Britta Velten
| Snapshot Date: 2024-09-11 14:00 -0400 (Wed, 11 Sep 2024) |
| git_url: https://git.bioconductor.org/packages/graper |
| git_branch: devel |
| git_last_commit: 7b45fcc |
| git_last_commit_date: 2024-04-30 11:11:42 -0400 (Tue, 30 Apr 2024) |
| Back to Multiple platform build/check report for BioC 3.20: simplified long |
|
This page was generated on 2024-09-12 11:40 -0400 (Thu, 12 Sep 2024).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 22.04.3 LTS) | x86_64 | 4.4.1 (2024-06-14) -- "Race for Your Life" | 4713 |
| teran2 | Linux (Ubuntu 24.04.1 LTS) | x86_64 | 4.4.1 (2024-06-14) -- "Race for Your Life" | 4444 |
| palomino8 | Windows Server 2022 Datacenter | x64 | 4.4.1 (2024-06-14 ucrt) -- "Race for Your Life" | 4450 |
| lconway | macOS 12.7.1 Monterey | x86_64 | 4.4.1 (2024-06-14) -- "Race for Your Life" | 4483 |
| kjohnson3 | macOS 13.6.5 Ventura | arm64 | 4.4.1 (2024-06-14) -- "Race for Your Life" | 4430 |
| kunpeng2 | Linux (openEuler 22.03 LTS-SP1) | aarch64 | 4.4.1 (2024-06-14) -- "Race for Your Life" | 4428 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 890/2258 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| graper 1.21.0 (landing page) Britta Velten
| nebbiolo2 | Linux (Ubuntu 22.04.3 LTS) / x86_64 | OK | OK | OK | | ||||||||
| teran2 | Linux (Ubuntu 24.04.1 LTS) / x86_64 | OK | OK | OK | ||||||||||
| palomino8 | Windows Server 2022 Datacenter / x64 | OK | OK | OK | OK | | ||||||||
| lconway | macOS 12.7.1 Monterey / x86_64 | OK | OK | WARNINGS | OK | | ||||||||
| kjohnson3 | macOS 13.6.5 Ventura / arm64 | OK | OK | WARNINGS | OK | | ||||||||
| kunpeng2 | Linux (openEuler 22.03 LTS-SP1) / aarch64 | OK | OK | OK | ||||||||||
|
To the developers/maintainers of the graper package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: graper |
| Version: 1.21.0 |
| Command: /home/biocbuild/bbs-3.20-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.20-bioc/R/site-library --timings graper_1.21.0.tar.gz |
| StartedAt: 2024-09-11 23:21:24 -0400 (Wed, 11 Sep 2024) |
| EndedAt: 2024-09-11 23:22:45 -0400 (Wed, 11 Sep 2024) |
| EllapsedTime: 80.1 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: graper.Rcheck |
| Warnings: 0 |
##############################################################################
##############################################################################
###
### Running command:
###
### /home/biocbuild/bbs-3.20-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.20-bioc/R/site-library --timings graper_1.21.0.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/home/biocbuild/bbs-3.20-bioc/meat/graper.Rcheck’
* using R version 4.4.1 (2024-06-14)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
gcc (Ubuntu 11.4.0-1ubuntu1~22.04) 11.4.0
GNU Fortran (Ubuntu 11.4.0-1ubuntu1~22.04) 11.4.0
* running under: Ubuntu 22.04.5 LTS
* using session charset: UTF-8
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.21.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* used C++ compiler: ‘g++ (Ubuntu 11.4.0-1ubuntu1~22.04) 11.4.0’
* checking C++ specification ... NOTE
Specified C++11: please drop specification unless essential
* checking installed package size ... NOTE
installed size is 6.4Mb
sub-directories of 1Mb or more:
libs 6.3Mb
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... NOTE
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘testthat.R’
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... OK
* checking PDF version of manual ... OK
* DONE
Status: 4 NOTEs
See
‘/home/biocbuild/bbs-3.20-bioc/meat/graper.Rcheck/00check.log’
for details.
graper.Rcheck/00install.out
##############################################################################
##############################################################################
###
### Running command:
###
### /home/biocbuild/bbs-3.20-bioc/R/bin/R CMD INSTALL graper
###
##############################################################################
##############################################################################
* installing to library ‘/home/biocbuild/bbs-3.20-bioc/R/site-library’
* installing *source* package ‘graper’ ...
