Britta Velten
| Snapshot Date: 2026-04-17 13:40 -0400 (Fri, 17 Apr 2026) |
| git_url: https://git.bioconductor.org/packages/graper |
| git_branch: devel |
| git_last_commit: 95474d7 |
| git_last_commit_date: 2025-10-29 10:49:21 -0400 (Wed, 29 Oct 2025) |
| Back to Multiple platform build/check report for BioC 3.23: simplified long |
|
This page was generated on 2026-04-18 11:35 -0400 (Sat, 18 Apr 2026).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 24.04.4 LTS) | x86_64 | 4.6.0 alpha (2026-04-05 r89794) | 4957 |
| kjohnson3 | macOS 13.7.7 Ventura | arm64 | 4.6.0 alpha (2026-04-08 r89818) | 4686 |
| kunpeng2 | Linux (openEuler 24.03 LTS) | aarch64 | R Under development (unstable) (2025-02-19 r87757) -- "Unsuffered Consequences" | 4627 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 938/2404 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| graper 1.27.0 (landing page) Britta Velten
| nebbiolo1 | Linux (Ubuntu 24.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||||
| kjohnson3 | macOS 13.7.7 Ventura / arm64 | OK | OK | OK | OK | | ||||||||
| kunpeng2 | Linux (openEuler 24.03 LTS) / aarch64 | OK | OK | OK | ||||||||||
| See other builds for graper in R Universe. | ||||||||||||||
|
To the developers/maintainers of the graper package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: graper |
| Version: 1.27.0 |
| Command: /home/biocbuild/bbs-3.23-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.23-bioc/R/site-library --timings graper_1.27.0.tar.gz |
| StartedAt: 2026-04-18 00:33:13 -0400 (Sat, 18 Apr 2026) |
| EndedAt: 2026-04-18 00:34:47 -0400 (Sat, 18 Apr 2026) |
| EllapsedTime: 94.2 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: graper.Rcheck |
| Warnings: 0 |
##############################################################################
##############################################################################
###
### Running command:
###
### /home/biocbuild/bbs-3.23-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.23-bioc/R/site-library --timings graper_1.27.0.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/home/biocbuild/bbs-3.23-bioc/meat/graper.Rcheck’
* using R version 4.6.0 alpha (2026-04-05 r89794)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
gcc (Ubuntu 13.3.0-6ubuntu2~24.04.1) 13.3.0
GNU Fortran (Ubuntu 13.3.0-6ubuntu2~24.04.1) 13.3.0
* running under: Ubuntu 24.04.4 LTS
* using session charset: UTF-8
* current time: 2026-04-18 04:33:13 UTC
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.27.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* used C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04.1) 13.3.0’
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... INFO
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘testthat.R’
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... OK
* checking PDF version of manual ... OK
* DONE
Status: 1 NOTE
See
‘/home/biocbuild/bbs-3.23-bioc/meat/graper.Rcheck/00check.log’
for details.
graper.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.23-bioc/R/bin/R CMD INSTALL graper ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.23-bioc/R/site-library’ * installing *source* package ‘graper’ ... ** this is package ‘graper’ version ‘1.27.0’ ** using staged installation ** libs using C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04.1) 13.3.0’ g++ -std=gnu++20 -I"/home/biocbuild/bbs-3.23-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.23-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.23-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.23-bioc/R/site-library/BH/include' -I/usr/local/include -fpic -g -O2 -Wall -Werror=format-security -c RcppExports.cpp -o RcppExports.o g++ -std=gnu++20 -I"/home/biocbuild/bbs-3.23-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.23-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.23-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.23-bioc/R/site-library/BH/include' -I/usr/local/include -fpic -g -O2 -Wall -Werror=format-security -c fit_graper.cpp -o fit_graper.o g++ -std=gnu++20 -shared -L/home/biocbuild/bbs-3.23-bioc/R/lib -L/usr/local/lib -o graper.so RcppExports.o fit_graper.o -llapack -L/home/biocbuild/bbs-3.23-bioc/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/biocbuild/bbs-3.23-bioc/R/lib -lR installing to /home/biocbuild/bbs-3.23-bioc/R/site-library/00LOCK-graper/00new/graper/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (graper)
graper.Rcheck/tests/testthat.Rout
R version 4.6.0 alpha (2026-04-05 r89794)
Copyright (C) 2026 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(testthat)
> library(graper)
>
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-896.857
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-592.98
ELB improved by 303.877
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-529.044
ELB improved by 63.9363
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-487.204
ELB improved by 41.8391
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-468.171
ELB improved by 19.0331
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-459.252
ELB improved by 8.91908
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-452.49
ELB improved by 6.76232
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.731
ELB improved by 6.75901
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.531
ELB improved by 7.19966
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.399
ELB improved by 7.13183
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.233
ELB improved by 6.16604
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.568
ELB improved by 4.66539
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.378
ELB improved by 3.19022
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.296
ELB improved by 2.08228
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.898
ELB improved by 1.3978
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.897
ELB improved by 1.00101
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.135
ELB improved by 0.761255
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.532
ELB improved by 0.603272
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.041
ELB improved by 0.491335
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.631
ELB improved by 0.409447
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.282
ELB improved by 0.349203
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.977
ELB improved by 0.305129
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.703
ELB improved by 0.273682
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.451
ELB improved by 0.252774
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.21
ELB improved by 0.240645
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.976
ELB improved by 0.233942
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.749
ELB improved by 0.22692
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.534
ELB improved by 0.215378
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.332
ELB improved by 0.201403
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.142
ELB improved by 0.190215
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.958
ELB improved by 0.184366
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.775
ELB improved by 0.182857
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.592
ELB improved by 0.182588
