Britta Velten
| Snapshot Date: 2025-11-13 13:40 -0500 (Thu, 13 Nov 2025) |
| git_url: https://git.bioconductor.org/packages/graper |
| git_branch: devel |
| git_last_commit: 95474d7 |
| git_last_commit_date: 2025-10-29 10:49:21 -0500 (Wed, 29 Oct 2025) |
| Back to Multiple platform build/check report for BioC 3.23: simplified long |
|
This page was generated on 2025-11-14 11:36 -0500 (Fri, 14 Nov 2025).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) | x86_64 | R Under development (unstable) (2025-10-20 r88955) -- "Unsuffered Consequences" | 4825 |
| kjohnson3 | macOS 13.7.7 Ventura | arm64 | R Under development (unstable) (2025-11-04 r88984) -- "Unsuffered Consequences" | 4547 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 911/2325 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| graper 1.27.0 (landing page) Britta Velten
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | | ||||||||
| kjohnson3 | macOS 13.7.7 Ventura / arm64 | OK | OK | OK | OK | | ||||||||
|
To the developers/maintainers of the graper package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: graper |
| Version: 1.27.0 |
| Command: /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:graper.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings graper_1.27.0.tar.gz |
| StartedAt: 2025-11-13 20:19:24 -0500 (Thu, 13 Nov 2025) |
| EndedAt: 2025-11-13 20:19:55 -0500 (Thu, 13 Nov 2025) |
| EllapsedTime: 31.3 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: graper.Rcheck |
| Warnings: 0 |
##############################################################################
##############################################################################
###
### Running command:
###
### /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:graper.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings graper_1.27.0.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/Users/biocbuild/bbs-3.23-bioc/meat/graper.Rcheck’
* using R Under development (unstable) (2025-11-04 r88984)
* using platform: aarch64-apple-darwin20
* R was compiled by
Apple clang version 16.0.0 (clang-1600.0.26.6)
GNU Fortran (GCC) 14.2.0
* running under: macOS Ventura 13.7.8
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.27.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* used C++ compiler: ‘Apple clang version 15.0.0 (clang-1500.1.0.2.5)’
* used SDK: ‘MacOSX11.3.1.sdk’
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... INFO
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘testthat.R’
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE
Status: 1 NOTE
See
‘/Users/biocbuild/bbs-3.23-bioc/meat/graper.Rcheck/00check.log’
for details.
graper.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL graper ### ############################################################################## ############################################################################## * installing to library ‘/Library/Frameworks/R.framework/Versions/4.6-arm64/Resources/library’ * installing *source* package ‘graper’ ... ** this is package ‘graper’ version ‘1.27.0’ ** using staged installation ** libs using C++ compiler: ‘Apple clang version 15.0.0 (clang-1500.1.0.2.5)’ using SDK: ‘MacOSX11.3.1.sdk’ clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Library/Frameworks/R.framework/Versions/4.6-arm64/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.6-arm64/Resources/library/RcppArmadillo/include' -I'/Library/Frameworks/R.framework/Versions/4.6-arm64/Resources/library/BH/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Library/Frameworks/R.framework/Versions/4.6-arm64/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.6-arm64/Resources/library/RcppArmadillo/include' -I'/Library/Frameworks/R.framework/Versions/4.6-arm64/Resources/library/BH/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c fit_graper.cpp -o fit_graper.o clang++ -arch arm64 -std=gnu++17 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/arm64/lib -o graper.so RcppExports.o fit_graper.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/opt/gfortran/lib/gcc/aarch64-apple-darwin20.0/14.2.0 -L/opt/gfortran/lib -lemutls_w -lheapt_w -lgfortran -lquadmath -F/Library/Frameworks/R.framework/.. -framework R installing to /Library/Frameworks/R.framework/Versions/4.6-arm64/Resources/library/00LOCK-graper/00new/graper/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (graper)
graper.Rcheck/tests/testthat.Rout
R Under development (unstable) (2025-11-04 r88984) -- "Unsuffered Consequences"
Copyright (C) 2025 The R Foundation for Statistical Computing
Platform: aarch64-apple-darwin20
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(testthat)
> library(graper)
>
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-827.714
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-584.252
ELB improved by 243.461
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-525.03
ELB improved by 59.2225
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-480.27
ELB improved by 44.76
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-457.404
ELB improved by 22.8654
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.387
ELB improved by 9.01743
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.104
ELB improved by 4.28315
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.044
ELB improved by 3.06006
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.277
ELB improved by 2.76712
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.527
ELB improved by 2.74977
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.753
ELB improved by 2.7735
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.062
ELB improved by 2.69179
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.64
ELB improved by 2.42156
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.643
ELB improved by 1.99713
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.094
ELB improved by 1.54883
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.908
ELB improved by 1.18578
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.981
ELB improved by 0.926985
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.241
ELB improved by 0.740549
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.636
ELB improved by 0.604322
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.124
ELB improved by 0.512408
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.668
ELB improved by 0.455685
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.247
ELB improved by 0.421027
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.849
ELB improved by 0.397984
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.469
ELB improved by 0.380427
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.104
ELB improved by 0.365393
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.752
ELB improved by 0.351771
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.412
ELB improved by 0.339403
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.084
ELB improved by 0.328518
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.764
