Multiple platform build/check report for BioC 3.23 - CHECK results for graper on nebbiolo1

Hostname	OS	Arch (*)	R version	Installed pkgs
nebbiolo1	Linux (Ubuntu 24.04.4 LTS)	x86_64	4.6.0 alpha (2026-04-05 r89794)	4919
kjohnson3	macOS 13.7.7 Ventura	arm64	4.6.0 alpha (2026-04-08 r89818)	4631
Click on any hostname to see more info about the system (e.g. compilers) () as reported by 'uname -p', except on Windows and Mac OS X*

CHECK results for graper on nebbiolo1

To the developers/maintainers of the graper package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results

Summary

Package: graper

Version: 1.27.0

Command: /home/biocbuild/bbs-3.23-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.23-bioc/R/site-library --timings graper_1.27.0.tar.gz

StartedAt: 2026-04-11 00:28:22 -0400 (Sat, 11 Apr 2026)

EndedAt: 2026-04-11 00:29:57 -0400 (Sat, 11 Apr 2026)

EllapsedTime: 95.2 seconds

RetCode: 0

Status: OK

CheckDir: graper.Rcheck

Warnings: 0

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.23-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.23-bioc/R/site-library --timings graper_1.27.0.tar.gz
###
##############################################################################
##############################################################################


* using log directory ‘/home/biocbuild/bbs-3.23-bioc/meat/graper.Rcheck’
* using R version 4.6.0 alpha (2026-04-05 r89794)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    gcc (Ubuntu 13.3.0-6ubuntu2~24.04.1) 13.3.0
    GNU Fortran (Ubuntu 13.3.0-6ubuntu2~24.04.1) 13.3.0
* running under: Ubuntu 24.04.4 LTS
* using session charset: UTF-8
* current time: 2026-04-11 04:28:22 UTC
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.27.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* used C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04.1) 13.3.0’
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... INFO
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
  Running ‘testthat.R’
 OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... OK
* checking PDF version of manual ... OK
* DONE

Status: 1 NOTE
See
  ‘/home/biocbuild/bbs-3.23-bioc/meat/graper.Rcheck/00check.log’
for details.

Installation output

graper.Rcheck/00install.out

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.23-bioc/R/bin/R CMD INSTALL graper
###
##############################################################################
##############################################################################


* installing to library ‘/home/biocbuild/bbs-3.23-bioc/R/site-library’
* installing *source* package ‘graper’ ...
** this is package ‘graper’ version ‘1.27.0’
** using staged installation
** libs
using C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04.1) 13.3.0’
g++ -std=gnu++20 -I"/home/biocbuild/bbs-3.23-bioc/R/include" -DNDEBUG  -I'/home/biocbuild/bbs-3.23-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.23-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.23-bioc/R/site-library/BH/include' -I/usr/local/include    -fpic  -g -O2  -Wall -Werror=format-security  -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++20 -I"/home/biocbuild/bbs-3.23-bioc/R/include" -DNDEBUG  -I'/home/biocbuild/bbs-3.23-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.23-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.23-bioc/R/site-library/BH/include' -I/usr/local/include    -fpic  -g -O2  -Wall -Werror=format-security  -c fit_graper.cpp -o fit_graper.o
g++ -std=gnu++20 -shared -L/home/biocbuild/bbs-3.23-bioc/R/lib -L/usr/local/lib -o graper.so RcppExports.o fit_graper.o -llapack -L/home/biocbuild/bbs-3.23-bioc/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/biocbuild/bbs-3.23-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.23-bioc/R/site-library/00LOCK-graper/00new/graper/libs
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (graper)

Tests output

graper.Rcheck/tests/testthat.Rout


R version 4.6.0 alpha (2026-04-05 r89794)
Copyright (C) 2026 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> library(testthat)
> library(graper)
> 
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-870.218
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-583.594
ELB improved by 286.625

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-524.175
ELB improved by 59.4187

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-481.312
ELB improved by 42.8624

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-460.493
ELB improved by 20.8198

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-452.16
ELB improved by 8.33268

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.578
ELB improved by 4.58171

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.076
ELB improved by 3.50266

