Britta Velten
| Snapshot Date: 2025-08-29 13:45 -0400 (Fri, 29 Aug 2025) |
| git_url: https://git.bioconductor.org/packages/graper |
| git_branch: devel |
| git_last_commit: 82b0592 |
| git_last_commit_date: 2025-06-24 03:15:40 -0400 (Tue, 24 Jun 2025) |
| Back to Multiple platform build/check report for BioC 3.22: simplified long |
|
This page was generated on 2025-08-30 12:04 -0400 (Sat, 30 Aug 2025).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 24.04.3 LTS) | x86_64 | 4.5.1 (2025-06-13) -- "Great Square Root" | 4824 |
| lconway | macOS 12.7.1 Monterey | x86_64 | 4.5.1 (2025-06-13) -- "Great Square Root" | 4615 |
| kjohnson3 | macOS 13.7.7 Ventura | arm64 | 4.5.1 Patched (2025-06-14 r88325) -- "Great Square Root" | 4562 |
| taishan | Linux (openEuler 24.03 LTS) | aarch64 | 4.5.0 (2025-04-11) -- "How About a Twenty-Six" | 4541 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 907/2320 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| graper 1.25.2 (landing page) Britta Velten
| nebbiolo2 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | | ||||||||
| lconway | macOS 12.7.1 Monterey / x86_64 | OK | OK | OK | OK | | ||||||||
| kjohnson3 | macOS 13.7.7 Ventura / arm64 | OK | OK | OK | OK | | ||||||||
| taishan | Linux (openEuler 24.03 LTS) / aarch64 | OK | OK | OK | ||||||||||
|
To the developers/maintainers of the graper package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: graper |
| Version: 1.25.2 |
| Command: /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.22-bioc/R/site-library --timings graper_1.25.2.tar.gz |
| StartedAt: 2025-08-29 23:20:10 -0400 (Fri, 29 Aug 2025) |
| EndedAt: 2025-08-29 23:21:34 -0400 (Fri, 29 Aug 2025) |
| EllapsedTime: 84.1 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: graper.Rcheck |
| Warnings: 0 |
##############################################################################
##############################################################################
###
### Running command:
###
### /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.22-bioc/R/site-library --timings graper_1.25.2.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/home/biocbuild/bbs-3.22-bioc/meat/graper.Rcheck’
* using R version 4.5.1 (2025-06-13)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
gcc (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0
GNU Fortran (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0
* running under: Ubuntu 24.04.3 LTS
* using session charset: UTF-8
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.25.2’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* used C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0’
* checking installed package size ... INFO
installed size is 6.0Mb
sub-directories of 1Mb or more:
libs 5.8Mb
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... NOTE
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘testthat.R’
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... OK
* checking PDF version of manual ... OK
* DONE
Status: 2 NOTEs
See
‘/home/biocbuild/bbs-3.22-bioc/meat/graper.Rcheck/00check.log’
for details.
