Britta Velten
| Snapshot Date: 2026-03-31 13:40 -0400 (Tue, 31 Mar 2026) |
| git_url: https://git.bioconductor.org/packages/graper |
| git_branch: devel |
| git_last_commit: 95474d7 |
| git_last_commit_date: 2025-10-29 10:49:21 -0400 (Wed, 29 Oct 2025) |
| Back to Multiple platform build/check report for BioC 3.23: simplified long |
|
This page was generated on 2026-04-01 13:06 -0400 (Wed, 01 Apr 2026).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) | x86_64 | 4.6.0 alpha (2026-03-30 r89742) | 4816 |
| kjohnson3 | macOS 13.7.7 Ventura | arm64 | 4.6.0 alpha (2026-03-28 r89739) | 4539 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 933/2374 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| graper 1.27.0 (landing page) Britta Velten
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | | ||||||||
| kjohnson3 | macOS 13.7.7 Ventura / arm64 | OK | OK | OK | OK | | ||||||||
| See other builds for graper in R Universe. | ||||||||||||||
|
To the developers/maintainers of the graper package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: graper |
| Version: 1.27.0 |
| Command: /home/biocbuild/bbs-3.23-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.23-bioc/R/site-library --timings graper_1.27.0.tar.gz |
| StartedAt: 2026-03-31 23:46:39 -0400 (Tue, 31 Mar 2026) |
| EndedAt: 2026-03-31 23:48:09 -0400 (Tue, 31 Mar 2026) |
| EllapsedTime: 89.2 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: graper.Rcheck |
| Warnings: 0 |
##############################################################################
##############################################################################
###
### Running command:
###
### /home/biocbuild/bbs-3.23-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.23-bioc/R/site-library --timings graper_1.27.0.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/home/biocbuild/bbs-3.23-bioc/meat/graper.Rcheck’
* using R version 4.6.0 alpha (2026-03-30 r89742)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
gcc (Ubuntu 13.3.0-6ubuntu2~24.04.1) 13.3.0
GNU Fortran (Ubuntu 13.3.0-6ubuntu2~24.04.1) 13.3.0
* running under: Ubuntu 24.04.4 LTS
* using session charset: UTF-8
* current time: 2026-04-01 03:46:40 UTC
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.27.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* used C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04.1) 13.3.0’
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... INFO
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘testthat.R’
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... OK
* checking PDF version of manual ... OK
* DONE
Status: 1 NOTE
See
‘/home/biocbuild/bbs-3.23-bioc/meat/graper.Rcheck/00check.log’
for details.
graper.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.23-bioc/R/bin/R CMD INSTALL graper ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.23-bioc/R/site-library’ * installing *source* package ‘graper’ ... ** this is package ‘graper’ version ‘1.27.0’ ** using staged installation ** libs using C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04.1) 13.3.0’ g++ -std=gnu++20 -I"/home/biocbuild/bbs-3.23-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.23-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.23-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.23-bioc/R/site-library/BH/include' -I/usr/local/include -fpic -g -O2 -Wall -Werror=format-security -c RcppExports.cpp -o RcppExports.o g++ -std=gnu++20 -I"/home/biocbuild/bbs-3.23-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.23-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.23-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.23-bioc/R/site-library/BH/include' -I/usr/local/include -fpic -g -O2 -Wall -Werror=format-security -c fit_graper.cpp -o fit_graper.o g++ -std=gnu++20 -shared -L/usr/local/lib -o graper.so RcppExports.o fit_graper.o -llapack -L/home/biocbuild/bbs-3.23-bioc/R/lib -lRblas -lgfortran -lm -lquadmath installing to /home/biocbuild/bbs-3.23-bioc/R/site-library/00LOCK-graper/00new/graper/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (graper)
graper.Rcheck/tests/testthat.Rout
R version 4.6.0 alpha (2026-03-30 r89742)
Copyright (C) 2026 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(testthat)
> library(graper)
>
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-879.408
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-578.905
ELB improved by 300.502
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-518.458
ELB improved by 60.4475
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-480.431
ELB improved by 38.0265
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-464.741
ELB improved by 15.6904
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-457.901
ELB improved by 6.83934
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-453.219
ELB improved by 4.68285
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.024
ELB improved by 4.19466
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.833
ELB improved by 4.19099
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.634
ELB improved by 4.19906
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.689
ELB improved by 3.94479
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.358
ELB improved by 3.33122
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.847
ELB improved by 2.51073
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.097
ELB improved by 1.7503
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.892
ELB improved by 1.20464
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.021
ELB improved by 0.871086
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.346
ELB improved by 0.67553
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.803
ELB improved by 0.54272
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.372
ELB improved by 0.430306
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.04
ELB improved by 0.332629
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.784
ELB improved by 0.256296
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.582
ELB improved by 0.202042
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.417
ELB improved by 0.164848
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.278
ELB improved by 0.138844
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.158
ELB improved by 0.119721
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.053
ELB improved by 0.10488
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.96
ELB improved by 0.0928674
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.878
ELB improved by 0.0828642
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.803
ELB improved by 0.0743782
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.736
ELB improved by 0.0670893
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.675
ELB improved by 0.0607724
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.62
ELB improved by 0.0552604
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.57
ELB improved by 0.0504238
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.523
ELB improved by 0.04616
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.481
ELB improved by 0.0423858
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.442
ELB improved by 0.0390332
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.406
ELB improved by 0.0360459
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.373
ELB improved by 0.0333768
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.342
ELB improved by 0.0309865
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.313
ELB improved by 0.0288415
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.286
ELB improved by 0.0269136
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.261
ELB improved by 0.0251784
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.237
ELB improved by 0.0236154
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.215
ELB improved by 0.0222067
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.194
ELB improved by 0.0209369
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.174
ELB improved by 0.0197926
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.155
ELB improved by 0.0187621
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.138
ELB improved by 0.0178351
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.121
ELB improved by 0.0170024
