Britta Velten
| Snapshot Date: 2026-02-17 13:40 -0500 (Tue, 17 Feb 2026) |
| git_url: https://git.bioconductor.org/packages/graper |
| git_branch: devel |
| git_last_commit: 95474d7 |
| git_last_commit_date: 2025-10-29 10:49:21 -0500 (Wed, 29 Oct 2025) |
| Back to Build/check report for BioC 3.23: simplified long |
|
This page was generated on 2026-02-18 11:32 -0500 (Wed, 18 Feb 2026).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) | x86_64 | R Under development (unstable) (2026-01-15 r89304) -- "Unsuffered Consequences" | 4867 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 926/2354 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| graper 1.27.0 (landing page) Britta Velten
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | | ||||||||
| See other builds for graper in R Universe. | ||||||||||||||
|
To the developers/maintainers of the graper package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: graper |
| Version: 1.27.0 |
| Command: /home/biocbuild/bbs-3.23-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.23-bioc/R/site-library --timings graper_1.27.0.tar.gz |
| StartedAt: 2026-02-18 00:22:36 -0500 (Wed, 18 Feb 2026) |
| EndedAt: 2026-02-18 00:24:07 -0500 (Wed, 18 Feb 2026) |
| EllapsedTime: 91.2 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: graper.Rcheck |
| Warnings: 0 |
##############################################################################
##############################################################################
###
### Running command:
###
### /home/biocbuild/bbs-3.23-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.23-bioc/R/site-library --timings graper_1.27.0.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/home/biocbuild/bbs-3.23-bioc/meat/graper.Rcheck’
* using R Under development (unstable) (2026-01-15 r89304)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
gcc (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0
GNU Fortran (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0
* running under: Ubuntu 24.04.3 LTS
* using session charset: UTF-8
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.27.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* used C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0’
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... INFO
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘testthat.R’
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... OK
* checking PDF version of manual ... OK
* DONE
Status: 1 NOTE
See
‘/home/biocbuild/bbs-3.23-bioc/meat/graper.Rcheck/00check.log’
for details.
graper.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.23-bioc/R/bin/R CMD INSTALL graper ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.23-bioc/R/site-library’ * installing *source* package ‘graper’ ... ** this is package ‘graper’ version ‘1.27.0’ ** using staged installation ** libs using C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0’ g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.23-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.23-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.23-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.23-bioc/R/site-library/BH/include' -I/usr/local/include -fpic -g -O2 -Wall -Werror=format-security -c RcppExports.cpp -o RcppExports.o g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.23-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.23-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.23-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.23-bioc/R/site-library/BH/include' -I/usr/local/include -fpic -g -O2 -Wall -Werror=format-security -c fit_graper.cpp -o fit_graper.o g++ -std=gnu++17 -shared -L/home/biocbuild/bbs-3.23-bioc/R/lib -L/usr/local/lib -o graper.so RcppExports.o fit_graper.o -llapack -L/home/biocbuild/bbs-3.23-bioc/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/biocbuild/bbs-3.23-bioc/R/lib -lR installing to /home/biocbuild/bbs-3.23-bioc/R/site-library/00LOCK-graper/00new/graper/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (graper)
graper.Rcheck/tests/testthat.Rout
R Under development (unstable) (2026-01-15 r89304) -- "Unsuffered Consequences"
Copyright (C) 2026 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(testthat)
> library(graper)
>
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-842.618
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-581.132
ELB improved by 261.486
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-522.24
ELB improved by 58.8927
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-480.218
ELB improved by 42.0216
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-459.521
ELB improved by 20.6969
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.937
ELB improved by 8.5843
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.92
ELB improved by 5.01724
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.328
ELB improved by 4.5916
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.255
ELB improved by 5.07297
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.199
ELB improved by 6.05642
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.976
ELB improved by 7.22289
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.271
ELB improved by 7.70426
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.737
ELB improved by 6.53491
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.511
ELB improved by 4.22583
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.197
ELB improved by 2.31361
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.921
ELB improved by 1.27636
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.142
ELB improved by 0.778965
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.613
ELB improved by 0.5283
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.224
ELB improved by 0.389608
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.918
ELB improved by 0.305963
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.666
ELB improved by 0.251875
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.451
ELB improved by 0.214957
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.262
ELB improved by 0.188684
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.093
ELB improved by 0.169366
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.938
ELB improved by 0.154789
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.795
ELB improved by 0.143554
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.66
ELB improved by 0.134743
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.532
ELB improved by 0.127724
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.41
ELB improved by 0.122051
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.293
ELB improved by 0.117395
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.179
ELB improved by 0.113509
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.069
ELB improved by 0.110202
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.962
ELB improved by 0.107322
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.857
ELB improved by 0.104747
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.755
ELB improved by 0.102381
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.654
ELB improved by 0.100146
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.556
ELB improved by 0.0979819
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.461
ELB improved by 0.0958434
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.367
ELB improved by 0.0936989
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.275
ELB improved by 0.0915288
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.186
ELB improved by 0.0893233
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.099
ELB improved by 0.0870811
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.014
ELB improved by 0.0848071
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.932
ELB improved by 0.0825101
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.851
ELB improved by 0.080201
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.774
ELB improved by 0.0778909
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.698
ELB improved by 0.0755902
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.625
ELB improved by 0.0733071
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.554
ELB improved by 0.0710478
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.485
ELB improved by 0.0688162