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.412
ELB improved by 0.180269
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.237
ELB improved by 0.174989
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.068
ELB improved by 0.168907
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.903
ELB improved by 0.164709
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.74
ELB improved by 0.163505
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.575
ELB improved by 0.165239
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.405
ELB improved by 0.169832
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.227
ELB improved by 0.177767
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.037
ELB improved by 0.190093
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.829
ELB improved by 0.207763
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.6
ELB improved by 0.22976
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.349
ELB improved by 0.250718
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.086
ELB improved by 0.262501
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.825
ELB improved by 0.261581
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.573
ELB improved by 0.251709
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.335
ELB improved by 0.238093
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.111
ELB improved by 0.223661
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.902
ELB improved by 0.209673
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.705
ELB improved by 0.196719
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.52
ELB improved by 0.185092
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.345
ELB improved by 0.174882
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.179
ELB improved by 0.166044
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.02
ELB improved by 0.158441
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.869
ELB improved by 0.151881
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.722
ELB improved by 0.146149
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.581
ELB improved by 0.141012
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.445
ELB improved by 0.136234
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.314
ELB improved by 0.131582
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.187
ELB improved by 0.126836
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.065
ELB improved by 0.121798
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.949
ELB improved by 0.116315
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.838
ELB improved by 0.110284
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.735
ELB improved by 0.103672
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.638
ELB improved by 0.0965173
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.549
ELB improved by 0.0889261
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.468
ELB improved by 0.081058
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.395
ELB improved by 0.0731049
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.33
ELB improved by 0.0652673
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.272
ELB improved by 0.057731
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.221
ELB improved by 0.05065
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.177
ELB improved by 0.0441367
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.139
ELB improved by 0.0382588
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.106
ELB improved by 0.0330429
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.077
ELB improved by 0.0284815
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.053
ELB improved by 0.0245412
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.032
ELB improved by 0.0211721
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.013
ELB improved by 0.0183146
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.998
ELB improved by 0.015906
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.984
ELB improved by 0.0138848
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.971
ELB improved by 0.0121933
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.961
ELB improved by 0.0107794
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.951
ELB improved by 0.00959722
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-880.726
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-582.669
ELB improved by 298.057
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-526.015
ELB improved by 56.6546
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-486.064
ELB improved by 39.9505
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-467.863
ELB improved by 18.2007
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-461.433
ELB improved by 6.4306
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-457.733
ELB improved by 3.69999
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-454.627
ELB improved by 3.10553
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-451.616
ELB improved by 3.0112
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.547
ELB improved by 3.069
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.416
ELB improved by 3.13099
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.325
ELB improved by 3.09117
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.448
ELB improved by 2.87655
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.953
ELB improved by 2.495
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.891
ELB improved by 2.06256
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.194
ELB improved by 1.69674
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.787
ELB improved by 1.4075
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.62
ELB improved by 1.16674
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.664
ELB improved by 0.955467
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.92
ELB improved by 0.74432
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.367
ELB improved by 0.553371
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.951
ELB improved by 0.415172
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.623
ELB improved by 0.328571
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.346
ELB improved by 0.27705
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.1
ELB improved by 0.245964
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.874
ELB improved by 0.226282
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.66
ELB improved by 0.213127
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.457
ELB improved by 0.203927
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.259
ELB improved by 0.197272
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.067
ELB improved by 0.192332
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.878
ELB improved by 0.188578
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.693
ELB improved by 0.18564
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.51
ELB improved by 0.183233
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.328
ELB improved by 0.181121
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.149
ELB improved by 0.179102
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.972
ELB improved by 0.176996
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.798
