Britta Velten
| Snapshot Date: 2025-11-13 13:40 -0500 (Thu, 13 Nov 2025) |
| git_url: https://git.bioconductor.org/packages/graper |
| git_branch: devel |
| git_last_commit: 95474d7 |
| git_last_commit_date: 2025-10-29 10:49:21 -0500 (Wed, 29 Oct 2025) |
| Back to Multiple platform build/check report for BioC 3.23: simplified long |
|
This page was generated on 2025-11-14 11:35 -0500 (Fri, 14 Nov 2025).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) | x86_64 | R Under development (unstable) (2025-10-20 r88955) -- "Unsuffered Consequences" | 4825 |
| kjohnson3 | macOS 13.7.7 Ventura | arm64 | R Under development (unstable) (2025-11-04 r88984) -- "Unsuffered Consequences" | 4547 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 911/2325 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| graper 1.27.0 (landing page) Britta Velten
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | | ||||||||
| kjohnson3 | macOS 13.7.7 Ventura / arm64 | OK | OK | OK | OK | | ||||||||
|
To the developers/maintainers of the graper package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: graper |
| Version: 1.27.0 |
| Command: /home/biocbuild/bbs-3.23-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.23-bioc/R/site-library --timings graper_1.27.0.tar.gz |
| StartedAt: 2025-11-14 00:11:29 -0500 (Fri, 14 Nov 2025) |
| EndedAt: 2025-11-14 00:13:00 -0500 (Fri, 14 Nov 2025) |
| EllapsedTime: 91.2 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: graper.Rcheck |
| Warnings: 0 |
##############################################################################
##############################################################################
###
### Running command:
###
### /home/biocbuild/bbs-3.23-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.23-bioc/R/site-library --timings graper_1.27.0.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/home/biocbuild/bbs-3.23-bioc/meat/graper.Rcheck’
* using R Under development (unstable) (2025-10-20 r88955)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
gcc (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0
GNU Fortran (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0
* running under: Ubuntu 24.04.3 LTS
* using session charset: UTF-8
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.27.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* used C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0’
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... INFO
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘testthat.R’
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... OK
* checking PDF version of manual ... OK
* DONE
Status: 1 NOTE
See
‘/home/biocbuild/bbs-3.23-bioc/meat/graper.Rcheck/00check.log’
for details.
graper.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.23-bioc/R/bin/R CMD INSTALL graper ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.23-bioc/R/site-library’ * installing *source* package ‘graper’ ... ** this is package ‘graper’ version ‘1.27.0’ ** using staged installation ** libs using C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0’ g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.23-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.23-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.23-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.23-bioc/R/site-library/BH/include' -I/usr/local/include -fpic -g -O2 -Wall -Werror=format-security -c RcppExports.cpp -o RcppExports.o g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.23-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.23-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.23-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.23-bioc/R/site-library/BH/include' -I/usr/local/include -fpic -g -O2 -Wall -Werror=format-security -c fit_graper.cpp -o fit_graper.o g++ -std=gnu++17 -shared -L/home/biocbuild/bbs-3.23-bioc/R/lib -L/usr/local/lib -o graper.so RcppExports.o fit_graper.o -llapack -L/home/biocbuild/bbs-3.23-bioc/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/biocbuild/bbs-3.23-bioc/R/lib -lR installing to /home/biocbuild/bbs-3.23-bioc/R/site-library/00LOCK-graper/00new/graper/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (graper)
graper.Rcheck/tests/testthat.Rout
R Under development (unstable) (2025-10-20 r88955) -- "Unsuffered Consequences"
Copyright (C) 2025 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(testthat)
> library(graper)
>
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-856.479
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-560.651
ELB improved by 295.828
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-500.506
ELB improved by 60.1452
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-460.892
ELB improved by 39.6141
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.725
ELB improved by 17.1672
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.802
ELB improved by 6.9228
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.791
ELB improved by 4.01054
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.784
ELB improved by 3.00715
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.259
ELB improved by 2.52471
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.012
ELB improved by 2.24741
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.963
ELB improved by 2.04936
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.078
ELB improved by 1.88456
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.342
ELB improved by 1.73588
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.747
ELB improved by 1.59504
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.291
ELB improved by 1.45659
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.974
ELB improved by 1.31628
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.804
ELB improved by 1.16993
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.791
ELB improved by 1.01372
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.942
ELB improved by 0.848248
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.259
ELB improved by 0.683173
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.725
ELB improved by 0.533799
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.314
ELB improved by 0.411126
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.997
ELB improved by 0.317415
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.748
ELB improved by 0.248872
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.548
ELB improved by 0.199656
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.384
ELB improved by 0.164293
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.246
ELB improved by 0.13852
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.126
ELB improved by 0.119305
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.022
ELB improved by 0.10459
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.929
ELB improved by 0.0930106
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.845
ELB improved by 0.0836628
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.769
ELB improved by 0.0759476
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.7