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.418
ELB improved by 0.0666144
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.354
ELB improved by 0.0644432
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.291
ELB improved by 0.0623033
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.231
ELB improved by 0.060196
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.173
ELB improved by 0.0581242
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.117
ELB improved by 0.0560939
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.063
ELB improved by 0.0541157
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.011
ELB improved by 0.0522073
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.96
ELB improved by 0.0503971
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.912
ELB improved by 0.0487312
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.864
ELB improved by 0.0472856
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.818
ELB improved by 0.0461902
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.772
ELB improved by 0.0456765
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.726
ELB improved by 0.0461763
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.678
ELB improved by 0.0485209
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.623
ELB improved by 0.0543189
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.557
ELB improved by 0.0664698
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.468
ELB improved by 0.0888625
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.346
ELB improved by 0.121682
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.195
ELB improved by 0.151512
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.035
ELB improved by 0.159539
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.885
ELB improved by 0.150819
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.742
ELB improved by 0.142452
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.603
ELB improved by 0.139425
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.464
ELB improved by 0.138687
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.327
ELB improved by 0.136514
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.197
ELB improved by 0.130931
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.074
ELB improved by 0.122029
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.963
ELB improved by 0.111228
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.863
ELB improved by 0.1002
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.773
ELB improved by 0.0902407
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.691
ELB improved by 0.0822559
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.613
ELB improved by 0.0771281
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.537
ELB improved by 0.0763297
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.454
ELB improved by 0.0830248
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.35
ELB improved by 0.103991
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.2
ELB improved by 0.149681
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.986
ELB improved by 0.214774
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.746
ELB improved by 0.239319
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.554
ELB improved by 0.192475
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.413
ELB improved by 0.14079
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.298
ELB improved by 0.115403
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.186
ELB improved by 0.111741
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.057
ELB improved by 0.128455
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.891
ELB improved by 0.166906
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.681
ELB improved by 0.209782
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.475
ELB improved by 0.205807
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.33
ELB improved by 0.144647
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.248
ELB improved by 0.0825193
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.203
ELB improved by 0.0449624
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.178
ELB improved by 0.0252925
iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.162
ELB improved by 0.0150722
iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.153
ELB improved by 0.0096174
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-833.504
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-547.617
ELB improved by 285.887
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-487.013
ELB improved by 60.6041
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.828
ELB improved by 37.1847
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.148
ELB improved by 15.68
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.241
ELB improved by 6.90723
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.32
ELB improved by 3.92123
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.454
ELB improved by 2.86601
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.909
ELB improved by 2.54503
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.389
ELB improved by 2.51964
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.753
ELB improved by 2.63629
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.928
ELB improved by 2.82508
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.916
ELB improved by 3.01159
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.831
ELB improved by 3.08464
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.894
ELB improved by 2.93743
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.334
ELB improved by 2.55959
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.274
ELB improved by 2.06015
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.708
ELB improved by 1.56609
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.564
ELB improved by 1.1441
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.746
ELB improved by 0.81747
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.162
ELB improved by 0.584265
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.737
ELB improved by 0.42539
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.417
ELB improved by 0.319642
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.167
ELB improved by 0.249803
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.964
ELB improved by 0.202911
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.794
ELB improved by 0.170154
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.648
ELB improved by 0.146125
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.52
ELB improved by 0.127692
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.407
ELB improved by 0.113044
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.306
ELB improved by 0.1011
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.215
ELB improved by 0.0911796
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.132
ELB improved by 0.0828305
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.057
ELB improved by 0.0757341
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.987
ELB improved by 0.0696572
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.923
ELB improved by 0.0644234
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.863
ELB improved by 0.0598955
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.807
ELB improved by 0.0559649
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.754
ELB improved by 0.0525442
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.705
ELB improved by 0.0495626
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.658
ELB improved by 0.0469618
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.613
ELB improved by 0.0446942
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.57
ELB improved by 0.0427205
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.529
ELB improved by 0.0410082
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.49
ELB improved by 0.0395311
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.451
ELB improved by 0.0382681
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.414
ELB improved by 0.0372026
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.378
ELB improved by 0.0363227
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.342
ELB improved by 0.0356206
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.307
