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INSTALL report for eegc on tokay2

This page was generated on 2018-10-17 08:42:47 -0400 (Wed, 17 Oct 2018).

Package 435/1561HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
eegc 1.6.1
Xiaoyuan Zhou
Snapshot Date: 2018-10-15 16:45:08 -0400 (Mon, 15 Oct 2018)
URL: https://git.bioconductor.org/packages/eegc
Branch: RELEASE_3_7
Last Commit: 2e661ec
Last Changed Date: 2018-05-17 13:00:28 -0400 (Thu, 17 May 2018)
malbec2 Linux (Ubuntu 16.04.1 LTS) / x86_64  OK  OK  WARNINGS UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  TIMEOUT  OK 
merida2 OS X 10.11.6 El Capitan / x86_64  OK  OK  WARNINGS  OK UNNEEDED, same version exists in internal repository

Summary

Package: eegc
Version: 1.6.1
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/eegc_1.6.1.tar.gz && rm -rf eegc.buildbin-libdir && mkdir eegc.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=eegc.buildbin-libdir eegc_1.6.1.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL eegc_1.6.1.zip && rm eegc_1.6.1.tar.gz eegc_1.6.1.zip
StartedAt: 2018-10-16 20:34:44 -0400 (Tue, 16 Oct 2018)
EndedAt: 2018-10-16 20:36:09 -0400 (Tue, 16 Oct 2018)
EllapsedTime: 85.3 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/eegc_1.6.1.tar.gz && rm -rf eegc.buildbin-libdir && mkdir eegc.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=eegc.buildbin-libdir eegc_1.6.1.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL eegc_1.6.1.zip && rm eegc_1.6.1.tar.gz eegc_1.6.1.zip
###
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100 9085k  100 9085k    0     0  55.4M      0 --:--:-- --:--:-- --:--:-- 57.9M

install for i386

* installing *source* package 'eegc' ...
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'eegc'
    finding HTML links ... done
    SandlerFPKM                             html  
    barplotEnrich                           html  
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpKaPcNJ/R.INSTALL17c862006f62/eegc/man/barplotEnrich.Rd:29: missing file link 'barplot.enrichResult'
    cate.gene                               html  
    cate.ratio                              html  
    categorizeGene                          html  
    densityPlot                             html  
    diffGene                                html  
    diffgene.genes                          html  
    dotPercentage                           html  
    eegc                                    html  
    enrichment                              html  
    expr.filter                             html  
    functionEnrich                          html  
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpKaPcNJ/R.INSTALL17c862006f62/eegc/man/functionEnrich.Rd:17: file link 'org.Hs.eg.db' in package 'org.Hs.eg.db' does not exist and so has been treated as a topic
    goenrich                                html  
    grnPlot                                 html  
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpKaPcNJ/R.INSTALL17c862006f62/eegc/man/grnPlot.Rd:33: file link 'igraph.plotting' in package 'igraph' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpKaPcNJ/R.INSTALL17c862006f62/eegc/man/grnPlot.Rd:36: file link 'igraph.plotting' in package 'igraph' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpKaPcNJ/R.INSTALL17c862006f62/eegc/man/grnPlot.Rd:38: file link 'layout' in package 'igraph' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpKaPcNJ/R.INSTALL17c862006f62/eegc/man/grnPlot.Rd:42: file link 'igraph.plotting' in package 'igraph' does not exist and so has been treated as a topic
    heatmapPlot                             html  
    human.gene                              html  
    human.grn                               html  
    human.tf                                html  
    markerScatter                           html  
    markers                                 html  
    mouse.gene                              html  
    mouse.grn                               html  
    mouse.tf                                html  
    networkAnalyze                          html  
    tissueGenes                             html  
    tissueGroup                             html  
** building package indices
** installing vignettes
   'eegc.Rnw' 
** testing if installed package can be loaded
In R CMD INSTALL

install for x64

* installing *source* package 'eegc' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'eegc' as eegc_1.6.1.zip
* DONE (eegc)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.7-bioc/R/library'
package 'eegc' successfully unpacked and MD5 sums checked
In R CMD INSTALL