ELB improved by 0.0694616
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.636
ELB improved by 0.0639285
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.577
ELB improved by 0.0591544
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.522
ELB improved by 0.0549996
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.47
ELB improved by 0.0513606
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.422
ELB improved by 0.048159
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.377
ELB improved by 0.0453333
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.334
ELB improved by 0.0428347
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.293
ELB improved by 0.0406234
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.255
ELB improved by 0.0386669
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.218
ELB improved by 0.0369376
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.182
ELB improved by 0.0354126
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.148
ELB improved by 0.0340723
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.115
ELB improved by 0.0329001
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.083
ELB improved by 0.0318817
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.052
ELB improved by 0.0310048
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.022
ELB improved by 0.0302592
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.992
ELB improved by 0.029636
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.963
ELB improved by 0.0291278
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.935
ELB improved by 0.0287283
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.906
ELB improved by 0.0284325
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.878
ELB improved by 0.0282364
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.85
ELB improved by 0.028137
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.822
ELB improved by 0.0281322
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.793
ELB improved by 0.028221
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.765
ELB improved by 0.028403
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.736
ELB improved by 0.0286792
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.707
ELB improved by 0.0290514
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.678
ELB improved by 0.0295224
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.648
ELB improved by 0.0300962
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.617
ELB improved by 0.0307783
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.585
ELB improved by 0.0315753
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.553
ELB improved by 0.0324956
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.519
ELB improved by 0.0335496
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.485
ELB improved by 0.0347496
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.448
ELB improved by 0.0361104
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.411
ELB improved by 0.0376498
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.371
ELB improved by 0.0393887
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.33
ELB improved by 0.0413523
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.286
ELB improved by 0.04357
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.24
ELB improved by 0.0460765
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.191
ELB improved by 0.048913
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.139
ELB improved by 0.0521274
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.084
ELB improved by 0.0557759
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.024
ELB improved by 0.0599236
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.959
ELB improved by 0.0646458
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.889
ELB improved by 0.0700282
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.813
ELB improved by 0.0761675
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.73
ELB improved by 0.0831704
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.639
ELB improved by 0.0911517
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.538
ELB improved by 0.10023
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.428
ELB improved by 0.11052
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.306
ELB improved by 0.122119
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.171
ELB improved by 0.135087
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.021
ELB improved by 0.14941
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.856
ELB improved by 0.164948
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.675
ELB improved by 0.181365
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.477
ELB improved by 0.198047
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.263
ELB improved by 0.214061
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.035
ELB improved by 0.228203
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.795
ELB improved by 0.239184
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.549
ELB improved by 0.245899
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.302
ELB improved by 0.247685
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.057
ELB improved by 0.244473
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.82
ELB improved by 0.236833
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.595
ELB improved by 0.225929
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.381
ELB improved by 0.213407
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.18
ELB improved by 0.201284
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.988
ELB improved by 0.192017
iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.799
ELB improved by 0.189005
iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.601
ELB improved by 0.197914
iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.372
ELB improved by 0.229048
iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.074
ELB improved by 0.298121
iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.662
ELB improved by 0.411995
iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.122
ELB improved by 0.540185
iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.437
ELB improved by 0.684664
iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.523
ELB improved by 0.913524
iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.542
ELB improved by 0.981606
iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.839
ELB improved by 0.702997
iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.45
ELB improved by 0.388851
iteration 113
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.256
ELB improved by 0.194248
iteration 114
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.155
ELB improved by 0.100715
iteration 115
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.095
ELB improved by 0.0599721
iteration 116
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.053
ELB improved by 0.0416311
iteration 117
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.021
ELB improved by 0.0327648
iteration 118
