Multiple platform build/check report for BioC 3.20 - CHECK results for graper on palomino8

Hostname	OS	Arch (*)	R version	Installed pkgs
nebbiolo2	Linux (Ubuntu 24.04.1 LTS)	x86_64	4.4.2 (2024-10-31) -- "Pile of Leaves"	4743
palomino8	Windows Server 2022 Datacenter	x64	4.4.2 (2024-10-31 ucrt) -- "Pile of Leaves"	4486
merida1	macOS 12.7.5 Monterey	x86_64	4.4.2 (2024-10-31) -- "Pile of Leaves"	4514
kjohnson1	macOS 13.6.6 Ventura	arm64	4.4.2 (2024-10-31) -- "Pile of Leaves"	4466
Click on any hostname to see more info about the system (e.g. compilers) () as reported by 'uname -p', except on Windows and Mac OS X*

CHECK results for graper on palomino8

To the developers/maintainers of the graper package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results

Summary

Package: graper

Version: 1.22.0

Command: F:\biocbuild\bbs-3.20-bioc\R\bin\R.exe CMD check --no-multiarch --install=check:graper.install-out.txt --library=F:\biocbuild\bbs-3.20-bioc\R\library --no-vignettes --timings graper_1.22.0.tar.gz

StartedAt: 2024-12-17 02:00:02 -0500 (Tue, 17 Dec 2024)

EndedAt: 2024-12-17 02:01:35 -0500 (Tue, 17 Dec 2024)

EllapsedTime: 92.3 seconds

RetCode: 0

Status: OK

CheckDir: graper.Rcheck

Warnings: 0

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   F:\biocbuild\bbs-3.20-bioc\R\bin\R.exe CMD check --no-multiarch --install=check:graper.install-out.txt --library=F:\biocbuild\bbs-3.20-bioc\R\library --no-vignettes --timings graper_1.22.0.tar.gz
###
##############################################################################
##############################################################################


* using log directory 'F:/biocbuild/bbs-3.20-bioc/meat/graper.Rcheck'
* using R version 4.4.2 (2024-10-31 ucrt)
* using platform: x86_64-w64-mingw32
* R was compiled by
    gcc.exe (GCC) 13.3.0
    GNU Fortran (GCC) 13.3.0
* running under: Windows Server 2022 x64 (build 20348)
* using session charset: UTF-8
* using option '--no-vignettes'
* checking for file 'graper/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'graper' version '1.22.0'
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'graper' can be installed ... OK
* used C++ compiler: 'G__~1.EXE (GCC) 13.3.0'
* checking C++ specification ... NOTE
  Specified C++11: please drop specification unless essential
* checking installed package size ... OK
* checking package directory ... OK
* checking 'build' directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... NOTE
Note: information on .o files for x64 is not available
File 'F:/biocbuild/bbs-3.20-bioc/R/library/graper/libs/x64/graper.dll':
  Found '_exit', possibly from '_exit' (C)
  Found 'abort', possibly from 'abort' (C), 'runtime' (Fortran)
  Found 'exit', possibly from 'exit' (C), 'stop' (Fortran)

Compiled code should not call entry points which might terminate R nor
write to stdout/stderr instead of to the console, nor use Fortran I/O
nor system RNGs nor [v]sprintf. The detected symbols are linked into
the code but might come from libraries and not actually be called.

See 'Writing portable packages' in the 'Writing R Extensions' manual.
* checking files in 'vignettes' ... OK
* checking examples ... OK
* checking for unstated dependencies in 'tests' ... OK
* checking tests ...
  Running 'testthat.R'
 OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE

Status: 3 NOTEs
See
  'F:/biocbuild/bbs-3.20-bioc/meat/graper.Rcheck/00check.log'
for details.

Installation output

graper.Rcheck/00install.out

##############################################################################
##############################################################################
###
### Running command:
###
###   F:\biocbuild\bbs-3.20-bioc\R\bin\R.exe CMD INSTALL graper
###
##############################################################################
##############################################################################


