Britta Velten
| Snapshot Date: 2026-02-05 13:40 -0500 (Thu, 05 Feb 2026) |
| git_url: https://git.bioconductor.org/packages/graper |
| git_branch: devel |
| git_last_commit: 95474d7 |
| git_last_commit_date: 2025-10-29 10:49:21 -0500 (Wed, 29 Oct 2025) |
| Back to Build/check report for BioC 3.23: simplified long |
|
This page was generated on 2026-02-06 11:32 -0500 (Fri, 06 Feb 2026).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) | x86_64 | R Under development (unstable) (2026-01-15 r89304) -- "Unsuffered Consequences" | 4857 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 922/2347 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| graper 1.27.0 (landing page) Britta Velten
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | | ||||||||
| See other builds for graper in R Universe. | ||||||||||||||
|
To the developers/maintainers of the graper package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: graper |
| Version: 1.27.0 |
| Command: /home/biocbuild/bbs-3.23-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.23-bioc/R/site-library --timings graper_1.27.0.tar.gz |
| StartedAt: 2026-02-06 00:09:48 -0500 (Fri, 06 Feb 2026) |
| EndedAt: 2026-02-06 00:11:20 -0500 (Fri, 06 Feb 2026) |
| EllapsedTime: 92.1 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: graper.Rcheck |
| Warnings: 0 |
##############################################################################
##############################################################################
###
### Running command:
###
### /home/biocbuild/bbs-3.23-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.23-bioc/R/site-library --timings graper_1.27.0.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/home/biocbuild/bbs-3.23-bioc/meat/graper.Rcheck’
* using R Under development (unstable) (2026-01-15 r89304)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
gcc (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0
GNU Fortran (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0
* running under: Ubuntu 24.04.3 LTS
* using session charset: UTF-8
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.27.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* used C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0’
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... INFO
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘testthat.R’
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... OK
* checking PDF version of manual ... OK
* DONE
Status: 1 NOTE
See
‘/home/biocbuild/bbs-3.23-bioc/meat/graper.Rcheck/00check.log’
for details.
graper.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.23-bioc/R/bin/R CMD INSTALL graper ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.23-bioc/R/site-library’ * installing *source* package ‘graper’ ... ** this is package ‘graper’ version ‘1.27.0’ ** using staged installation ** libs using C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0’ g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.23-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.23-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.23-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.23-bioc/R/site-library/BH/include' -I/usr/local/include -fpic -g -O2 -Wall -Werror=format-security -c RcppExports.cpp -o RcppExports.o g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.23-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.23-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.23-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.23-bioc/R/site-library/BH/include' -I/usr/local/include -fpic -g -O2 -Wall -Werror=format-security -c fit_graper.cpp -o fit_graper.o g++ -std=gnu++17 -shared -L/home/biocbuild/bbs-3.23-bioc/R/lib -L/usr/local/lib -o graper.so RcppExports.o fit_graper.o -llapack -L/home/biocbuild/bbs-3.23-bioc/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/biocbuild/bbs-3.23-bioc/R/lib -lR installing to /home/biocbuild/bbs-3.23-bioc/R/site-library/00LOCK-graper/00new/graper/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (graper)
graper.Rcheck/tests/testthat.Rout
R Under development (unstable) (2026-01-15 r89304) -- "Unsuffered Consequences"
Copyright (C) 2026 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(testthat)
> library(graper)
>
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-849.625
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-586.658
ELB improved by 262.967
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-526.656
ELB improved by 60.002
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-484.277
ELB improved by 42.3786
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-463.5
ELB improved by 20.7772
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-454.619
ELB improved by 8.88131
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.98
ELB improved by 5.63893
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.281
ELB improved by 5.69926
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.856
ELB improved by 6.42486
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.91
ELB improved by 6.94612
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.419
ELB improved by 6.49114
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.473
ELB improved by 4.94569
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.223
ELB improved by 3.24973
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.083
ELB improved by 2.13966
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.56
ELB improved by 1.52379
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.43
ELB improved by 1.12935
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.557
ELB improved by 0.872877
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.83
ELB improved by 0.727163
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.19
ELB improved by 0.64019
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.617
ELB improved by 0.573525
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.096
ELB improved by 0.520245
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.608
ELB improved by 0.488081
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.133
ELB improved by 0.475574
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.658
ELB improved by 0.474256
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.181
ELB improved by 0.476997
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.702
ELB improved by 0.479594
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.222
ELB improved by 0.479984
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.744
ELB improved by 0.477651
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.271
ELB improved by 0.473258
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.803
ELB improved by 0.468248
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.338
ELB improved by 0.464356
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.875
ELB improved by 0.463117
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.41
ELB improved by 0.465521
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.938
ELB improved by 0.471835
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.456
ELB improved by 0.481587
