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BioC 3.4: BUILD BIN report for SeqVarTools on moscato1

This page was generated on 2016-09-21 03:45:02 -0700 (Wed, 21 Sep 2016).

Package 1103/1257HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
SeqVarTools 1.11.4
Stephanie M. Gogarten , Xiuwen Zheng , Adrienne Stilp
Snapshot Date: 2016-09-19 19:15:14 -0700 (Mon, 19 Sep 2016)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/SeqVarTools
Last Changed Rev: 120026 / Revision: 121152
Last Changed Date: 2016-08-10 12:31:30 -0700 (Wed, 10 Aug 2016)
zin1 Linux (Ubuntu 16.04 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
moscato1 Windows Server 2008 R2 Standard (64-bit) / x64  OK  OK  OK [ OK ]UNNEEDED, same version exists in internal repository
morelia Mac OS X Mavericks (10.9.5) / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: SeqVarTools
Version: 1.11.4
Command: cd SeqVarTools.buildbin-libdir/SeqVarTools && zip -r ../../SeqVarTools_1.11.4.zip . & cd ../..
StartedAt: 2016-09-20 19:33:31 -0700 (Tue, 20 Sep 2016)
EndedAt: 2016-09-20 19:33:45 -0700 (Tue, 20 Sep 2016)
EllapsedTime: 13.7 seconds
RetCode: 0
Status:  OK  
PackageFile: SeqVarTools_1.11.4.zip
PackageFileSize: 1.337 MiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   cd SeqVarTools.buildbin-libdir/SeqVarTools && zip -r ../../SeqVarTools_1.11.4.zip . & cd ../..
###
##############################################################################
##############################################################################


  adding: data/ (208 bytes security) (stored 0%)
  adding: data/Rdata.rdb (188 bytes security) (stored 0%)
  adding: data/Rdata.rds (188 bytes security) (stored 0%)
  adding: data/Rdata.rdx (188 bytes security) (stored 0%)
  adding: DESCRIPTION (188 bytes security) (deflated 43%)
  adding: doc/ (208 bytes security) (stored 0%)
  adding: doc/index.html (188 bytes security) (deflated 59%)
  adding: doc/SeqVarTools.pdf (188 bytes security) (deflated 23%)
  adding: doc/SeqVarTools.R (188 bytes security) (deflated 79%)
  adding: doc/SeqVarTools.Rnw (188 bytes security) (deflated 62%)
  adding: extdata/ (208 bytes security) (stored 0%)
  adding: extdata/gl_chr1.gds (188 bytes security) (deflated 56%)
  adding: extdata/gl_chr1.vcf (188 bytes security) (deflated 80%)
  adding: extdata/hapmap_annotation.txt (188 bytes security) (deflated 63%)
  adding: extdata/hapmap_annotation_DD.txt (188 bytes security) (deflated 40%)
  adding: extdata/hapmap_exome_chr22.gds (188 bytes security) (deflated 7%)
  adding: help/ (208 bytes security) (stored 0%)
  adding: help/aliases.rds (188 bytes security) (stored 0%)
  adding: help/AnIndex (188 bytes security) (deflated 81%)
  adding: help/paths.rds (188 bytes security) (stored 0%)
  adding: help/SeqVarTools.rdb (188 bytes security) (deflated 1%)
  adding: help/SeqVarTools.rdx (188 bytes security) (stored 0%)
  adding: html/ (208 bytes security) (stored 0%)
  adding: html/00Index.html (188 bytes security) (deflated 85%)
  adding: html/R.css (188 bytes security) (deflated 75%)
  adding: INDEX (188 bytes security) (deflated 57%)
  adding: MD5 (188 bytes security) (deflated 47%)
  adding: Meta/ (208 bytes security) (stored 0%)
  adding: Meta/data.rds (188 bytes security) (stored 0%)
  adding: Meta/hsearch.rds (188 bytes security) (stored 0%)
  adding: Meta/links.rds (188 bytes security) (stored 0%)
  adding: Meta/nsInfo.rds (188 bytes security) (stored 0%)
  adding: Meta/package.rds (188 bytes security) (stored 0%)
  adding: Meta/Rd.rds (188 bytes security) (stored 0%)
  adding: Meta/vignette.rds (188 bytes security) (stored 0%)
  adding: NAMESPACE (188 bytes security) (deflated 63%)
  adding: NEWS.Rd (188 bytes security) (deflated 68%)
  adding: R/ (208 bytes security) (stored 0%)
  adding: R/SeqVarTools (188 bytes security) (deflated 41%)
  adding: R/SeqVarTools.rdb (188 bytes security) (deflated 44%)
  adding: R/SeqVarTools.rdx (188 bytes security) (deflated 1%)
  adding: unitTests/ (208 bytes security) (stored 0%)
  adding: unitTests/test_alleleFrequency.R (188 bytes security) (deflated 60%)
  adding: unitTests/test_alleles.R (188 bytes security) (deflated 77%)
  adding: unitTests/test_alternateAlleleDetection.R (188 bytes security) (deflated 75%)
  adding: unitTests/test_applyMethod.R (188 bytes security) (deflated 81%)
  adding: unitTests/test_countSingletons.R (188 bytes security) (deflated 39%)
  adding: unitTests/test_duplicateDiscordance.R (188 bytes security) (deflated 82%)
  adding: unitTests/test_getData.R (188 bytes security) (deflated 81%)
  adding: unitTests/test_hethom.R (188 bytes security) (deflated 86%)
  adding: unitTests/test_hwe.R (188 bytes security) (deflated 63%)
  adding: unitTests/test_inbreedCoeff.R (188 bytes security) (deflated 61%)
  adding: unitTests/test_meanBySample.R (188 bytes security) (deflated 58%)
  adding: unitTests/test_mendelErr.R (188 bytes security) (deflated 81%)
  adding: unitTests/test_missingGenotypeRate.R (188 bytes security) (deflated 69%)
  adding: unitTests/test_pca.R (188 bytes security) (deflated 54%)
  adding: unitTests/test_refFrac.R (188 bytes security) (deflated 49%)
  adding: unitTests/test_regression.R (188 bytes security) (deflated 82%)
  adding: unitTests/test_SeqVarData.R (188 bytes security) (deflated 80%)
  adding: unitTests/test_setVariantID.R (188 bytes security) (deflated 60%)
  adding: unitTests/test_titv.R (188 bytes security) (deflated 71%)
  adding: unitTests/test_utils.R (188 bytes security) (deflated 77%)
  adding: unitTests/test_VariableLength.R (188 bytes security) (deflated 73%)