ELB improved by 0.174648
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.626
ELB improved by 0.171928
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.457
ELB improved by 0.168723
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.292
ELB improved by 0.164936
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.132
ELB improved by 0.160499
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.976
ELB improved by 0.155394
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.826
ELB improved by 0.149695
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.683
ELB improved by 0.143585
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.546
ELB improved by 0.137331
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.414
ELB improved by 0.131216
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.289
ELB improved by 0.125468
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.169
ELB improved by 0.120229
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.053
ELB improved by 0.115556
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.942
ELB improved by 0.111454
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.834
ELB improved by 0.1079
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.729
ELB improved by 0.104874
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.626
ELB improved by 0.102373
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.526
ELB improved by 0.100424
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.427
ELB improved by 0.0991032
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.328
ELB improved by 0.098561
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.229
ELB improved by 0.0990643
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.128
ELB improved by 0.101086
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.023
ELB improved by 0.105479
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.909
ELB improved by 0.11384
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.78
ELB improved by 0.129213
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.623
ELB improved by 0.157186
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.417
ELB improved by 0.205622
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.142
ELB improved by 0.274511
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.811
ELB improved by 0.330897
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.479
ELB improved by 0.332109
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.177
ELB improved by 0.302675
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.887
ELB improved by 0.290198
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.574
ELB improved by 0.312202
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.203
ELB improved by 0.371131
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.753
ELB improved by 0.450464
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.248
ELB improved by 0.504575
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.747
ELB improved by 0.50144
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.319
ELB improved by 0.428158
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.031
ELB improved by 0.287744
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.872
ELB improved by 0.158625
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.787
ELB improved by 0.0850082
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.738
ELB improved by 0.0495239
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.706
ELB improved by 0.0320443
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.683
ELB improved by 0.0226981
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.666
ELB improved by 0.0172851
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.652
ELB improved by 0.0139392
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.64
ELB improved by 0.0117529
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.63
ELB improved by 0.0102479
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.621
ELB improved by 0.00915809
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-890.755
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-580.637
ELB improved by 310.118
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-519.145
ELB improved by 61.4918
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-480.081
ELB improved by 39.0642
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-463.23
ELB improved by 16.8516
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-455.576
ELB improved by 7.65364
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-451.229
ELB improved by 4.34727
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.142
ELB improved by 3.08699
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.454
ELB improved by 2.68797
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.849
ELB improved by 2.60468
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.23
ELB improved by 2.61919
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.624
ELB improved by 2.60616
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.15
ELB improved by 2.47359
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.955
ELB improved by 2.19494
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.134
ELB improved by 1.82139
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.697
ELB improved by 1.43629
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.59
ELB improved by 1.10733
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.725
ELB improved by 0.864822
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.021
ELB improved by 0.704011
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.416
ELB improved by 0.604839
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.869
ELB improved by 0.547241
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.352
ELB improved by 0.516882
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.847
ELB improved by 0.50503
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.341
ELB improved by 0.50598
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.826
ELB improved by 0.515518
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.295
ELB improved by 0.530625
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.746
ELB improved by 0.54929
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.176
ELB improved by 0.570219
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.583
ELB improved by 0.592507
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.968
ELB improved by 0.615192
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.331
ELB improved by 0.636673
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.677
ELB improved by 0.654126
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.014
ELB improved by 0.663355
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.354
ELB improved by 0.659511
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.716
ELB improved by 0.638828
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.115
ELB improved by 0.600692
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.566
ELB improved by 0.54868
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.076
ELB improved by 0.489734
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.644
ELB improved by 0.432066
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.261
ELB improved by 0.383315
