Britta Velten
| Snapshot Date: 2025-12-12 13:40 -0500 (Fri, 12 Dec 2025) |
| git_url: https://git.bioconductor.org/packages/graper |
| git_branch: devel |
| git_last_commit: 95474d7 |
| git_last_commit_date: 2025-10-29 10:49:21 -0500 (Wed, 29 Oct 2025) |
| Back to Multiple platform build/check report for BioC 3.23: simplified long |
|
This page was generated on 2025-12-13 11:47 -0500 (Sat, 13 Dec 2025).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) | x86_64 | R Under development (unstable) (2025-10-20 r88955) -- "Unsuffered Consequences" | 4874 |
| kjohnson3 | macOS 13.7.7 Ventura | arm64 | R Under development (unstable) (2025-11-04 r88984) -- "Unsuffered Consequences" | 4582 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 915/2332 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| graper 1.27.0 (landing page) Britta Velten
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | | ||||||||
| kjohnson3 | macOS 13.7.7 Ventura / arm64 | OK | OK | OK | OK | | ||||||||
|
To the developers/maintainers of the graper package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: graper |
| Version: 1.27.0 |
| Command: /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:graper.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings graper_1.27.0.tar.gz |
| StartedAt: 2025-12-12 20:31:31 -0500 (Fri, 12 Dec 2025) |
| EndedAt: 2025-12-12 20:32:03 -0500 (Fri, 12 Dec 2025) |
| EllapsedTime: 32.4 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: graper.Rcheck |
| Warnings: 0 |
##############################################################################
##############################################################################
###
### Running command:
###
### /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:graper.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings graper_1.27.0.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/Users/biocbuild/bbs-3.23-bioc/meat/graper.Rcheck’
* using R Under development (unstable) (2025-11-04 r88984)
* using platform: aarch64-apple-darwin20
* R was compiled by
Apple clang version 16.0.0 (clang-1600.0.26.6)
GNU Fortran (GCC) 14.2.0
* running under: macOS Ventura 13.7.8
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.27.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* used C++ compiler: ‘Apple clang version 15.0.0 (clang-1500.1.0.2.5)’
* used SDK: ‘MacOSX11.3.1.sdk’
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... INFO
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘testthat.R’
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE
Status: 1 NOTE
See
‘/Users/biocbuild/bbs-3.23-bioc/meat/graper.Rcheck/00check.log’
for details.
graper.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL graper ### ############################################################################## ############################################################################## * installing to library ‘/Library/Frameworks/R.framework/Versions/4.6-arm64/Resources/library’ * installing *source* package ‘graper’ ... ** this is package ‘graper’ version ‘1.27.0’ ** using staged installation ** libs using C++ compiler: ‘Apple clang version 15.0.0 (clang-1500.1.0.2.5)’ using SDK: ‘MacOSX11.3.1.sdk’ clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Library/Frameworks/R.framework/Versions/4.6-arm64/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.6-arm64/Resources/library/RcppArmadillo/include' -I'/Library/Frameworks/R.framework/Versions/4.6-arm64/Resources/library/BH/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Library/Frameworks/R.framework/Versions/4.6-arm64/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.6-arm64/Resources/library/RcppArmadillo/include' -I'/Library/Frameworks/R.framework/Versions/4.6-arm64/Resources/library/BH/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c fit_graper.cpp -o fit_graper.o clang++ -arch arm64 -std=gnu++17 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/arm64/lib -o graper.so RcppExports.o fit_graper.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/opt/gfortran/lib/gcc/aarch64-apple-darwin20.0/14.2.0 -L/opt/gfortran/lib -lemutls_w -lheapt_w -lgfortran -lquadmath -F/Library/Frameworks/R.framework/.. -framework R installing to /Library/Frameworks/R.framework/Versions/4.6-arm64/Resources/library/00LOCK-graper/00new/graper/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (graper)
graper.Rcheck/tests/testthat.Rout
R Under development (unstable) (2025-11-04 r88984) -- "Unsuffered Consequences"
Copyright (C) 2025 The R Foundation for Statistical Computing
Platform: aarch64-apple-darwin20
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(testthat)
> library(graper)
>
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-890.127
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-568.468
ELB improved by 321.659
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-506.977
ELB improved by 61.4915
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-466.395
ELB improved by 40.582
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.933
ELB improved by 17.462
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.565
ELB improved by 7.3674
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.453
ELB improved by 4.11266
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.561
ELB improved by 2.89151
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.193
ELB improved by 2.36817
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.061
ELB improved by 2.13149
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.029
ELB improved by 2.03236
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.024
ELB improved by 2.00516
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.005
ELB improved by 2.01851
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.956
ELB improved by 2.04925
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.886
ELB improved by 2.06965
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.836
ELB improved by 2.05036
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.858
ELB improved by 1.97801
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.997
ELB improved by 1.86076
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.3
ELB improved by 1.69743
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.835
ELB improved by 1.46476
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.661
ELB improved by 1.17426
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.771
ELB improved by 0.889961
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.104
ELB improved by 0.666802
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.587
ELB improved by 0.517479
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.159
ELB improved by 0.428077
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.779
ELB improved by 0.379422
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.423
ELB improved by 0.356456
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.073
ELB improved by 0.349456
