Jiri Hon
| Snapshot Date: 2025-10-23 14:17 -0400 (Thu, 23 Oct 2025) |
| git_url: https://git.bioconductor.org/packages/pqsfinder |
| git_branch: devel |
| git_last_commit: 969f685 |
| git_last_commit_date: 2025-04-15 11:01:10 -0400 (Tue, 15 Apr 2025) |
| Back to Multiple platform build/check report for BioC 3.22: simplified long |
|
This page was generated on 2025-10-24 12:07 -0400 (Fri, 24 Oct 2025).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 24.04.3 LTS) | x86_64 | 4.5.1 Patched (2025-08-23 r88802) -- "Great Square Root" | 4898 |
| lconway | macOS 12.7.6 Monterey | x86_64 | 4.5.1 Patched (2025-09-10 r88807) -- "Great Square Root" | 4688 |
| kjohnson3 | macOS 13.7.7 Ventura | arm64 | 4.5.1 Patched (2025-09-10 r88807) -- "Great Square Root" | 4634 |
| taishan | Linux (openEuler 24.03 LTS) | aarch64 | 4.5.0 (2025-04-11) -- "How About a Twenty-Six" | 4658 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 1631/2359 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| pqsfinder 2.25.0 (landing page) Jiri Hon
| nebbiolo2 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | WARNINGS | | ||||||||
| lconway | macOS 12.7.6 Monterey / x86_64 | OK | OK | WARNINGS | OK | | ||||||||
| kjohnson3 | macOS 13.7.7 Ventura / arm64 | OK | OK | WARNINGS | OK | | ||||||||
| taishan | Linux (openEuler 24.03 LTS) / aarch64 | ERROR | ERROR | skipped | ||||||||||
|
To the developers/maintainers of the pqsfinder package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/pqsfinder.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. - See Martin Grigorov's blog post for how to debug Linux ARM64 related issues on a x86_64 host. |
| Package: pqsfinder |
| Version: 2.25.0 |
| Command: /home/biocbuild/R/R/bin/R CMD build --keep-empty-dirs --no-resave-data pqsfinder |
| StartedAt: 2025-10-21 02:08:03 -0000 (Tue, 21 Oct 2025) |
| EndedAt: 2025-10-21 02:08:08 -0000 (Tue, 21 Oct 2025) |
| EllapsedTime: 5.0 seconds |
| RetCode: 1 |
| Status: ERROR |
| PackageFile: None |
| PackageFileSize: NA |
##############################################################################
##############################################################################
###
### Running command:
###
### /home/biocbuild/R/R/bin/R CMD build --keep-empty-dirs --no-resave-data pqsfinder
###
##############################################################################
##############################################################################
* checking for file ‘pqsfinder/DESCRIPTION’ ... OK
* preparing ‘pqsfinder’:
* checking DESCRIPTION meta-information ... OK
* cleaning src
* running ‘cleanup’
* installing the package to build vignettes
-----------------------------------
* installing *source* package ‘pqsfinder’ ...
** this is package ‘pqsfinder’ version ‘2.25.0’
** using staged installation
** libs
using C++ compiler: ‘aarch64-unknown-linux-gnu-g++ (GCC) 14.2.0’
using C++11
/opt/ohpc/pub/compiler/gcc/14.2.0/bin/aarch64-unknown-linux-gnu-g++ -std=gnu++11 -I"/home/biocbuild/R/R-4.5.0/include" -DNDEBUG -I'/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include' -I'/home/biocbuild/R/R-4.5.0/site-library/BH/include' -I/usr/local/include -fPIC -g -O2 -Wall -Werror=format-security -c RcppExports.cpp -o RcppExports.o
In file included from /opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/c++config.h:680,
from /opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/requires_hosted.h:31,
from /opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:41,
from /home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/platform/compiler.h:37,
