Vilhelm Suksi
| Snapshot Date: 2025-10-14 13:45 -0400 (Tue, 14 Oct 2025) |
| git_url: https://git.bioconductor.org/packages/notameStats |
| git_branch: devel |
| git_last_commit: 58d6492 |
| git_last_commit_date: 2025-10-03 03:03:56 -0400 (Fri, 03 Oct 2025) |
| Back to Multiple platform build/check report for BioC 3.22: simplified long |
|
This page was generated on 2025-10-15 12:05 -0400 (Wed, 15 Oct 2025).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 24.04.3 LTS) | x86_64 | 4.5.1 Patched (2025-08-23 r88802) -- "Great Square Root" | 4866 |
| lconway | macOS 12.7.6 Monterey | x86_64 | 4.5.1 Patched (2025-09-10 r88807) -- "Great Square Root" | 4653 |
| kjohnson3 | macOS 13.7.7 Ventura | arm64 | 4.5.1 Patched (2025-09-10 r88807) -- "Great Square Root" | 4598 |
| taishan | Linux (openEuler 24.03 LTS) | aarch64 | 4.5.0 (2025-04-11) -- "How About a Twenty-Six" | 4610 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 1464/2346 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| notameStats 0.99.1 (landing page) Vilhelm Suksi
| nebbiolo2 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | | ||||||||
| lconway | macOS 12.7.6 Monterey / x86_64 | OK | OK | OK | OK | | ||||||||
| kjohnson3 | macOS 13.7.7 Ventura / arm64 | OK | OK | OK | OK | | ||||||||
| taishan | Linux (openEuler 24.03 LTS) / aarch64 | OK | OK | OK | ||||||||||
|
To the developers/maintainers of the notameStats package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/notameStats.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: notameStats |
| Version: 0.99.1 |
| Command: /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:notameStats.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings notameStats_0.99.1.tar.gz |
| StartedAt: 2025-10-14 23:57:17 -0400 (Tue, 14 Oct 2025) |
| EndedAt: 2025-10-15 00:02:49 -0400 (Wed, 15 Oct 2025) |
| EllapsedTime: 331.8 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: notameStats.Rcheck |
| Warnings: 0 |
##############################################################################
##############################################################################
###
### Running command:
###
### /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:notameStats.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings notameStats_0.99.1.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/Users/biocbuild/bbs-3.22-bioc/meat/notameStats.Rcheck’
* using R version 4.5.1 Patched (2025-09-10 r88807)
* using platform: x86_64-apple-darwin20
* R was compiled by
Apple clang version 14.0.0 (clang-1400.0.29.202)
GNU Fortran (GCC) 14.2.0
* running under: macOS Monterey 12.7.6
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘notameStats/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘notameStats’ version ‘0.99.1’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘notameStats’ can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... NOTE
License stub is invalid DCF.
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
Examples with CPU (user + system) or elapsed time > 5s
user system elapsed
pls_da 19.366 2.376 22.003
muvr_analysis 16.743 0.522 17.409
perform_non_parametric 9.868 5.988 5.788
perform_auc 9.382 3.474 3.719
perform_lmer 9.372 3.187 3.891
perform_correlation_tests 6.748 3.958 4.317
pls 8.576 0.247 8.876
perform_logistic 3.923 2.047 1.753
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘testthat.R’
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE
Status: 1 NOTE
See
‘/Users/biocbuild/bbs-3.22-bioc/meat/notameStats.Rcheck/00check.log’
for details.