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.963
ELB improved by 0.493676
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.456
ELB improved by 0.506573
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.937
ELB improved by 0.51862
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.409
ELB improved by 0.528459
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.873
ELB improved by 0.535668
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.332
ELB improved by 0.541786
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.78
ELB improved by 0.551597
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.207
ELB improved by 0.572459
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.602
ELB improved by 0.605308
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.961
ELB improved by 0.641257
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.272
ELB improved by 0.689328
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.619
ELB improved by 0.652915
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.175
ELB improved by 0.443764
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.913
ELB improved by 0.261628
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.742
ELB improved by 0.171646
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.606
ELB improved by 0.135319
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.478
ELB improved by 0.127893
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.338
ELB improved by 0.140683
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.168
ELB improved by 0.169658
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.961
ELB improved by 0.206865
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.723
ELB improved by 0.23827
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.471
ELB improved by 0.252013
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.225
ELB improved by 0.246121
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.997
ELB improved by 0.228047
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.788
ELB improved by 0.209062
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.595
ELB improved by 0.192572
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.422
ELB improved by 0.172846
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.277
ELB improved by 0.145716
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.162
ELB improved by 0.114571
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.076
ELB improved by 0.0863131
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.011
ELB improved by 0.0650277
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.96
ELB improved by 0.0506463
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.919
ELB improved by 0.0412724
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.884
ELB improved by 0.0350937
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.853
ELB improved by 0.0309156
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.825
ELB improved by 0.028057
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.798
ELB improved by 0.0261538
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.773
ELB improved by 0.0250201
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.749
ELB improved by 0.0245652
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.724
ELB improved by 0.0247413
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.699
ELB improved by 0.0254939
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.672
ELB improved by 0.0267043
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.644
ELB improved by 0.0281228
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.615
ELB improved by 0.0293296
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.585
ELB improved by 0.0297896
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.556
ELB improved by 0.0290445
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.529
ELB improved by 0.0269586
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.505
ELB improved by 0.0238191
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.485
ELB improved by 0.0201851
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.468
ELB improved by 0.0166161
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.455
ELB improved by 0.0134841
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.444
ELB improved by 0.0109401
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.435
ELB improved by 0.00897712
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-820.638
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-571.175
ELB improved by 249.463
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-511.873
ELB improved by 59.3025
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-472.169
ELB improved by 39.7039
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-452.535
ELB improved by 19.6342
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.38
ELB improved by 8.15506
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.661
ELB improved by 3.71894
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.165
ELB improved by 2.49552
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.065
ELB improved by 2.10038
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.139
ELB improved by 1.92557
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.344
ELB improved by 1.7957
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.697
ELB improved by 1.6465
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.233
ELB improved by 1.46395
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.973
ELB improved by 1.25989
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.919
ELB improved by 1.05469
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.051
ELB improved by 0.867395
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.338
ELB improved by 0.713267
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.736
ELB improved by 0.602242
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.199
ELB improved by 0.536993
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.684
ELB improved by 0.514578
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.153
ELB improved by 0.531259
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.566
ELB improved by 0.586728
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.88
ELB improved by 0.686284
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.039
ELB improved by 0.84043
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.984
ELB improved by 1.05567
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.677
ELB improved by 1.30632
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.15
ELB improved by 1.52733
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.454
ELB improved by 1.69617
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.593
ELB improved by 1.86076
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.551
ELB improved by 2.04203
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.398
ELB improved by 2.15352
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.313
ELB improved by 2.08449
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.43
ELB improved by 1.88362
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.743