from /home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/r/headers.h:66,
from /home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/RcppCommon.h:30,
from /home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp.h:27,
from RcppExports.cpp:4:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/os_defines.h:44:19: error: missing binary operator before token "("
44 | #if __GLIBC_PREREQ(2,15) && defined(_GNU_SOURCE)
| ^
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/os_defines.h:55:19: error: missing binary operator before token "("
55 | #if __GLIBC_PREREQ(2, 26) \
| ^
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/os_defines.h:71:20: error: missing binary operator before token "("
71 | # if __GLIBC_PREREQ(2, 27)
| ^
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/os_defines.h:83:20: error: missing binary operator before token "("
83 | # if __GLIBC_PREREQ(2, 34)
| ^
In file included from /usr/include/math.h:27,
from /opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:47:
/usr/include/bits/libc-header-start.h:74:17: error: missing binary operator before token "("
74 | #if __GLIBC_USE (IEC_60559_BFP_EXT) || __GLIBC_USE (ISOC2X)
| ^
/usr/include/bits/libc-header-start.h:80:17: error: missing binary operator before token "("
80 | #if __GLIBC_USE (IEC_60559_BFP_EXT) || defined __STDC_WANT_IEC_60559_EXT__
| ^
/usr/include/bits/libc-header-start.h:97:17: error: missing binary operator before token "("
97 | #if __GLIBC_USE (IEC_60559_FUNCS_EXT) || __GLIBC_USE (ISOC2X)
| ^
In file included from /usr/include/math.h:40:
/usr/include/bits/math-vector.h:28:18: error: missing binary operator before token "("
28 | #if __GNUC_PREREQ(9, 0)
| ^
/usr/include/bits/math-vector.h:32:27: error: missing binary operator before token "("
32 | #elif __glibc_clang_prereq(8, 0)
| ^
/usr/include/bits/math-vector.h:38:18: error: missing binary operator before token "("
38 | #if __GNUC_PREREQ(10, 0) || __glibc_clang_prereq(11, 0)
| ^
In file included from /usr/include/math.h:43:
/opt/ohpc/pub/compiler/gcc/14.2.0/lib/gcc/aarch64-unknown-linux-gnu/14.2.0/include-fixed/bits/floatn.h:67:22: error: missing binary operator before token "("
67 | # if !__GNUC_PREREQ (7, 0) || (defined __cplusplus && !__GNUC_PREREQ (13, 0))
| ^
/opt/ohpc/pub/compiler/gcc/14.2.0/lib/gcc/aarch64-unknown-linux-gnu/14.2.0/include-fixed/bits/floatn.h:77:22: error: missing binary operator before token "("
77 | # if !__GNUC_PREREQ (7, 0) || (defined __cplusplus && !__GNUC_PREREQ (13, 0))
| ^
/opt/ohpc/pub/compiler/gcc/14.2.0/lib/gcc/aarch64-unknown-linux-gnu/14.2.0/include-fixed/bits/floatn.h:88:22: error: missing binary operator before token "("
88 | # if !__GNUC_PREREQ (7, 0) || (defined __cplusplus && !__GNUC_PREREQ (13, 0))
| ^
/opt/ohpc/pub/compiler/gcc/14.2.0/lib/gcc/aarch64-unknown-linux-gnu/14.2.0/include-fixed/bits/floatn.h:93:22: error: missing binary operator before token "("
93 | # if !__GNUC_PREREQ (7, 0)
| ^
In file included from /opt/ohpc/pub/compiler/gcc/14.2.0/lib/gcc/aarch64-unknown-linux-gnu/14.2.0/include-fixed/bits/floatn.h:104:
/opt/ohpc/pub/compiler/gcc/14.2.0/lib/gcc/aarch64-unknown-linux-gnu/14.2.0/include-fixed/bits/floatn-common.h:78:19: error: missing binary operator before token "("
78 | #if __GNUC_PREREQ (7, 0) && !defined __cplusplus
| ^
/opt/ohpc/pub/compiler/gcc/14.2.0/lib/gcc/aarch64-unknown-linux-gnu/14.2.0/include-fixed/bits/floatn-common.h:99:22: error: missing binary operator before token "("
99 | # if !__GNUC_PREREQ (7, 0) || (defined __cplusplus && !__GNUC_PREREQ (13, 0))
| ^
