Multiple platform build/check report for BioC 3.22 - CHECK results for graper on lconway

Hostname	OS	Arch (*)	R version	Installed pkgs
nebbiolo2	Linux (Ubuntu 24.04.3 LTS)	x86_64	4.5.1 Patched (2025-08-23 r88802) -- "Great Square Root"	4902
lconway	macOS 12.7.6 Monterey	x86_64	4.5.1 Patched (2025-09-10 r88807) -- "Great Square Root"	4692
kjohnson3	macOS 13.7.7 Ventura	arm64	4.5.1 Patched (2025-09-10 r88807) -- "Great Square Root"	4638
Click on any hostname to see more info about the system (e.g. compilers) () as reported by 'uname -p', except on Windows and Mac OS X*

CHECK results for graper on lconway

To the developers/maintainers of the graper package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results

Summary

Package: graper

Version: 1.26.0

Command: /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:graper.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings graper_1.26.0.tar.gz

StartedAt: 2025-11-03 21:41:03 -0500 (Mon, 03 Nov 2025)

EndedAt: 2025-11-03 21:42:22 -0500 (Mon, 03 Nov 2025)

EllapsedTime: 78.3 seconds

RetCode: 0

Status: OK

CheckDir: graper.Rcheck

Warnings: 0

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:graper.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings graper_1.26.0.tar.gz
###
##############################################################################
##############################################################################


* using log directory ‘/Users/biocbuild/bbs-3.22-bioc/meat/graper.Rcheck’
* using R version 4.5.1 Patched (2025-09-10 r88807)
* using platform: x86_64-apple-darwin20
* R was compiled by
    Apple clang version 14.0.0 (clang-1400.0.29.202)
    GNU Fortran (GCC) 14.2.0
* running under: macOS Monterey 12.7.6
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.26.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* used C++ compiler: ‘Apple clang version 14.0.0 (clang-1400.0.29.202)’
* used SDK: ‘MacOSX11.3.1.sdk’
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... NOTE
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
  Running ‘testthat.R’
 OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE

Status: 2 NOTEs
See
  ‘/Users/biocbuild/bbs-3.22-bioc/meat/graper.Rcheck/00check.log’
for details.

Installation output

graper.Rcheck/00install.out

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL graper
###
##############################################################################
##############################################################################


* installing to library ‘/Library/Frameworks/R.framework/Versions/4.5-x86_64/Resources/library’
* installing *source* package ‘graper’ ...
** this is package ‘graper’ version ‘1.26.0’
** using staged installation
** libs
using C++ compiler: ‘Apple clang version 14.0.0 (clang-1400.0.29.202)’
using SDK: ‘MacOSX11.3.1.sdk’
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Library/Frameworks/R.framework/Versions/4.5-x86_64/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.5-x86_64/Resources/library/RcppArmadillo/include' -I'/Library/Frameworks/R.framework/Versions/4.5-x86_64/Resources/library/BH/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c RcppExports.cpp -o RcppExports.o
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Library/Frameworks/R.framework/Versions/4.5-x86_64/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.5-x86_64/Resources/library/RcppArmadillo/include' -I'/Library/Frameworks/R.framework/Versions/4.5-x86_64/Resources/library/BH/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c fit_graper.cpp -o fit_graper.o
clang++ -arch x86_64 -std=gnu++17 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/x86_64/lib -o graper.so RcppExports.o fit_graper.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/opt/gfortran/lib/gcc/x86_64-apple-darwin20.0/14.2.0 -L/opt/gfortran/lib -lemutls_w -lheapt_w -lgfortran -lquadmath -F/Library/Frameworks/R.framework/.. -framework R
installing to /Library/Frameworks/R.framework/Versions/4.5-x86_64/Resources/library/00LOCK-graper/00new/graper/libs
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (graper)

Tests output

graper.Rcheck/tests/testthat.Rout


R version 4.5.1 Patched (2025-09-10 r88807) -- "Great Square Root"
Copyright (C) 2025 The R Foundation for Statistical Computing
Platform: x86_64-apple-darwin20

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> library(testthat)
> library(graper)
> 
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-860.917
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-565.779
ELB improved by 295.138

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-510.337
ELB improved by 55.4421

