Sergio Oller Moreno
| Snapshot Date: 2026-03-09 13:40 -0400 (Mon, 09 Mar 2026) |
| git_url: https://git.bioconductor.org/packages/AlpsNMR |
| git_branch: devel |
| git_last_commit: 4ce0fcd |
| git_last_commit_date: 2025-10-29 11:04:39 -0400 (Wed, 29 Oct 2025) |
| Back to Multiple platform build/check report for BioC 3.23: simplified long |
|
This page was generated on 2026-03-10 11:33 -0400 (Tue, 10 Mar 2026).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) | x86_64 | R Under development (unstable) (2026-03-05 r89546) -- "Unsuffered Consequences" | 4522 |
| kjohnson3 | macOS 13.7.7 Ventura | arm64 | R Under development (unstable) (2026-03-01 r89506) -- "Unsuffered Consequences" | 2847 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 60/2360 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| AlpsNMR 4.13.0 (landing page) Sergio Oller Moreno
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | | ||||||||
| kjohnson3 | macOS 13.7.7 Ventura / arm64 | OK | ERROR | skipped | skipped | |||||||||
| See other builds for AlpsNMR in R Universe. | ||||||||||||||
|
To the developers/maintainers of the AlpsNMR package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/AlpsNMR.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: AlpsNMR |
| Version: 4.13.0 |
| Command: /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data AlpsNMR |
| StartedAt: 2026-03-09 15:20:54 -0400 (Mon, 09 Mar 2026) |
| EndedAt: 2026-03-09 15:21:19 -0400 (Mon, 09 Mar 2026) |
| EllapsedTime: 24.4 seconds |
| RetCode: 1 |
| Status: ERROR |
| PackageFile: None |
| PackageFileSize: NA |
##############################################################################
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### Running command:
###
### /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data AlpsNMR
###
##############################################################################
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* checking for file ‘AlpsNMR/DESCRIPTION’ ... OK
* preparing ‘AlpsNMR’:
* checking DESCRIPTION meta-information ... OK
* installing the package (it is needed to build vignettes)
* creating vignettes ... ERROR
--- re-building ‘Vig01-introduction-to-alpsnmr.Rmd’ using rmarkdown
Quitting from Vig01-introduction-to-alpsnmr.Rmd:300-309 [unnamed-chunk-20]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error:
! BiocParallel errors
2 remote errors, element index: 1, 3
1 unevaluated and other errors
first remote error:
Error in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]): there is no package called ‘MassSpecWavelet’
---
Backtrace:
x
1. \-AlpsNMR::nmr_detect_peaks(...)
2. +-BiocParallel::bpmapply(...)
3. \-BiocParallel::bpmapply(...)
4. +-BiocParallel::bpmapply(...)
5. \-BiocParallel::bpmapply(...)
6. +-BiocParallel::bplapply(...)
7. \-BiocParallel::bplapply(...)
8. \-BiocParallel:::.bpinit(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'Vig01-introduction-to-alpsnmr.Rmd' failed with diagnostics:
BiocParallel errors
2 remote errors, element index: 1, 3
1 unevaluated and other errors
first remote error:
Error in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]): there is no package called ‘MassSpecWavelet’
--- failed re-building ‘Vig01-introduction-to-alpsnmr.Rmd’
--- re-building ‘Vig01b-introduction-to-alpsnmr-old-api.Rmd’ using rmarkdown
Quitting from Vig01b-introduction-to-alpsnmr-old-api.Rmd:305-313 [unnamed-chunk-18]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error:
! BiocParallel errors
2 remote errors, element index: 1, 3
1 unevaluated and other errors
first remote error:
Error in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]): there is no package called ‘MassSpecWavelet’
---
Backtrace:
x
1. \-AlpsNMR::nmr_detect_peaks(...)
2. +-BiocParallel::bpmapply(...)
3. \-BiocParallel::bpmapply(...)
4. +-BiocParallel::bpmapply(...)
5. \-BiocParallel::bpmapply(...)
6. +-BiocParallel::bplapply(...)
7. \-BiocParallel::bplapply(...)
8. \-BiocParallel:::.bpinit(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'Vig01b-introduction-to-alpsnmr-old-api.Rmd' failed with diagnostics:
BiocParallel errors
2 remote errors, element index: 1, 3
1 unevaluated and other errors
first remote error:
Error in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]): there is no package called ‘MassSpecWavelet’
--- failed re-building ‘Vig01b-introduction-to-alpsnmr-old-api.Rmd’
--- re-building ‘Vig02-handling-metadata-and-annotations.Rmd’ using rmarkdown
Warning: LaTeX Warning: You have requested package `/Library/Frameworks/R.framework/Vers
Warning: ions/4.6/Resources/library/BiocStyle/resources/tex/Bioconductor',
Warning: but the package provides `Bioconductor'.
--- finished re-building ‘Vig02-handling-metadata-and-annotations.Rmd’
SUMMARY: processing the following files failed:
‘Vig01-introduction-to-alpsnmr.Rmd’
‘Vig01b-introduction-to-alpsnmr-old-api.Rmd’
Error: Vignette re-building failed.
Execution halted