/opt/ohpc/pub/compiler/gcc/14.2.0/lib/gcc/aarch64-unknown-linux-gnu/14.2.0/include-fixed/bits/floatn-common.h:107:22: error: missing binary operator before token "("
107 | # if !__GNUC_PREREQ (7, 0) || (defined __cplusplus && !__GNUC_PREREQ (13, 0))
| ^
/opt/ohpc/pub/compiler/gcc/14.2.0/lib/gcc/aarch64-unknown-linux-gnu/14.2.0/include-fixed/bits/floatn-common.h:119:22: error: missing binary operator before token "("
119 | # if !__GNUC_PREREQ (7, 0) || (defined __cplusplus && !__GNUC_PREREQ (13, 0))
| ^
/opt/ohpc/pub/compiler/gcc/14.2.0/lib/gcc/aarch64-unknown-linux-gnu/14.2.0/include-fixed/bits/floatn-common.h:127:22: error: missing binary operator before token "("
127 | # if !__GNUC_PREREQ (7, 0) || (defined __cplusplus && !__GNUC_PREREQ (13, 0))
| ^
/opt/ohpc/pub/compiler/gcc/14.2.0/lib/gcc/aarch64-unknown-linux-gnu/14.2.0/include-fixed/bits/floatn-common.h:157:22: error: missing binary operator before token "("
157 | # if !__GNUC_PREREQ (7, 0) || (defined __cplusplus && !__GNUC_PREREQ (13, 0))
| ^
/opt/ohpc/pub/compiler/gcc/14.2.0/lib/gcc/aarch64-unknown-linux-gnu/14.2.0/include-fixed/bits/floatn-common.h:165:22: error: missing binary operator before token "("
165 | # if !__GNUC_PREREQ (7, 0) || (defined __cplusplus && !__GNUC_PREREQ (13, 0))
| ^
/opt/ohpc/pub/compiler/gcc/14.2.0/lib/gcc/aarch64-unknown-linux-gnu/14.2.0/include-fixed/bits/floatn-common.h:177:22: error: missing binary operator before token "("
177 | # if !__GNUC_PREREQ (7, 0) || (defined __cplusplus && !__GNUC_PREREQ (13, 0))
| ^
/opt/ohpc/pub/compiler/gcc/14.2.0/lib/gcc/aarch64-unknown-linux-gnu/14.2.0/include-fixed/bits/floatn-common.h:185:22: error: missing binary operator before token "("
185 | # if !__GNUC_PREREQ (7, 0) || (defined __cplusplus && !__GNUC_PREREQ (13, 0))
| ^
/opt/ohpc/pub/compiler/gcc/14.2.0/lib/gcc/aarch64-unknown-linux-gnu/14.2.0/include-fixed/bits/floatn-common.h:222:22: error: missing binary operator before token "("
222 | # if !__GNUC_PREREQ (7, 0) || (defined __cplusplus && !__GNUC_PREREQ (13, 0))
| ^
/opt/ohpc/pub/compiler/gcc/14.2.0/lib/gcc/aarch64-unknown-linux-gnu/14.2.0/include-fixed/bits/floatn-common.h:226:22: error: missing binary operator before token "("
226 | # if !__GNUC_PREREQ (7, 0)
| ^
/opt/ohpc/pub/compiler/gcc/14.2.0/lib/gcc/aarch64-unknown-linux-gnu/14.2.0/include-fixed/bits/floatn-common.h:259:23: error: missing binary operator before token "("
259 | # if !__GNUC_PREREQ (7, 0) || (defined __cplusplus && !__GNUC_PREREQ (13, 0))
| ^
/opt/ohpc/pub/compiler/gcc/14.2.0/lib/gcc/aarch64-unknown-linux-gnu/14.2.0/include-fixed/bits/floatn-common.h:263:23: error: missing binary operator before token "("
263 | # if !__GNUC_PREREQ (7, 0)
| ^
/opt/ohpc/pub/compiler/gcc/14.2.0/lib/gcc/aarch64-unknown-linux-gnu/14.2.0/include-fixed/bits/floatn-common.h:276:22: error: missing binary operator before token "("
276 | # if !__GNUC_PREREQ (7, 0) || (defined __cplusplus && !__GNUC_PREREQ (13, 0))
| ^
/opt/ohpc/pub/compiler/gcc/14.2.0/lib/gcc/aarch64-unknown-linux-gnu/14.2.0/include-fixed/bits/floatn-common.h:280:22: error: missing binary operator before token "("
280 | # if !__GNUC_PREREQ (7, 0)
| ^
/opt/ohpc/pub/compiler/gcc/14.2.0/lib/gcc/aarch64-unknown-linux-gnu/14.2.0/include-fixed/bits/floatn-common.h:293:23: error: missing binary operator before token "("
293 | # if !__GNUC_PREREQ (7, 0) || (defined __cplusplus && !__GNUC_PREREQ (13, 0))
| ^
/opt/ohpc/pub/compiler/gcc/14.2.0/lib/gcc/aarch64-unknown-linux-gnu/14.2.0/include-fixed/bits/floatn-common.h:297:23: error: missing binary operator before token "("
297 | # if !__GNUC_PREREQ (7, 0)
| ^