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-476.748
ELB improved by 33.5887

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-462.179
ELB improved by 14.5689

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-455.997
ELB improved by 6.18222

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-452.244
ELB improved by 3.75294

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.451
ELB improved by 2.79328

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.041
ELB improved by 2.4093

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.766
ELB improved by 2.27489

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.556
ELB improved by 2.21026

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.441
ELB improved by 2.11529

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.511
ELB improved by 1.9297

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.867
ELB improved by 1.64408

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.561
ELB improved by 1.30622

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.574
ELB improved by 0.986813

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.841
ELB improved by 0.733161

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.286
ELB improved by 0.554585

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.85
ELB improved by 0.436126

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.494
ELB improved by 0.355766

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.199
ELB improved by 0.295435

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.953
ELB improved by 0.245882

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.748
ELB improved by 0.205074

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.575
ELB improved by 0.173116

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.426
ELB improved by 0.149183

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.294
ELB improved by 0.131542

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.176
ELB improved by 0.118438

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.067
ELB improved by 0.108528

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.966
ELB improved by 0.100906

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.871
ELB improved by 0.0949843

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.781
ELB improved by 0.0903837

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.694
ELB improved by 0.086856

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.61
ELB improved by 0.0842357

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.527
ELB improved by 0.0824131

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.446
ELB improved by 0.0813183

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.365
ELB improved by 0.0809128

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.284
ELB improved by 0.0811864

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.202
ELB improved by 0.0821562

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.118
ELB improved by 0.0838705

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.032
ELB improved by 0.0864134

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.942
ELB improved by 0.0899144

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.847
ELB improved by 0.0945606

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.746
ELB improved by 0.100613

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.638
ELB improved by 0.108423

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.52
ELB improved by 0.118458

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.388
ELB improved by 0.131311

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.241
ELB improved by 0.147725

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.072
ELB improved by 0.168617

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.877
ELB improved by 0.195191

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.648
ELB improved by 0.22922

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.374
ELB improved by 0.273697

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.04
ELB improved by 0.334043

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.62
ELB improved by 0.419909

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.074
ELB improved by 0.546105

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.349
ELB improved by 0.724803

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.411
ELB improved by 0.93838

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.275
ELB improved by 1.13526

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.981
ELB improved by 1.29464

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.557
ELB improved by 1.4234

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.052
ELB improved by 1.50516

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.546
ELB improved by 1.50609

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.146
ELB improved by 1.40046

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.95
ELB improved by 1.19561

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.013
ELB improved by 0.936686

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.333
ELB improved by 0.679894

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.871
ELB improved by 0.462855

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.57
ELB improved by 0.300568

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.377
ELB improved by 0.192696

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.25
ELB improved by 0.127749

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.159
ELB improved by 0.0909629

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.088
ELB improved by 0.070953

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.027
ELB improved by 0.0609892

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.969
ELB improved by 0.0577211

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.909
ELB improved by 0.0596777

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.843
ELB improved by 0.0657652

iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.77
ELB improved by 0.0733149

iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.693
ELB improved by 0.076877

iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.622
ELB improved by 0.0716172

iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.562
ELB improved by 0.0593639

iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.516
ELB improved by 0.0467146

iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.478
ELB improved by 0.0378516

iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.445
ELB improved by 0.0331248

iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.413
ELB improved by 0.0316158

iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.38
ELB improved by 0.0327387

iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.344
ELB improved by 0.0364703

iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.301
ELB improved by 0.0428807

iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.25
ELB improved by 0.050846

iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.194
ELB improved by 0.0561257

iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.141
ELB improved by 0.0524446

iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.102
ELB improved by 0.0392516

iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.078
ELB improved by 0.0246097

iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.063
ELB improved by 0.0149431

iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.053
ELB improved by 0.0101029

iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.045
ELB improved by 0.00783726

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-821.954
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-564.377
ELB improved by 257.577

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-504.504
ELB improved by 59.8731

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-467.561
ELB improved by 36.9427

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.241
ELB improved by 17.32

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.655
ELB improved by 8.58556

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.744
ELB improved by 5.9115

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.268
ELB improved by 5.4758

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.659
ELB improved by 5.60903

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.231
ELB improved by 5.42775

