Irina Ostrovnaya
| Snapshot Date: 2019-04-12 17:01:30 -0400 (Fri, 12 Apr 2019) |
| URL: https://git.bioconductor.org/packages/Clonality |
| Branch: RELEASE_3_8 |
| Last Commit: 7ae80f0 |
| Last Changed Date: 2018-10-30 11:41:47 -0400 (Tue, 30 Oct 2018) |
| Back to Multiple platform build/check report for BioC 3.8 |
|
This page was generated on 2019-04-13 11:21:29 -0400 (Sat, 13 Apr 2019).
| Package 272/1649 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| Clonality 1.30.0 Irina Ostrovnaya
| malbec1 | Linux (Ubuntu 16.04.6 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | OK | | ||||||
| merida1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: Clonality |
| Version: 1.30.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/Clonality_1.30.0.tar.gz && rm -rf Clonality.buildbin-libdir && mkdir Clonality.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=Clonality.buildbin-libdir Clonality_1.30.0.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL Clonality_1.30.0.zip && rm Clonality_1.30.0.tar.gz Clonality_1.30.0.zip |
| StartedAt: 2019-04-12 18:37:18 -0400 (Fri, 12 Apr 2019) |
| EndedAt: 2019-04-12 18:38:02 -0400 (Fri, 12 Apr 2019) |
| EllapsedTime: 43.9 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/Clonality_1.30.0.tar.gz && rm -rf Clonality.buildbin-libdir && mkdir Clonality.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=Clonality.buildbin-libdir Clonality_1.30.0.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL Clonality_1.30.0.zip && rm Clonality_1.30.0.tar.gz Clonality_1.30.0.zip
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install for i386
* installing *source* package 'Clonality' ...
** R
** data
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'Clonality'
finding HTML links ... done
Clonality-internal html
Clonality-package html
ECMtesting html
LOHclonality html
LRtesting3or4tumors html
SNVtest html
ave.adj.probes html
chromosomePlots html
clonality.analysis html
genomewidePlots html
grid.lik html
histogramPlot html
lcis html
model.lik html
mutation.proba html
mutation.rem html
print.mutation.proba html
print.mutation.rem html
splitChromosomes html
xidens html
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL
install for x64
* installing *source* package 'Clonality' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'Clonality' as Clonality_1.30.0.zip
* DONE (Clonality)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.8-bioc/R/library'
package 'Clonality' successfully unpacked and MD5 sums checked
In R CMD INSTALL