ELB improved by 0.319396
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.452
ELB improved by 0.312191
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.145
ELB improved by 0.306854
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.842
ELB improved by 0.303137
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.542
ELB improved by 0.300618
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.243
ELB improved by 0.298758
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.946
ELB improved by 0.296966
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.651
ELB improved by 0.294672
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.36
ELB improved by 0.291395
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.073
ELB improved by 0.286815
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.792
ELB improved by 0.280816
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.519
ELB improved by 0.273526
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.253
ELB improved by 0.265367
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.996
ELB improved by 0.257165
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.746
ELB improved by 0.2504
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.498
ELB improved by 0.247621
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.246
ELB improved by 0.252589
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.978
ELB improved by 0.26748
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.696
ELB improved by 0.281656
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.431
ELB improved by 0.265366
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.221
ELB improved by 0.210024
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.072
ELB improved by 0.149228
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.966
ELB improved by 0.105545
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.889
ELB improved by 0.0775972
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.829
ELB improved by 0.0593511
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.782
ELB improved by 0.0469372
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.744
ELB improved by 0.0382585
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.712
ELB improved by 0.0320994
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.684
ELB improved by 0.0276894
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.66
ELB improved by 0.0245152
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.638
ELB improved by 0.0222296
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.617
ELB improved by 0.0205981
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.597
ELB improved by 0.0194654
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.579
ELB improved by 0.0187333
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.56
ELB improved by 0.0183474
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.542
ELB improved by 0.0182908
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.524
ELB improved by 0.0185836
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.504
ELB improved by 0.0192906
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.484
ELB improved by 0.020539
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.461
ELB improved by 0.0225504
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.435
ELB improved by 0.0256922
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.405
ELB improved by 0.0305354
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.367
ELB improved by 0.0378484
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.319
ELB improved by 0.0482729
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.258
ELB improved by 0.061198
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.185
ELB improved by 0.0729703
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.107
ELB improved by 0.077504
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.035
ELB improved by 0.0723738
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.972
ELB improved by 0.0626783
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.917
ELB improved by 0.0552888
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.863
ELB improved by 0.0534318
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.806
ELB improved by 0.0576123
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.738
ELB improved by 0.0677722
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.655
ELB improved by 0.083387
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.553
ELB improved by 0.101507
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.438
ELB improved by 0.115055
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.321
ELB improved by 0.116818
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.213
ELB improved by 0.107997
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.116
ELB improved by 0.0975761
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.023
ELB improved by 0.0921574
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.933
ELB improved by 0.090447
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.847
ELB improved by 0.0855332
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.775
ELB improved by 0.0722918
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.722
ELB improved by 0.0535112
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.686
ELB improved by 0.0360409
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.662
ELB improved by 0.0236121
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.646
ELB improved by 0.0160034
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.634
ELB improved by 0.011623
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.625
ELB improved by 0.00909487
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-855.633
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-580.178
ELB improved by 275.455
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-520.342
ELB improved by 59.8364
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-474.584
ELB improved by 45.7579
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-452.242
ELB improved by 22.342
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.074
ELB improved by 8.16803
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.036
ELB improved by 4.0385
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.16
ELB improved by 2.87514
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.743
ELB improved by 2.41773
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.499
ELB improved by 2.24336
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.333
ELB improved by 2.16593
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.222
ELB improved by 2.11138
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.174
ELB improved by 2.04775
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.22
ELB improved by 1.95391
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.408
ELB improved by 1.81212
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.794
ELB improved by 1.61452