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.677
ELB improved by 4.55423

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.487
ELB improved by 3.18987

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.565
ELB improved by 1.92185

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.447
ELB improved by 1.11884

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.751
ELB improved by 0.695561

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.278
ELB improved by 0.47298

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.931
ELB improved by 0.346735

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.662
ELB improved by 0.269184

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.444
ELB improved by 0.21832

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.261
ELB improved by 0.183121

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.103
ELB improved by 0.157647

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.964
ELB improved by 0.138502

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.841
ELB improved by 0.123653

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.729
ELB improved by 0.111828

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.627
ELB improved by 0.102205

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.533
ELB improved by 0.0942317

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.445
ELB improved by 0.0875242

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.363
ELB improved by 0.0818091

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.286
ELB improved by 0.0768848

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.214
ELB improved by 0.072599

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.145
ELB improved by 0.0688338

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.079
ELB improved by 0.0654962

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.017
ELB improved by 0.0625112

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.957
ELB improved by 0.0598178

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.9
ELB improved by 0.0573654

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.845
ELB improved by 0.0551119

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.792
ELB improved by 0.0530217

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.741
ELB improved by 0.0510647

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.691
ELB improved by 0.0492155

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.644
ELB improved by 0.0474527

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.598
ELB improved by 0.0457593

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.554
ELB improved by 0.0441219

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.511
ELB improved by 0.0425311

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.47
ELB improved by 0.0409812

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.431
ELB improved by 0.0394698

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.393
ELB improved by 0.0379973

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.356
ELB improved by 0.0365661

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.321
ELB improved by 0.0351792

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.287
ELB improved by 0.0338401

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.255
ELB improved by 0.0325514

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.224
ELB improved by 0.0313149

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.193
ELB improved by 0.0301313

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.164
ELB improved by 0.0290001

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.137
ELB improved by 0.02792

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.11
ELB improved by 0.0268895

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.084
ELB improved by 0.0259064

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.059
ELB improved by 0.0249691

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.035
ELB improved by 0.0240761

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.011
ELB improved by 0.0232263

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.989
ELB improved by 0.0224198

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.967
ELB improved by 0.0216573

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.946
ELB improved by 0.0209405

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.926
ELB improved by 0.0202724

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.906
ELB improved by 0.0196574

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.887
ELB improved by 0.0191017

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.869
ELB improved by 0.0186139

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.851
ELB improved by 0.0182059

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.833
ELB improved by 0.0178945

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.815
ELB improved by 0.0177038

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.797
ELB improved by 0.0176693

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.779
ELB improved by 0.0178438

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.761
ELB improved by 0.0183079

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.742
ELB improved by 0.0191855

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.721
ELB improved by 0.0206667

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.698
ELB improved by 0.0230361

iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.672
ELB improved by 0.0266878

iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.64
ELB improved by 0.032062

iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.6
ELB improved by 0.0393511

iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.552
ELB improved by 0.04781

iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.497
ELB improved by 0.0550347

iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.44
ELB improved by 0.0577285

iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.385
ELB improved by 0.0545928

iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.337
ELB improved by 0.047753

iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.297
ELB improved by 0.0403102

iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.263
ELB improved by 0.033929

iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.234
ELB improved by 0.028895

iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.209
ELB improved by 0.0249781

iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.187
ELB improved by 0.0218967

iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.168
ELB improved by 0.0194341

iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.15
ELB improved by 0.0174373

iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.135
ELB improved by 0.0157976

iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.12
ELB improved by 0.0144355

iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.107
ELB improved by 0.0132917

iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.095
ELB improved by 0.0123204

iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.083
ELB improved by 0.0114867

iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.072
ELB improved by 0.0107632

iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.062
ELB improved by 0.010129

iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.053
ELB improved by 0.00956769

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-841.598
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-596.258
ELB improved by 245.339

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-536.721
ELB improved by 59.5373

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-487.06
ELB improved by 49.6614

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-460.454
ELB improved by 26.6057

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.224
ELB improved by 11.23

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.114
ELB improved by 6.11055

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.602
ELB improved by 4.5115

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.575
ELB improved by 4.02749

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.679
ELB improved by 3.89588

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.956
ELB improved by 3.7226

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.642
ELB improved by 3.31425