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.911
ELB improved by 0.350328
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.57
ELB improved by 0.341183
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.2
ELB improved by 0.369415
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.741
ELB improved by 0.459273
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.086
ELB improved by 0.654797
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.057
ELB improved by 1.029
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.63
ELB improved by 1.42709
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.163
ELB improved by 1.4674
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.87
ELB improved by 1.29256
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.823
ELB improved by 1.04704
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.113
ELB improved by 0.710125
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.673
ELB improved by 0.440084
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.384
ELB improved by 0.289117
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.175
ELB improved by 0.208898
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.011
ELB improved by 0.163637
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.875
ELB improved by 0.135849
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.758
ELB improved by 0.117183
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.655
ELB improved by 0.103417
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.562
ELB improved by 0.0922678
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.48
ELB improved by 0.0824241
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.407
ELB improved by 0.0730888
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.343
ELB improved by 0.0638276
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.288
ELB improved by 0.0546095
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.243
ELB improved by 0.0458001
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.205
ELB improved by 0.0379276
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.173
ELB improved by 0.0313614
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.147
ELB improved by 0.0261648
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.125
ELB improved by 0.0221654
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.106
ELB improved by 0.0190996
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.089
ELB improved by 0.0167181
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.074
ELB improved by 0.0148265
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.061
ELB improved by 0.0132876
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.049
ELB improved by 0.0120085
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.038
ELB improved by 0.010927
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.028
ELB improved by 0.0100007
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.019
ELB improved by 0.00919975
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-872.224
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-570.322
ELB improved by 301.902
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-507.887
ELB improved by 62.4355
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-469.016
ELB improved by 38.8705
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-453.614
ELB improved by 15.4024
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.987
ELB improved by 6.62648
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.253
ELB improved by 4.73433
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.852
ELB improved by 4.40154
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.23
ELB improved by 4.62195
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.229
ELB improved by 5.0008
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.072
ELB improved by 5.15646
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.322
ELB improved by 4.75055
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.515
ELB improved by 3.80731
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.807
ELB improved by 2.70763
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.006
ELB improved by 1.80091
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.818
ELB improved by 1.18812
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.007
ELB improved by 0.810886
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.424
ELB improved by 0.583471
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.98
ELB improved by 0.44309
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.628
ELB improved by 0.352279
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.338
ELB improved by 0.290315
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.092
ELB improved by 0.245923
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.879
ELB improved by 0.212854
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.692
ELB improved by 0.187495
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.524
ELB improved by 0.167642
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.372
ELB improved by 0.151878
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.233
ELB improved by 0.139245
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.104
ELB improved by 0.129065
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.983
ELB improved by 0.120847
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.869
ELB improved by 0.11422
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.76
ELB improved by 0.108899
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.655
ELB improved by 0.104661
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.554
ELB improved by 0.10133
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.455
ELB improved by 0.098759
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.358
ELB improved by 0.0968296
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.263
ELB improved by 0.0954409
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.168
ELB improved by 0.0945066
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.074
ELB improved by 0.0939525
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.981
ELB improved by 0.0937136
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.887
ELB improved by 0.0937331
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.793
ELB improved by 0.0939623
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.699
ELB improved by 0.0943597
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.604
ELB improved by 0.094892
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.508
ELB improved by 0.095534
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.412
ELB improved by 0.0962692
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.315
ELB improved by 0.0970896
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.217
ELB improved by 0.0979953
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.118
ELB improved by 0.0989935
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.018
ELB improved by 0.100096
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.916
ELB improved by 0.101317
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.814
ELB improved by 0.102669
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.71
ELB improved by 0.104161
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.604