graper.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD INSTALL graper ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.22-bioc/R/site-library’ * installing *source* package ‘graper’ ... ** this is package ‘graper’ version ‘1.25.2’ ** using staged installation ** libs using C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0’ g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.22-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/BH/include' -I/usr/local/include -fpic -g -O2 -Wall -Werror=format-security -c RcppExports.cpp -o RcppExports.o g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.22-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/BH/include' -I/usr/local/include -fpic -g -O2 -Wall -Werror=format-security -c fit_graper.cpp -o fit_graper.o g++ -std=gnu++17 -shared -L/home/biocbuild/bbs-3.22-bioc/R/lib -L/usr/local/lib -o graper.so RcppExports.o fit_graper.o -llapack -L/home/biocbuild/bbs-3.22-bioc/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/biocbuild/bbs-3.22-bioc/R/lib -lR installing to /home/biocbuild/bbs-3.22-bioc/R/site-library/00LOCK-graper/00new/graper/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (graper)
graper.Rcheck/tests/testthat.Rout
R version 4.5.1 (2025-06-13) -- "Great Square Root"
Copyright (C) 2025 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(testthat)
> library(graper)
>
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-849.498
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-579.121
ELB improved by 270.377
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-519.213
ELB improved by 59.9074
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-481.859
ELB improved by 37.3543
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-466.24
ELB improved by 15.6192
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-459.572
ELB improved by 6.66726
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-455.123
ELB improved by 4.44944
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-451.076
ELB improved by 4.04671
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.779
ELB improved by 4.29764
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.975
ELB improved by 4.80318
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.77
ELB improved by 5.20528
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.901
ELB improved by 4.86949
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.236
ELB improved by 3.66507
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.85
ELB improved by 2.38565
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.334
ELB improved by 1.51567
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.304
ELB improved by 1.03074
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.544
ELB improved by 0.759401
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.954
ELB improved by 0.590117
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.479
ELB improved by 0.47551
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.085
ELB improved by 0.393234
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.754
ELB improved by 0.331703
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.468
ELB improved by 0.285467
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.217
ELB improved by 0.251529
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.989
ELB improved by 0.227499
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.778
ELB improved by 0.211342
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.576
ELB improved by 0.201631
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.378
ELB improved by 0.197696
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.179
ELB improved by 0.199658
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.97
ELB improved by 0.208495
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.744
ELB improved by 0.226152
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.489
ELB improved by 0.255565
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.188
ELB improved by 0.300201
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.826
ELB improved by 0.362815
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.381
ELB improved by 0.444417
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.835
ELB improved by 0.545649
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.167
ELB improved by 0.668576
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.355
ELB improved by 0.812162
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.39
ELB improved by 0.964308
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.288
ELB improved by 1.10222
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.087
ELB improved by 1.20108
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.843
ELB improved by 1.24419
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.614
ELB improved by 1.22916
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.445
ELB improved by 1.16837
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.359
ELB improved by 1.086
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.348
ELB improved by 1.01114
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.38
ELB improved by 0.968609
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.418
ELB improved by 0.961876
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.463
ELB improved by 0.954907
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.545
ELB improved by 0.917524
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.709
ELB improved by 0.836169
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.048
ELB improved by 0.661607
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.568
ELB improved by 0.479945
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.195
ELB improved by 0.372261
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.869
ELB improved by 0.326028
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.553
ELB improved by 0.316488
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.24
ELB improved by 0.312646
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.949
ELB improved by 0.290906
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.676
ELB improved by 0.273744
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.379
ELB improved by 0.297018
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.019
ELB improved by 0.359582
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.597
ELB improved by 0.421721
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.145
ELB improved by 0.452248
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.735
ELB improved by 0.410172
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.462
ELB improved by 0.272795
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.321
ELB improved by 0.140954
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.249
ELB improved by 0.0717489
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.206
ELB improved by 0.0429598
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.176
ELB improved by 0.0306977
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.151
ELB improved by 0.0244943
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.131
ELB improved by 0.020623
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.113
ELB improved by 0.0178008
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.097
ELB improved by 0.0155622
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.083
ELB improved by 0.0137144
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.071
ELB improved by 0.0121608
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.06
ELB improved by 0.0108422
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.051
ELB improved by 0.00971679
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-847.428
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-585.413
