Britta Velten
| Snapshot Date: 2026-01-06 13:40 -0500 (Tue, 06 Jan 2026) |
| git_url: https://git.bioconductor.org/packages/graper |
| git_branch: devel |
| git_last_commit: 95474d7 |
| git_last_commit_date: 2025-10-29 10:49:21 -0500 (Wed, 29 Oct 2025) |
| Back to Multiple platform build/check report for BioC 3.23: simplified long |
|
This page was generated on 2026-01-07 11:35 -0500 (Wed, 07 Jan 2026).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) | x86_64 | R Under development (unstable) (2025-12-22 r89219) -- "Unsuffered Consequences" | 4815 |
| kjohnson3 | macOS 13.7.7 Ventura | arm64 | R Under development (unstable) (2025-11-04 r88984) -- "Unsuffered Consequences" | 4593 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 915/2332 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| graper 1.27.0 (landing page) Britta Velten
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | | ||||||||
| kjohnson3 | macOS 13.7.7 Ventura / arm64 | OK | OK | OK | OK | | ||||||||
|
To the developers/maintainers of the graper package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: graper |
| Version: 1.27.0 |
| Command: /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:graper.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings graper_1.27.0.tar.gz |
| StartedAt: 2026-01-06 20:13:24 -0500 (Tue, 06 Jan 2026) |
| EndedAt: 2026-01-06 20:13:57 -0500 (Tue, 06 Jan 2026) |
| EllapsedTime: 32.4 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: graper.Rcheck |
| Warnings: 0 |
##############################################################################
##############################################################################
###
### Running command:
###
### /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:graper.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings graper_1.27.0.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/Users/biocbuild/bbs-3.23-bioc/meat/graper.Rcheck’
* using R Under development (unstable) (2025-11-04 r88984)
* using platform: aarch64-apple-darwin20
* R was compiled by
Apple clang version 16.0.0 (clang-1600.0.26.6)
GNU Fortran (GCC) 14.2.0
* running under: macOS Ventura 13.7.8
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.27.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* used C++ compiler: ‘Apple clang version 15.0.0 (clang-1500.1.0.2.5)’
* used SDK: ‘MacOSX11.3.1.sdk’
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... INFO
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘testthat.R’
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE
Status: 1 NOTE
See
‘/Users/biocbuild/bbs-3.23-bioc/meat/graper.Rcheck/00check.log’
for details.
graper.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL graper ### ############################################################################## ############################################################################## * installing to library ‘/Library/Frameworks/R.framework/Versions/4.6-arm64/Resources/library’ * installing *source* package ‘graper’ ... ** this is package ‘graper’ version ‘1.27.0’ ** using staged installation ** libs using C++ compiler: ‘Apple clang version 15.0.0 (clang-1500.1.0.2.5)’ using SDK: ‘MacOSX11.3.1.sdk’ clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Library/Frameworks/R.framework/Versions/4.6-arm64/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.6-arm64/Resources/library/RcppArmadillo/include' -I'/Library/Frameworks/R.framework/Versions/4.6-arm64/Resources/library/BH/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Library/Frameworks/R.framework/Versions/4.6-arm64/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.6-arm64/Resources/library/RcppArmadillo/include' -I'/Library/Frameworks/R.framework/Versions/4.6-arm64/Resources/library/BH/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c fit_graper.cpp -o fit_graper.o clang++ -arch arm64 -std=gnu++17 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/arm64/lib -o graper.so RcppExports.o fit_graper.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/opt/gfortran/lib/gcc/aarch64-apple-darwin20.0/14.2.0 -L/opt/gfortran/lib -lemutls_w -lheapt_w -lgfortran -lquadmath -F/Library/Frameworks/R.framework/.. -framework R installing to /Library/Frameworks/R.framework/Versions/4.6-arm64/Resources/library/00LOCK-graper/00new/graper/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (graper)
graper.Rcheck/tests/testthat.Rout
R Under development (unstable) (2025-11-04 r88984) -- "Unsuffered Consequences"
Copyright (C) 2025 The R Foundation for Statistical Computing
Platform: aarch64-apple-darwin20
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(testthat)
> library(graper)
>
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-879.75
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-572.666
ELB improved by 307.084
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-511.673
ELB improved by 60.9929
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-475.412
ELB improved by 36.2616
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-460.413
ELB improved by 14.9987
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-453.42
ELB improved by 6.99315
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.065
ELB improved by 4.35549
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.437
ELB improved by 3.62705
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.857
ELB improved by 3.5804
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.09
ELB improved by 3.7674
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.11
ELB improved by 3.97975
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.125
ELB improved by 3.98477
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.543
ELB improved by 3.58243
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.716
ELB improved by 2.82676
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.701
ELB improved by 2.01462
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.322
ELB improved by 1.37957
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.359
ELB improved by 0.962484
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.648
ELB improved by 0.711478
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.081
ELB improved by 0.566768
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.597
ELB improved by 0.484494
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.159
ELB improved by 0.437236
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.75
ELB improved by 0.40926
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.358
ELB improved by 0.391787
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.979
ELB improved by 0.379728
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.609
ELB improved by 0.369885
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.248
ELB improved by 0.360168
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.899
ELB improved by 0.349348
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.562
ELB improved by 0.336962
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.239
ELB improved by 0.323141
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.931
ELB improved by 0.308359
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.637
ELB improved by 0.293249
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.359
ELB improved by 0.278499
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.094
ELB improved by 0.264786
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.841
ELB improved by 0.252723
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.599
ELB improved by 0.242831
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.363
ELB improved by 0.235573
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.132
ELB improved by 0.231433
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.901
ELB improved by 0.231017
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.665
ELB improved by 0.235133
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.421
ELB improved by 0.244818