ELB improved by 1.68626
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.155
ELB improved by 1.58788
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.754
ELB improved by 1.40154
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.724
ELB improved by 1.02988
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.012
ELB improved by 0.711922
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.503
ELB improved by 0.508797
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.118
ELB improved by 0.384827
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.82
ELB improved by 0.298236
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.592
ELB improved by 0.228493
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.416
ELB improved by 0.175301
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.278
ELB improved by 0.138601
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.164
ELB improved by 0.113888
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.067
ELB improved by 0.0965998
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.983
ELB improved by 0.0838311
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.91
ELB improved by 0.0739672
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.843
ELB improved by 0.0661168
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.784
ELB improved by 0.0597658
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.729
ELB improved by 0.054601
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.679
ELB improved by 0.0504213
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.632
ELB improved by 0.0470882
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.587
ELB improved by 0.0444922
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.544
ELB improved by 0.0425242
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.503
ELB improved by 0.0410457
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.464
ELB improved by 0.0398627
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.425
ELB improved by 0.0387198
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.388
ELB improved by 0.0373363
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.352
ELB improved by 0.0354908
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.319
ELB improved by 0.0331172
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.289
ELB improved by 0.0303399
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.261
ELB improved by 0.0274101
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.237
ELB improved by 0.0245872
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.215
ELB improved by 0.0220478
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.195
ELB improved by 0.0198636
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.177
ELB improved by 0.0180282
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.16
ELB improved by 0.0164977
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.145
ELB improved by 0.0152199
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.131
ELB improved by 0.0141494
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.118
ELB improved by 0.0132529
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.105
ELB improved by 0.0125079
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.093
ELB improved by 0.0119012
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.082
ELB improved by 0.0114273
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.071
ELB improved by 0.011087
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.06
ELB improved by 0.0108883
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.049
ELB improved by 0.0108474
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.038
ELB improved by 0.0109914
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.027
ELB improved by 0.0113623
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.014
ELB improved by 0.012023
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.001
ELB improved by 0.0130667
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.987
ELB improved by 0.0146309
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.97
ELB improved by 0.0169188
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.95
ELB improved by 0.0202345
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.925
ELB improved by 0.0250403
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.893
ELB improved by 0.0320478
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.85
ELB improved by 0.0423322
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.793
ELB improved by 0.0573113
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.715
ELB improved by 0.0779407
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.613
ELB improved by 0.101776
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.494
ELB improved by 0.118764
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.379
ELB improved by 0.115732
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.285
ELB improved by 0.0932925
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.219
ELB improved by 0.066552
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.173
ELB improved by 0.046335
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.139
ELB improved by 0.0338381
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.112
ELB improved by 0.0267655
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.089
ELB improved by 0.0230623
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.067
ELB improved by 0.0215287
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.046
ELB improved by 0.0216053
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.023
ELB improved by 0.0231588
iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.996
ELB improved by 0.0263633
iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.965
ELB improved by 0.0315996
iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.925
ELB improved by 0.0392049
iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.877
ELB improved by 0.0488337
iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.818
ELB improved by 0.0584754
iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.754
ELB improved by 0.0643565
iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.69
ELB improved by 0.0634578
iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.634
ELB improved by 0.0565723
iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.586
ELB improved by 0.047266
iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.548
ELB improved by 0.0384521
iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.517
ELB improved by 0.0312211
iteration 113
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.491
ELB improved by 0.0256156
iteration 114
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.47
ELB improved by 0.0213803
iteration 115
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.452
ELB improved by 0.0182486
iteration 116
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.435
ELB improved by 0.0160093
iteration 117
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.421
ELB improved by 0.0145143
iteration 118
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.407
ELB improved by 0.0136784
iteration 119