** using staged installation
** libs
using C++ compiler: ‘g++ (Ubuntu 11.4.0-1ubuntu1~22.04) 11.4.0’
using C++11
g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.20-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.20-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.20-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.20-bioc/R/site-library/BH/include' -I/usr/local/include -fpic -g -O2 -Wall -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.20-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.20-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.20-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.20-bioc/R/site-library/BH/include' -I/usr/local/include -fpic -g -O2 -Wall -c fit_graper.cpp -o fit_graper.o
In file included from /home/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/math/special_functions/detail/round_fwd.hpp:11,
from /home/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/math/special_functions/math_fwd.hpp:29,
from /home/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/math/special_functions/digamma.hpp:15,
from graper_linear_dense_ff.h:2,
from fit_graper.cpp:4:
/home/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/math/tools/config.hpp:23:6: warning: #warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" [-Wcpp]
23 | # warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)"
| ^~~~~~~
g++ -std=gnu++11 -shared -L/home/biocbuild/bbs-3.20-bioc/R/lib -L/usr/local/lib -o graper.so RcppExports.o fit_graper.o -llapack -L/home/biocbuild/bbs-3.20-bioc/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/biocbuild/bbs-3.20-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.20-bioc/R/site-library/00LOCK-graper/00new/graper/libs
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (graper)
graper.Rcheck/tests/testthat.Rout
R version 4.4.1 (2024-06-14) -- "Race for Your Life"
Copyright (C) 2024 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(testthat)
> library(graper)
>
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-868.477
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-582.774
ELB improved by 285.703
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-520.661
ELB improved by 62.1122
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-474.979
ELB improved by 45.682
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-454.132
ELB improved by 20.8473
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.145
ELB improved by 7.98698
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.795
ELB improved by 4.34992
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.54
ELB improved by 3.25571
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.648
ELB improved by 2.89148
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.869
ELB improved by 2.77929
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.116
ELB improved by 2.75316
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.374
ELB improved by 2.74123
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.667
ELB improved by 2.70706
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.043
ELB improved by 2.62423
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.574
ELB improved by 2.46893
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.347
ELB improved by 2.22735
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.433
ELB improved by 1.91423
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.86
ELB improved by 1.57274
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.613
ELB improved by 1.24715
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.645
ELB improved by 0.967372
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.9
ELB improved by 0.745198
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.324
ELB improved by 0.576071
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.872
ELB improved by 0.452425
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.505
ELB improved by 0.366822
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.195
ELB improved by 0.3094
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.925
ELB improved by 0.270537
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.681
ELB improved by 0.243371
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.458
ELB improved by 0.223727
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.249
ELB improved by 0.209164
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.05
ELB improved by 0.198201
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.861
ELB improved by 0.18987
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.677
ELB improved by 0.18348
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.499
ELB improved by 0.178506
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.324
ELB improved by 0.174527
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.153
ELB improved by 0.171211
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.984
ELB improved by 0.168299
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.819
ELB improved by 0.165622
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.656
ELB improved by 0.163104
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.495
ELB improved by 0.160771
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.336
ELB improved by 0.158757
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.179
ELB improved by 0.157293
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.022
ELB improved by 0.156666
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.865
ELB improved by 0.157156
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.706
ELB improved by 0.158916
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.544
ELB improved by 0.161821
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.379
ELB improved by 0.165372
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.21
ELB improved by 0.168803
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.039
ELB improved by 0.171408
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.866
ELB improved by 0.172882
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.693
ELB improved by 0.173307
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.52
ELB improved by 0.172853
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.348
ELB improved by 0.171518
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.179
ELB improved by 0.169124
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.014
ELB improved by 0.165456
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.853
ELB improved by 0.160412
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.699
ELB improved by 0.154045
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.553
ELB improved by 0.146522
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.415
ELB improved by 0.13807
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.286
ELB improved by 0.128935
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.166
ELB improved by 0.119365
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.057
ELB improved by 0.109605
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.957
ELB improved by 0.0998851
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.866
ELB improved by 0.0904104
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.785
ELB improved by 0.0813547
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.712
ELB improved by 0.0728535
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.647
ELB improved by 0.0650019
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.589
ELB improved by 0.0578546
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.538
ELB improved by 0.0514301
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.492
ELB improved by 0.0457157
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.452
ELB improved by 0.0406753
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.415
ELB improved by 0.0362569
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.383
ELB improved by 0.0323994
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.354
ELB improved by 0.0290392
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.328
ELB improved by 0.0261136
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.304