/usr/include/math.h:47:19: error: missing binary operator before token "("
47 | #if __GNUC_PREREQ (3, 3)
| ^
/usr/include/math.h:66:35: error: missing binary operator before token "("
66 | #if __HAVE_FLOAT16 && __GLIBC_USE (IEC_60559_TYPES_EXT)
| ^
/usr/include/math.h:69:35: error: missing binary operator before token "("
69 | #if __HAVE_FLOAT32 && __GLIBC_USE (IEC_60559_TYPES_EXT)
| ^
/usr/include/math.h:72:35: error: missing binary operator before token "("
72 | #if __HAVE_FLOAT64 && __GLIBC_USE (IEC_60559_TYPES_EXT)
| ^
/usr/include/math.h:75:36: error: missing binary operator before token "("
75 | #if __HAVE_FLOAT128 && __GLIBC_USE (IEC_60559_TYPES_EXT)
| ^
/usr/include/math.h:78:36: error: missing binary operator before token "("
78 | #if __HAVE_FLOAT32X && __GLIBC_USE (IEC_60559_TYPES_EXT)
| ^
/usr/include/math.h:81:36: error: missing binary operator before token "("
81 | #if __HAVE_FLOAT64X && __GLIBC_USE (IEC_60559_TYPES_EXT)
| ^
/usr/include/math.h:84:37: error: missing binary operator before token "("
84 | #if __HAVE_FLOAT128X && __GLIBC_USE (IEC_60559_TYPES_EXT)
| ^
/usr/include/math.h:107:17: error: missing binary operator before token "("
107 | #if __GLIBC_USE (IEC_60559_BFP_EXT)
| ^
/usr/include/math.h:116:21: error: missing binary operator before token "("
116 | && __GLIBC_USE (IEC_60559_TYPES_EXT) \
| ^
/usr/include/math.h:121:21: error: missing binary operator before token "("
121 | && __GLIBC_USE (IEC_60559_TYPES_EXT) \
| ^
/usr/include/math.h:126:21: error: missing binary operator before token "("
126 | && __GLIBC_USE (IEC_60559_TYPES_EXT) \
| ^
/usr/include/math.h:131:21: error: missing binary operator before token "("
131 | && __GLIBC_USE (IEC_60559_TYPES_EXT) \
| ^
/usr/include/math.h:136:21: error: missing binary operator before token "("
136 | && __GLIBC_USE (IEC_60559_TYPES_EXT) \
| ^
/usr/include/math.h:141:21: error: missing binary operator before token "("
141 | && __GLIBC_USE (IEC_60559_TYPES_EXT) \
| ^
/usr/include/math.h:146:21: error: missing binary operator before token "("
146 | && __GLIBC_USE (IEC_60559_TYPES_EXT) \
| ^
/usr/include/math.h:217:17: error: missing binary operator before token "("
217 | #if __GLIBC_USE (IEC_60559_BFP_EXT_C2X)
| ^
/usr/include/math.h:249:17: error: missing binary operator before token "("
249 | #if __GLIBC_USE (IEC_60559_BFP_EXT_C2X)
| ^
In file included from /usr/include/math.h:313:
/usr/include/bits/mathcalls.h:112:17: error: missing binary operator before token "("
112 | #if __GLIBC_USE (IEC_60559_FUNCS_EXT_C2X)
| ^
/usr/include/bits/mathcalls.h:286:17: error: missing binary operator before token "("
286 | #if __GLIBC_USE (IEC_60559_BFP_EXT_C2X) || __MATH_DECLARING_FLOATN
| ^
/usr/include/bits/mathcalls.h:343:17: error: missing binary operator before token "("
343 | #if __GLIBC_USE (IEC_60559_BFP_EXT_C2X) || __MATH_DECLARING_FLOATN
| ^
/usr/include/bits/mathcalls.h:373:18: error: missing binary operator before token "("
373 | #if (__GLIBC_USE (IEC_60559_BFP_EXT) \
| ^
/usr/include/bits/mathcalls.h:383:17: error: missing binary operator before token "("
383 | #if __GLIBC_USE (ISOC2X)
| ^
/usr/include/bits/mathcalls.h:409:17: error: missing binary operator before token "("
409 | #if __GLIBC_USE (IEC_60559_EXT) || __MATH_DECLARING_FLOATN
| ^
/usr/include/math.h:449:18: error: missing binary operator before token "("
449 | # if __GLIBC_USE (IEC_60559_TYPES_EXT)
| ^
/usr/include/math.h:466:18: error: missing binary operator before token "("
466 | # if __GLIBC_USE (IEC_60559_TYPES_EXT)
| ^
/usr/include/math.h:483:18: error: missing binary operator before token "("
483 | # if __GLIBC_USE (IEC_60559_TYPES_EXT)