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.104
ELB improved by 0.0162557
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.089
ELB improved by 0.0155871
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.074
ELB improved by 0.0149893
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.059
ELB improved by 0.014455
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.045
ELB improved by 0.0139767
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.032
ELB improved by 0.0135469
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.019
ELB improved by 0.0131574
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.006
ELB improved by 0.0127998
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.993
ELB improved by 0.0124656
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.981
ELB improved by 0.0121464
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.969
ELB improved by 0.011834
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.958
ELB improved by 0.0115218
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.947
ELB improved by 0.0112046
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.936
ELB improved by 0.0108795
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.925
ELB improved by 0.0105459
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.915
ELB improved by 0.0102053
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.905
ELB improved by 0.00986121
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-869.198
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-588.552
ELB improved by 280.646
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-522.608
ELB improved by 65.9438
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-477.264
ELB improved by 45.3445
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-456.138
ELB improved by 21.1255
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.565
ELB improved by 8.57349
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.245
ELB improved by 4.31969
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.344
ELB improved by 2.90086
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.958
ELB improved by 2.3866
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.78
ELB improved by 2.17727
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.702
ELB improved by 2.07839
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.684
ELB improved by 2.01829
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.716
ELB improved by 1.96802
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.805
ELB improved by 1.91023
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.977
ELB improved by 1.82799
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.272
ELB improved by 1.70484
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.741
ELB improved by 1.53191
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.422
ELB improved by 1.3183
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.328
ELB improved by 1.09466
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.428
ELB improved by 0.899127
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.675
ELB improved by 0.753299
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.021
ELB improved by 0.653924
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.433
ELB improved by 0.588364
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.883
ELB improved by 0.550223
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.346
ELB improved by 0.537068
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.801
ELB improved by 0.544473
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.234
ELB improved by 0.567106
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.633
ELB improved by 0.601193
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.988
ELB improved by 0.645246
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.288
ELB improved by 0.699751
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.522
ELB improved by 0.766095
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.677
ELB improved by 0.844402
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.747
ELB improved by 0.930651
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.732
ELB improved by 1.01498
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.649
ELB improved by 1.08255
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.533
ELB improved by 1.11583
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.434
ELB improved by 1.09883
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.41
ELB improved by 1.02436
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.509
ELB improved by 0.900667
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.759
ELB improved by 0.750628
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.157
ELB improved by 0.601657
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.683
ELB improved by 0.473877
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.308
ELB improved by 0.375556
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.001
ELB improved by 0.306377
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.738
ELB improved by 0.263123
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.494
ELB improved by 0.244308
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.24
ELB improved by 0.253767
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.937
ELB improved by 0.303174
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.526
ELB improved by 0.411327
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.921
ELB improved by 0.604218
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.031
ELB improved by 0.890208
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.928
ELB improved by 1.10292
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.982
ELB improved by 0.946345
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.385
ELB improved by 0.597311
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.049
ELB improved by 0.335477
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.864
ELB improved by 0.184746
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.753
ELB improved by 0.111756
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.674
ELB improved by 0.0782857
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.613
ELB improved by 0.0615496
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.561
ELB improved by 0.0521048
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.514
ELB improved by 0.0463679
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.471
ELB improved by 0.0429651
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.43
ELB improved by 0.0413399
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.389
ELB improved by 0.0411945
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.347
ELB improved by 0.0421909
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.303
ELB improved by 0.0437276
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.258
ELB improved by 0.0448479
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.214
ELB improved by 0.0444803
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.172
ELB improved by 0.0420344
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.134
ELB improved by 0.0378617
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.101
ELB improved by 0.0330343
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.072
ELB improved by 0.0286596
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.047
ELB improved by 0.0254147
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.023
ELB improved by 0.0235334
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395
ELB improved by 0.022996
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.976
ELB improved by 0.0236649
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.951
ELB improved by 0.0252759
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.924
ELB improved by 0.0272996
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.895
ELB improved by 0.028801
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.866
ELB improved by 0.0285999
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.84
ELB improved by 0.0259683
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.819
ELB improved by 0.021376
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.803
ELB improved by 0.016261
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.791
