELB improved by 0.2335
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.205
ELB improved by 0.177989
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.065
ELB improved by 0.140745
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.949
ELB improved by 0.115282
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.852
ELB improved by 0.0972341
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.768
ELB improved by 0.0837743
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.695
ELB improved by 0.0730877
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.631
ELB improved by 0.064035
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.575
ELB improved by 0.0559666
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.527
ELB improved by 0.0486049
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.485
ELB improved by 0.0419219
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.449
ELB improved by 0.0359993
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.418
ELB improved by 0.0309088
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.391
ELB improved by 0.0266515
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.368
ELB improved by 0.023156
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.348
ELB improved by 0.0203089
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.33
ELB improved by 0.0179868
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.314
ELB improved by 0.0160779
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.299
ELB improved by 0.0144907
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.286
ELB improved by 0.0131543
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.274
ELB improved by 0.0120156
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.263
ELB improved by 0.0110354
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.253
ELB improved by 0.0101841
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.243
ELB improved by 0.00943959
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-862.352
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-599.544
ELB improved by 262.809
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-537.942
ELB improved by 61.602
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-490.176
ELB improved by 47.7656
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-464.978
ELB improved by 25.1985
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-453.729
ELB improved by 11.2489
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.235
ELB improved by 6.49397
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.501
ELB improved by 5.73338
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.495
ELB improved by 6.00671
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.26
ELB improved by 6.23448
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.473
ELB improved by 5.78744
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.842
ELB improved by 4.63112
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.461
ELB improved by 3.38035
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.018
ELB improved by 2.44277
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.21
ELB improved by 1.80871
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.846
ELB improved by 1.36404
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.844
ELB improved by 1.00149
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.144
ELB improved by 0.699722
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.677
ELB improved by 0.467733
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.362
ELB improved by 0.314924
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.135
ELB improved by 0.226346
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.959
ELB improved by 0.176226
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.813
ELB improved by 0.146351
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.686
ELB improved by 0.127189
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.572
ELB improved by 0.114127
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.467
ELB improved by 0.104845
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.369
ELB improved by 0.09807
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.276
ELB improved by 0.0930359
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.186
ELB improved by 0.0892417
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.1
ELB improved by 0.0863408
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.016
ELB improved by 0.0840843
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.934
ELB improved by 0.0822884
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.853
ELB improved by 0.0808164
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.773
ELB improved by 0.0795662
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.695
ELB improved by 0.0784628
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.617
ELB improved by 0.0774521
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.541
ELB improved by 0.0764976
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.465
ELB improved by 0.0755765
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.391
ELB improved by 0.074677
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.317
ELB improved by 0.0737959
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.244
ELB improved by 0.0729366
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.172
ELB improved by 0.0721072
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.1
ELB improved by 0.0713187
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.03
ELB improved by 0.0705835
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.96
ELB improved by 0.0699147
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.891
ELB improved by 0.0693251
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.822
ELB improved by 0.0688262
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.753
ELB improved by 0.0684282
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.685
ELB improved by 0.0681392
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.617
ELB improved by 0.0679654
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.549
ELB improved by 0.0679105
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.481
ELB improved by 0.0679758
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.413
ELB improved by 0.0681597
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.345
ELB improved by 0.0684576
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.276
ELB improved by 0.0688618
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.207
ELB improved by 0.0693609
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.137
ELB improved by 0.06994
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.066
ELB improved by 0.0705803
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.995
ELB improved by 0.0712595
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.923
ELB improved by 0.0719519
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.85
ELB improved by 0.0726289
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.777
ELB improved by 0.0732602
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.703
ELB improved by 0.0738144
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.629
ELB improved by 0.07426
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.554
ELB improved by 0.0745666
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.48
ELB improved by 0.0747048
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.405
ELB improved by 0.0746468
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.331
ELB improved by 0.0743657
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.257
ELB improved by 0.0738354
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.184
ELB improved by 0.0730307
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.112
ELB improved by 0.0719284
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.041
