Package: recount

Version: 1.6.3

Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/recount_1.6.3.tar.gz && rm -rf recount.buildbin-libdir && mkdir recount.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=recount.buildbin-libdir recount_1.6.3.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL recount_1.6.3.zip && rm recount_1.6.3.tar.gz recount_1.6.3.zip

StartedAt: 2018-10-16 20:36:25 -0400 (Tue, 16 Oct 2018)

EndedAt: 2018-10-16 20:37:44 -0400 (Tue, 16 Oct 2018)

EllapsedTime: 79.3 seconds

RetCode: 0

Status:  OK

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### Running command:
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###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/recount_1.6.3.tar.gz && rm -rf recount.buildbin-libdir && mkdir recount.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=recount.buildbin-libdir recount_1.6.3.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL recount_1.6.3.zip && rm recount_1.6.3.tar.gz recount_1.6.3.zip
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install for i386

* installing *source* package 'recount' ...
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
No methods found in package 'IRanges' for request: 'subset' when loading 'derfinder'
** help
*** installing help indices
  converting help for package 'recount'
    finding HTML links ... done
    abstract_search                         html  
    add_metadata                            html  
    add_predictions                         html  
    all_metadata                            html  
    browse_study                            html  
    coverage_matrix                         html  
    download_study                          html  
    expressed_regions                       html  
    find_geo                                html  
    geo_characteristics                     html  
    geo_info                                html  
    getRPKM                                 html  
    read_counts                             html  
    recount-package                         html  
    recount_abstract                        html  
    recount_exons                           html  
    recount_genes                           html  
    recount_url                             html  
    reproduce_ranges                        html  
    rse_gene_SRP009615                      html  
    scale_counts                            html  
    snaptron_query                          html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
No methods found in package 'IRanges' for request: 'subset' when loading 'derfinder'
In R CMD INSTALL

install for x64

* installing *source* package 'recount' ...
** testing if installed package can be loaded
No methods found in package 'IRanges' for request: 'subset' when loading 'derfinder'
* MD5 sums
packaged installation of 'recount' as recount_1.6.3.zip
* DONE (recount)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.7-bioc/R/library'
package 'recount' successfully unpacked and MD5 sums checked
In R CMD INSTALL