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.422
ELB improved by 1.37213
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.308
ELB improved by 1.11355
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.436
ELB improved by 0.872045
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.766
ELB improved by 0.670109
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.252
ELB improved by 0.513444
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.856
ELB improved by 0.396731
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.544
ELB improved by 0.311469
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.295
ELB improved by 0.249742
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.089
ELB improved by 0.205036
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.917
ELB improved by 0.172282
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.769
ELB improved by 0.147754
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.641
ELB improved by 0.12886
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.527
ELB improved by 0.113869
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.425
ELB improved by 0.101649
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.334
ELB improved by 0.0914575
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.251
ELB improved by 0.0828049
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.175
ELB improved by 0.0753568
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.107
ELB improved by 0.0688776
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.043
ELB improved by 0.0631954
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.985
ELB improved by 0.0581799
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.931
ELB improved by 0.0537296
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.882
ELB improved by 0.0497634
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.835
ELB improved by 0.0462149
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.792
ELB improved by 0.0430295
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.752
ELB improved by 0.040161
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.715
ELB improved by 0.0375708
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.68
ELB improved by 0.0352256
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.646
ELB improved by 0.033097
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.615
ELB improved by 0.0311604
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.586
ELB improved by 0.0293947
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.558
ELB improved by 0.0277812
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.532
ELB improved by 0.0263039
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.507
ELB improved by 0.0249484
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.483
ELB improved by 0.0237024
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.461
ELB improved by 0.0225547
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.439
ELB improved by 0.0214956
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.419
ELB improved by 0.0205164
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.399
ELB improved by 0.0196094
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.38
ELB improved by 0.0187677
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.362
ELB improved by 0.0179852
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.345
ELB improved by 0.0172563
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.328
ELB improved by 0.0165762
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.312
ELB improved by 0.0159404
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.297
ELB improved by 0.0153448
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.282
ELB improved by 0.014786
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.268
ELB improved by 0.0142607
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.254
ELB improved by 0.013766
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.241
ELB improved by 0.0132993
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.228
ELB improved by 0.0128582
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.216
ELB improved by 0.0124405
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.204
ELB improved by 0.0120445
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.192
ELB improved by 0.0116682
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.181
ELB improved by 0.0113103
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.17
ELB improved by 0.0109692
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.159
ELB improved by 0.0106437
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.149
ELB improved by 0.0103327
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.139
ELB improved by 0.0100351
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.129
ELB improved by 0.00974998
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-892.389
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-563.484
ELB improved by 328.904
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-505.513
ELB improved by 57.971
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-478.135
ELB improved by 27.3785
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-467.22
ELB improved by 10.9146
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-461.193
ELB improved by 6.02683
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-456.724
ELB improved by 4.46947
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-452.825
ELB improved by 3.89882
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.19
ELB improved by 3.6348
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.729
ELB improved by 3.46142
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.462
ELB improved by 3.26705
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.493
ELB improved by 2.96933
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.96
ELB improved by 2.53261
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.949
ELB improved by 2.01129
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.428
ELB improved by 1.52093
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.282
ELB improved by 1.14551
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.387
ELB improved by 0.894841
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.657
ELB improved by 0.730565
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.048
ELB improved by 0.608515
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.54
ELB improved by 0.508272
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.111
ELB improved by 0.429124
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.742
ELB improved by 0.36935
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.42
ELB improved by 0.32132
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.142
ELB improved by 0.278141
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.904
ELB improved by 0.237816
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.703
ELB improved by 0.201679
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.531
ELB improved by 0.171214