* installing to library 'F:/biocbuild/bbs-3.20-bioc/R/library'
* installing *source* package 'graper' ...
** using staged installation
** libs
using C++ compiler: 'G__~1.EXE (GCC) 13.3.0'
using C++11
g++  -std=gnu++11 -I"F:/biocbuild/bbs-3.20-bioc/R/include" -DNDEBUG  -I'F:/biocbuild/bbs-3.20-bioc/R/library/Rcpp/include' -I'F:/biocbuild/bbs-3.20-bioc/R/library/RcppArmadillo/include' -I'F:/biocbuild/bbs-3.20-bioc/R/library/BH/include'   -I"C:/rtools44/x86_64-w64-mingw32.static.posix/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c RcppExports.cpp -o RcppExports.o
g++  -std=gnu++11 -I"F:/biocbuild/bbs-3.20-bioc/R/include" -DNDEBUG  -I'F:/biocbuild/bbs-3.20-bioc/R/library/Rcpp/include' -I'F:/biocbuild/bbs-3.20-bioc/R/library/RcppArmadillo/include' -I'F:/biocbuild/bbs-3.20-bioc/R/library/BH/include'   -I"C:/rtools44/x86_64-w64-mingw32.static.posix/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c fit_graper.cpp -o fit_graper.o
In file included from F:/biocbuild/bbs-3.20-bioc/R/library/BH/include/boost/math/special_functions/detail/round_fwd.hpp:11,
                 from F:/biocbuild/bbs-3.20-bioc/R/library/BH/include/boost/math/special_functions/math_fwd.hpp:29,
                 from F:/biocbuild/bbs-3.20-bioc/R/library/BH/include/boost/math/special_functions/digamma.hpp:15,
                 from graper_linear_dense_ff.h:2,
                 from fit_graper.cpp:4:
F:/biocbuild/bbs-3.20-bioc/R/library/BH/include/boost/math/tools/config.hpp:23:6: warning: #warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" [-Wcpp]
   23 | #    warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)"
      |      ^~~~~~~
g++ -shared -s -static-libgcc -o graper.dll tmp.def RcppExports.o fit_graper.o -LF:/biocbuild/bbs-3.20-bioc/R/bin/x64 -lRlapack -LF:/biocbuild/bbs-3.20-bioc/R/bin/x64 -lRblas -lgfortran -lm -lquadmath -LC:/rtools44/x86_64-w64-mingw32.static.posix/lib/x64 -LC:/rtools44/x86_64-w64-mingw32.static.posix/lib -LF:/biocbuild/bbs-3.20-bioc/R/bin/x64 -lR
installing to F:/biocbuild/bbs-3.20-bioc/R/library/00LOCK-graper/00new/graper/libs/x64
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (graper)

Tests output

graper.Rcheck/tests/testthat.Rout


R version 4.4.2 (2024-10-31 ucrt) -- "Pile of Leaves"
Copyright (C) 2024 The R Foundation for Statistical Computing
Platform: x86_64-w64-mingw32/x64

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> library(testthat)
> library(graper)
> 
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-869.272
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-583.856
ELB improved by 285.417

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-524.054
ELB improved by 59.8018

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-485.087
ELB improved by 38.9663

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-466.886
ELB improved by 18.2013

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-458.429
ELB improved by 8.45691

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-452.728
ELB improved by 5.70072

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.783
ELB improved by 4.9455

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.285
ELB improved by 4.49801

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.365
ELB improved by 3.92036

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.214
ELB improved by 3.15031

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.894
ELB improved by 2.3198

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.285
ELB improved by 1.60929

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.181
ELB improved by 1.10427

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.398
ELB improved by 0.783194

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.811
ELB improved by 0.586631

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.347
ELB improved by 0.464424

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.961
ELB improved by 0.38524

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.63
ELB improved by 0.331585

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.336
ELB improved by 0.293964

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.069
ELB improved by 0.267143

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.821
ELB improved by 0.248113

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.586
ELB improved by 0.235006

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.359
ELB improved by 0.226488

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.138
ELB improved by 0.221402

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.919
ELB improved by 0.218628

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.702
ELB improved by 0.217106

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.486
ELB improved by 0.215961

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.271
ELB improved by 0.21457

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.059
ELB improved by 0.212577

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.849
ELB improved by 0.209981

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.642
ELB improved by 0.207205

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.437
ELB improved by 0.204783

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.235
ELB improved by 0.202343

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.038
ELB improved by 0.197044

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.854
ELB improved by 0.183361

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.696
ELB improved by 0.157777

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.571
ELB improved by 0.125003

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.477
ELB improved by 0.094684

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.404
ELB improved by 0.072393

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.346
ELB improved by 0.0578414

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.298
ELB improved by 0.0485202

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.256
ELB improved by 0.0422426

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.218
ELB improved by 0.0376702

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.184
ELB improved by 0.0340862

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.153
ELB improved by 0.0311205

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.124
ELB improved by 0.0285782

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.098
ELB improved by 0.0263505

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.074
ELB improved by 0.024372

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.051
ELB improved by 0.0225997