notameStats.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL notameStats ### ############################################################################## ############################################################################## * installing to library ‘/Library/Frameworks/R.framework/Versions/4.5-x86_64/Resources/library’ * installing *source* package ‘notameStats’ ... ** this is package ‘notameStats’ version ‘0.99.1’ ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (notameStats)
notameStats.Rcheck/tests/testthat.Rout
R version 4.5.1 Patched (2025-09-10 r88807) -- "Great Square Root"
Copyright (C) 2025 The R Foundation for Statistical Computing
Platform: x86_64-apple-darwin20
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(testthat)
> library(notameStats)
Loading required package: SummarizedExperiment
Loading required package: MatrixGenerics
Loading required package: matrixStats
Attaching package: 'MatrixGenerics'
The following objects are masked from 'package:matrixStats':
colAlls, colAnyNAs, colAnys, colAvgsPerRowSet, colCollapse,
colCounts, colCummaxs, colCummins, colCumprods, colCumsums,
colDiffs, colIQRDiffs, colIQRs, colLogSumExps, colMadDiffs,
colMads, colMaxs, colMeans2, colMedians, colMins, colOrderStats,
colProds, colQuantiles, colRanges, colRanks, colSdDiffs, colSds,
colSums2, colTabulates, colVarDiffs, colVars, colWeightedMads,
colWeightedMeans, colWeightedMedians, colWeightedSds,
colWeightedVars, rowAlls, rowAnyNAs, rowAnys, rowAvgsPerColSet,
rowCollapse, rowCounts, rowCummaxs, rowCummins, rowCumprods,
rowCumsums, rowDiffs, rowIQRDiffs, rowIQRs, rowLogSumExps,
rowMadDiffs, rowMads, rowMaxs, rowMeans2, rowMedians, rowMins,
rowOrderStats, rowProds, rowQuantiles, rowRanges, rowRanks,
rowSdDiffs, rowSds, rowSums2, rowTabulates, rowVarDiffs, rowVars,
rowWeightedMads, rowWeightedMeans, rowWeightedMedians,
rowWeightedSds, rowWeightedVars
Loading required package: GenomicRanges
Loading required package: stats4
Loading required package: BiocGenerics
Loading required package: generics
Attaching package: 'generics'
The following objects are masked from 'package:base':
as.difftime, as.factor, as.ordered, intersect, is.element, setdiff,
setequal, union
Attaching package: 'BiocGenerics'
The following objects are masked from 'package:stats':
IQR, mad, sd, var, xtabs
The following objects are masked from 'package:base':
Filter, Find, Map, Position, Reduce, anyDuplicated, aperm, append,
as.data.frame, basename, cbind, colnames, dirname, do.call,
duplicated, eval, evalq, get, grep, grepl, is.unsorted, lapply,
mapply, match, mget, order, paste, pmax, pmax.int, pmin, pmin.int,
rank, rbind, rownames, sapply, saveRDS, table, tapply, unique,
unsplit, which.max, which.min
Loading required package: S4Vectors
Attaching package: 'S4Vectors'
The following object is masked from 'package:utils':
findMatches
The following objects are masked from 'package:base':
I, expand.grid, unname
Loading required package: IRanges
Loading required package: Seqinfo
Loading required package: Biobase
Welcome to Bioconductor
Vignettes contain introductory material; view with
'browseVignettes()'. To cite Bioconductor, see
'citation("Biobase")', and for packages 'citation("pkgname")'.
Attaching package: 'Biobase'
The following object is masked from 'package:MatrixGenerics':
rowMedians
The following objects are masked from 'package:matrixStats':
anyMissing, rowMedians
>
> test_check("notameStats")
Running tests in parallel requires the 3rd edition
INFO [2025-10-15 00:01:59] Starting to compute Cohen's D between groups B & A from time change 2 - 1
INFO [2025-10-15 00:01:59] Cohen's D computed.
INFO [2025-10-15 00:01:59] Starting to compute Cohen's D between groups B & A
INFO [2025-10-15 00:01:59] Cohen's D computed.
INFO [2025-10-15 00:02:00] Starting to compute fold changes.
INFO [2025-10-15 00:02:00] Fold changes computed.
INFO [2025-10-15 00:02:00] Starting to compute fold changes.
INFO [2025-10-15 00:02:00] Fold changes computed.
INFO [2025-10-15 00:02:01] Starting linear regression.
INFO [2025-10-15 00:02:02] Linear regression performed.
INFO [2025-10-15 00:02:02] Starting linear regression.
INFO [2025-10-15 00:02:03] Linear regression performed.
INFO [2025-10-15 00:02:03]
92% of features flagged for low quality
INFO [2025-10-15 00:02:03] Starting linear regression.
INFO [2025-10-15 00:02:04] Linear regression performed.
INFO [2025-10-15 00:02:04] Starting logistic regression
INFO [2025-10-15 00:02:06] Logistic regression performed.
INFO [2025-10-15 00:02:06] Starting logistic regression
INFO [2025-10-15 00:02:07] Logistic regression performed.
INFO [2025-10-15 00:02:08] Starting to compute Cohen's D between groups B & A
INFO [2025-10-15 00:02:08] Cohen's D computed.
INFO [2025-10-15 00:02:08] Starting to compute Cohen's D between groups C & A
INFO [2025-10-15 00:02:08] Cohen's D computed.
INFO [2025-10-15 00:02:08] Starting to compute Cohen's D between groups C & B
INFO [2025-10-15 00:02:08] Cohen's D computed.
INFO [2025-10-15 00:02:09] Starting to compute Cohen's D between groups B & A from time change 2 - 1
INFO [2025-10-15 00:02:10] Cohen's D computed.