ELB improved by 0.0235644
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.283
ELB improved by 0.0213382
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.263
ELB improved by 0.0193881
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.246
ELB improved by 0.0176728
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.23
ELB improved by 0.0161565
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.215
ELB improved by 0.0148087
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.201
ELB improved by 0.0136033
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.189
ELB improved by 0.0125187
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.177
ELB improved by 0.0115368
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.166
ELB improved by 0.0106429
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.157
ELB improved by 0.00982547
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-844.198
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-563.251
ELB improved by 280.948
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-503.813
ELB improved by 59.4376
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-468.504
ELB improved by 35.3089
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-454.227
ELB improved by 14.2767
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.229
ELB improved by 5.99815
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.214
ELB improved by 4.01523
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.559
ELB improved by 3.65458
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.858
ELB improved by 3.7018
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.947
ELB improved by 3.91081
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.74
ELB improved by 4.20673
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.284
ELB improved by 4.45574
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.898
ELB improved by 4.38667
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.116
ELB improved by 3.78175
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.321
ELB improved by 2.79526
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.488
ELB improved by 1.83301
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.345
ELB improved by 1.14256
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.62
ELB improved by 0.724763
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.132
ELB improved by 0.488523
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.777
ELB improved by 0.35433
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.503
ELB improved by 0.274063
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.281
ELB improved by 0.222291
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.095
ELB improved by 0.186191
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.936
ELB improved by 0.159291
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.797
ELB improved by 0.138217
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.676
ELB improved by 0.121117
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.569
ELB improved by 0.106907
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.475
ELB improved by 0.0949061
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.39
ELB improved by 0.084663
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.314
ELB improved by 0.0758565
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.246
ELB improved by 0.0682474
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.184
ELB improved by 0.0616484
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.128
ELB improved by 0.0559073
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.077
ELB improved by 0.050897
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.031
ELB improved by 0.0465098
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.988
ELB improved by 0.042654
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.949
ELB improved by 0.0392516
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.913
ELB improved by 0.0362364
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.879
ELB improved by 0.0335526
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.848
ELB improved by 0.0311534
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.819
ELB improved by 0.0289993
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.792
ELB improved by 0.0270573
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.767
ELB improved by 0.0252996
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.743
ELB improved by 0.0237028
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.721
ELB improved by 0.0222472
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.7
ELB improved by 0.0209159
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.68
ELB improved by 0.0196944
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.661
ELB improved by 0.0185706
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.644
ELB improved by 0.0175339
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.627
ELB improved by 0.0165749
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.612
ELB improved by 0.0156859
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.597
ELB improved by 0.0148598
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.583
ELB improved by 0.0140906
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.569
ELB improved by 0.013373
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.557
ELB improved by 0.0127023
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.545
ELB improved by 0.0120744
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.533
ELB improved by 0.0114857
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.522
ELB improved by 0.0109329
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.512
ELB improved by 0.0104131
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.502
ELB improved by 0.00992375
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-867.029
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-570.772
ELB improved by 296.257
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-506.637
ELB improved by 64.1345
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-462.27
ELB improved by 44.3667
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.301
ELB improved by 20.969
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.398
ELB improved by 9.90312
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.804
ELB improved by 6.59474
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.194
ELB improved by 5.60946
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.709
ELB improved by 5.48498
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.004
ELB improved by 5.70468
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.183
ELB improved by 5.82141
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.795
ELB improved by 5.38831
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.473
ELB improved by 4.32177
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.416
ELB improved by 3.05726
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.358
ELB improved by 2.05783
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.95
ELB improved by 1.4078
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.973
ELB improved by 0.976836
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.278
ELB improved by 0.695047
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.747
ELB improved by 0.530738
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.311
ELB improved by 0.436891
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.933
ELB improved by 0.377845
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.597
ELB improved by 0.335535
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.295
ELB improved by 0.302152
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.021
ELB improved by 0.274462
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.77
ELB improved by 0.250905
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.539
ELB improved by 0.230454
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.327
ELB improved by 0.212339
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.131
ELB improved by 0.196029