ELB improved by 0.0350925
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.272
ELB improved by 0.0347394
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.238
ELB improved by 0.0345669
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.203
ELB improved by 0.034586
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.168
ELB improved by 0.0348137
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.133
ELB improved by 0.0352741
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.097
ELB improved by 0.0359991
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.06
ELB improved by 0.037029
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.022
ELB improved by 0.0384135
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.981
ELB improved by 0.0402102
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.939
ELB improved by 0.0424824
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.894
ELB improved by 0.045293
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.845
ELB improved by 0.0486938
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.792
ELB improved by 0.0527093
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.735
ELB improved by 0.0573181
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.673
ELB improved by 0.0624364
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.605
ELB improved by 0.0679166
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.531
ELB improved by 0.0735731
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.452
ELB improved by 0.0792351
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.367
ELB improved by 0.0848052
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.277
ELB improved by 0.090292
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.181
ELB improved by 0.0957967
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.079
ELB improved by 0.101471
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.972
ELB improved by 0.107474
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.858
ELB improved by 0.113951
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.737
ELB improved by 0.121021
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.608
ELB improved by 0.128783
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.471
ELB improved by 0.137306
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.324
ELB improved by 0.14663
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.168
ELB improved by 0.156758
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387
ELB improved by 0.167646
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.821
ELB improved by 0.179184
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.63
ELB improved by 0.191164
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.426
ELB improved by 0.203246
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.211
ELB improved by 0.214926
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.986
ELB improved by 0.225593
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.751
ELB improved by 0.234756
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.508
ELB improved by 0.242536
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.258
ELB improved by 0.250488
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.995
ELB improved by 0.262642
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.709
ELB improved by 0.286103
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.381
ELB improved by 0.328206
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.996
ELB improved by 0.384828
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.565
ELB improved by 0.431258
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.118
ELB improved by 0.446646
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.685
ELB improved by 0.433174
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.288
ELB improved by 0.3967
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.947
ELB improved by 0.341782
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.67
ELB improved by 0.276829
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.458
ELB improved by 0.212173
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.302
ELB improved by 0.155831
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.191
ELB improved by 0.111274
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.112
ELB improved by 0.0782668
iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.057
ELB improved by 0.0548122
iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.019
ELB improved by 0.0385659
iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.991
ELB improved by 0.0274846
iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.971
ELB improved by 0.0199977
iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.956
ELB improved by 0.0149694
iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.945
ELB improved by 0.0116035
iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.936
ELB improved by 0.00935071
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-893.275
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-589.584
ELB improved by 303.691
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-527.875
ELB improved by 61.7085
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-485.015
ELB improved by 42.86
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-465.337
ELB improved by 19.6783
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-457.111
ELB improved by 8.22577
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-451.59
ELB improved by 5.52108
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.699
ELB improved by 4.89165
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.964
ELB improved by 4.73452
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.272
ELB improved by 4.69206
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.741
ELB improved by 4.53061
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.626
ELB improved by 4.11517
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.148
ELB improved by 3.4782
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.389
ELB improved by 2.75938
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.309
ELB improved by 2.07961
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.79
ELB improved by 1.51869
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.677
ELB improved by 1.11359
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.831
ELB improved by 0.846184
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.159
ELB improved by 0.671169
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.611
ELB improved by 0.54839
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.157
ELB improved by 0.453898
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.78
ELB improved by 0.37746
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.464
ELB improved by 0.315811
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.197
ELB improved by 0.267198
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.967
ELB improved by 0.229381
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.767
ELB improved by 0.199843
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.591
ELB improved by 0.176373
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.434
ELB improved by 0.157305
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.292
ELB improved by 0.141471
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.164
ELB improved by 0.128073
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.048
ELB improved by 0.116557
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.941
ELB improved by 0.106531
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.843
ELB improved by 0.0977057
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.754
ELB improved by 0.0898653
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.671
ELB improved by 0.082844
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.594
ELB improved by 0.0765126
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.523
ELB improved by 0.0707695
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.458
ELB improved by 0.0655341
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.397
ELB improved by 0.0607417
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.341
ELB improved by 0.0563402
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.289
ELB improved by 0.052287
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.24