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.951
ELB improved by 2.69127

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.925
ELB improved by 2.02566

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.492
ELB improved by 1.43318

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.55
ELB improved by 0.942009

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.947
ELB improved by 0.603158

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.54
ELB improved by 0.406857

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.244
ELB improved by 0.295482

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.015
ELB improved by 0.228733

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.829
ELB improved by 0.18657

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.67
ELB improved by 0.159007

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.529
ELB improved by 0.140542

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.401
ELB improved by 0.127884

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.282
ELB improved by 0.118999

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.17
ELB improved by 0.112612

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.062
ELB improved by 0.107915

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.958
ELB improved by 0.104381

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.856
ELB improved by 0.101655

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.756
ELB improved by 0.099486

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.659
ELB improved by 0.0976888

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.563
ELB improved by 0.0961231

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.468
ELB improved by 0.0946805

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.375
ELB improved by 0.0932778

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.283
ELB improved by 0.0918533

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.192
ELB improved by 0.0903635

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.104
ELB improved by 0.0887822

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.017
ELB improved by 0.0870983

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.931
ELB improved by 0.0853139

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.848
ELB improved by 0.0834423

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.766
ELB improved by 0.0815055

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.687
ELB improved by 0.0795314

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.609
ELB improved by 0.077552

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.534
ELB improved by 0.0756004

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.46
ELB improved by 0.0737092

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.388
ELB improved by 0.0719096

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.318
ELB improved by 0.0702301

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.249
ELB improved by 0.0686962

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.182
ELB improved by 0.0673309

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.116
ELB improved by 0.0661548

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.05
ELB improved by 0.065187

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.986
ELB improved by 0.0644459

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.922
ELB improved by 0.0639505

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.858
ELB improved by 0.0637213

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.794
ELB improved by 0.0637822

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.73
ELB improved by 0.0641619

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.665
ELB improved by 0.0648961

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.599
ELB improved by 0.0660301

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.532
ELB improved by 0.0676226

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.462
ELB improved by 0.06975

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.389
ELB improved by 0.0725138

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.313
ELB improved by 0.0760495

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.233
ELB improved by 0.0805411

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.147
ELB improved by 0.0862429

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.053
ELB improved by 0.0935132

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.95
ELB improved by 0.102871

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.835
ELB improved by 0.115091

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.704
ELB improved by 0.131358

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.55
ELB improved by 0.153468

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.366
ELB improved by 0.183861

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.142
ELB improved by 0.224502

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.869
ELB improved by 0.272664

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.554
ELB improved by 0.315591

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.216
ELB improved by 0.337693

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.878
ELB improved by 0.338025

iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.552
ELB improved by 0.326286

iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.243
ELB improved by 0.309067

iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.953
ELB improved by 0.289246

iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.684
ELB improved by 0.268936

iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.434
ELB improved by 0.250194

iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.2
ELB improved by 0.234669

iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.977
ELB improved by 0.222892

iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.763
ELB improved by 0.213592

iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.559
ELB improved by 0.203909

iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.369
ELB improved by 0.19066

iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.197
ELB improved by 0.171419

iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.051
ELB improved by 0.145849

iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.934
ELB improved by 0.117603

iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.841
ELB improved by 0.0923142

iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.768
ELB improved by 0.072913

iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.709
ELB improved by 0.0590669

iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.66
ELB improved by 0.0493325

iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.618
ELB improved by 0.042356

iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.581
ELB improved by 0.0370813

iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.548
ELB improved by 0.0327327

iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.519
ELB improved by 0.0288025

iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.494
ELB improved by 0.0250392

iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.473
ELB improved by 0.0214044

iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.455
ELB improved by 0.0179898

iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.44
ELB improved by 0.014921

iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.427
ELB improved by 0.0122875

iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.417
ELB improved by 0.0101153

iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.409
ELB improved by 0.00837633

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-843.282
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-581.749
ELB improved by 261.533

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-520.403
ELB improved by 61.3461

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-478.341
ELB improved by 42.0623

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-457.037
ELB improved by 21.3032

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.691
ELB improved by 10.3465

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.475
ELB improved by 6.21645

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.444
ELB improved by 5.03035

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.545
ELB improved by 4.89891