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.95
ELB improved by 0.181199
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.782
ELB improved by 0.167676
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.627
ELB improved by 0.155357
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.482
ELB improved by 0.144147
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.349
ELB improved by 0.133897
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.224
ELB improved by 0.124378
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.109
ELB improved by 0.115307
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.002
ELB improved by 0.106446
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.905
ELB improved by 0.0977083
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.815
ELB improved by 0.0892025
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.734
ELB improved by 0.0811507
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.661
ELB improved by 0.073755
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.593
ELB improved by 0.0671154
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.532
ELB improved by 0.0612296
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.476
ELB improved by 0.0560365
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.425
ELB improved by 0.0514577
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.377
ELB improved by 0.0474208
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.333
ELB improved by 0.0438679
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.293
ELB improved by 0.0407558
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.255
ELB improved by 0.0380542
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.219
ELB improved by 0.0357422
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.185
ELB improved by 0.0338059
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.153
ELB improved by 0.0322334
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.122
ELB improved by 0.031007
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.092
ELB improved by 0.0300913
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.062
ELB improved by 0.029416
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.033
ELB improved by 0.0288605
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.005
ELB improved by 0.0282516
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.978
ELB improved by 0.0273935
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.952
ELB improved by 0.0261347
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.927
ELB improved by 0.0244427
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.905
ELB improved by 0.0224302
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.885
ELB improved by 0.0203026
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.866
ELB improved by 0.0182625
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.85
ELB improved by 0.0164394
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.835
ELB improved by 0.0148766
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.821
ELB improved by 0.0135584
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.809
ELB improved by 0.0124435
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.797
ELB improved by 0.0114883
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.787
ELB improved by 0.0106567
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.777
ELB improved by 0.00992203
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-884.034
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-589.004
ELB improved by 295.03
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-524.85
ELB improved by 64.1546
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-483.155
ELB improved by 41.6949
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-463.658
ELB improved by 19.4967
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-455.035
ELB improved by 8.62342
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.67
ELB improved by 5.36425
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.022
ELB improved by 4.64794
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.25
ELB improved by 4.7727
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.052
ELB improved by 5.19755
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.515
ELB improved by 5.53753
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.167
ELB improved by 5.34754
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.724
ELB improved by 4.4432
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.535
ELB improved by 3.18916
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.452
ELB improved by 2.08275
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.129
ELB improved by 1.32346
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.263
ELB improved by 0.865946
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.662
ELB improved by 0.600698
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.218
ELB improved by 0.443933
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.871
ELB improved by 0.34656
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.589
ELB improved by 0.282303
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.352
ELB improved by 0.237411
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.147
ELB improved by 0.204544
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.968
ELB improved by 0.179595
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.807
ELB improved by 0.16012
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.663
ELB improved by 0.144576
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.531
ELB improved by 0.131931
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.409
ELB improved by 0.121471
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.297
ELB improved by 0.11268
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.192
ELB improved by 0.105178
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.093
ELB improved by 0.09868
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409
ELB improved by 0.0929678
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.912
ELB improved by 0.0878738
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.829
ELB improved by 0.0832687
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.75
ELB improved by 0.0790526
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.675
ELB improved by 0.0751492
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.603
ELB improved by 0.0715007
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.535
ELB improved by 0.0680642
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.47
ELB improved by 0.0648086
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.409
ELB improved by 0.0617124
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.35
ELB improved by 0.0587611
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.294
ELB improved by 0.0559459
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.241
ELB improved by 0.0532619
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.19
ELB improved by 0.0507067
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.142
ELB improved by 0.0482799
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.096
ELB improved by 0.0459815
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.052
ELB improved by 0.0438118
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.01
ELB improved by 0.041771
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.97
ELB improved by 0.0398586
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.932
ELB improved by 0.0380735
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.896
ELB improved by 0.0364141
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.861
ELB improved by 0.0348779
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.827
ELB improved by 0.0334621
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.795
ELB improved by 0.0321636
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.764
ELB improved by 0.0309789
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.734
ELB improved by 0.0299048
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.705
ELB improved by 0.0289378