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.992
ELB improved by 0.028381
iteration 119
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.966
ELB improved by 0.0264965
iteration 120
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.939
ELB improved by 0.0263263
iteration 121
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.912
ELB improved by 0.0276553
iteration 122
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.881
ELB improved by 0.0306376
iteration 123
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.845
ELB improved by 0.0357825
iteration 124
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.801
ELB improved by 0.0440664
iteration 125
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.744
ELB improved by 0.0571902
iteration 126
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.666
ELB improved by 0.0780645
iteration 127
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.554
ELB improved by 0.11165
iteration 128
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.388
ELB improved by 0.166045
iteration 129
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.136
ELB improved by 0.251845
iteration 130
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.767
ELB improved by 0.369504
iteration 131
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.303
ELB improved by 0.463473
iteration 132
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.88
ELB improved by 0.423205
iteration 133
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.604
ELB improved by 0.276012
iteration 134
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.45
ELB improved by 0.153787
iteration 135
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.359
ELB improved by 0.0913571
iteration 136
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.291
ELB improved by 0.0680327
iteration 137
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.226
ELB improved by 0.065034
iteration 138
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.155
ELB improved by 0.0711622
iteration 139
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.076
ELB improved by 0.0793298
iteration 140
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.99
ELB improved by 0.0850752
iteration 141
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.904
ELB improved by 0.0860274
iteration 142
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.823
ELB improved by 0.0816689
iteration 143
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.75
ELB improved by 0.0731221
iteration 144
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.688
ELB improved by 0.0619252
iteration 145
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.638
ELB improved by 0.0493044
iteration 146
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.602
ELB improved by 0.0368167
iteration 147
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.575
ELB improved by 0.026217
iteration 148
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.557
ELB improved by 0.0184187
iteration 149
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.544
ELB improved by 0.0132369
iteration 150
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.534
ELB improved by 0.00996178
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-873.124
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-597.427
ELB improved by 275.696
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-533.296
ELB improved by 64.1316
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-485.302
ELB improved by 47.994
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-462.366
ELB improved by 22.9361
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-453.215
ELB improved by 9.15104
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.605
ELB improved by 4.60977
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.24
ELB improved by 3.36434
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.312
ELB improved by 2.92807
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.602
ELB improved by 2.71054
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.052
ELB improved by 2.55028
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.671
ELB improved by 2.38094
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.5
ELB improved by 2.171
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.585
ELB improved by 1.91428
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.959
ELB improved by 1.62665
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.625
ELB improved by 1.33393
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.564
ELB improved by 1.06066
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.736
ELB improved by 0.82787
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.087
ELB improved by 0.648911
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.562
ELB improved by 0.524913
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.115
ELB improved by 0.44724
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.712
ELB improved by 0.40357
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.329
ELB improved by 0.382704
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.952
ELB improved by 0.376516
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.572
ELB improved by 0.379901
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.182
ELB improved by 0.390002
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.777
ELB improved by 0.40538
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.352
ELB improved by 0.425374
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.902
ELB improved by 0.449835
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.422
ELB improved by 0.479708
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.904
ELB improved by 0.518604
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.329
ELB improved by 0.574227
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.673
ELB improved by 0.656615
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.905
ELB improved by 0.767655
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.017
ELB improved by 0.888297
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.018
ELB improved by 0.998795
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.916
ELB improved by 1.10211
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.713
ELB improved by 1.20317
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.403
ELB improved by 1.30943
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.99
ELB improved by 1.41308
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.596
ELB improved by 1.39444
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.411
ELB improved by 1.18518
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.523
ELB improved by 0.88723
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.921
ELB improved by 0.602186
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.536
ELB improved by 0.385107
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.294
ELB improved by 0.242023
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.139
ELB improved by 0.154742
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.036