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.72
ELB improved by 0.352755
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.357
ELB improved by 0.363473
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.976
ELB improved by 0.380887
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.57
ELB improved by 0.406514
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.125
ELB improved by 0.444843
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.621
ELB improved by 0.504052
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.028
ELB improved by 0.592702
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.325
ELB improved by 0.703075
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.53
ELB improved by 0.79468
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.696
ELB improved by 0.834403
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.861
ELB improved by 0.83441
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.046
ELB improved by 0.815874
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.256
ELB improved by 0.789791
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.495
ELB improved by 0.761174
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.764
ELB improved by 0.731071
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.065
ELB improved by 0.69835
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.402
ELB improved by 0.66363
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.767
ELB improved by 0.634092
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.141
ELB improved by 0.626056
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.482
ELB improved by 0.659724
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.756
ELB improved by 0.7255
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.023
ELB improved by 0.733123
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.397
ELB improved by 0.626172
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.909
ELB improved by 0.488313
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.538
ELB improved by 0.370256
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.271
ELB improved by 0.267468
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.086
ELB improved by 0.184893
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.956
ELB improved by 0.130048
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.858
ELB improved by 0.0982443
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.777
ELB improved by 0.0807461
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.705
ELB improved by 0.0716185
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.637
ELB improved by 0.0680555
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.568
ELB improved by 0.069261
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.492
ELB improved by 0.0758828
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.402
ELB improved by 0.0901278
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.286
ELB improved by 0.116077
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.128
ELB improved by 0.157631
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.921
ELB improved by 0.206825
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.693
ELB improved by 0.228807
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.495
ELB improved by 0.197899
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.346
ELB improved by 0.14837
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.227
ELB improved by 0.119211
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.113
ELB improved by 0.114548
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.987
ELB improved by 0.126017
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.843
ELB improved by 0.143229
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.692
ELB improved by 0.151746
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.552
ELB improved by 0.140018
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.442
ELB improved by 0.110076
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.367
ELB improved by 0.0741082
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.323
ELB improved by 0.0446798
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.296
ELB improved by 0.0265715
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.279
ELB improved by 0.0171754
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.266
ELB improved by 0.0125156
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.256
ELB improved by 0.010072
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.248
ELB improved by 0.00863897
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-884.759
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-555.46
ELB improved by 329.299
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-497.622
ELB improved by 57.8383
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-465.039
ELB improved by 32.5826
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-451.501
ELB improved by 13.538
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.966
ELB improved by 6.53506
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.351
ELB improved by 4.61508
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.191
ELB improved by 4.16018
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.899
ELB improved by 4.29188
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.214
ELB improved by 4.68559
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.143
ELB improved by 5.07098
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.078
ELB improved by 5.06461
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.678
ELB improved by 4.39978
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.353
ELB improved by 3.32519
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.082
ELB improved by 2.27128
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.611
ELB improved by 1.47055
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.648
ELB improved by 0.963279
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.998
ELB improved by 0.650138
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.548
ELB improved by 0.450364
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.219
ELB improved by 0.328923
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.96
ELB improved by 0.258142
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.744
ELB improved by 0.216163
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.554
ELB improved by 0.189887
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.382
ELB improved by 0.172375
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.222
ELB improved by 0.159996
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.071
ELB improved by 0.150768
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.928
ELB improved by 0.143534
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.79
ELB improved by 0.137576
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.658
ELB improved by 0.132423
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.53