ELB improved by 0.0485472
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.195
ELB improved by 0.0450912
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.153
ELB improved by 0.0418944
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.114
ELB improved by 0.0389352
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.078
ELB improved by 0.036195
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.044
ELB improved by 0.0336572
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.013
ELB improved by 0.0313067
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.984
ELB improved by 0.02913
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.957
ELB improved by 0.0271145
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.931
ELB improved by 0.0252488
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.908
ELB improved by 0.0235221
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.886
ELB improved by 0.0219243
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.866
ELB improved by 0.020446
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.846
ELB improved by 0.0190786
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.829
ELB improved by 0.0178137
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.812
ELB improved by 0.0166438
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.796
ELB improved by 0.0155617
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.782
ELB improved by 0.0145608
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.768
ELB improved by 0.0136348
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.755
ELB improved by 0.0127781
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.743
ELB improved by 0.0119851
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.732
ELB improved by 0.0112511
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.722
ELB improved by 0.0105714
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.712
ELB improved by 0.00994183
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-902.065
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-592.738
ELB improved by 309.327
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-533.336
ELB improved by 59.4017
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-494.587
ELB improved by 38.7497
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-476.805
ELB improved by 17.7812
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-467.745
ELB improved by 9.06001
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-461.202
ELB improved by 6.54345
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-454.794
ELB improved by 6.40779
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.569
ELB improved by 7.22519
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.664
ELB improved by 7.90519
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.38
ELB improved by 7.2838
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.936
ELB improved by 5.44358
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.384
ELB improved by 3.55205
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.121
ELB improved by 2.26319
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.605
ELB improved by 1.51668
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.506
ELB improved by 1.09896
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.644
ELB improved by 0.86195
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.921
ELB improved by 0.722364
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.286
ELB improved by 0.635302
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.709
ELB improved by 0.576616
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.176
ELB improved by 0.532896
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.68
ELB improved by 0.496373
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.217
ELB improved by 0.462721
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.787
ELB improved by 0.430041
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.389
ELB improved by 0.397987
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.022
ELB improved by 0.366901
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.685
ELB improved by 0.337254
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.376
ELB improved by 0.309468
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.092
ELB improved by 0.283884
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.831
ELB improved by 0.260733
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.591
ELB improved by 0.240119
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.369
ELB improved by 0.222015
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.163
ELB improved by 0.206299
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.97
ELB improved by 0.192786
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.789
ELB improved by 0.181276
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.617
ELB improved by 0.171585
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.453
ELB improved by 0.163564
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.296
ELB improved by 0.157109
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.144
ELB improved by 0.152136
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.996
ELB improved by 0.148505
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.85
ELB improved by 0.145876
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.706
ELB improved by 0.143546
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.566
ELB improved by 0.14046
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.43
ELB improved by 0.13564
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.301
ELB improved by 0.128823
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.181
ELB improved by 0.120618
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.069
ELB improved by 0.111966
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.965
ELB improved by 0.103537
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.87
ELB improved by 0.0955939
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.782
ELB improved by 0.0881492
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.7
ELB improved by 0.0811367
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.626
ELB improved by 0.074491
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.558
ELB improved by 0.0681701
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.496
ELB improved by 0.062155
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.439
ELB improved by 0.0564432
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.388
ELB improved by 0.0510435
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.342
ELB improved by 0.0459697
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.301
ELB improved by 0.0412363
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.264
ELB improved by 0.0368549
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.231
ELB improved by 0.0328318
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.202
ELB improved by 0.0291666
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.176
ELB improved by 0.0258522
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.153
ELB improved by 0.0228757
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.133
ELB improved by 0.020219
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.115
ELB improved by 0.0178608
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.099
ELB improved by 0.0157774
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.086
ELB improved by 0.0139443
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.073
ELB improved by 0.0123369
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.062
ELB improved by 0.0109314
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.053
ELB improved by 0.00970537
ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
>
> proc.time()
user system elapsed
2.325 0.210 2.522
graper.Rcheck/graper-Ex.timings
| name | user | system | elapsed | |
| coef.graper | 0.049 | 0.017 | 0.067 | |
| getPIPs | 0.052 | 0.019 | 0.070 | |
| graper | 0.085 | 0.017 | 0.103 | |
| makeExampleData | 0.010 | 0.001 | 0.011 | |
| makeExampleDataWithUnequalGroups | 0.010 | 0.002 | 0.013 | |
| plotELBO | 0.324 | 0.038 | 0.362 | |
| plotGroupPenalties | 1.036 | 0.059 | 1.096 | |
| plotPosterior | 0.611 | 0.021 | 0.633 | |
| predict.graper | 2.081 | 0.084 | 2.167 | |
| print.graper | 0.051 | 0.017 | 0.067 | |