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.159
ELB improved by 0.261266
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.874
ELB improved by 0.285773
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.553
ELB improved by 0.320341
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.184
ELB improved by 0.369387
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.745
ELB improved by 0.438986
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.215
ELB improved by 0.529671
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.573
ELB improved by 0.642691
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.806
ELB improved by 0.766079
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.045
ELB improved by 0.761672
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.444
ELB improved by 0.60068
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406
ELB improved by 0.444403
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.663
ELB improved by 0.336223
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.401
ELB improved by 0.262121
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.191
ELB improved by 0.209876
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.02
ELB improved by 0.17175
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.877
ELB improved by 0.142249
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.76
ELB improved by 0.117592
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.664
ELB improved by 0.0959648
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.587
ELB improved by 0.0772281
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.525
ELB improved by 0.0618429
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.475
ELB improved by 0.0499193
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.434
ELB improved by 0.0410241
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.399
ELB improved by 0.0344632
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.37
ELB improved by 0.0295675
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.344
ELB improved by 0.0258185
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.321
ELB improved by 0.0228564
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.301
ELB improved by 0.0204444
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.282
ELB improved by 0.0184294
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.266
ELB improved by 0.0167116
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.25
ELB improved by 0.0152247
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.236
ELB improved by 0.0139231
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.224
ELB improved by 0.0127742
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.212
ELB improved by 0.0117538
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.201
ELB improved by 0.0108433
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.191
ELB improved by 0.010028
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.182
ELB improved by 0.00929582
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-904.525
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-585.074
ELB improved by 319.452
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-524.938
ELB improved by 60.136
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-490.163
ELB improved by 34.7747
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-475.49
ELB improved by 14.6727
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-469.854
ELB improved by 5.63629
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-466.435
ELB improved by 3.41893
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-463.537
ELB improved by 2.89763
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-460.771
ELB improved by 2.76615
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-457.996
ELB improved by 2.77554
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-455.175
ELB improved by 2.82098
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-452.335
ELB improved by 2.83941
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.565
ELB improved by 2.77066
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.005
ELB improved by 2.55979
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.803
ELB improved by 2.20143
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.033
ELB improved by 1.77056
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.662
ELB improved by 1.37073
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.605
ELB improved by 1.05691
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.789
ELB improved by 0.816398
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.179
ELB improved by 0.610303
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.747
ELB improved by 0.431319
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.448
ELB improved by 0.299518
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.231
ELB improved by 0.216768
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.063
ELB improved by 0.167541
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.926
ELB improved by 0.137482
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.808
ELB improved by 0.117981
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.704
ELB improved by 0.104445
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.609
ELB improved by 0.0944513
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.522
ELB improved by 0.0866988
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.442
ELB improved by 0.0804604
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.367
ELB improved by 0.0753115
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.296
ELB improved by 0.0709906
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.228
ELB improved by 0.0673277
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.164
ELB improved by 0.0642058
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.103
ELB improved by 0.0615402
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.043
ELB improved by 0.0592675
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.986
ELB improved by 0.0573382
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.93
ELB improved by 0.0557131
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.876
ELB improved by 0.0543606
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.823
ELB improved by 0.0532552
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.77
ELB improved by 0.052376
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.719
ELB improved by 0.0517065
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.667
ELB improved by 0.0512334
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.616
ELB improved by 0.0509469
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.565
ELB improved by 0.0508401
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.515
ELB improved by 0.0509088
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.463
ELB improved by 0.0511516
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.412
ELB improved by 0.0515699
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.36
ELB improved by 0.0521683
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.307
ELB improved by 0.0529541
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.253
ELB improved by 0.0539385
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.198
ELB improved by 0.0551364
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.141
ELB improved by 0.0565673
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.083
ELB improved by 0.058256
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.023
ELB improved by 0.0602337
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.96
ELB improved by 0.0625389
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.895
ELB improved by 0.0652195
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.827
ELB improved by 0.0683333
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.755
ELB improved by 0.0719508