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.677
ELB improved by 0.0280751
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.65
ELB improved by 0.0273139
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.623
ELB improved by 0.0266518
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.597
ELB improved by 0.0260866
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.572
ELB improved by 0.025616
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.546
ELB improved by 0.0252374
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.521
ELB improved by 0.024947
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.497
ELB improved by 0.0247394
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.472
ELB improved by 0.0246065
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.448
ELB improved by 0.0245374
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.423
ELB improved by 0.0245176
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.398
ELB improved by 0.0245303
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.374
ELB improved by 0.0245585
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.349
ELB improved by 0.0245872
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.325
ELB improved by 0.0246077
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.3
ELB improved by 0.0246192
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.275
ELB improved by 0.02463
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.251
ELB improved by 0.0246548
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.226
ELB improved by 0.0247119
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.201
ELB improved by 0.0248183
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.176
ELB improved by 0.0249872
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.151
ELB improved by 0.0252263
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.126
ELB improved by 0.0255383
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.1
ELB improved by 0.0259219
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.073
ELB improved by 0.0263728
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.046
ELB improved by 0.0268857
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.019
ELB improved by 0.0274544
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.991
ELB improved by 0.0280723
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.962
ELB improved by 0.028733
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.933
ELB improved by 0.0294297
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.903
ELB improved by 0.0301553
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.872
ELB improved by 0.0309019
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.84
ELB improved by 0.0316613
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.808
ELB improved by 0.0324242
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.774
ELB improved by 0.0331803
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.74
ELB improved by 0.0339185
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.706
ELB improved by 0.0346268
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.671
ELB improved by 0.0352926
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.635
ELB improved by 0.0359027
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.598
ELB improved by 0.0364443
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.561
ELB improved by 0.0369046
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.524
ELB improved by 0.0372724
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.486
ELB improved by 0.037538
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.449
ELB improved by 0.0376947
iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.411
ELB improved by 0.0377392
iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.373
ELB improved by 0.0376729
iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.336
ELB improved by 0.0375025
iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.299
ELB improved by 0.0372415
iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.262
ELB improved by 0.0369115
iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.225
ELB improved by 0.0365438
iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.189
ELB improved by 0.036183
iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.153
ELB improved by 0.035891
iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.117
ELB improved by 0.0357568
iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.081
ELB improved by 0.0359123
iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.045
ELB improved by 0.0365647
iteration 113
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.007
ELB improved by 0.0380602
iteration 114
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.966
ELB improved by 0.0410202
iteration 115
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.919
ELB improved by 0.0466369
iteration 116
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.862
ELB improved by 0.0573331
iteration 117
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.784
ELB improved by 0.0781483
iteration 118
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.665
ELB improved by 0.118834
iteration 119
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.472
ELB improved by 0.192465
iteration 120
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.175
ELB improved by 0.297411
iteration 121
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.772
ELB improved by 0.402976
iteration 122
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.265
ELB improved by 0.507004
iteration 123
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.606
ELB improved by 0.659209
iteration 124
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.758
ELB improved by 0.847696
iteration 125
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.88
ELB improved by 0.877623
iteration 126
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.134
ELB improved by 0.746826
iteration 127
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.461
ELB improved by 0.672324
iteration 128
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.826
ELB improved by 0.634999
iteration 129
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.302
ELB improved by 0.52394
iteration 130
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.943
ELB improved by 0.358946
iteration 131
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.722
ELB improved by 0.220998
iteration 132
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.59
ELB improved by 0.132692
iteration 133
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.508
ELB improved by 0.0819779
iteration 134
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.454
ELB improved by 0.0535694
iteration 135
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.417
ELB improved by 0.0372932
iteration 136
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.389
ELB improved by 0.0275158
iteration 137
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.368
ELB improved by 0.0212986
iteration 138
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.351
ELB improved by 0.0171188
iteration 139
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.337
ELB improved by 0.0141685
iteration 140
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.325
ELB improved by 0.0120007
iteration 141
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.314
ELB improved by 0.0103548
iteration 142
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.305
ELB improved by 0.00907101
ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
>
> proc.time()
user system elapsed
1.967 0.182 2.137
graper.Rcheck/graper-Ex.timings
| name | user | system | elapsed | |
| coef.graper | 0.048 | 0.012 | 0.060 | |
| getPIPs | 0.046 | 0.009 | 0.055 | |
| graper | 0.081 | 0.011 | 0.093 | |
| makeExampleData | 0.010 | 0.000 | 0.011 | |
| makeExampleDataWithUnequalGroups | 0.010 | 0.004 | 0.013 | |
| plotELBO | 0.211 | 0.016 | 0.227 | |
| plotGroupPenalties | 0.692 | 0.012 | 0.704 | |
| plotPosterior | 0.465 | 0.004 | 0.469 | |
| predict.graper | 2.049 | 0.027 | 2.076 | |
| print.graper | 0.052 | 0.001 | 0.051 | |