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INSTALL report for MSstats on tokay2

This page was generated on 2019-10-16 12:28:43 -0400 (Wed, 16 Oct 2019).

Package 1058/1741HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
MSstats 3.16.2
Meena Choi
Snapshot Date: 2019-10-15 17:01:26 -0400 (Tue, 15 Oct 2019)
URL: https://git.bioconductor.org/packages/MSstats
Branch: RELEASE_3_9
Last Commit: fc3245c
Last Changed Date: 2019-08-15 20:22:14 -0400 (Thu, 15 Aug 2019)
malbec2 Linux (Ubuntu 18.04.2 LTS) / x86_64  OK  OK  WARNINGS UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  WARNINGS  OK UNNEEDED, same version exists in internal repository
celaya2 OS X 10.11.6 El Capitan / x86_64  OK  OK  WARNINGS  OK UNNEEDED, same version exists in internal repository

Summary

Package: MSstats
Version: 3.16.2
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/MSstats_3.16.2.tar.gz && rm -rf MSstats.buildbin-libdir && mkdir MSstats.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=MSstats.buildbin-libdir MSstats_3.16.2.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL MSstats_3.16.2.zip && rm MSstats_3.16.2.tar.gz MSstats_3.16.2.zip
StartedAt: 2019-10-15 20:44:08 -0400 (Tue, 15 Oct 2019)
EndedAt: 2019-10-15 20:44:45 -0400 (Tue, 15 Oct 2019)
EllapsedTime: 36.9 seconds
RetCode: 0
Status:  OK  

Command output

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### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/MSstats_3.16.2.tar.gz && rm -rf MSstats.buildbin-libdir && mkdir MSstats.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=MSstats.buildbin-libdir MSstats_3.16.2.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL MSstats_3.16.2.zip && rm MSstats_3.16.2.tar.gz MSstats_3.16.2.zip
###
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install for i386

* installing *source* package 'MSstats' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
Warning: replacing previous import 'MASS::select' by 'dplyr::select' when loading 'MSstats'
** help
*** installing help indices
  converting help for package 'MSstats'
    finding HTML links ... done
    DDARawData                              html  
    DDARawData.Skyline                      html  
    DIARawData                              html  
    DIAUmpiretoMSstatsFormat                html  
    MSstats-package                         html  
    MaxQtoMSstatsFormat                     html  
    OpenMStoMSstatsFormat                   html  
    OpenSWATHtoMSstatsFormat                html  
    PDtoMSstatsFormat                       html  
    ProgenesistoMSstatsFormat               html  
    SRMRawData                              html  
    SkylinetoMSstatsFormat                  html  
    SpectronauttoMSstatsFormat              html  
    SpikeInDataLinear                       html  
    SpikeInDataNonLinear                    html  
    dataProcess                             html  
    dataProcessPlots                        html  
    designSampleSize                        html  
    designSampleSizeClassification          html  
    designSampleSizeClassificationPlots     html  
    designSampleSizePlots                   html  
    groupComparison                         html  
    groupComparisonPlots                    html  
    linear_quantlim                         html  
    modelBasedQCPlots                       html  
    nonlinear_quantlim                      html  
    plot_quantlim                           html  
    quantification                          html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning: replacing previous import 'MASS::select' by 'dplyr::select' when loading 'MSstats'
** testing if installed package can be loaded from final location
Warning: replacing previous import 'MASS::select' by 'dplyr::select' when loading 'MSstats'
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'MSstats' ...
** testing if installed package can be loaded
Warning: replacing previous import 'MASS::select' by 'dplyr::select' when loading 'MSstats'
* MD5 sums
packaged installation of 'MSstats' as MSstats_3.16.2.zip
* DONE (MSstats)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'MSstats' successfully unpacked and MD5 sums checked