ELB improved by 0.0119199
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.782
ELB improved by 0.00882234
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-860.067
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-615.429
ELB improved by 244.638
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-556.888
ELB improved by 58.5408
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-506.854
ELB improved by 50.0344
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-476.183
ELB improved by 30.6708
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-462.029
ELB improved by 14.1545
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-455.544
ELB improved by 6.4845
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-451.6
ELB improved by 3.94402
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.573
ELB improved by 3.02678
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.006
ELB improved by 2.56707
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.769
ELB improved by 2.23777
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.839
ELB improved by 1.9291
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.221
ELB improved by 1.61884
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.902
ELB improved by 1.31883
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.854
ELB improved by 1.04817
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.033
ELB improved by 0.820296
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.394
ELB improved by 0.639335
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.892
ELB improved by 0.501785
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.492
ELB improved by 0.400116
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.166
ELB improved by 0.325901
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.894
ELB improved by 0.271708
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.663
ELB improved by 0.231812
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.461
ELB improved by 0.202122
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.281
ELB improved by 0.179812
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.118
ELB improved by 0.162938
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.968
ELB improved by 0.150151
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.827
ELB improved by 0.140513
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.694
ELB improved by 0.13337
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.565
ELB improved by 0.128272
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.441
ELB improved by 0.124923
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.317
ELB improved by 0.123135
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.195
ELB improved by 0.122811
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.071
ELB improved by 0.123923
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.944
ELB improved by 0.126509
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.813
ELB improved by 0.130669
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.677
ELB improved by 0.136566
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.532
ELB improved by 0.144428
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.378
ELB improved by 0.154562
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.211
ELB improved by 0.167354
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.027
ELB improved by 0.18329
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.824
ELB improved by 0.202993
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.597
ELB improved by 0.227312
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.339
ELB improved by 0.2575
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.044
ELB improved by 0.295537
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.699
ELB improved by 0.344614
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.29
ELB improved by 0.409694
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.792
ELB improved by 0.497583
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.178
ELB improved by 0.614397
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.421
ELB improved by 0.756853
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.518
ELB improved by 0.902398
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.499
ELB improved by 1.01956
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.41
ELB improved by 1.08887
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.308
ELB improved by 1.10169
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.249
ELB improved by 1.05972
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.265
ELB improved by 0.983626
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.354
ELB improved by 0.911293
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.47
ELB improved by 0.883369
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.574
ELB improved by 0.896562
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.714
ELB improved by 0.859397
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.997
ELB improved by 0.717576
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.452
ELB improved by 0.545106
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.048
ELB improved by 0.403956
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.755
ELB improved by 0.292782
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.552
ELB improved by 0.202852
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.416
ELB improved by 0.13602
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.324
ELB improved by 0.0917313
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.26
ELB improved by 0.0640882
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.213
ELB improved by 0.0468824
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.177
ELB improved by 0.0358683
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.149
ELB improved by 0.0285447
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.125
ELB improved by 0.0234863
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.106
ELB improved by 0.0198671
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.088
ELB improved by 0.0171926
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.073
ELB improved by 0.015157
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.06
ELB improved by 0.0135656
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.047
ELB improved by 0.0122914
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.036
ELB improved by 0.0112498
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.026
ELB improved by 0.0103833
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.016
ELB improved by 0.00965232
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-858.615
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-559.803
ELB improved by 298.812
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-496.357
ELB improved by 63.4458
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-458.273
ELB improved by 38.0845
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.688
ELB improved by 17.5843
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.478
ELB improved by 8.20994
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.952
ELB improved by 4.52642
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.915
ELB improved by 3.03683
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.448
ELB improved by 2.46682
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.17
ELB improved by 2.27782
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.918
ELB improved by 2.25232
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.606
ELB improved by 2.3119
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.168
ELB improved by 2.43777
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.535
ELB improved by 2.63324
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.646
ELB improved by 2.88919
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.512
ELB improved by 3.13446
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.306
ELB improved by 3.2057
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.36
ELB improved by 2.94545
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.951
ELB improved by 2.40913
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.083
ELB improved by 1.86818
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.582