ELB improved by 0.105792
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.496
ELB improved by 0.107548
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.387
ELB improved by 0.109398
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.275
ELB improved by 0.111289
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.162
ELB improved by 0.113145
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.047
ELB improved by 0.114862
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.931
ELB improved by 0.116314
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.814
ELB improved by 0.117348
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.696
ELB improved by 0.117797
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.579
ELB improved by 0.117489
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.462
ELB improved by 0.116269
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.348
ELB improved by 0.114018
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.238
ELB improved by 0.110681
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.131
ELB improved by 0.106287
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.03
ELB improved by 0.100959
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.935
ELB improved by 0.0949076
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.847
ELB improved by 0.0884063
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.765
ELB improved by 0.0817538
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.69
ELB improved by 0.0752324
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.621
ELB improved by 0.0690711
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.558
ELB improved by 0.0634221
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.499
ELB improved by 0.0583503
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.445
ELB improved by 0.0538389
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.396
ELB improved by 0.0498064
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.349
ELB improved by 0.046135
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.307
ELB improved by 0.0427041
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.267
ELB improved by 0.0394227
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.231
ELB improved by 0.0362509
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.198
ELB improved by 0.0332049
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.167
ELB improved by 0.0303461
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.14
ELB improved by 0.0277635
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.114
ELB improved by 0.0255609
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.09
ELB improved by 0.0238559
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.067
ELB improved by 0.0227976
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.045
ELB improved by 0.0226067
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.021
ELB improved by 0.0236494
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.995
ELB improved by 0.0265679
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.962
ELB improved by 0.0325098
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.919
ELB improved by 0.0435141
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.856
ELB improved by 0.0631159
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.758
ELB improved by 0.0973096
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.601
ELB improved by 0.156833
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.339
ELB improved by 0.262817
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.905
ELB improved by 0.43382
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.343
ELB improved by 0.561618
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.863
ELB improved by 0.479948
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.527
ELB improved by 0.33589
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.276
ELB improved by 0.25098
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.064
ELB improved by 0.212206
iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.878
ELB improved by 0.186583
iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.722
ELB improved by 0.155935
iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.598
ELB improved by 0.123229
iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.502
ELB improved by 0.0959549
iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.426
ELB improved by 0.0759228
iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.365
ELB improved by 0.0618995
iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.312
ELB improved by 0.0523399
iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.266
ELB improved by 0.0459797
iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.224
ELB improved by 0.0418021
iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.186
ELB improved by 0.0389544
iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.149
ELB improved by 0.0367058
iteration 113
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.114
ELB improved by 0.0344786
iteration 114
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.082
ELB improved by 0.0319388
iteration 115
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.053
ELB improved by 0.0290652
iteration 116
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.027
ELB improved by 0.0260919
iteration 117
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.004
ELB improved by 0.0233359
iteration 118
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.983
ELB improved by 0.021031
iteration 119
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.964
ELB improved by 0.0192675
iteration 120
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.946
ELB improved by 0.0180194
iteration 121
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.928
ELB improved by 0.017195
iteration 122
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.912
ELB improved by 0.01667
iteration 123
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.895
ELB improved by 0.016299
iteration 124
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.879
ELB improved by 0.0159201
iteration 125
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.864
ELB improved by 0.0153686
iteration 126
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.85
ELB improved by 0.0145103
iteration 127
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.836
ELB improved by 0.0132879
iteration 128
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.825
ELB improved by 0.0117521
iteration 129
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.815
ELB improved by 0.0100499
iteration 130
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.806
ELB improved by 0.00836691
ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
>
> proc.time()
user system elapsed
2.459 0.214 2.660
graper.Rcheck/graper-Ex.timings
| name | user | system | elapsed | |
| coef.graper | 0.053 | 0.017 | 0.069 | |
| getPIPs | 0.071 | 0.028 | 0.099 | |
| graper | 0.079 | 0.023 | 0.102 | |
| makeExampleData | 0.009 | 0.001 | 0.010 | |
| makeExampleDataWithUnequalGroups | 0.011 | 0.001 | 0.012 | |
| plotELBO | 0.307 | 0.031 | 0.339 | |
| plotGroupPenalties | 0.949 | 0.013 | 0.964 | |
| plotPosterior | 0.664 | 0.008 | 0.672 | |
| predict.graper | 2.064 | 0.083 | 2.149 | |
| print.graper | 0.056 | 0.029 | 0.085 | |