ELB improved by 0.0705103
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.972
ELB improved by 0.0687665
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.906
ELB improved by 0.0666986
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.841
ELB improved by 0.0643219
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.78
ELB improved by 0.0616639
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.721
ELB improved by 0.0587621
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.665
ELB improved by 0.0556585
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.613
ELB improved by 0.0523959
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.564
ELB improved by 0.0490152
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.518
ELB improved by 0.0455549
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.476
ELB improved by 0.0420535
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.438
ELB improved by 0.0385515
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.403
ELB improved by 0.035093
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.371
ELB improved by 0.0317252
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.343
ELB improved by 0.0284959
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.317
ELB improved by 0.0254489
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.294
ELB improved by 0.02262
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.274
ELB improved by 0.0200342
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.257
ELB improved by 0.0177043
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.241
ELB improved by 0.0156313
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.227
ELB improved by 0.0138069
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.215
ELB improved by 0.0122154
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.204
ELB improved by 0.0108366
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.195
ELB improved by 0.00964783
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-904.777
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-583.622
ELB improved by 321.155
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-522.73
ELB improved by 60.892
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-482.242
ELB improved by 40.4879
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-462.801
ELB improved by 19.4408
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-455.037
ELB improved by 7.76358
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.748
ELB improved by 4.28931
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.393
ELB improved by 3.35465
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.382
ELB improved by 3.01145
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.522
ELB improved by 2.85978
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.75
ELB improved by 2.77224
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.047
ELB improved by 2.70291
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.424
ELB improved by 2.62268
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.928
ELB improved by 2.49647
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.644
ELB improved by 2.28339
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.685
ELB improved by 1.95908
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.132
ELB improved by 1.55309
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.985
ELB improved by 1.14751
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.168
ELB improved by 0.816654
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.585
ELB improved by 0.583414
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.154
ELB improved by 0.431116
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.821
ELB improved by 0.332909
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.553
ELB improved by 0.267564
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.331
ELB improved by 0.221919
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.143
ELB improved by 0.188554
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.979
ELB improved by 0.163315
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.836
ELB improved by 0.143765
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.707
ELB improved by 0.128373
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.591
ELB improved by 0.116119
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.485
ELB improved by 0.106295
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.386
ELB improved by 0.0983988
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.294
ELB improved by 0.092068
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.207
ELB improved by 0.0870382
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.124
ELB improved by 0.0831154
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.044
ELB improved by 0.0801572
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.966
ELB improved by 0.0780599
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.889
ELB improved by 0.0767496
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.813
ELB improved by 0.0761756
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.737
ELB improved by 0.0763065
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.66
ELB improved by 0.0771266
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.581
ELB improved by 0.0786332
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.5
ELB improved by 0.0808347
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.416
ELB improved by 0.0837479
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.329
ELB improved by 0.0873958
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.237
ELB improved by 0.0918037
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.14
ELB improved by 0.0969952
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.037
ELB improved by 0.102987
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.927
ELB improved by 0.10978
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.81
ELB improved by 0.117357
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.684
ELB improved by 0.12567
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.55
ELB improved by 0.134643
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.406
ELB improved by 0.144168
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.251
ELB improved by 0.154122
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.087
ELB improved by 0.164382
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.912
ELB improved by 0.174844
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.727
ELB improved by 0.185442
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.531
ELB improved by 0.196124
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.324
ELB improved by 0.206806
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.107
ELB improved by 0.217293
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.879
ELB improved by 0.227218
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.643
ELB improved by 0.236074
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.4
ELB improved by 0.243313
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.151
ELB improved by 0.248462
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.9
ELB improved by 0.251145
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.649
ELB improved by 0.251049
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.401
ELB improved by 0.24791
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.16
ELB improved by 0.241581
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.928
ELB improved by 0.232146
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.708
ELB improved by 0.22001
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.502
ELB improved by 0.205924
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.311
ELB improved by 0.190922
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.135