ELB improved by 0.103039
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.964
ELB improved by 0.0723327
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.91
ELB improved by 0.0537152
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.868
ELB improved by 0.0421094
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.833
ELB improved by 0.0346906
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.803
ELB improved by 0.0299001
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.777
ELB improved by 0.0269015
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.751
ELB improved by 0.0253058
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.726
ELB improved by 0.0250654
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.7
ELB improved by 0.0265025
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.669
ELB improved by 0.0305004
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.63
ELB improved by 0.038937
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.575
ELB improved by 0.0553386
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.49
ELB improved by 0.0847851
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.361
ELB improved by 0.129004
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.189
ELB improved by 0.172373
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.01
ELB improved by 0.179181
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.871
ELB improved by 0.1381
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.787
ELB improved by 0.0847832
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.739
ELB improved by 0.0477706
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.711
ELB improved by 0.0280643
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.692
ELB improved by 0.0184932
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.679
ELB improved by 0.01382
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.667
ELB improved by 0.0113711
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.657
ELB improved by 0.00993018
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-840.703
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-570.629
ELB improved by 270.074
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-510.798
ELB improved by 59.8311
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-469.585
ELB improved by 41.2123
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-451.02
ELB improved by 18.5658
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.994
ELB improved by 7.02545
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.446
ELB improved by 3.5481
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.926
ELB improved by 2.51957
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.742
ELB improved by 2.18412
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.672
ELB improved by 2.07036
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.645
ELB improved by 2.02685
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.652
ELB improved by 1.99359
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.716
ELB improved by 1.93518
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.889
ELB improved by 1.8278
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.225
ELB improved by 1.66368
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.768
ELB improved by 1.45671
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.533
ELB improved by 1.2355
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.508
ELB improved by 1.02417
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.677
ELB improved by 0.831681
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.015
ELB improved by 0.662124
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.491
ELB improved by 0.523432
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.071
ELB improved by 0.420572
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.72
ELB improved by 0.350408
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.415
ELB improved by 0.30513
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.138
ELB improved by 0.276818
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.879
ELB improved by 0.259437
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.63
ELB improved by 0.248964
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.387
ELB improved by 0.24289
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.147
ELB improved by 0.239712
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.909
ELB improved by 0.238565
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.67
ELB improved by 0.239013
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.429
ELB improved by 0.240914
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.184
ELB improved by 0.244373
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.935
ELB improved by 0.249715
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.677
ELB improved by 0.257497
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.409
ELB improved by 0.268533
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.125
ELB improved by 0.283886
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.82
ELB improved by 0.304815
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.487
ELB improved by 0.332654
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.119
ELB improved by 0.368794
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.703
ELB improved by 0.415221
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.227
ELB improved by 0.476039
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.668
ELB improved by 0.558899
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411
ELB improved by 0.668408
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.219
ELB improved by 0.780906
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.366
ELB improved by 0.853137
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.471
ELB improved by 0.895352
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.546
ELB improved by 0.924759
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.653
ELB improved by 0.89294
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.85
ELB improved by 0.80297
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.121
ELB improved by 0.729065
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.393
ELB improved by 0.727991
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.576
ELB improved by 0.817126
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.689
ELB improved by 0.886261
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.766
ELB improved by 0.923968
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.739
ELB improved by 1.02654
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.754
ELB improved by 0.984604
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.97
ELB improved by 0.784534
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.294
ELB improved by 0.676212
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.626
ELB improved by 0.667164
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.066
ELB improved by 0.560027
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.696
ELB improved by 0.370309