INFO [2025-10-15 00:02:10] Starting to compute Cohen's D between groups B & A from time change 3 - 1
INFO [2025-10-15 00:02:10] Cohen's D computed.
INFO [2025-10-15 00:02:10] Starting to compute Cohen's D between groups B & A from time change 3 - 2
INFO [2025-10-15 00:02:10] Cohen's D computed.
INFO [2025-10-15 00:02:10] Starting to compute Cohen's D between groups C & A from time change 2 - 1
INFO [2025-10-15 00:02:10] Cohen's D computed.
INFO [2025-10-15 00:02:11] Starting to compute Cohen's D between groups C & A from time change 3 - 1
INFO [2025-10-15 00:02:11] Cohen's D computed.
INFO [2025-10-15 00:02:11] Starting to compute Cohen's D between groups C & A from time change 3 - 2
INFO [2025-10-15 00:02:11] Cohen's D computed.
INFO [2025-10-15 00:02:11] Starting to compute Cohen's D between groups C & B from time change 2 - 1
INFO [2025-10-15 00:02:11] Cohen's D computed.
INFO [2025-10-15 00:02:12] Starting to compute Cohen's D between groups C & B from time change 3 - 1
INFO [2025-10-15 00:02:12] Cohen's D computed.
INFO [2025-10-15 00:02:12] Starting to compute Cohen's D between groups C & B from time change 3 - 2
INFO [2025-10-15 00:02:12] Cohen's D computed.
INFO [2025-10-15 00:02:12] Starting to compute Cohen's D between groups B & A from time change 2 - 1
INFO [2025-10-15 00:02:12] Cohen's D computed.
INFO [2025-10-15 00:02:13] Starting to compute Cohen's D between groups B & A from time change 3 - 1
INFO [2025-10-15 00:02:13] Cohen's D computed.
INFO [2025-10-15 00:02:13] Starting to compute Cohen's D between groups B & A from time change 3 - 2
INFO [2025-10-15 00:02:13] Cohen's D computed.
INFO [2025-10-15 00:02:13] Starting to compute Cohen's D between groups C & A from time change 2 - 1
INFO [2025-10-15 00:02:13] Cohen's D computed.
INFO [2025-10-15 00:02:13] Starting to compute Cohen's D between groups C & A from time change 3 - 1
INFO [2025-10-15 00:02:14] Cohen's D computed.
INFO [2025-10-15 00:02:14] Starting to compute Cohen's D between groups C & A from time change 3 - 2
INFO [2025-10-15 00:02:14] Cohen's D computed.
INFO [2025-10-15 00:02:14] Starting to compute Cohen's D between groups C & B from time change 2 - 1
INFO [2025-10-15 00:02:14] Cohen's D computed.
INFO [2025-10-15 00:02:14] Starting to compute Cohen's D between groups C & B from time change 3 - 1
INFO [2025-10-15 00:02:15] Cohen's D computed.
INFO [2025-10-15 00:02:15] Starting to compute Cohen's D between groups C & B from time change 3 - 2
INFO [2025-10-15 00:02:15] Cohen's D computed.
INFO [2025-10-15 00:02:15] Starting to compute Cohen's D between groups B & A from time change 2 - 1
INFO [2025-10-15 00:02:15] Cohen's D computed.
INFO [2025-10-15 00:02:15] Starting to compute Cohen's D between groups B & A from time change 3 - 1
INFO [2025-10-15 00:02:15] Cohen's D computed.
INFO [2025-10-15 00:02:16] Starting to compute Cohen's D between groups B & A from time change 3 - 2
INFO [2025-10-15 00:02:16] Cohen's D computed.
INFO [2025-10-15 00:02:16] Starting to compute Cohen's D between groups C & A from time change 2 - 1
INFO [2025-10-15 00:02:16] Cohen's D computed.
INFO [2025-10-15 00:02:16] Starting to compute Cohen's D between groups C & B from time change 2 - 1
INFO [2025-10-15 00:02:17] Cohen's D computed.
INFO [2025-10-15 00:02:17] Starting to compute Cohen's D between groups B & A from time change 2 - 1
INFO [2025-10-15 00:02:17] Cohen's D computed.
INFO [2025-10-15 00:02:17] Starting to compute Cohen's D between groups B & A from time change 3 - 1
INFO [2025-10-15 00:02:17] Cohen's D computed.
INFO [2025-10-15 00:02:17] Starting to compute Cohen's D between groups B & A from time change 3 - 2
INFO [2025-10-15 00:02:18] Cohen's D computed.
INFO [2025-10-15 00:02:18] Starting to compute Cohen's D between groups C & A from time change 2 - 1
INFO [2025-10-15 00:02:18] Cohen's D computed.