ELB improved by 262.015
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-523.799
ELB improved by 61.6134
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-477.687
ELB improved by 46.1125
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-453.169
ELB improved by 24.5177
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.1
ELB improved by 10.0697
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.903
ELB improved by 5.19632
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.898
ELB improved by 4.00577
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.269
ELB improved by 3.62817
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.847
ELB improved by 3.42255
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.733
ELB improved by 3.11382
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.091
ELB improved by 2.64155
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.976
ELB improved by 2.11499
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.295
ELB improved by 1.68103
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.902
ELB improved by 1.39314
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.694
ELB improved by 1.20833
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.632
ELB improved by 1.06189
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.71
ELB improved by 0.921685
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.919
ELB improved by 0.791484
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.236
ELB improved by 0.6829
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.64
ELB improved by 0.595878
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.116
ELB improved by 0.524177
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.651
ELB improved by 0.464803
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.233
ELB improved by 0.41847
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.847
ELB improved by 0.38592
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.481
ELB improved by 0.366166
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.123
ELB improved by 0.357134
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.767
ELB improved by 0.356736
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.403
ELB improved by 0.36341
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.027
ELB improved by 0.37622
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.632
ELB improved by 0.394754
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.213
ELB improved by 0.418967
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.764
ELB improved by 0.449042
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.279
ELB improved by 0.485297
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.751
ELB improved by 0.528203
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.172
ELB improved by 0.578676
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.533
ELB improved by 0.638833
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.82
ELB improved by 0.713226
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.011
ELB improved by 0.809311
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.075
ELB improved by 0.93573
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.967
ELB improved by 1.10759
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.641
ELB improved by 1.32631
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.264
ELB improved by 1.37756
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.2
ELB improved by 1.06317
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.514
ELB improved by 0.686112
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.083
ELB improved by 0.431589
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.803
ELB improved by 0.27948
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.614
ELB improved by 0.189618
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.478
ELB improved by 0.135162
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.378
ELB improved by 0.100477
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.301
ELB improved by 0.077004
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.241
ELB improved by 0.0602493
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.193
ELB improved by 0.0478796
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.154
ELB improved by 0.0386232
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.123
ELB improved by 0.0316936
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.096
ELB improved by 0.0265304
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.073
ELB improved by 0.0227018
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.053
ELB improved by 0.0198732
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.036
ELB improved by 0.0177924
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.019
ELB improved by 0.0162768
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.004
ELB improved by 0.0151997
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.99
ELB improved by 0.0144779
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.976
ELB improved by 0.0140604
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.962
ELB improved by 0.0139178
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.948
ELB improved by 0.0140317
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.933
ELB improved by 0.0143815
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.918
ELB improved by 0.0149265
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.903
ELB improved by 0.0155845
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.887
ELB improved by 0.0162136
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.87
ELB improved by 0.0166148
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.853
ELB improved by 0.0165756
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.837
ELB improved by 0.0159554
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.823
ELB improved by 0.0147692
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.809
ELB improved by 0.0132033
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.798
ELB improved by 0.0115354
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.788
ELB improved by 0.0100176
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.779
ELB improved by 0.00880101
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-909.014
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-567.998
ELB improved by 341.015
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-503.212
ELB improved by 64.7869
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-468.52
ELB improved by 34.6916
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-454.981
ELB improved by 13.539
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.269
ELB improved by 6.71201
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.097
ELB improved by 5.17166
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.314
ELB improved by 4.78383
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.538
ELB improved by 4.7754
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.627
ELB improved by 4.91078
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.617
ELB improved by 5.01046
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.738
ELB improved by 4.87864
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.366
ELB improved by 4.37262
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.81
ELB improved by 3.55573
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.152
ELB improved by 2.65819
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.275
ELB improved by 1.87667
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.968
ELB improved by 1.30708
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.024
ELB improved by 0.94378
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.303
ELB improved by 0.72095