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.385
ELB improved by 0.146761
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.257
ELB improved by 0.127758
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.144
ELB improved by 0.113271
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.041
ELB improved by 0.102347
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.947
ELB improved by 0.0941764
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.859
ELB improved by 0.0881336
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.775
ELB improved by 0.0837612
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.694
ELB improved by 0.0807377
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.616
ELB improved by 0.0788448
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.538
ELB improved by 0.0779405
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.46
ELB improved by 0.0779407
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.381
ELB improved by 0.0788059
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.3
ELB improved by 0.0805326
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.217
ELB improved by 0.0831489
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.13
ELB improved by 0.0867115
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.039
ELB improved by 0.0913046
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.942
ELB improved by 0.0970409
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.838
ELB improved by 0.104062
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.726
ELB improved by 0.112543
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.603
ELB improved by 0.12269
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.468
ELB improved by 0.134748
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.319
ELB improved by 0.149002
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.153
ELB improved by 0.165771
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.968
ELB improved by 0.185409
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.76
ELB improved by 0.208285
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.525
ELB improved by 0.234746
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.26
ELB improved by 0.265064
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.96
ELB improved by 0.299338
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.623
ELB improved by 0.337361
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.245
ELB improved by 0.378429
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.824
ELB improved by 0.42112
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.36
ELB improved by 0.46307
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.86
ELB improved by 0.500895
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.329
ELB improved by 0.530482
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.781
ELB improved by 0.547856
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.231
ELB improved by 0.550477
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.692
ELB improved by 0.538298
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.179
ELB improved by 0.513679
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.698
ELB improved by 0.480356
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.256
ELB improved by 0.442917
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.849
ELB improved by 0.40654
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.476
ELB improved by 0.373435
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.138
ELB improved by 0.337564
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.849
ELB improved by 0.289395
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.618
ELB improved by 0.230435
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.445
ELB improved by 0.173235
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.318
ELB improved by 0.127174
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.224
ELB improved by 0.0936523
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.154
ELB improved by 0.0701843
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.1
ELB improved by 0.0538203
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.058
ELB improved by 0.0422581
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.024
ELB improved by 0.0339193
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.996
ELB improved by 0.0277689
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.973
ELB improved by 0.023133
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.953
ELB improved by 0.0195682
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.937
ELB improved by 0.0167768
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.922
ELB improved by 0.0145548
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.909
ELB improved by 0.0127596
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.898
ELB improved by 0.0112897
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.888
ELB improved by 0.0100716
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.879
ELB improved by 0.00905128
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-864.851
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-586.518
ELB improved by 278.333
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-526.391
ELB improved by 60.1262
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-483.421
ELB improved by 42.9705
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-461.298
ELB improved by 22.1227
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.935
ELB improved by 10.3632
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.792
ELB improved by 6.14283
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.701
ELB improved by 5.09107
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.623
ELB improved by 5.07774
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.327
ELB improved by 5.29618
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.075
ELB improved by 5.25185
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.436
ELB improved by 4.63915
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.886
ELB improved by 3.55039
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.478
ELB improved by 2.40788
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.937
ELB improved by 1.5407
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.94
ELB improved by 0.99727
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.254
ELB improved by 0.685842
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.744
ELB improved by 0.510488
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.335
ELB improved by 0.408521
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.991
ELB improved by 0.344504
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.692
ELB improved by 0.298894
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.43
ELB improved by 0.261709
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.2
ELB improved by 0.229557
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.998