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.03
ELB improved by 0.0210029

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.01
ELB improved by 0.0195585

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.992
ELB improved by 0.018248

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.975
ELB improved by 0.017056

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.959
ELB improved by 0.0159698

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.944
ELB improved by 0.0149782

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.93
ELB improved by 0.0140715

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.917
ELB improved by 0.0132414

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.904
ELB improved by 0.0124803

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.893
ELB improved by 0.0117819

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.881
ELB improved by 0.0111401

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.871
ELB improved by 0.0105499

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.861
ELB improved by 0.0100066

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.851
ELB improved by 0.00950609

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-857.769
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-577.618
ELB improved by 280.151

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-517.115
ELB improved by 60.5023

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-475.36
ELB improved by 41.755

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-456.909
ELB improved by 18.4509

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.321
ELB improved by 6.58858

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.016
ELB improved by 3.30485

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.695
ELB improved by 2.32075

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.723
ELB improved by 1.97231

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.876
ELB improved by 1.8467

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.076
ELB improved by 1.80002

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.298
ELB improved by 1.77857

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.536
ELB improved by 1.76124

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.796
ELB improved by 1.74014

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.085
ELB improved by 1.71165

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.413
ELB improved by 1.67172

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.799
ELB improved by 1.61348

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.272
ELB improved by 1.52729

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.867
ELB improved by 1.40535

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.618
ELB improved by 1.24909

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.546
ELB improved by 1.07178

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.652
ELB improved by 0.894187

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.914
ELB improved by 0.738106

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.294
ELB improved by 0.619945

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.749
ELB improved by 0.54501

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.244
ELB improved by 0.505139

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.761
ELB improved by 0.482713

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.299
ELB improved by 0.462078

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.863
ELB improved by 0.435578

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.466
ELB improved by 0.396943

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.125
ELB improved by 0.341056

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.851
ELB improved by 0.273902

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.642
ELB improved by 0.209683

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.484
ELB improved by 0.157844

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.364
ELB improved by 0.119818

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.271
ELB improved by 0.0931056

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.196
ELB improved by 0.074551

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.135
ELB improved by 0.0615556

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.082
ELB improved by 0.0522632

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.037
ELB improved by 0.0454286

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.997
ELB improved by 0.0402411

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.961
ELB improved by 0.0361786

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.928
ELB improved by 0.0329053

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.898
ELB improved by 0.0302032

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.87
ELB improved by 0.0279291

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.844
ELB improved by 0.0259863

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.819
ELB improved by 0.0243082

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.796
ELB improved by 0.0228473

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.775
ELB improved by 0.021569

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.754
ELB improved by 0.0204466

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.735
ELB improved by 0.0194597

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.716
ELB improved by 0.018592

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.699
ELB improved by 0.0178299

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.681
ELB improved by 0.0171626

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.665
ELB improved by 0.0165809

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.649
ELB improved by 0.0160768

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.633
ELB improved by 0.015644

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.618
ELB improved by 0.0152766

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.603
ELB improved by 0.0149702

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.588
ELB improved by 0.0147204

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.574
ELB improved by 0.0145241

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.559
ELB improved by 0.0143783

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.545
ELB improved by 0.0142808

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.531
ELB improved by 0.0142297

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.516
ELB improved by 0.0142236

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.502
ELB improved by 0.0142615

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.488
ELB improved by 0.0143428

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.473
ELB improved by 0.0144674

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.459
ELB improved by 0.0146355

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.444
ELB improved by 0.0148477

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.429
ELB improved by 0.0151052

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.413
ELB improved by 0.0154094

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.398
ELB improved by 0.0157625

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.381
ELB improved by 0.0161672

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.365
ELB improved by 0.0166271

iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.348
ELB improved by 0.0171463

iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.33
ELB improved by 0.0177303

iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.312
ELB improved by 0.0183856

iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.292
ELB improved by 0.0191204

iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.273
ELB improved by 0.0199448

iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.252
ELB improved by 0.0208716

iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.23
ELB improved by 0.0219169

iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.207
ELB improved by 0.0231011

iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.182
ELB improved by 0.0244504

iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.156
ELB improved by 0.0259989

iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.128
ELB improved by 0.0277911

iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.099
ELB improved by 0.0298858

iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.066
ELB improved by 0.0323609

iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.031
ELB improved by 0.0353198

iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.992
ELB improved by 0.0388987

iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.949
ELB improved by 0.0432734

iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.9
ELB improved by 0.0486608

iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.845
ELB improved by 0.0553037

iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.781
ELB improved by 0.0634223

iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.708
ELB improved by 0.0731052

iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.624
ELB improved by 0.0841393

iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.528
ELB improved by 0.0958459

iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.421
ELB improved by 0.107098

iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.304
ELB improved by 0.116655

iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.181
ELB improved by 0.123672

iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.053
ELB improved by 0.127953

iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.923
ELB improved by 0.12981

iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.793
ELB improved by 0.129753

iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.665
ELB improved by 0.128276

iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.539
ELB improved by 0.125788

iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.417
ELB improved by 0.122606

iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.298
ELB improved by 0.118975

iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.182
ELB improved by 0.115093

iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.071
ELB improved by 0.11113

iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.964
ELB improved by 0.10724

iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.861
ELB improved by 0.103572

iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.76
ELB improved by 0.100265

iteration 113
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.663
ELB improved by 0.0974518

iteration 114
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.568
ELB improved by 0.0952466

iteration 115
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.474
ELB improved by 0.0937394

iteration 116
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.381
ELB improved by 0.0929819

iteration 117
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.288
ELB improved by 0.0929754

iteration 118
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.194
ELB improved by 0.0936668

iteration 119
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.099
ELB improved by 0.0949566

iteration 120
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.003
ELB improved by 0.0967208

iteration 121
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.904
ELB improved by 0.0988351

iteration 122
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.803
ELB improved by 0.101174

iteration 123
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.699
ELB improved by 0.103554

iteration 124
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.593
ELB improved by 0.10561

iteration 125
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.487
ELB improved by 0.106655

iteration 126
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.381
ELB improved by 0.105699

iteration 127
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.279
ELB improved by 0.101791

iteration 128
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.185
ELB improved by 0.0946289

iteration 129
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.1
ELB improved by 0.0849023

iteration 130
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.026
ELB improved by 0.073979

iteration 131
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.963
ELB improved by 0.0632047

iteration 132
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.909
ELB improved by 0.0534319

iteration 133
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.864
ELB improved by 0.0449862

iteration 134
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.826
ELB improved by 0.0378603

iteration 135
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.794
ELB improved by 0.0319057

iteration 136
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.767
ELB improved by 0.0269428

iteration 137
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.745
ELB improved by 0.0228056

iteration 138
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.725
ELB improved by 0.0193535

iteration 139
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.709
ELB improved by 0.0164702

iteration 140
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.695
ELB improved by 0.01406

iteration 141
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.683
ELB improved by 0.0120439

iteration 142
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.672
ELB improved by 0.0103563

iteration 143
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.663
ELB improved by 0.00894251

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-843.659
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-569.028
ELB improved by 274.631

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-506.448
ELB improved by 62.5797

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-462.421
ELB improved by 44.027

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.803
ELB improved by 20.618

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.969
ELB improved by 8.83346

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.237
ELB improved by 4.73242

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.872
ELB improved by 3.36498

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.992
ELB improved by 2.87987

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.26
ELB improved by 2.73237

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.512
ELB improved by 2.74825

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.664
ELB improved by 2.84706

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.692
ELB improved by 2.97258

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.636
ELB improved by 3.0555

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.619
ELB improved by 3.01731

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.793
ELB improved by 2.82602

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.272
ELB improved by 2.52113

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.15
ELB improved by 2.12185

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.504
ELB improved by 1.64652

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.289
ELB improved by 1.21444

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.396
ELB improved by 0.892702

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.73
ELB improved by 0.666471

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.216
ELB improved by 0.514018

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.804
ELB improved by 0.412

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.464
ELB improved by 0.340275

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.174
ELB improved by 0.289891

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.917
ELB improved by 0.256979

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.679
ELB improved by 0.237375

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.453
ELB improved by 0.226724

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.231
ELB improved by 0.221598

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.011
ELB improved by 0.219717

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.792
ELB improved by 0.219634

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.571
ELB improved by 0.220404

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.35
ELB improved by 0.221392

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.128
ELB improved by 0.222191

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.905
ELB improved by 0.222615

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.682
ELB improved by 0.222715

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.46
ELB improved by 0.222808

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.236
ELB improved by 0.223492

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.011
ELB improved by 0.225635

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.78
ELB improved by 0.230234

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.542
ELB improved by 0.237924

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.295
ELB improved by 0.247783

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.039
ELB improved by 0.255861

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.783
ELB improved by 0.256177

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.536
ELB improved by 0.246097

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.307
ELB improved by 0.229365

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.096
ELB improved by 0.211426

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.901
ELB improved by 0.19498

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.72
ELB improved by 0.180348