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.729
ELB improved by 0.574059
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.263
ELB improved by 0.46572
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.883
ELB improved by 0.3802
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.572
ELB improved by 0.311557
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.315
ELB improved by 0.257041
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.1
ELB improved by 0.214488
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.919
ELB improved by 0.18161
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.762
ELB improved by 0.156174
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.626
ELB improved by 0.136291
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.506
ELB improved by 0.120516
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.398
ELB improved by 0.107801
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.3
ELB improved by 0.0973998
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.212
ELB improved by 0.088779
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.13
ELB improved by 0.0815495
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.055
ELB improved by 0.0754224
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.984
ELB improved by 0.0701785
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.919
ELB improved by 0.0656483
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.857
ELB improved by 0.0616992
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.799
ELB improved by 0.0582258
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.744
ELB improved by 0.055144
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.691
ELB improved by 0.0523857
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.641
ELB improved by 0.0498963
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.594
ELB improved by 0.0476314
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.548
ELB improved by 0.045555
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.505
ELB improved by 0.0436384
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.463
ELB improved by 0.0418583
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.423
ELB improved by 0.0401963
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.384
ELB improved by 0.038638
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.347
ELB improved by 0.0371721
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.311
ELB improved by 0.0357898
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.277
ELB improved by 0.0344846
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.243
ELB improved by 0.0332513
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.211
ELB improved by 0.0320863
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.18
ELB improved by 0.0309868
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.15
ELB improved by 0.0299506
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.121
ELB improved by 0.0289759
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.093
ELB improved by 0.0280612
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.066
ELB improved by 0.0272052
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.04
ELB improved by 0.0264064
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.014
ELB improved by 0.0256634
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.989
ELB improved by 0.0249747
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.965
ELB improved by 0.0243385
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.941
ELB improved by 0.023753
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.918
ELB improved by 0.0232163
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.895
ELB improved by 0.0227262
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.873
ELB improved by 0.0222806
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.851
ELB improved by 0.0218771
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.829
ELB improved by 0.0215135
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.808
ELB improved by 0.0211873
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.787
ELB improved by 0.020896
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.767
ELB improved by 0.0206372
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.746
ELB improved by 0.0204085
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.726
ELB improved by 0.0202075
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.706
ELB improved by 0.0200315
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.686
ELB improved by 0.0198783
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.666
ELB improved by 0.0197454
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.647
ELB improved by 0.0196303
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.627
ELB improved by 0.0195308
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.608
ELB improved by 0.0194443
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.588
ELB improved by 0.0193686
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.569
ELB improved by 0.0193013
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.55
ELB improved by 0.0192401
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.531
ELB improved by 0.0191825
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.511
ELB improved by 0.0191265
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.492
ELB improved by 0.0190697
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.473
ELB improved by 0.0190098
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.454
ELB improved by 0.0189449
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.436
ELB improved by 0.0188727
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.417
ELB improved by 0.0187913
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.398
ELB improved by 0.0186989
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.379
ELB improved by 0.0185936
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.361
ELB improved by 0.018474
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.343
ELB improved by 0.0183385
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.324
ELB improved by 0.018186
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.306
ELB improved by 0.0180153
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.289
ELB improved by 0.0178257
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.271
ELB improved by 0.0176166
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.254
ELB improved by 0.0173877
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.236
ELB improved by 0.0171389
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.22
ELB improved by 0.0168703
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.203
ELB improved by 0.0165824
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.187
ELB improved by 0.0162758
iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.171
ELB improved by 0.0159514
iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.155
ELB improved by 0.0156102
iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.14
ELB improved by 0.0152536
iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.125
ELB improved by 0.0148829
iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.111
ELB improved by 0.0144997
iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.096
ELB improved by 0.0141057
iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.083
ELB improved by 0.0137026
iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.069
ELB improved by 0.0132922
iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.057
ELB improved by 0.0128764
iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.044
ELB improved by 0.0124569
iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.032
ELB improved by 0.0120356
iteration 113