ELB improved by 0.127763
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.407
ELB improved by 0.123388
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.287
ELB improved by 0.119162
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.172
ELB improved by 0.115008
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.062
ELB improved by 0.110885
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.955
ELB improved by 0.106784
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.852
ELB improved by 0.102714
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.753
ELB improved by 0.0986995
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.659
ELB improved by 0.0947703
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.568
ELB improved by 0.09096
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.48
ELB improved by 0.0873025
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.397
ELB improved by 0.0838305
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.316
ELB improved by 0.0805748
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.238
ELB improved by 0.077565
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.164
ELB improved by 0.0748306
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.091
ELB improved by 0.0724037
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.021
ELB improved by 0.0703216
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.952
ELB improved by 0.0686324
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.885
ELB improved by 0.0674017
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.818
ELB improved by 0.0667235
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.751
ELB improved by 0.0667366
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.684
ELB improved by 0.0676483
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.614
ELB improved by 0.0697668
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.54
ELB improved by 0.073535
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.461
ELB improved by 0.0795274
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.373
ELB improved by 0.0883052
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.273
ELB improved by 0.0999231
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.16
ELB improved by 0.113008
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.035
ELB improved by 0.124228
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.905
ELB improved by 0.129966
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.776
ELB improved by 0.129529
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.65
ELB improved by 0.125389
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.53
ELB improved by 0.120183
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.415
ELB improved by 0.115035
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.305
ELB improved by 0.110031
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.2
ELB improved by 0.104978
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.101
ELB improved by 0.0997209
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.006
ELB improved by 0.0941926
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.918
ELB improved by 0.0884016
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.836
ELB improved by 0.0824066
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.759
ELB improved by 0.0762979
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.689
ELB improved by 0.0701826
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.625
ELB improved by 0.0641728
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.567
ELB improved by 0.0583753
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.514
ELB improved by 0.0528842
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.466
ELB improved by 0.0477764
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.423
ELB improved by 0.0431108
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.384
ELB improved by 0.0389301
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.349
ELB improved by 0.0352668
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.316
ELB improved by 0.0321517
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.287
ELB improved by 0.0296297
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.259
ELB improved by 0.0277855
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.232
ELB improved by 0.0267954
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.205
ELB improved by 0.0270376
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.176
ELB improved by 0.0293549
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.14
ELB improved by 0.0357192
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.089
ELB improved by 0.0509416
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.003
ELB improved by 0.0864778
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.84
ELB improved by 0.162394
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.568
ELB improved by 0.272013
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.257
ELB improved by 0.311583
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.017
ELB improved by 0.23942
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.861
ELB improved by 0.155771
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.759
ELB improved by 0.102239
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.688
ELB improved by 0.0711461
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.636
ELB improved by 0.0525836
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.595
ELB improved by 0.0409172
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.561
ELB improved by 0.0331952
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.534
ELB improved by 0.0278286
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.51
ELB improved by 0.0239319
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.489
ELB improved by 0.0209966
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.47
ELB improved by 0.0187196
iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.453
ELB improved by 0.0169103
iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.438
ELB improved by 0.015441
iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.423
ELB improved by 0.0142206
iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.41
ELB improved by 0.0131809
iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.398
ELB improved by 0.0122698
iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.386
ELB improved by 0.011448
iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.376
ELB improved by 0.0106873
iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.366
ELB improved by 0.00996886
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-854.932
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-550.357
ELB improved by 304.574
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-495.777
ELB improved by 54.58
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-467.48
ELB improved by 28.2974
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-456.935