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.461
ELB improved by 0.235378
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.296
ELB improved by 0.164703
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.162
ELB improved by 0.133804
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.033
ELB improved by 0.129462
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.886
ELB improved by 0.1463
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.712
ELB improved by 0.174074
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.527
ELB improved by 0.184967
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.371
ELB improved by 0.156183
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.266
ELB improved by 0.105482
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.202
ELB improved by 0.0635644
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.163
ELB improved by 0.0392014
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.136
ELB improved by 0.0265826
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.117
ELB improved by 0.0197809
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.101
ELB improved by 0.0157604
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.088
ELB improved by 0.0131592
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.076
ELB improved by 0.0113446
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.066
ELB improved by 0.0100015
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.057
ELB improved by 0.00896199
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-906.311
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-577.423
ELB improved by 328.888
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-518.632
ELB improved by 58.7911
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-485.891
ELB improved by 32.7415
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-471.323
ELB improved by 14.5676
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-464.125
ELB improved by 7.1981
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-458.965
ELB improved by 5.15972
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-454.408
ELB improved by 4.55674
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.073
ELB improved by 4.33538
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.87
ELB improved by 4.2036
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.851
ELB improved by 4.01833
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.189
ELB improved by 3.66251
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.105
ELB improved by 3.08351
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.733
ELB improved by 2.37201
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.012
ELB improved by 1.72084
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.763
ELB improved by 1.24979
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.818
ELB improved by 0.944979
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.076
ELB improved by 0.741555
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.484
ELB improved by 0.591879
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.007
ELB improved by 0.476969
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.617
ELB improved by 0.389911
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.293
ELB improved by 0.324169
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.02
ELB improved by 0.273427
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.786
ELB improved by 0.233253
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.585
ELB improved by 0.200925
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.411
ELB improved by 0.174645
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.258
ELB improved by 0.153058
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.123
ELB improved by 0.135103
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.003
ELB improved by 0.119969
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.896
ELB improved by 0.107057
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.8
ELB improved by 0.0959285
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.713
ELB improved by 0.08626
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.636
ELB improved by 0.0778075
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.565
ELB improved by 0.0703815
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.501
ELB improved by 0.0638306
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.443
ELB improved by 0.0580314
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.391
ELB improved by 0.0528812
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.342
ELB improved by 0.0482939
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.298
ELB improved by 0.0441964
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.257
ELB improved by 0.0405268
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.22
ELB improved by 0.0372318
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.186
ELB improved by 0.034266
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.154
ELB improved by 0.0315902
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.125
ELB improved by 0.0291706
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.098
ELB improved by 0.0269782
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.073
ELB improved by 0.0249875
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.05
ELB improved by 0.0231768
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.029
ELB improved by 0.0215266
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.009
ELB improved by 0.0200204
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.99
ELB improved by 0.0186432
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.973
ELB improved by 0.0173823
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.956
ELB improved by 0.016226
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.941
ELB improved by 0.0151644
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.927
ELB improved by 0.0141883
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.914
ELB improved by 0.0132897
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.901
ELB improved by 0.0124617
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.889
ELB improved by 0.0116976
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.878
ELB improved by 0.0109919
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.868
ELB improved by 0.0103394
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.858
ELB improved by 0.00973553
ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
>
> proc.time()
user system elapsed
2.338 0.202 2.527
graper.Rcheck/graper-Ex.timings
| name | user | system | elapsed | |
| coef.graper | 0.051 | 0.014 | 0.067 | |
| getPIPs | 0.049 | 0.014 | 0.061 | |
| graper | 0.079 | 0.018 | 0.098 | |
| makeExampleData | 0.009 | 0.000 | 0.010 | |
| makeExampleDataWithUnequalGroups | 0.011 | 0.002 | 0.013 | |
| plotELBO | 0.319 | 0.025 | 0.345 | |
| plotGroupPenalties | 1.123 | 0.070 | 1.197 | |
| plotPosterior | 0.642 | 0.018 | 0.659 | |
| predict.graper | 2.076 | 0.067 | 2.144 | |
| print.graper | 0.047 | 0.016 | 0.063 | |