ELB improved by 0.176208
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.972
ELB improved by 0.163035
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.819
ELB improved by 0.152632
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.673
ELB improved by 0.146186
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.528
ELB improved by 0.144866
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.378
ELB improved by 0.149785
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.216
ELB improved by 0.161653
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.037
ELB improved by 0.17952
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.839
ELB improved by 0.197907
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.634
ELB improved by 0.204598
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.447
ELB improved by 0.187609
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.297
ELB improved by 0.149944
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.189
ELB improved by 0.107791
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.116
ELB improved by 0.0734487
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.066
ELB improved by 0.0496127
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.032
ELB improved by 0.0341956
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.007
ELB improved by 0.0244349
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.989
ELB improved by 0.018228
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.975
ELB improved by 0.0142105
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.963
ELB improved by 0.011545
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.954
ELB improved by 0.00972492
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-911.414
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-592.752
ELB improved by 318.662
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-532.473
ELB improved by 60.2792
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-492.189
ELB improved by 40.2837
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-471.06
ELB improved by 21.1286
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-461.352
ELB improved by 9.70824
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-456.435
ELB improved by 4.91685
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-453.127
ELB improved by 3.30799
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.349
ELB improved by 2.77854
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.769
ELB improved by 2.58002
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.28
ELB improved by 2.48875
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.849
ELB improved by 2.4309
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.49
ELB improved by 2.3595
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.262
ELB improved by 2.22732
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.262
ELB improved by 2.00053
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.574
ELB improved by 1.68756
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.23
ELB improved by 1.34449
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.19
ELB improved by 1.03973
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.377
ELB improved by 0.812924
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.711
ELB improved by 0.665653
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.133
ELB improved by 0.578595
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.603
ELB improved by 0.529633
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.101
ELB improved by 0.501776
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.617
ELB improved by 0.48392
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.148
ELB improved by 0.469432
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.693
ELB improved by 0.454778
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.255
ELB improved by 0.438543
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.834
ELB improved by 0.420741
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.432
ELB improved by 0.40229
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.047
ELB improved by 0.384662
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.677
ELB improved by 0.369788
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.317
ELB improved by 0.360269
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.957
ELB improved by 0.359918
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.583
ELB improved by 0.373969
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.177
ELB improved by 0.40571
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.733
ELB improved by 0.44395
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.276
ELB improved by 0.457113
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.845
ELB improved by 0.431347
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.455
ELB improved by 0.389521
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.104
ELB improved by 0.351182
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.784
ELB improved by 0.320101
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.489
ELB improved by 0.294714
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.216
ELB improved by 0.273218
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.962
ELB improved by 0.254352
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.725
ELB improved by 0.237265
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.503
ELB improved by 0.221284
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.298
ELB improved by 0.205765
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.107
ELB improved by 0.190071
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.934
ELB improved by 0.173685
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.777
ELB improved by 0.156391
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.639
ELB improved by 0.138384
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.519
ELB improved by 0.120217
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.416
ELB improved by 0.102612
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.33
ELB improved by 0.0862447
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.258
ELB improved by 0.0715984
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.199
ELB improved by 0.0589212
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.151
ELB improved by 0.0482514
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.112
ELB improved by 0.039475
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.079
ELB improved by 0.0323864
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.053
ELB improved by 0.0267396
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.03
ELB improved by 0.0222843
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.011
ELB improved by 0.0187887
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.995
ELB improved by 0.016051
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.982
ELB improved by 0.0139029
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.969
ELB improved by 0.0122087
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.958
ELB improved by 0.0108616
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.949
ELB improved by 0.00977902
ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
>
> proc.time()
user system elapsed
2.565 0.266 2.842
graper.Rcheck/graper-Ex.timings
| name | user | system | elapsed | |
| coef.graper | 0.053 | 0.019 | 0.072 | |
| getPIPs | 0.052 | 0.017 | 0.070 | |
| graper | 0.079 | 0.023 | 0.103 | |
| makeExampleData | 0.010 | 0.001 | 0.011 | |
| makeExampleDataWithUnequalGroups | 0.031 | 0.005 | 0.036 | |
| plotELBO | 0.226 | 0.021 | 0.250 | |
| plotGroupPenalties | 0.825 | 0.030 | 0.863 | |
| plotPosterior | 0.589 | 0.020 | 0.614 | |
| predict.graper | 2.032 | 0.092 | 2.137 | |
| print.graper | 0.048 | 0.012 | 0.060 | |