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BUILD BIN report for GOexpress on tokay1

This page was generated on 2019-04-13 11:24:20 -0400 (Sat, 13 Apr 2019).

Package 659/1649HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
GOexpress 1.16.1
Kevin Rue-Albrecht
Snapshot Date: 2019-04-12 17:01:30 -0400 (Fri, 12 Apr 2019)
URL: https://git.bioconductor.org/packages/GOexpress
Branch: RELEASE_3_8
Last Commit: a9b01a7
Last Changed Date: 2019-01-04 13:05:38 -0400 (Fri, 04 Jan 2019)
malbec1 Linux (Ubuntu 16.04.6 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64  OK  OK  WARNINGS [ OK ]UNNEEDED, same version exists in internal repository
merida1 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: GOexpress
Version: 1.16.1
Command: rm -rf GOexpress.buildbin-libdir && mkdir GOexpress.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GOexpress.buildbin-libdir GOexpress_1.16.1.tar.gz
StartedAt: 2019-04-13 07:20:25 -0400 (Sat, 13 Apr 2019)
EndedAt: 2019-04-13 07:20:54 -0400 (Sat, 13 Apr 2019)
EllapsedTime: 28.2 seconds
RetCode: 0
Status:  OK  
PackageFile: GOexpress_1.16.1.zip
PackageFileSize: 3.06 MiB

Command output

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###
### Running command:
###
###   rm -rf GOexpress.buildbin-libdir && mkdir GOexpress.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GOexpress.buildbin-libdir GOexpress_1.16.1.tar.gz
###
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install for i386

* installing *source* package 'GOexpress' ...
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'GOexpress'
    finding HTML links ... done
    AlvMac                                  html  
    AlvMac_GOgenes                          html  
    AlvMac_allGO                            html  
    AlvMac_allgenes                         html  
    AlvMac_results                          html  
    AlvMac_results.pVal                     html  
    GO_analyse                              html  
    GOexpress-package                       html  
Rd warning: C:/Users/biocbuild/bbs-3.8-bioc/tmpdir/RtmpyuiLqK/R.INSTALL3ae85b471d42/GOexpress/man/GOexpress-package.Rd:100: file link 'Biobase' in package 'Biobase' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.8-bioc/tmpdir/RtmpyuiLqK/R.INSTALL3ae85b471d42/GOexpress/man/GOexpress-package.Rd:102: file link 'RColorBrewer' in package 'RColorBrewer' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.8-bioc/tmpdir/RtmpyuiLqK/R.INSTALL3ae85b471d42/GOexpress/man/GOexpress-package.Rd:103: file link 'VennDiagram' in package 'VennDiagram' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.8-bioc/tmpdir/RtmpyuiLqK/R.INSTALL3ae85b471d42/GOexpress/man/GOexpress-package.Rd:109: file link 'bluered' in package 'gplots' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.8-bioc/tmpdir/RtmpyuiLqK/R.INSTALL3ae85b471d42/GOexpress/man/GOexpress-package.Rd:110: file link 'greenred' in package 'gplots' does not exist and so has been treated as a topic
    cluster_GO                              html  
    expression_plot                         html  
Rd warning: C:/Users/biocbuild/bbs-3.8-bioc/tmpdir/RtmpyuiLqK/R.INSTALL3ae85b471d42/GOexpress/man/expression_plot.Rd:140: file link 'Biobase' in package 'Biobase' does not exist and so has been treated as a topic
    expression_plot_symbol                  html  
Rd warning: C:/Users/biocbuild/bbs-3.8-bioc/tmpdir/RtmpyuiLqK/R.INSTALL3ae85b471d42/GOexpress/man/expression_plot_symbol.Rd:152: file link 'Biobase' in package 'Biobase' does not exist and so has been treated as a topic
    expression_profiles                     html  
Rd warning: C:/Users/biocbuild/bbs-3.8-bioc/tmpdir/RtmpyuiLqK/R.INSTALL3ae85b471d42/GOexpress/man/expression_profiles.Rd:154: file link 'Biobase' in package 'Biobase' does not exist and so has been treated as a topic
    expression_profiles_symbol              html  
Rd warning: C:/Users/biocbuild/bbs-3.8-bioc/tmpdir/RtmpyuiLqK/R.INSTALL3ae85b471d42/GOexpress/man/expression_profiles_symbol.Rd:161: file link 'Biobase' in package 'Biobase' does not exist and so has been treated as a topic
    heatmap_GO                              html  
Rd warning: C:/Users/biocbuild/bbs-3.8-bioc/tmpdir/RtmpyuiLqK/R.INSTALL3ae85b471d42/GOexpress/man/heatmap_GO.Rd:139: file link 'brewer.pal.info' in package 'RColorBrewer' does not exist and so has been treated as a topic
    hist_scores                             html  
    list_genes                              html  
    microarray2dataset                      html  
    pValue_GO                               html  
    plot_design                             html  
    prefix2dataset                          html  
    quantiles_scores                        html  
    rerank                                  html  
    subEset                                 html  
Rd warning: C:/Users/biocbuild/bbs-3.8-bioc/tmpdir/RtmpyuiLqK/R.INSTALL3ae85b471d42/GOexpress/man/subEset.Rd:46: file link 'ExpressionSet' in package 'Biobase' does not exist and so has been treated as a topic
    subset_scores                           html  
    table_genes                             html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL

install for x64

* installing *source* package 'GOexpress' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'GOexpress' as GOexpress_1.16.1.zip
* DONE (GOexpress)
In R CMD INSTALL
In R CMD INSTALL