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.553
ELB improved by 0.167077

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.399
ELB improved by 0.154698

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.256
ELB improved by 0.142908

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.124
ELB improved by 0.131556

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.003
ELB improved by 0.120604

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.893
ELB improved by 0.110082

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.793
ELB improved by 0.100053

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.703
ELB improved by 0.0905849

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.621
ELB improved by 0.0817405

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.547
ELB improved by 0.073568

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.481
ELB improved by 0.0661003

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.422
ELB improved by 0.0593548

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.369
ELB improved by 0.0533361

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.321
ELB improved by 0.0480375

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.277
ELB improved by 0.0434427

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.238
ELB improved by 0.0395275

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.201
ELB improved by 0.0362588

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.168
ELB improved by 0.0335949

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.136
ELB improved by 0.0314819

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.106
ELB improved by 0.0298513

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.078
ELB improved by 0.0286165

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.05
ELB improved by 0.0276716

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.023
ELB improved by 0.0268953

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.997
ELB improved by 0.02616

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.972
ELB improved by 0.0253484

iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.947
ELB improved by 0.0243702

iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.924
ELB improved by 0.0231772

iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.902
ELB improved by 0.0217678

iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.882
ELB improved by 0.0201825

iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.864
ELB improved by 0.018489

iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.847
ELB improved by 0.016766

iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.832
ELB improved by 0.0150862

iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.818
ELB improved by 0.0135063

iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.806
ELB improved by 0.0120629

iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.796
ELB improved by 0.0107732

iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.786
ELB improved by 0.00963916

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-905.57
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-575.631
ELB improved by 329.939

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-510.409
ELB improved by 65.2228

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-477.009
ELB improved by 33.3995

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-463.078
ELB improved by 13.9313

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-455.488
ELB improved by 7.58966

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.218
ELB improved by 6.27038

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.69
ELB improved by 6.52778

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.447
ELB improved by 7.24284

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.758
ELB improved by 7.68966

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.617
ELB improved by 7.14083

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.981
ELB improved by 5.63585

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.839
ELB improved by 4.14232

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.554
ELB improved by 3.28407

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.869
ELB improved by 2.68563

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.96
ELB improved by 1.90854

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.719
ELB improved by 1.24138

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.893
ELB improved by 0.826186

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.311
ELB improved by 0.58182

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.878
ELB improved by 0.43244

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.543
ELB improved by 0.335219

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.275
ELB improved by 0.267988

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.056
ELB improved by 0.219176

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.874
ELB improved by 0.182415

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.72
ELB improved by 0.15396

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.588
ELB improved by 0.131459

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.475
ELB improved by 0.113358

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.376
ELB improved by 0.0985866

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.29
ELB improved by 0.0863837

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.214
ELB improved by 0.0761941

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.146
ELB improved by 0.0676053

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.086
ELB improved by 0.0603049

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.032
ELB improved by 0.054053

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.983
ELB improved by 0.0486629

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.939
ELB improved by 0.0439875

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.899
ELB improved by 0.0399097

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.863
ELB improved by 0.0363352

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.83
ELB improved by 0.0331876

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.799
ELB improved by 0.0304042

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.771
ELB improved by 0.0279334

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.746
ELB improved by 0.0257324

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.722
ELB improved by 0.0237651

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.7
ELB improved by 0.0220014

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.679
ELB improved by 0.0204158

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.66
ELB improved by 0.0189865

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.643
ELB improved by 0.0176948

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.626
ELB improved by 0.0165248

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.611
ELB improved by 0.0154626

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.596
ELB improved by 0.0144964

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.583
ELB improved by 0.0136157

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.57
ELB improved by 0.0128113

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.558
ELB improved by 0.0120754

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.546
ELB improved by 0.011401

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.536
ELB improved by 0.0107818

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.525
ELB improved by 0.0102125

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.516
ELB improved by 0.00968809

ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
> 
> proc.time()
   user  system elapsed 
   2.23    0.39    3.20

Example timings

graper.Rcheck/graper-Ex.timings

name	user	system	elapsed
coef.graper	0.06	0.01	0.08
getPIPs	0.07	0.00	0.08
graper	0.09	0.00	0.10
makeExampleData	0.02	0.00	0.01
makeExampleDataWithUnequalGroups	0.01	0.00	0.02
plotELBO	0.25	0.02	0.27
plotGroupPenalties	1.18	0.04	1.21
plotPosterior	0.68	0.02	0.71
predict.graper	1.94	0.05	2.12
print.graper	0.06	0.00	0.06