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.678
ELB improved by 0.0761548
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.597
ELB improved by 0.0810402
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.511
ELB improved by 0.086709
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.417
ELB improved by 0.0932585
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.317
ELB improved by 0.100758
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.207
ELB improved by 0.109212
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.089
ELB improved by 0.118513
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.961
ELB improved by 0.128395
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.822
ELB improved by 0.138435
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.674
ELB improved by 0.14811
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.517
ELB improved by 0.156908
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.353
ELB improved by 0.164437
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.182
ELB improved by 0.170453
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.007
ELB improved by 0.174834
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.83
ELB improved by 0.177525
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.651
ELB improved by 0.178521
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.473
ELB improved by 0.177873
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.298
ELB improved by 0.175699
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.126
ELB improved by 0.17219
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.958
ELB improved by 0.167588
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.796
ELB improved by 0.162148
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.64
ELB improved by 0.156082
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.49
ELB improved by 0.149518
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.348
ELB improved by 0.142523
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.212
ELB improved by 0.13522
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.084
ELB improved by 0.127986
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.963
ELB improved by 0.121625
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.846
ELB improved by 0.117269
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.73
ELB improved by 0.115763
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.613
ELB improved by 0.116334
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.498
ELB improved by 0.115362
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.39
ELB improved by 0.107983
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.297
ELB improved by 0.0930455
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.222
ELB improved by 0.0747919
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.164
ELB improved by 0.0581438
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.119
ELB improved by 0.0450671
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.084
ELB improved by 0.0353138
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.056
ELB improved by 0.0280677
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.033
ELB improved by 0.0226325
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.015
ELB improved by 0.018517
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.999
ELB improved by 0.0153777
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.986
ELB improved by 0.0129681
iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.975
ELB improved by 0.0111065
iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.965
ELB improved by 0.0096577
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-865.474
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-589.106
ELB improved by 276.368
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-528.383
ELB improved by 60.7233
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-486.573
ELB improved by 41.8095
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-467.294
ELB improved by 19.2792
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-458.918
ELB improved by 8.37597
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-453.994
ELB improved by 4.92422
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.048
ELB improved by 3.9455
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.5
ELB improved by 3.54797
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.177
ELB improved by 3.32383
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.064
ELB improved by 3.11262
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.222
ELB improved by 2.84206
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.732
ELB improved by 2.49
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.649
ELB improved by 2.08308
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.969
ELB improved by 1.67954
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.642
ELB improved by 1.32675
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.605
ELB improved by 1.0375
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.799
ELB improved by 0.805562
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.174
ELB improved by 0.625181
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.684
ELB improved by 0.490337
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.292
ELB improved by 0.391554
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.974
ELB improved by 0.318824
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.709
ELB improved by 0.264232
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.487
ELB improved by 0.222304
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.298
ELB improved by 0.189408
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.134
ELB improved by 0.163131
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.993
ELB improved by 0.141826
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.868
ELB improved by 0.124334
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.758
ELB improved by 0.10982
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.661
ELB improved by 0.0976641
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.573
ELB improved by 0.0874006
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.495
ELB improved by 0.0786732
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.424
ELB improved by 0.0712062
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.359
ELB improved by 0.064784
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.3
ELB improved by 0.0592364
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.245
ELB improved by 0.0544276
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.195
ELB improved by 0.0502482
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.148
ELB improved by 0.04661
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.105
ELB improved by 0.0434406
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.064
ELB improved by 0.0406806
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.026
ELB improved by 0.0382813
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.99
ELB improved by 0.036202
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.955
ELB improved by 0.0344092
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.922
ELB improved by 0.0328752
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.891
ELB improved by 0.031577
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.86
ELB improved by 0.030496
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.831
ELB improved by 0.0296169
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.802
ELB improved by 0.0289279
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.773
ELB improved by 0.0284199
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.745
ELB improved by 0.0280867
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.717
ELB improved by 0.0279245
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.689
ELB improved by 0.0279317