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.899
ELB improved by 3.1765

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.814
ELB improved by 3.08466

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.817
ELB improved by 2.99727

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.043
ELB improved by 2.77434

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.674
ELB improved by 2.36852

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.822
ELB improved by 1.85202

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.454
ELB improved by 1.36843

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.432
ELB improved by 1.02149

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.624
ELB improved by 0.808239

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.968
ELB improved by 0.656426

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.446
ELB improved by 0.521417

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.038
ELB improved by 0.40802

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.714
ELB improved by 0.32397

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.448
ELB improved by 0.265982

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.221
ELB improved by 0.227093

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.02
ELB improved by 0.20107

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.837
ELB improved by 0.18362

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.664
ELB improved by 0.172156

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.499
ELB improved by 0.165135

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.338
ELB improved by 0.161614

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.177
ELB improved by 0.161057

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.013
ELB improved by 0.163238

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.845
ELB improved by 0.168134

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.669
ELB improved by 0.175739

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.484
ELB improved by 0.185811

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.286
ELB improved by 0.197621

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.076
ELB improved by 0.209864

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.855
ELB improved by 0.2207

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.628
ELB improved by 0.227722

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.4
ELB improved by 0.228163

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.179
ELB improved by 0.220239

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.974
ELB improved by 0.204871

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.789
ELB improved by 0.185286

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.624
ELB improved by 0.16481

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.479
ELB improved by 0.145498

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.351
ELB improved by 0.128225

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.237
ELB improved by 0.113184

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.137
ELB improved by 0.100253

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.048
ELB improved by 0.0891846

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.968
ELB improved by 0.0797008

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.897
ELB improved by 0.0715412

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.832
ELB improved by 0.0644805

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.774
ELB improved by 0.0583322

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.721
ELB improved by 0.0529451

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.673
ELB improved by 0.0481978

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.629
ELB improved by 0.0439927

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.589
ELB improved by 0.0402509

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.552
ELB improved by 0.0369081

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.518
ELB improved by 0.0339114

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.487
ELB improved by 0.0312166

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.458
ELB improved by 0.0287871

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.431
ELB improved by 0.0265914

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.407
ELB improved by 0.0246028

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.384
ELB improved by 0.0227984

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.363
ELB improved by 0.0211583

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.343
ELB improved by 0.0196652

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.325
ELB improved by 0.0183039

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.308
ELB improved by 0.017061

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.292
ELB improved by 0.0159248

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.277
ELB improved by 0.0148848

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.263
ELB improved by 0.0139319

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.25
ELB improved by 0.0130577

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.238
ELB improved by 0.0122549

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.226
ELB improved by 0.0115169

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.215
ELB improved by 0.0108378

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.205
ELB improved by 0.0102123

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.195
ELB improved by 0.0096355

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-857.257
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-580.1
ELB improved by 277.158

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-519.867
ELB improved by 60.2331

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-480.732
ELB improved by 39.1346

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-463.659
ELB improved by 17.0733

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-457.519
ELB improved by 6.13947

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-454.307
ELB improved by 3.21245

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-451.898
ELB improved by 2.40925

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.766
ELB improved by 2.13181

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.765
ELB improved by 2.00114

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.867
ELB improved by 1.89758

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.082
ELB improved by 1.78544

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.429
ELB improved by 1.6527

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.932
ELB improved by 1.49717

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.609
ELB improved by 1.32316

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.468
ELB improved by 1.14028

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.508
ELB improved by 0.960759

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.712
ELB improved by 0.795537

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.061
ELB improved by 0.651371

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.53
ELB improved by 0.530517

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.098
ELB improved by 0.432132

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.744
ELB improved by 0.353761

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.452
ELB improved by 0.292274

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.208
ELB improved by 0.244422

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434
ELB improved by 0.207206

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.822
ELB improved by 0.178084

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.667
ELB improved by 0.155034

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.531
ELB improved by 0.136515

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.409
ELB improved by 0.121386

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.301
ELB improved by 0.108817

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.202
ELB improved by 0.0982124

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.113
ELB improved by 0.0891433

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.032
ELB improved by 0.0812996