ELB improved by 10.5449
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-452.046
ELB improved by 4.88952
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.292
ELB improved by 3.75391
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.629
ELB improved by 3.66257
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.719
ELB improved by 3.90983
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.459
ELB improved by 4.26042
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.986
ELB improved by 4.4725
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.666
ELB improved by 4.32068
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.919
ELB improved by 3.74633
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.049
ELB improved by 2.87025
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.065
ELB improved by 1.98365
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.711
ELB improved by 1.35484
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.717
ELB improved by 0.993729
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.911
ELB improved by 0.806341
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.194
ELB improved by 0.716356
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.518
ELB improved by 0.676109
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.86
ELB improved by 0.657656
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.215
ELB improved by 0.645073
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.585
ELB improved by 0.629814
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.977
ELB improved by 0.608207
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.397
ELB improved by 0.57986
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.851
ELB improved by 0.546296
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.341
ELB improved by 0.509784
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.869
ELB improved by 0.472523
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.433
ELB improved by 0.436247
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.03
ELB improved by 0.402138
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.66
ELB improved by 0.370905
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.317
ELB improved by 0.3429
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.998
ELB improved by 0.318235
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.702
ELB improved by 0.29688
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.423
ELB improved by 0.278738
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.159
ELB improved by 0.263724
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.907
ELB improved by 0.251832
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.664
ELB improved by 0.243241
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.426
ELB improved by 0.238464
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.187
ELB improved by 0.238681
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.94
ELB improved by 0.246475
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.673
ELB improved by 0.267626
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.358
ELB improved by 0.314925
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.947
ELB improved by 0.410629
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.393
ELB improved by 0.553874
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.75
ELB improved by 0.643001
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.123
ELB improved by 0.627669
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.501
ELB improved by 0.621431
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.815
ELB improved by 0.686024
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.033
ELB improved by 0.782152
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.262
ELB improved by 0.7714
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.621
ELB improved by 0.64026
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.105
ELB improved by 0.515893
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.659
ELB improved by 0.446245
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.218
ELB improved by 0.441207
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.689
ELB improved by 0.528939
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.954
ELB improved by 0.734679
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.024
ELB improved by 0.930044
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.118
ELB improved by 0.906356
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.404
ELB improved by 0.713841
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.991
ELB improved by 0.412938
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.778
ELB improved by 0.213041
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.623
ELB improved by 0.155545
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.431
ELB improved by 0.191785
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.11
ELB improved by 0.320635
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.654
ELB improved by 0.456684
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.262
ELB improved by 0.391714
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.996
ELB improved by 0.26599
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.819
ELB improved by 0.177016
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.715
ELB improved by 0.103738
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.658
ELB improved by 0.0572608
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.625
ELB improved by 0.0328183
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.604
ELB improved by 0.0207124
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.59
ELB improved by 0.0146035
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.578
ELB improved by 0.0112996
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.569
ELB improved by 0.00933835
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-857.744
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-574.424
ELB improved by 283.32
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-514.474
ELB improved by 59.9498
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-471.781
ELB improved by 42.6936
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.351
ELB improved by 21.4301
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.777
ELB improved by 8.57367
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.344
ELB improved by 4.43349
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.169
ELB improved by 3.17463
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.43
ELB improved by 2.73941
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.838
ELB improved by 2.59133
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.295
ELB improved by 2.54376
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.768
ELB improved by 2.52665
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.264
ELB improved by 2.50363
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.818