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.784
ELB improved by 4.76098

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.625
ELB improved by 4.15879

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.464
ELB improved by 3.16108

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.28
ELB improved by 2.18467

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.761
ELB improved by 1.51871

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.607
ELB improved by 1.15426

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.675
ELB improved by 0.93179

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.944
ELB improved by 0.731306

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.391
ELB improved by 0.552595

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.969
ELB improved by 0.42248

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.631
ELB improved by 0.337419

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.35
ELB improved by 0.281189

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.108
ELB improved by 0.241654

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.896
ELB improved by 0.212372

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.706
ELB improved by 0.190002

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.533
ELB improved by 0.172576

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.375
ELB improved by 0.158801

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.227
ELB improved by 0.147793

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.088
ELB improved by 0.138939

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.956
ELB improved by 0.131811

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.83
ELB improved by 0.126101

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.708
ELB improved by 0.121585

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.59
ELB improved by 0.118094

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.475
ELB improved by 0.115495

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.361
ELB improved by 0.113678

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.249
ELB improved by 0.112546

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.137
ELB improved by 0.112017

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.024
ELB improved by 0.112024

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.912
ELB improved by 0.112534

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.798
ELB improved by 0.113559

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.683
ELB improved by 0.115172

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.566
ELB improved by 0.117516

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.445
ELB improved by 0.120806

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.32
ELB improved by 0.125337

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.188
ELB improved by 0.131495

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.048
ELB improved by 0.139782

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.897
ELB improved by 0.150842

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.732
ELB improved by 0.165461

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.548
ELB improved by 0.184483

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.339
ELB improved by 0.208518

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.102
ELB improved by 0.237382

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.832
ELB improved by 0.269501

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.53
ELB improved by 0.302009

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.198
ELB improved by 0.331831

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.842
ELB improved by 0.356582

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.467
ELB improved by 0.374249

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.085
ELB improved by 0.38262

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.705
ELB improved by 0.379594

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.341
ELB improved by 0.364159

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.004
ELB improved by 0.337262

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.702
ELB improved by 0.301956

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.439
ELB improved by 0.262637

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.215
ELB improved by 0.223752

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.027
ELB improved by 0.188665

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.868
ELB improved by 0.159192

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.732
ELB improved by 0.135771

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.614
ELB improved by 0.117916

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.509
ELB improved by 0.104673

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.414
ELB improved by 0.0949461

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.327
ELB improved by 0.0877143

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.244
ELB improved by 0.0821618

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.167
ELB improved by 0.0777218

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.093
ELB improved by 0.0740562

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.022
ELB improved by 0.0710014

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.953
ELB improved by 0.0684969

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.887
ELB improved by 0.0665044

iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.822
ELB improved by 0.0649353

iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.758
ELB improved by 0.063626

iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.696
ELB improved by 0.0623933

iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.635
ELB improved by 0.061136

iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.575
ELB improved by 0.0598617

iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.516
ELB improved by 0.0585137

iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.46
ELB improved by 0.0566592

iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.406
ELB improved by 0.053418

iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.358
ELB improved by 0.0480789

iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.317
ELB improved by 0.0410804

iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.283
ELB improved by 0.0340438

iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.254
ELB improved by 0.0285112

iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.229
ELB improved by 0.0249596

iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.206
ELB improved by 0.0230195

iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.184
ELB improved by 0.0221193

iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.162
ELB improved by 0.0218267

iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.141
ELB improved by 0.0218872

iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.118
ELB improved by 0.0221666

iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.096
ELB improved by 0.0225949

iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.073
ELB improved by 0.0231345

iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.049
ELB improved by 0.0237637

iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.024
ELB improved by 0.0244689

iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.999
ELB improved by 0.0252412

iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.973
ELB improved by 0.026075

iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.946
ELB improved by 0.0269665

iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.918
ELB improved by 0.027914

iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.889
ELB improved by 0.028917

iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.859
ELB improved by 0.0299766

iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.828
ELB improved by 0.0310953

iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.796
ELB improved by 0.0322768

iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.762
ELB improved by 0.0335268

iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.728
ELB improved by 0.0348525

iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.691
ELB improved by 0.0362629

iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.654
ELB improved by 0.0377692

iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.614
ELB improved by 0.0393846

iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.573
ELB improved by 0.0411244

iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.53
ELB improved by 0.0430061

iteration 113
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.485
ELB improved by 0.0450493

iteration 114
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.438
ELB improved by 0.0472753

iteration 115
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.388
ELB improved by 0.0497069

iteration 116
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.336
ELB improved by 0.0523678

iteration 117
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.28
ELB improved by 0.0552823

iteration 118
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.222
ELB improved by 0.0584742

iteration 119
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.16
ELB improved by 0.0619659

iteration 120
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.094
ELB improved by 0.0657773

iteration 121
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.024
ELB improved by 0.0699242

iteration 122
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.95
ELB improved by 0.0744165

iteration 123
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.871
ELB improved by 0.0792559

iteration 124
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.786
ELB improved by 0.0844334

iteration 125
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.696
ELB improved by 0.0899261

iteration 126
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.6
ELB improved by 0.0956941

iteration 127
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.499
ELB improved by 0.101677

iteration 128
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.391
ELB improved by 0.107793

iteration 129
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.277
ELB improved by 0.113934

iteration 130
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.157
ELB improved by 0.119973

iteration 131
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.031
ELB improved by 0.125766

iteration 132
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.9
ELB improved by 0.131164

iteration 133
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.764
ELB improved by 0.136033

iteration 134
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.624
ELB improved by 0.14027

iteration 135
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.48
ELB improved by 0.143826

iteration 136
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.333
ELB improved by 0.146718

iteration 137
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.184
ELB improved by 0.149018

iteration 138
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.034
ELB improved by 0.150826

iteration 139
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.881
ELB improved by 0.152205

iteration 140
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.728
ELB improved by 0.153109

iteration 141
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.575
ELB improved by 0.153335

iteration 142
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.422
ELB improved by 0.152547

iteration 143
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.272
ELB improved by 0.150381

iteration 144
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.125
ELB improved by 0.146586

iteration 145
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.984
ELB improved by 0.141122

iteration 146
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.85
ELB improved by 0.134159

iteration 147
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.724
ELB improved by 0.12602

iteration 148
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.607
ELB improved by 0.117097

iteration 149
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.499
ELB improved by 0.107782

iteration 150
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.401
ELB improved by 0.0984231

iteration 151
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.311
ELB improved by 0.0892992

iteration 152
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.231
ELB improved by 0.0806124

iteration 153
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.158
ELB improved by 0.0724923

iteration 154
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.093
ELB improved by 0.065009

iteration 155
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.035
ELB improved by 0.0581862

iteration 156
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.983
ELB improved by 0.0520158

iteration 157
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.937
ELB improved by 0.0464686

iteration 158
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.895
ELB improved by 0.0415033

iteration 159
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.858
ELB improved by 0.0370726

iteration 160
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.825
ELB improved by 0.0331274

iteration 161
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.795
ELB improved by 0.0296191

iteration 162
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.769
ELB improved by 0.0265019

iteration 163
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.745
ELB improved by 0.0237331

iteration 164
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.724
ELB improved by 0.0212737

iteration 165
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.705
ELB improved by 0.0190884

iteration 166
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.688
ELB improved by 0.0171456

iteration 167
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.672
ELB improved by 0.0154172

iteration 168
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.658
ELB improved by 0.0138784

iteration 169
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.646
ELB improved by 0.0125071

iteration 170
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.635
ELB improved by 0.0112839

iteration 171
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.624
ELB improved by 0.0101916

iteration 172
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.615
ELB improved by 0.0092153

ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
> 
> proc.time()
   user  system elapsed 
  2.858   0.291   3.165

Example timings

graper.Rcheck/graper-Ex.timings

name	user	system	elapsed
coef.graper	0.050	0.017	0.069
getPIPs	0.048	0.015	0.064
graper	0.083	0.022	0.107
makeExampleData	0.025	0.003	0.028
makeExampleDataWithUnequalGroups	0.010	0.001	0.012
plotELBO	0.333	0.021	0.356
plotGroupPenalties	1.327	0.055	1.398
plotPosterior	0.763	0.023	0.792
predict.graper	1.838	0.079	1.924
print.graper	0.043	0.011	0.054