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.02
ELB improved by 0.0116143
iteration 114
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.009
ELB improved by 0.0111946
iteration 115
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.998
ELB improved by 0.0107781
iteration 116
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.988
ELB improved by 0.0103665
iteration 117
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.978
ELB improved by 0.00996113
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-857.202
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-561.258
ELB improved by 295.943
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-504.802
ELB improved by 56.4566
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-470.46
ELB improved by 34.342
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-454.569
ELB improved by 15.8906
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.33
ELB improved by 7.23929
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.356
ELB improved by 4.97412
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.619
ELB improved by 4.73617
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.447
ELB improved by 5.17268
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.758
ELB improved by 5.68833
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.139
ELB improved by 5.61984
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.494
ELB improved by 4.64419
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.273
ELB improved by 3.22122
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.25
ELB improved by 2.0228
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.98
ELB improved by 1.27042
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.126
ELB improved by 0.853798
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.5
ELB improved by 0.626297
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.004
ELB improved by 0.496263
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.587
ELB improved by 0.416357
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.224
ELB improved by 0.363145
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.899
ELB improved by 0.324929
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.603
ELB improved by 0.295763
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.331
ELB improved by 0.272631
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.077
ELB improved by 0.254125
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.837
ELB improved by 0.23983
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.607
ELB improved by 0.230074
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.381
ELB improved by 0.225856
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.152
ELB improved by 0.22868
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.913
ELB improved by 0.239525
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.657
ELB improved by 0.255693
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.39
ELB improved by 0.267262
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.127
ELB improved by 0.262771
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.884
ELB improved by 0.242879
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.666
ELB improved by 0.217715
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.472
ELB improved by 0.193974
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.299
ELB improved by 0.173203
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.144
ELB improved by 0.15522
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.004
ELB improved by 0.139655
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.878
ELB improved by 0.126198
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.764
ELB improved by 0.11458
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.659
ELB improved by 0.104561
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.563
ELB improved by 0.0959285
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.475
ELB improved by 0.0884998
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.392
ELB improved by 0.082126
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.316
ELB improved by 0.0766925
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.244
ELB improved by 0.0721211
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.175
ELB improved by 0.0683751
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.11
ELB improved by 0.065471
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.046
ELB improved by 0.0635048
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.984
ELB improved by 0.0627092
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.92
ELB improved by 0.0635838
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.853
ELB improved by 0.0672062
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.777
ELB improved by 0.0760133
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.681
ELB improved by 0.0958151
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.541
ELB improved by 0.140399
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.305
ELB improved by 0.235651
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.913
ELB improved by 0.391589
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.361
ELB improved by 0.552449
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.61
ELB improved by 0.750957
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.497
ELB improved by 1.11255
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.025
ELB improved by 1.47227
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.395
ELB improved by 1.63026
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.822
ELB improved by 1.57324
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.47
ELB improved by 1.35192
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.407
ELB improved by 1.06276
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.65
ELB improved by 0.757325
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.15
ELB improved by 0.499106
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.832
ELB improved by 0.31869
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.625
ELB improved by 0.206381
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.487
ELB improved by 0.138734
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.391
ELB improved by 0.0960611
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.323
ELB improved by 0.0672213
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.276
ELB improved by 0.0473433
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.242
ELB improved by 0.0340091
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.217
ELB improved by 0.0253234
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.197
ELB improved by 0.0196951
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.181
ELB improved by 0.0159707
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.168
ELB improved by 0.0134092
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.156
ELB improved by 0.0115648
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.146
ELB improved by 0.0101753
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.137
ELB improved by 0.00908635
ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
>
> proc.time()
user system elapsed
2.200 0.171 2.316
graper.Rcheck/graper-Ex.timings
| name | user | system | elapsed | |
| coef.graper | 0.058 | 0.005 | 0.056 | |
| getPIPs | 0.052 | 0.014 | 0.060 | |
| graper | 0.084 | 0.011 | 0.087 | |
| makeExampleData | 0.015 | 0.001 | 0.010 | |
| makeExampleDataWithUnequalGroups | 0.036 | 0.018 | 0.045 | |
| plotELBO | 0.202 | 0.018 | 0.209 | |
| plotGroupPenalties | 0.701 | 0.006 | 0.693 | |
| plotPosterior | 0.505 | 0.004 | 0.502 | |
| predict.graper | 2.065 | 0.009 | 2.062 | |
| print.graper | 0.056 | 0.002 | 0.052 | |