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This page was generated on 2025-11-01 11:32 -0400 (Sat, 01 Nov 2025).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 24.04.3 LTS)x86_64R Under development (unstable) (2025-10-20 r88955) -- "Unsuffered Consequences" 4774
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 267/2321HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
CAGEr 2.17.0  (landing page)
Charles Plessy
Snapshot Date: 2025-10-31 13:40 -0400 (Fri, 31 Oct 2025)
git_url: https://git.bioconductor.org/packages/CAGEr
git_branch: devel
git_last_commit: 0a93a41
git_last_commit_date: 2025-10-29 10:13:45 -0400 (Wed, 29 Oct 2025)
nebbiolo1Linux (Ubuntu 24.04.3 LTS) / x86_64  OK    OK    OK  NO, package depends on 'BSgenome' which is not available


BUILD results for CAGEr on nebbiolo1

To the developers/maintainers of the CAGEr package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/CAGEr.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: CAGEr
Version: 2.17.0
Command: /home/biocbuild/bbs-3.23-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data CAGEr
StartedAt: 2025-10-31 16:51:53 -0400 (Fri, 31 Oct 2025)
EndedAt: 2025-10-31 16:55:10 -0400 (Fri, 31 Oct 2025)
EllapsedTime: 197.2 seconds
RetCode: 0
Status:   OK  
PackageFile: CAGEr_2.17.0.tar.gz
PackageFileSize: 1.969 MiB

Command output

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### Running command:
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###   /home/biocbuild/bbs-3.23-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data CAGEr
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* checking for file ‘CAGEr/DESCRIPTION’ ... OK
* preparing ‘CAGEr’:
* checking DESCRIPTION meta-information ... OK
* installing the package (it is needed to build vignettes)
* creating vignettes ... OK
* checking for LF line-endings in source and make files and shell scripts
* checking for empty or unneeded directories
* building ‘CAGEr_2.17.0.tar.gz’