ELB improved by 0.202401
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.817
ELB improved by 0.180552
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.654
ELB improved by 0.163656
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.503
ELB improved by 0.151
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.361
ELB improved by 0.141769
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.226
ELB improved by 0.134911
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.097
ELB improved by 0.128828
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.976
ELB improved by 0.121508
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.864
ELB improved by 0.111561
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.765
ELB improved by 0.0993797
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.678
ELB improved by 0.0869145
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.602
ELB improved by 0.0761933
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.533
ELB improved by 0.0682458
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.47
ELB improved by 0.0630939
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.41
ELB improved by 0.0602584
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.351
ELB improved by 0.0591984
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.291
ELB improved by 0.0595125
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.23
ELB improved by 0.0609708
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.167
ELB improved by 0.063483
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.1
ELB improved by 0.0670586
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.028
ELB improved by 0.0717795
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.95
ELB improved by 0.0777848
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.865
ELB improved by 0.0852663
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.771
ELB improved by 0.0944678
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.665
ELB improved by 0.10569
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.546
ELB improved by 0.119294
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.41
ELB improved by 0.135713
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.254
ELB improved by 0.155455
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.075
ELB improved by 0.179112
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.868
ELB improved by 0.207361
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.627
ELB improved by 0.240925
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.347
ELB improved by 0.28042
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.021
ELB improved by 0.325923
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.645
ELB improved by 0.376084
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.217
ELB improved by 0.427117
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.745
ELB improved by 0.472958
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.237
ELB improved by 0.507538
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.71
ELB improved by 0.527129
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.179
ELB improved by 0.530609
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.66
ELB improved by 0.519129
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.163
ELB improved by 0.496749
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.692
ELB improved by 0.47115
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.239
ELB improved by 0.453145
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.785
ELB improved by 0.453736
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.309
ELB improved by 0.476681
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.801
ELB improved by 0.508046
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.283
ELB improved by 0.517842
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.795
ELB improved by 0.487969
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.359
ELB improved by 0.435982
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.96
ELB improved by 0.398355
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.559
ELB improved by 0.401562
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.109
ELB improved by 0.449684
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.593
ELB improved by 0.516047
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.065
ELB improved by 0.528302
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.609
ELB improved by 0.455356
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.205
ELB improved by 0.404425
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.777
ELB improved by 0.427601
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.278
ELB improved by 0.498987
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.739
ELB improved by 0.539372
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.233
ELB improved by 0.505618
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.776
ELB improved by 0.457609
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.38
ELB improved by 0.395688
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.087
ELB improved by 0.292846
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.9
ELB improved by 0.187672
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.784
ELB improved by 0.115756
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.71
ELB improved by 0.074304
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.658
ELB improved by 0.0511659
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.621
ELB improved by 0.0378407
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.591
ELB improved by 0.0297001
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.567
ELB improved by 0.0243805
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.546
ELB improved by 0.0206708
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.528
ELB improved by 0.0179317
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.512
ELB improved by 0.0158125
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.498
ELB improved by 0.0141132
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.485
ELB improved by 0.0127148
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.474
ELB improved by 0.0115433
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.463
ELB improved by 0.0105501
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.453
ELB improved by 0.00970152
ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
>
> proc.time()
user system elapsed
1.039 0.093 1.202
graper.Rcheck/graper-Ex.timings
| name | user | system | elapsed | |
| coef.graper | 0.013 | 0.007 | 0.021 | |
| getPIPs | 0.012 | 0.007 | 0.019 | |
| graper | 0.019 | 0.010 | 0.029 | |
| makeExampleData | 0.002 | 0.001 | 0.003 | |
| makeExampleDataWithUnequalGroups | 0.002 | 0.000 | 0.003 | |
| plotELBO | 0.119 | 0.008 | 0.127 | |
| plotGroupPenalties | 0.444 | 0.008 | 0.465 | |
| plotPosterior | 0.214 | 0.012 | 0.233 | |
| predict.graper | 0.218 | 0.038 | 0.286 | |
| print.graper | 0.011 | 0.004 | 0.015 | |