ELB improved by 1.50131
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.412
ELB improved by 1.16932
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.657
ELB improved by 0.755955
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.201
ELB improved by 0.45559
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.896
ELB improved by 0.30532
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.667
ELB improved by 0.228604
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.482
ELB improved by 0.184588
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.325
ELB improved by 0.156984
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.187
ELB improved by 0.13844
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.062
ELB improved by 0.125244
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.946
ELB improved by 0.115386
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.839
ELB improved by 0.10771
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.737
ELB improved by 0.10152
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.641
ELB improved by 0.0963776
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.549
ELB improved by 0.0919966
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.461
ELB improved by 0.0881827
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.376
ELB improved by 0.0848023
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.294
ELB improved by 0.081762
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.215
ELB improved by 0.0789969
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.139
ELB improved by 0.0764634
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.064
ELB improved by 0.0741337
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.992
ELB improved by 0.0719924
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.922
ELB improved by 0.0700342
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.854
ELB improved by 0.0682609
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.787
ELB improved by 0.0666802
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.722
ELB improved by 0.0653034
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.658
ELB improved by 0.0641435
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.595
ELB improved by 0.0632125
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.532
ELB improved by 0.0625191
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.47
ELB improved by 0.0620645
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.408
ELB improved by 0.0618391
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.347
ELB improved by 0.0618185
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.285
ELB improved by 0.0619611
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.222
ELB improved by 0.0622101
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.16
ELB improved by 0.0624993
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.097
ELB improved by 0.0627652
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.034
ELB improved by 0.0629593
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.971
ELB improved by 0.0630585
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.908
ELB improved by 0.0630653
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.845
ELB improved by 0.063001
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.782
ELB improved by 0.0628939
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.719
ELB improved by 0.0627698
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.657
ELB improved by 0.0626461
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.594
ELB improved by 0.062531
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.532
ELB improved by 0.0624257
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.469
ELB improved by 0.0623262
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.407
ELB improved by 0.062226
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.345
ELB improved by 0.062118
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.283
ELB improved by 0.0619955
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.221
ELB improved by 0.0618541
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.16
ELB improved by 0.061693
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.098
ELB improved by 0.0615173
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.037
ELB improved by 0.0613418
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.976
ELB improved by 0.0611975
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.914
ELB improved by 0.061144
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.853
ELB improved by 0.0612927
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.791
ELB improved by 0.0618557
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.728
ELB improved by 0.0632467
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.662
ELB improved by 0.0663055
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.589
ELB improved by 0.0727907
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.502
ELB improved by 0.0863915
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.388
ELB improved by 0.114112
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.224
ELB improved by 0.164448
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.992
ELB improved by 0.231673
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.711
ELB improved by 0.281407
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.416
ELB improved by 0.295226
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.123
ELB improved by 0.292564
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.837
ELB improved by 0.286088
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.559
ELB improved by 0.277837
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.288
ELB improved by 0.271291
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.016
ELB improved by 0.271507
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.734
ELB improved by 0.281887
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.434
ELB improved by 0.300714
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.116
ELB improved by 0.317503
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.799
ELB improved by 0.317707
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.5
ELB improved by 0.298492
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.228
ELB improved by 0.271757
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.979
ELB improved by 0.249031
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.75
ELB improved by 0.229068
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.551
ELB improved by 0.199633
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.394
ELB improved by 0.15671
iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.281
ELB improved by 0.11319
iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.2
ELB improved by 0.0804554
iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.141
ELB improved by 0.0591804
iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.095
ELB improved by 0.0456538
iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.059
ELB improved by 0.0366068
iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.029
ELB improved by 0.0300602
iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.004
ELB improved by 0.0249572
iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.983
ELB improved by 0.0207679
iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.966
ELB improved by 0.017242
iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.951
ELB improved by 0.0142658
iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.94
ELB improved by 0.0117816
iteration 113
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.93
ELB improved by 0.00974491
ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
>
> proc.time()
user system elapsed
2.226 0.240 2.454
graper.Rcheck/graper-Ex.timings
| name | user | system | elapsed | |
| coef.graper | 0.054 | 0.014 | 0.067 | |
| getPIPs | 0.053 | 0.012 | 0.065 | |
| graper | 0.080 | 0.023 | 0.103 | |
| makeExampleData | 0.010 | 0.001 | 0.011 | |
| makeExampleDataWithUnequalGroups | 0.012 | 0.000 | 0.013 | |
| plotELBO | 0.320 | 0.046 | 0.366 | |
| plotGroupPenalties | 1.043 | 0.056 | 1.099 | |
| plotPosterior | 0.603 | 0.021 | 0.624 | |
| predict.graper | 2.045 | 0.080 | 2.126 | |
| print.graper | 0.049 | 0.013 | 0.062 | |