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.958
ELB improved by 0.0744531

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.889
ELB improved by 0.0684327

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.826
ELB improved by 0.0631078

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.768
ELB improved by 0.0583764

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.713
ELB improved by 0.0541575

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.663
ELB improved by 0.0503861

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.616
ELB improved by 0.047009

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.572
ELB improved by 0.0439828

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.531
ELB improved by 0.0412714

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.492
ELB improved by 0.0388448

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.455
ELB improved by 0.0366783

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.421
ELB improved by 0.034751

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.387
ELB improved by 0.0330455

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.356
ELB improved by 0.0315478

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.326
ELB improved by 0.0302461

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.297
ELB improved by 0.0291313

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.268
ELB improved by 0.0281965

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.241
ELB improved by 0.0274371

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.214
ELB improved by 0.0268509

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.188
ELB improved by 0.0264377

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.161
ELB improved by 0.0262004

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.135
ELB improved by 0.0261444

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.109
ELB improved by 0.0262783

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.082
ELB improved by 0.0266147

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.055
ELB improved by 0.0271702

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.027
ELB improved by 0.0279664

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.998
ELB improved by 0.0290311

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.968
ELB improved by 0.0303992

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.936
ELB improved by 0.0321138

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.901
ELB improved by 0.0342288

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.865
ELB improved by 0.0368103

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.825
ELB improved by 0.0399391

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.781
ELB improved by 0.0437139

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.733
ELB improved by 0.0482544

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.679
ELB improved by 0.0537041

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.619
ELB improved by 0.0602341

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.551
ELB improved by 0.0680447

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.473
ELB improved by 0.0773665

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.385
ELB improved by 0.0884572

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.283
ELB improved by 0.101595

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.166
ELB improved by 0.117062

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.031
ELB improved by 0.135127

iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.875
ELB improved by 0.156009

iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.695
ELB improved by 0.179844

iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.489
ELB improved by 0.206639

iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.252
ELB improved by 0.23624

iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.984
ELB improved by 0.268289

iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.682
ELB improved by 0.302185

iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.345
ELB improved by 0.337041

iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.973
ELB improved by 0.371614

iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.569
ELB improved by 0.404249

iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.136
ELB improved by 0.432849

iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.681
ELB improved by 0.454929

iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.214
ELB improved by 0.467757

iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.745
ELB improved by 0.468528

iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.29
ELB improved by 0.454634

iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.866
ELB improved by 0.424495

iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.487
ELB improved by 0.379286

iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.163
ELB improved by 0.32406

iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.896
ELB improved by 0.266199

iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.684
ELB improved by 0.212273

iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.518
ELB improved by 0.166121

iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.389
ELB improved by 0.128862

iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.289
ELB improved by 0.0998632

iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.211
ELB improved by 0.0777319

iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.151
ELB improved by 0.0609653

iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.102
ELB improved by 0.0482565

iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.064
ELB improved by 0.0385819

iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.032
ELB improved by 0.0311856

iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.007
ELB improved by 0.0255369

iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.986
ELB improved by 0.0212965

iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.967
ELB improved by 0.0183143

iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.951
ELB improved by 0.0166791

iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.934
ELB improved by 0.0168484

iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.914
ELB improved by 0.0198691

iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.886
ELB improved by 0.0275459

iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.845
ELB improved by 0.0418553

iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.782
ELB improved by 0.0621208

iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.702
ELB improved by 0.0806996

iteration 113
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.616
ELB improved by 0.0858828

iteration 114
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.541
ELB improved by 0.075031

iteration 115
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.484
ELB improved by 0.05719

iteration 116
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.442
ELB improved by 0.0411556

iteration 117
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.413
ELB improved by 0.029804

iteration 118
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.39
ELB improved by 0.0225839

iteration 119
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.372
ELB improved by 0.018198

iteration 120
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.356
ELB improved by 0.0155774

iteration 121
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.342
ELB improved by 0.0140127

iteration 122
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.329
ELB improved by 0.0130654

iteration 123
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.317
ELB improved by 0.0124684

iteration 124
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.305
ELB improved by 0.0120589