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.394
ELB improved by 0.0134825
iteration 120
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.38
ELB improved by 0.0139888
iteration 121
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.364
ELB improved by 0.015379
iteration 122
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.346
ELB improved by 0.0180343
iteration 123
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.324
ELB improved by 0.0226945
iteration 124
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.293
ELB improved by 0.0307378
iteration 125
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.248
ELB improved by 0.0445092
iteration 126
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.182
ELB improved by 0.0669171
iteration 127
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.084
ELB improved by 0.0975022
iteration 128
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.961
ELB improved by 0.123327
iteration 129
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.839
ELB improved by 0.122192
iteration 130
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.745
ELB improved by 0.093118
iteration 131
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.687
ELB improved by 0.058657
iteration 132
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.653
ELB improved by 0.0335173
iteration 133
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.635
ELB improved by 0.0186096
iteration 134
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.624
ELB improved by 0.0105085
iteration 135
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.618
ELB improved by 0.00624119
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-879.417
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-583.859
ELB improved by 295.559
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-525.32
ELB improved by 58.5388
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-486.885
ELB improved by 38.4343
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-468.035
ELB improved by 18.8507
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-458.904
ELB improved by 9.13032
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-453.444
ELB improved by 5.46052
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.079
ELB improved by 4.36463
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.805
ELB improved by 4.27409
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.314
ELB improved by 4.49088
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.687
ELB improved by 4.62721
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.338
ELB improved by 4.34959
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.758
ELB improved by 3.57912
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.144
ELB improved by 2.61398
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.313
ELB improved by 1.83134
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.961
ELB improved by 1.35209
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.881
ELB improved by 1.08034
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.983
ELB improved by 0.897755
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.224
ELB improved by 0.759103
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.558
ELB improved by 0.665585
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.947
ELB improved by 0.611709
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.362
ELB improved by 0.584304
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.789
ELB improved by 0.573041
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.217
ELB improved by 0.571946
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.639
ELB improved by 0.578059
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.049
ELB improved by 0.590382
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.44
ELB improved by 0.609266
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.804
ELB improved by 0.635973
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.131
ELB improved by 0.672229
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.412
ELB improved by 0.719753
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.632
ELB improved by 0.779754
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.78
ELB improved by 0.852219
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.845
ELB improved by 0.934575
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.826
ELB improved by 1.0194
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.733
ELB improved by 1.09266
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.596
ELB improved by 1.13743
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.448
ELB improved by 1.14756
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.307
ELB improved by 1.14075
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.164
ELB improved by 1.14314
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.01
ELB improved by 1.15382
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.852
ELB improved by 1.15802
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.8
ELB improved by 1.05267
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.009
ELB improved by 0.790858
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.478
ELB improved by 0.530269
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.125
ELB improved by 0.35352
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.869
ELB improved by 0.256346
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.655
ELB improved by 0.214011
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.445
ELB improved by 0.209902
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.206
ELB improved by 0.238672
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.914
ELB improved by 0.291612
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.595
ELB improved by 0.319027
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.332
ELB improved by 0.26321
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.146
ELB improved by 0.185727
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.99
ELB improved by 0.15693
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.814
ELB improved by 0.175991
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.592
ELB improved by 0.222004
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.355
ELB improved by 0.236538
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.178
ELB improved by 0.177064
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.076
ELB improved by 0.10178
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.021
ELB improved by 0.0552096
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.989
ELB improved by 0.0322818
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.967
ELB improved by 0.0213512
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.951
ELB improved by 0.0158746
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.939
ELB improved by 0.0128617
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.928
ELB improved by 0.0110019
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.918
ELB improved by 0.00971658
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-857.308