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.661
ELB improved by 0.0281093
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.633
ELB improved by 0.0284608
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.604
ELB improved by 0.0289919
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.574
ELB improved by 0.0297109
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.543
ELB improved by 0.030629
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.512
ELB improved by 0.0317599
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.479
ELB improved by 0.0331207
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.444
ELB improved by 0.0347315
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.407
ELB improved by 0.0366159
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.368
ELB improved by 0.0388014
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.327
ELB improved by 0.0413191
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.283
ELB improved by 0.0442038
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.235
ELB improved by 0.0474943
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.184
ELB improved by 0.0512328
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.129
ELB improved by 0.0554643
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.068
ELB improved by 0.0602357
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.003
ELB improved by 0.0655947
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.931
ELB improved by 0.0715872
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.853
ELB improved by 0.0782554
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.767
ELB improved by 0.0856338
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.674
ELB improved by 0.0937454
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.571
ELB improved by 0.102596
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.459
ELB improved by 0.112169
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.336
ELB improved by 0.122419
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.203
ELB improved by 0.133266
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.059
ELB improved by 0.144592
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.902
ELB improved by 0.156241
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.734
ELB improved by 0.168028
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.555
ELB improved by 0.179756
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.363
ELB improved by 0.19123
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.161
ELB improved by 0.202275
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.948
ELB improved by 0.212692
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.726
ELB improved by 0.222148
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.496
ELB improved by 0.230025
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.261
ELB improved by 0.235379
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.024
ELB improved by 0.237286
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.788
ELB improved by 0.235558
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.557
ELB improved by 0.231394
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.329
ELB improved by 0.227625
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.1
ELB improved by 0.228909
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.857
ELB improved by 0.242574
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.577
ELB improved by 0.280341
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.218
ELB improved by 0.358759
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.733
ELB improved by 0.485236
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.123
ELB improved by 0.610064
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.478
ELB improved by 0.645054
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.847
ELB improved by 0.631185
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.209
ELB improved by 0.637501
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.584
ELB improved by 0.625255
iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.028
ELB improved by 0.556559
iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.587
ELB improved by 0.440438
iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.273
ELB improved by 0.314168
iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.063
ELB improved by 0.209599
iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.928
ELB improved by 0.135635
iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.84
ELB improved by 0.0874271
iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.783
ELB improved by 0.0574554
iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.744
ELB improved by 0.0392943
iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.715
ELB improved by 0.0282888
iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.694
ELB improved by 0.0214379
iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.677
ELB improved by 0.0169702
iteration 113
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.663
ELB improved by 0.0138935
iteration 114
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.651
ELB improved by 0.0116614
iteration 115
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.641
ELB improved by 0.00996996
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-899.46
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-575.537
ELB improved by 323.923
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-515.347
ELB improved by 60.1894
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-479.715
ELB improved by 35.6318
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-464.477
ELB improved by 15.2384
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-457.909
ELB improved by 6.56815
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-453.767
ELB improved by 4.14229
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.311
ELB improved by 3.45575
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.073
ELB improved by 3.23736
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.923
ELB improved by 3.15088
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.842
ELB improved by 3.08038
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.888
ELB improved by 2.95401
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.179
ELB improved by 2.7094
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.859
ELB improved by 2.32019
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.025
ELB improved by 1.83399
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.676
ELB improved by 1.34848
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.729
ELB improved by 0.947083
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.067
ELB improved by 0.662531
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.585
ELB improved by 0.481482
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.214
ELB improved by 0.370949
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.913
ELB improved by 0.300605
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.663
ELB improved by 0.250665
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.452
ELB improved by 0.211245
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.273
ELB improved by 0.178786
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.121
ELB improved by 0.152202
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.99
ELB improved by 0.130684
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.877
ELB improved by 0.113286
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.778
ELB improved by 0.0991222
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.69
ELB improved by 0.0874868
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.612
ELB improved by 0.0778438
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.542
ELB improved by 0.0697829
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.479
ELB improved by 0.0629867
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.422