iteration 125
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.293
ELB improved by 0.0117379

iteration 126
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.282
ELB improved by 0.0114496

iteration 127
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.27
ELB improved by 0.0111703

iteration 128
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.259
ELB improved by 0.0109011

iteration 129
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.249
ELB improved by 0.0106625

iteration 130
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.238
ELB improved by 0.010489

iteration 131
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.228
ELB improved by 0.0104253

iteration 132
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.217
ELB improved by 0.0105256

iteration 133
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.206
ELB improved by 0.0108576

iteration 134
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.195
ELB improved by 0.0115134

iteration 135
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.182
ELB improved by 0.0126283

iteration 136
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.168
ELB improved by 0.0144113

iteration 137
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.151
ELB improved by 0.0171905

iteration 138
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.129
ELB improved by 0.0214729

iteration 139
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.101
ELB improved by 0.0279867

iteration 140
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.064
ELB improved by 0.037593

iteration 141
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.013
ELB improved by 0.0507748

iteration 142
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.947
ELB improved by 0.0663577

iteration 143
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.867
ELB improved by 0.0800146

iteration 144
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.781
ELB improved by 0.0851466

iteration 145
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.704
ELB improved by 0.0777473

iteration 146
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.643
ELB improved by 0.0606062

iteration 147
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.602
ELB improved by 0.0411639

iteration 148
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.576
ELB improved by 0.0254411

iteration 149
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.561
ELB improved by 0.0151305

iteration 150
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.552
ELB improved by 0.00916348

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-889.009
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-579.852
ELB improved by 309.157

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-523.053
ELB improved by 56.7995

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-490.174
ELB improved by 32.8793

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-474.828
ELB improved by 15.3454

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-467.718
ELB improved by 7.11025

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-463.166
ELB improved by 4.55148

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-459.115
ELB improved by 4.05112

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-454.955
ELB improved by 4.16

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.448
ELB improved by 4.50738

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.615
ELB improved by 4.83339

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.855
ELB improved by 4.75912

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.808
ELB improved by 4.04769

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.852
ELB improved by 2.95558

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.894
ELB improved by 1.95859

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.621
ELB improved by 1.27284

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.762
ELB improved by 0.858657

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.148
ELB improved by 0.614047

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.684
ELB improved by 0.46357

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.319
ELB improved by 0.365079

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.022
ELB improved by 0.297069

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.774
ELB improved by 0.248328

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.562
ELB improved by 0.212438

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.376
ELB improved by 0.185378

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.212
ELB improved by 0.164498

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.064
ELB improved by 0.148028

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.929
ELB improved by 0.134768

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.805
ELB improved by 0.123898

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.69
ELB improved by 0.114849

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.583
ELB improved by 0.107221

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.482
ELB improved by 0.100728

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.387
ELB improved by 0.0951687

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.297
ELB improved by 0.0904042

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.21
ELB improved by 0.086351

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.127
ELB improved by 0.0829831

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.047
ELB improved by 0.0803483

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.968
ELB improved by 0.0786069

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.89
ELB improved by 0.0781103

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.811
ELB improved by 0.0795426

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.727
ELB improved by 0.0841298

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.633
ELB improved by 0.0937346

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.523
ELB improved by 0.109982

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.392
ELB improved by 0.130564

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.248
ELB improved by 0.144014

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.112
ELB improved by 0.136129

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.002
ELB improved by 0.110287

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.918
ELB improved by 0.084143

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.851
ELB improved by 0.0669478

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.793
ELB improved by 0.0573924

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.741
ELB improved by 0.0520081

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.693
ELB improved by 0.0485648

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.647
ELB improved by 0.0460051

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.603
ELB improved by 0.0438771

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.561
ELB improved by 0.0419889

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.521
ELB improved by 0.0402532

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.482
ELB improved by 0.0386251

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.445
ELB improved by 0.0370778

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.409
ELB improved by 0.0355935

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.375
ELB improved by 0.0341594

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.342
ELB improved by 0.0327665

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.311
ELB improved by 0.0314084

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.281
ELB improved by 0.0300808

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.252
ELB improved by 0.0287812