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-576.548
ELB improved by 280.76
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-513.237
ELB improved by 63.3107
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-473.386
ELB improved by 39.8515
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-457.221
ELB improved by 16.1647
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.669
ELB improved by 6.55252
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.598
ELB improved by 4.07045
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.919
ELB improved by 3.67945
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.004
ELB improved by 3.91482
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.51
ELB improved by 4.49354
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.272
ELB improved by 5.23825
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.574
ELB improved by 5.69823
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.319
ELB improved by 5.25527
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.37
ELB improved by 3.94837
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.801
ELB improved by 2.5694
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.205
ELB improved by 1.59627
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.193
ELB improved by 1.01158
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.514
ELB improved by 0.67931
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.018
ELB improved by 0.496055
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.625
ELB improved by 0.392417
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.298
ELB improved by 0.327409
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.016
ELB improved by 0.281544
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.77
ELB improved by 0.246279
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.552
ELB improved by 0.217789
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.358
ELB improved by 0.194212
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.183
ELB improved by 0.174499
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.025
ELB improved by 0.157947
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.881
ELB improved by 0.144012
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.749
ELB improved by 0.132248
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.627
ELB improved by 0.122279
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.513
ELB improved by 0.113798
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.407
ELB improved by 0.106555
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.306
ELB improved by 0.100352
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.211
ELB improved by 0.0950347
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.121
ELB improved by 0.0904851
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.034
ELB improved by 0.0866175
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.951
ELB improved by 0.0833736
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.87
ELB improved by 0.0807205
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.791
ELB improved by 0.0786509
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.714
ELB improved by 0.0771868
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.638
ELB improved by 0.0763866
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.561
ELB improved by 0.076357
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.484
ELB improved by 0.0772722
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.405
ELB improved by 0.0793969
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.322
ELB improved by 0.0831031
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.233
ELB improved by 0.0888427
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.136
ELB improved by 0.0969888
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.028
ELB improved by 0.107448
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.909
ELB improved by 0.119198
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.779
ELB improved by 0.130603
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.637
ELB improved by 0.141273
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.483
ELB improved by 0.153796
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.311
ELB improved by 0.17269
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.109
ELB improved by 0.201695
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.868
ELB improved by 0.240779
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.589
ELB improved by 0.279304
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.298
ELB improved by 0.290943
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.036
ELB improved by 0.262182
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.817
ELB improved by 0.219374
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.629
ELB improved by 0.187514
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.461
ELB improved by 0.168349
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.304
ELB improved by 0.156371
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.157
ELB improved by 0.147362
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.018
ELB improved by 0.138675
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.89
ELB improved by 0.128314
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.775
ELB improved by 0.114877
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.677
ELB improved by 0.0984486
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.596
ELB improved by 0.0809826
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.531
ELB improved by 0.0649445
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.479
ELB improved by 0.0517148
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.438
ELB improved by 0.0413977
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.404
ELB improved by 0.0334921
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.377
ELB improved by 0.0274179
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.354
ELB improved by 0.0227036
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.335
ELB improved by 0.019002
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.319
ELB improved by 0.0160628
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.305
ELB improved by 0.0137049
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.293
ELB improved by 0.0117954
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.283
ELB improved by 0.0102354
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.274
ELB improved by 0.00895081
ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
>
> proc.time()
user system elapsed
2.340 0.212 2.537
graper.Rcheck/graper-Ex.timings
| name | user | system | elapsed | |
| coef.graper | 0.053 | 0.016 | 0.069 | |
| getPIPs | 0.050 | 0.012 | 0.061 | |
| graper | 0.081 | 0.018 | 0.100 | |
| makeExampleData | 0.009 | 0.001 | 0.010 | |
| makeExampleDataWithUnequalGroups | 0.011 | 0.002 | 0.013 | |
| plotELBO | 0.313 | 0.024 | 0.339 | |
| plotGroupPenalties | 1.057 | 0.084 | 1.141 | |
| plotPosterior | 0.652 | 0.025 | 0.677 | |
| predict.graper | 2.039 | 0.087 | 2.127 | |
| print.graper | 0.047 | 0.014 | 0.061 | |