ELB improved by 0.0572087
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.37
ELB improved by 0.0522587
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.322
ELB improved by 0.0479898
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.278
ELB improved by 0.0442882
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.237
ELB improved by 0.0410647
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.198
ELB improved by 0.0382486
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.163
ELB improved by 0.0357833
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.129
ELB improved by 0.0336227
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.097
ELB improved by 0.0317289
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.067
ELB improved by 0.0300705
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.039
ELB improved by 0.0286213
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.011
ELB improved by 0.0273593
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.985
ELB improved by 0.0262659
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.96
ELB improved by 0.0253257
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.935
ELB improved by 0.0245254
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.911
ELB improved by 0.023854
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.888
ELB improved by 0.0233023
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.865
ELB improved by 0.0228625
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.843
ELB improved by 0.0225286
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.82
ELB improved by 0.0222953
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.798
ELB improved by 0.0221589
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.776
ELB improved by 0.0221165
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.754
ELB improved by 0.0221662
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.731
ELB improved by 0.0223072
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.709
ELB improved by 0.0225393
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.686
ELB improved by 0.0228635
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.663
ELB improved by 0.0232815
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.639
ELB improved by 0.0237959
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.615
ELB improved by 0.0244103
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.589
ELB improved by 0.0251292
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.563
ELB improved by 0.0259582
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.537
ELB improved by 0.0269039
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.509
ELB improved by 0.0279742
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.479
ELB improved by 0.0291782
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.449
ELB improved by 0.0305264
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.417
ELB improved by 0.0320307
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.383
ELB improved by 0.0337049
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.348
ELB improved by 0.0355645
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.31
ELB improved by 0.0376272
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.27
ELB improved by 0.0399129
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.228
ELB improved by 0.0424439
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.182
ELB improved by 0.0452459
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.134
ELB improved by 0.0483474
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.082
ELB improved by 0.0517811
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.027
ELB improved by 0.0555844
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.967
ELB improved by 0.0598002
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.902
ELB improved by 0.0644784
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.833
ELB improved by 0.0696782
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.757
ELB improved by 0.0754711
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.675
ELB improved by 0.0819455
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.586
ELB improved by 0.0892144
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.489
ELB improved by 0.0974275
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.382
ELB improved by 0.10679
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.264
ELB improved by 0.117593
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.134
ELB improved by 0.130253
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.989
ELB improved by 0.145359
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.825
ELB improved by 0.163624
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.639
ELB improved by 0.185528
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.429
ELB improved by 0.210064
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.197
ELB improved by 0.232522
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.953
ELB improved by 0.244344
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.713
ELB improved by 0.240029
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.489
ELB improved by 0.223911
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.284
ELB improved by 0.204199
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.099
ELB improved by 0.18498
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.933
ELB improved by 0.166806
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.783
ELB improved by 0.149451
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.65
ELB improved by 0.132853
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.533
ELB improved by 0.117133
iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.431
ELB improved by 0.102484
iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.342
ELB improved by 0.0890868
iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.265
ELB improved by 0.0770567
iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.198
ELB improved by 0.0664223
iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.141
ELB improved by 0.0571318
iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.092
ELB improved by 0.0490783
iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.05
ELB improved by 0.0421309
iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.014
ELB improved by 0.0361578
iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.983
ELB improved by 0.031038
iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.956
ELB improved by 0.0266639
iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.933
ELB improved by 0.0229406
iteration 113
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.913
ELB improved by 0.0197844
iteration 114
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.896
ELB improved by 0.0171208
iteration 115
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.881
ELB improved by 0.014884
iteration 116
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.868
ELB improved by 0.0130147
iteration 117
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.857
ELB improved by 0.0114592
iteration 118
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.847
ELB improved by 0.0101686
iteration 119
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.837
ELB improved by 0.00909885
ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
>
> proc.time()
user system elapsed
1.079 0.095 1.238
graper.Rcheck/graper-Ex.timings
| name | user | system | elapsed | |
| coef.graper | 0.014 | 0.006 | 0.020 | |
| getPIPs | 0.012 | 0.006 | 0.018 | |
| graper | 0.019 | 0.008 | 0.028 | |
| makeExampleData | 0.002 | 0.000 | 0.003 | |
| makeExampleDataWithUnequalGroups | 0.002 | 0.001 | 0.004 | |
| plotELBO | 0.115 | 0.008 | 0.124 | |
| plotGroupPenalties | 0.353 | 0.007 | 0.374 | |
| plotPosterior | 0.323 | 0.014 | 0.337 | |
| predict.graper | 0.215 | 0.031 | 0.257 | |
| print.graper | 0.011 | 0.005 | 0.016 | |