INFO [2025-10-15 00:02:18] Starting to compute Cohen's D between groups C & B from time change 2 - 1
INFO [2025-10-15 00:02:18] Cohen's D computed.
INFO [2025-10-15 00:02:19] Starting to compute Cohen's D between groups B & A from time change 3 - 2
INFO [2025-10-15 00:02:19] Cohen's D computed.
INFO [2025-10-15 00:02:19] Starting to compute Cohen's D between groups C & A from time change 2 - 1
INFO [2025-10-15 00:02:19] Cohen's D computed.
INFO [2025-10-15 00:02:19] Starting to compute Cohen's D between groups C & A from time change 3 - 1
INFO [2025-10-15 00:02:20] Cohen's D computed.
INFO [2025-10-15 00:02:20] Starting to compute Cohen's D between groups C & A from time change 3 - 2
INFO [2025-10-15 00:02:20] Cohen's D computed.
INFO [2025-10-15 00:02:20] Starting to compute Cohen's D between groups C & B from time change 2 - 1
INFO [2025-10-15 00:02:20] Cohen's D computed.
INFO [2025-10-15 00:02:20] Starting to compute Cohen's D between groups C & B from time change 3 - 1
INFO [2025-10-15 00:02:20] Cohen's D computed.
INFO [2025-10-15 00:02:21] Starting to compute Cohen's D between groups C & B from time change 3 - 2
INFO [2025-10-15 00:02:21] Cohen's D computed.
INFO [2025-10-15 00:02:21] Starting paired tests for 1 & 2
INFO [2025-10-15 00:02:21] Found 20 complete pairs.
INFO [2025-10-15 00:02:21] Paired tests performed.
INFO [2025-10-15 00:02:22] Starting tests for 1 & 2
INFO [2025-10-15 00:02:22] Tests performed
INFO [2025-10-15 00:02:22] Starting tests for 1 & 3
INFO [2025-10-15 00:02:22] Tests performed
INFO [2025-10-15 00:02:22] Starting tests for 2 & 3
INFO [2025-10-15 00:02:22] Tests performed
INFO [2025-10-15 00:02:23] Starting tests for 1 & 2
INFO [2025-10-15 00:02:23] Tests performed
INFO [2025-10-15 00:02:23] Starting tests for 1 & 3
INFO [2025-10-15 00:02:23] Tests performed
INFO [2025-10-15 00:02:23] Starting tests for 2 & 3
INFO [2025-10-15 00:02:24] Tests performed
INFO [2025-10-15 00:02:24] Starting paired tests for 1 & 2
INFO [2025-10-15 00:02:24] Found 4 complete pairs.
INFO [2025-10-15 00:02:24] Paired tests performed.
INFO [2025-10-15 00:02:24] Starting paired tests for 1 & 3
INFO [2025-10-15 00:02:24] Found 4 complete pairs.
INFO [2025-10-15 00:02:24] Paired tests performed.
INFO [2025-10-15 00:02:24] Starting paired tests for 2 & 3
INFO [2025-10-15 00:02:24] Found 4 complete pairs.
INFO [2025-10-15 00:02:24] Paired tests performed.
INFO [2025-10-15 00:02:25] Starting paired tests for 1 & 2
INFO [2025-10-15 00:02:25] Found 8 complete pairs.
INFO [2025-10-15 00:02:25] Paired tests performed.
INFO [2025-10-15 00:02:25] Starting paired tests for 1 & 3
INFO [2025-10-15 00:02:25] Found 8 complete pairs.
INFO [2025-10-15 00:02:25] Paired tests performed.
INFO [2025-10-15 00:02:26] Starting paired tests for 2 & 3
INFO [2025-10-15 00:02:26] Found 8 complete pairs.
INFO [2025-10-15 00:02:26] Paired tests performed.
INFO [2025-10-15 00:02:26] Starting paired tests for 1 & 2
INFO [2025-10-15 00:02:26] Found 4 complete pairs.
INFO [2025-10-15 00:02:26] Paired tests performed.
INFO [2025-10-15 00:02:26] Starting paired tests for 1 & 3
INFO [2025-10-15 00:02:26] Found 4 complete pairs.
INFO [2025-10-15 00:02:26] Paired tests performed.
INFO [2025-10-15 00:02:27] Starting paired tests for 2 & 3
INFO [2025-10-15 00:02:27] Found 4 complete pairs.
INFO [2025-10-15 00:02:27] Paired tests performed.
INFO [2025-10-15 00:02:27] Starting tests for A & B
INFO [2025-10-15 00:02:28] Tests performed
INFO [2025-10-15 00:02:29] Starting paired tests for 1 & 2
INFO [2025-10-15 00:02:29] Found 20 complete pairs.