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.225
ELB improved by 0.0275086

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.198
ELB improved by 0.0262631

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.173
ELB improved by 0.0250456

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.149
ELB improved by 0.0238578

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.127
ELB improved by 0.0227016

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.105
ELB improved by 0.0215792

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.085
ELB improved by 0.0204928

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.065
ELB improved by 0.0194442

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.047
ELB improved by 0.0184354

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.029
ELB improved by 0.0174677

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.013
ELB improved by 0.0165422

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.997
ELB improved by 0.0156595

iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.982
ELB improved by 0.01482

iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.968
ELB improved by 0.0140235

iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.955
ELB improved by 0.0132696

iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.942
ELB improved by 0.0125575

iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.931
ELB improved by 0.0118863

iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.919
ELB improved by 0.0112546

iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.909
ELB improved by 0.010661

iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.899
ELB improved by 0.0101041

iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.889
ELB improved by 0.00958196

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-845.372
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-583.753
ELB improved by 261.62

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-524.349
ELB improved by 59.4038

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-478.278
ELB improved by 46.0703

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-455.329
ELB improved by 22.9494

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.146
ELB improved by 9.18299

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.421
ELB improved by 4.72474

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.059
ELB improved by 3.36202

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.123
ELB improved by 2.93596

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.28
ELB improved by 2.84292

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.414
ELB improved by 2.86605

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.514
ELB improved by 2.90058

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.648
ELB improved by 2.86629

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.96
ELB improved by 2.68768

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.628
ELB improved by 2.33234

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.754
ELB improved by 1.87359

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.322
ELB improved by 1.43166

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.255
ELB improved by 1.06685

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.47
ELB improved by 0.785832

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.888
ELB improved by 0.58163

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.444
ELB improved by 0.444215

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.088
ELB improved by 0.355928

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.791
ELB improved by 0.297075

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.537
ELB improved by 0.253447

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.32
ELB improved by 0.217476

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.134
ELB improved by 0.186157

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.975
ELB improved by 0.158835

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.839
ELB improved by 0.135685

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.722
ELB improved by 0.11675

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.621
ELB improved by 0.101596

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.531
ELB improved by 0.0894766

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.452
ELB improved by 0.0796317

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.38
ELB improved by 0.0714567

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.316
ELB improved by 0.0645267

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.257
ELB improved by 0.058555

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.204
ELB improved by 0.0533463

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.155
ELB improved by 0.0487628

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.11
ELB improved by 0.0447027

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.069
ELB improved by 0.0410878

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.031
ELB improved by 0.037856

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.996
ELB improved by 0.0349567

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.964
ELB improved by 0.032348

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.934
ELB improved by 0.0299947

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.906
ELB improved by 0.0278666

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.88
ELB improved by 0.0259381

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.856
ELB improved by 0.024187

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.834
ELB improved by 0.0225942

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.812
ELB improved by 0.0211428

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.793
ELB improved by 0.0198183

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.774
ELB improved by 0.0186078

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.756
ELB improved by 0.0175

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.74
ELB improved by 0.0164849

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.724
ELB improved by 0.0155536

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.71
ELB improved by 0.0146984

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.696
ELB improved by 0.0139121

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.683
ELB improved by 0.0131886

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.67
ELB improved by 0.0125223

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.658
ELB improved by 0.0119081

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.647
ELB improved by 0.0113416

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.636
ELB improved by 0.0108186

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.626
ELB improved by 0.0103356

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.616
ELB improved by 0.00988924

ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
> 
> proc.time()
   user  system elapsed 
  2.378   0.223   2.588

Example timings

graper.Rcheck/graper-Ex.timings

name	user	system	elapsed
coef.graper	0.051	0.023	0.075
getPIPs	0.051	0.013	0.064
graper	0.085	0.018	0.102
makeExampleData	0.009	0.002	0.010
makeExampleDataWithUnequalGroups	0.011	0.002	0.013
plotELBO	0.328	0.022	0.350
plotGroupPenalties	1.093	0.055	1.149
plotPosterior	0.622	0.022	0.645
predict.graper	2.083	0.057	2.139
print.graper	0.053	0.010	0.062