ELB improved by 2.44574
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.492
ELB improved by 2.32618
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.363
ELB improved by 2.12913
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.505
ELB improved by 1.85794
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.977
ELB improved by 1.52808
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.81
ELB improved by 1.16764
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.978
ELB improved by 0.831357
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.407
ELB improved by 0.570818
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.011
ELB improved by 0.396113
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.724
ELB improved by 0.287636
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.502
ELB improved by 0.22139
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.322
ELB improved by 0.179779
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.17
ELB improved by 0.15218
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.038
ELB improved by 0.132714
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.919
ELB improved by 0.118224
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.812
ELB improved by 0.107001
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.714
ELB improved by 0.0980831
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.623
ELB improved by 0.0908986
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.538
ELB improved by 0.0850838
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.458
ELB improved by 0.080394
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.381
ELB improved by 0.0766561
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.307
ELB improved by 0.0737448
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.236
ELB improved by 0.0715677
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.166
ELB improved by 0.0700573
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.097
ELB improved by 0.0691656
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.028
ELB improved by 0.0688602
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.959
ELB improved by 0.0691226
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.889
ELB improved by 0.0699462
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.817
ELB improved by 0.0713348
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.744
ELB improved by 0.0733024
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.668
ELB improved by 0.0758716
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.589
ELB improved by 0.0790738
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.506
ELB improved by 0.0829472
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.419
ELB improved by 0.0875363
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.326
ELB improved by 0.0928898
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.227
ELB improved by 0.0990582
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.121
ELB improved by 0.106091
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.007
ELB improved by 0.114034
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.884
ELB improved by 0.122925
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.751
ELB improved by 0.132792
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.607
ELB improved by 0.143657
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.452
ELB improved by 0.155535
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.283
ELB improved by 0.168449
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.101
ELB improved by 0.182443
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.903
ELB improved by 0.197604
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.689
ELB improved by 0.214091
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.457
ELB improved by 0.23216
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.205
ELB improved by 0.252183
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.93
ELB improved by 0.27466
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.63
ELB improved by 0.30019
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.301
ELB improved by 0.329364
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.938
ELB improved by 0.362494
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.539
ELB improved by 0.398992
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.103
ELB improved by 0.436246
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.634
ELB improved by 0.468309
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.148
ELB improved by 0.486243
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.665
ELB improved by 0.482738
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.207
ELB improved by 0.458595
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.784
ELB improved by 0.422448
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.403
ELB improved by 0.38107
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.073
ELB improved by 0.330196
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.809
ELB improved by 0.26379
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.615
ELB improved by 0.193929
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.477
ELB improved by 0.13818
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.378
ELB improved by 0.0995837
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.304
ELB improved by 0.0733397
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.249
ELB improved by 0.0551614
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.207
ELB improved by 0.0423821
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.174
ELB improved by 0.0333079
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.147
ELB improved by 0.0267967
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.125
ELB improved by 0.0220599
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.106
ELB improved by 0.0185531
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.09
ELB improved by 0.0159021
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.076
ELB improved by 0.0138505
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.064
ELB improved by 0.0122228
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.053
ELB improved by 0.0108997
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.043
ELB improved by 0.00979967
ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
>
> proc.time()
user system elapsed
1.082 0.099 1.210
graper.Rcheck/graper-Ex.timings
| name | user | system | elapsed | |
| coef.graper | 0.013 | 0.007 | 0.020 | |
| getPIPs | 0.011 | 0.005 | 0.017 | |
| graper | 0.019 | 0.009 | 0.027 | |
| makeExampleData | 0.002 | 0.000 | 0.003 | |
| makeExampleDataWithUnequalGroups | 0.002 | 0.001 | 0.003 | |
| plotELBO | 0.116 | 0.009 | 0.129 | |
| plotGroupPenalties | 0.359 | 0.006 | 0.378 | |
| plotPosterior | 0.307 | 0.016 | 0.340 | |
| predict.graper | 0.215 | 0.040 | 0.266 | |
| print.graper | 0.011 | 0.005 | 0.018 | |