INFO [2025-10-15 00:02:30] Paired tests performed.
INFO [2025-10-15 00:02:31] Starting tests for 1 & 2
INFO [2025-10-15 00:02:31] Tests performed
INFO [2025-10-15 00:02:31] Starting tests for 1 & 3
INFO [2025-10-15 00:02:32] Tests performed
INFO [2025-10-15 00:02:32] Starting tests for 2 & 3
INFO [2025-10-15 00:02:32] Tests performed
INFO [2025-10-15 00:02:33] Starting tests for 1 & 2
INFO [2025-10-15 00:02:33] Tests performed
INFO [2025-10-15 00:02:33] Starting tests for 1 & 3
INFO [2025-10-15 00:02:34] Tests performed
INFO [2025-10-15 00:02:34] Starting tests for 2 & 3
INFO [2025-10-15 00:02:35] Tests performed
INFO [2025-10-15 00:02:35] Starting paired tests for 1 & 2
INFO [2025-10-15 00:02:35] Found 4 complete pairs.
INFO [2025-10-15 00:02:35] Paired tests performed.
INFO [2025-10-15 00:02:35] Starting paired tests for 1 & 3
INFO [2025-10-15 00:02:35] Found 4 complete pairs.
INFO [2025-10-15 00:02:35] Paired tests performed.
INFO [2025-10-15 00:02:35] Starting paired tests for 2 & 3
INFO [2025-10-15 00:02:35] Found 4 complete pairs.
INFO [2025-10-15 00:02:36] Paired tests performed.
INFO [2025-10-15 00:02:36] Starting correlation tests.
INFO [2025-10-15 00:02:36] Performing correlation tests for single object
INFO [2025-10-15 00:02:36] Correlation tests performed.
INFO [2025-10-15 00:02:36] Starting correlation tests.
INFO [2025-10-15 00:02:36] Starting correlation tests.
INFO [2025-10-15 00:02:36] Starting correlation tests.
INFO [2025-10-15 00:02:36] Starting correlation tests.
INFO [2025-10-15 00:02:36] Performing correlation tests for two objects
INFO [2025-10-15 00:02:36] Correlation tests performed.
INFO [2025-10-15 00:02:37] Starting correlation tests.
INFO [2025-10-15 00:02:37] Performing correlation tests for two objects
INFO [2025-10-15 00:02:37] Correlation tests performed.
INFO [2025-10-15 00:02:37] Starting paired tests for 1 & 2
INFO [2025-10-15 00:02:37] Found 20 complete pairs.
INFO [2025-10-15 00:02:38] Paired tests performed.
INFO [2025-10-15 00:02:38] Starting tests for A & B
INFO [2025-10-15 00:02:38] Tests performed
[ FAIL 0 | WARN 1 | SKIP 0 | PASS 88 ]
[ FAIL 0 | WARN 1 | SKIP 0 | PASS 88 ]
>
> proc.time()
user system elapsed
63.574 39.823 53.934
notameStats.Rcheck/notameStats-Ex.timings
| name | user | system | elapsed | |
| cohens_d | 3.248 | 0.631 | 3.318 | |
| fit_rf | 0.175 | 0.026 | 0.203 | |
| fold_change | 0.491 | 0.506 | 0.511 | |
| importance_rf | 0.151 | 0.023 | 0.176 | |
| muvr_analysis | 16.743 | 0.522 | 17.409 | |
| perform_auc | 9.382 | 3.474 | 3.719 | |
| perform_correlation_tests | 6.748 | 3.958 | 4.317 | |
| perform_homoscedasticity_tests | 0.898 | 0.651 | 0.578 | |
| perform_kruskal_wallis | 0.401 | 0.403 | 0.325 | |
| perform_lm | 2.193 | 1.478 | 1.243 | |
| perform_lm_anova | 0.737 | 0.523 | 0.480 | |
| perform_lmer | 9.372 | 3.187 | 3.891 | |
| perform_logistic | 3.923 | 2.047 | 1.753 | |
| perform_non_parametric | 9.868 | 5.988 | 5.788 | |
| perform_oneway_anova | 0.539 | 0.980 | 0.707 | |
| perform_permanova | 1.430 | 0.125 | 1.564 | |
| perform_t_test | 1.852 | 2.060 | 2.243 | |
| pls | 8.576 | 0.247 | 8.876 | |
| pls_da | 19.366 | 2.376 | 22.003 | |
| summarize_results | 2.163 | 1.251 | 1.022 | |
| summary_statistics | 1.615 | 1.217 | 1.059 | |