| ^
/usr/include/math.h:500:18: error: missing binary operator before token "("
500 | # if __GLIBC_USE (IEC_60559_TYPES_EXT)
| ^
/usr/include/math.h:517:18: error: missing binary operator before token "("
517 | # if __GLIBC_USE (IEC_60559_TYPES_EXT)
| ^
/usr/include/math.h:561:17: error: missing binary operator before token "("
561 | #if __GLIBC_USE (IEC_60559_BFP_EXT_C2X)
| ^
/usr/include/math.h:631:17: error: missing binary operator before token "("
631 | #if __GLIBC_USE (IEC_60559_TYPES_EXT)
| ^
/usr/include/math.h:1054:17: error: missing binary operator before token "("
1054 | #if __GLIBC_USE (IEC_60559_BFP_EXT_C2X)
| ^
/usr/include/math.h:1335:17: error: missing binary operator before token "("
1335 | #if __GLIBC_USE (IEC_60559_BFP_EXT_C2X)
| ^
In file included from /usr/include/stdlib.h:26,
from /opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/std_abs.h:38,
from /opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:49:
/usr/include/bits/libc-header-start.h:74:17: error: missing binary operator before token "("
74 | #if __GLIBC_USE (IEC_60559_BFP_EXT) || __GLIBC_USE (ISOC2X)
| ^
/usr/include/bits/libc-header-start.h:80:17: error: missing binary operator before token "("
80 | #if __GLIBC_USE (IEC_60559_BFP_EXT) || defined __STDC_WANT_IEC_60559_EXT__
| ^
/usr/include/bits/libc-header-start.h:97:17: error: missing binary operator before token "("
97 | #if __GLIBC_USE (IEC_60559_FUNCS_EXT) || __GLIBC_USE (ISOC2X)
| ^
/usr/include/stdlib.h:134:35: error: missing binary operator before token "("
134 | #if __HAVE_FLOAT16 && __GLIBC_USE (IEC_60559_TYPES_EXT)
| ^
/usr/include/stdlib.h:140:35: error: missing binary operator before token "("
140 | #if __HAVE_FLOAT32 && __GLIBC_USE (IEC_60559_TYPES_EXT)
| ^
/usr/include/stdlib.h:146:35: error: missing binary operator before token "("
146 | #if __HAVE_FLOAT64 && __GLIBC_USE (IEC_60559_TYPES_EXT)
| ^
/usr/include/stdlib.h:152:36: error: missing binary operator before token "("
152 | #if __HAVE_FLOAT128 && __GLIBC_USE (IEC_60559_TYPES_EXT)
| ^
/usr/include/stdlib.h:158:36: error: missing binary operator before token "("
158 | #if __HAVE_FLOAT32X && __GLIBC_USE (IEC_60559_TYPES_EXT)
| ^
/usr/include/stdlib.h:164:36: error: missing binary operator before token "("
164 | #if __HAVE_FLOAT64X && __GLIBC_USE (IEC_60559_TYPES_EXT)
| ^
/usr/include/stdlib.h:170:37: error: missing binary operator before token "("
170 | #if __HAVE_FLOAT128X && __GLIBC_USE (IEC_60559_TYPES_EXT)
| ^
/usr/include/stdlib.h:213:17: error: missing binary operator before token "("
213 | #if __GLIBC_USE (C2X_STRTOL)
| ^
/usr/include/stdlib.h:277:17: error: missing binary operator before token "("
277 | #if __GLIBC_USE (IEC_60559_BFP_EXT_C2X)
| ^
/usr/include/stdlib.h:291:35: error: missing binary operator before token "("
291 | #if __HAVE_FLOAT16 && __GLIBC_USE (IEC_60559_TYPES_EXT)
| ^
/usr/include/stdlib.h:297:35: error: missing binary operator before token "("
297 | #if __HAVE_FLOAT32 && __GLIBC_USE (IEC_60559_TYPES_EXT)
| ^
/usr/include/stdlib.h:303:35: error: missing binary operator before token "("
303 | #if __HAVE_FLOAT64 && __GLIBC_USE (IEC_60559_TYPES_EXT)
| ^
/usr/include/stdlib.h:309:36: error: missing binary operator before token "("
309 | #if __HAVE_FLOAT128 && __GLIBC_USE (IEC_60559_TYPES_EXT)
| ^
/usr/include/stdlib.h:315:36: error: missing binary operator before token "("
315 | #if __HAVE_FLOAT32X && __GLIBC_USE (IEC_60559_TYPES_EXT)
| ^
/usr/include/stdlib.h:321:36: error: missing binary operator before token "("
321 | #if __HAVE_FLOAT64X && __GLIBC_USE (IEC_60559_TYPES_EXT)
| ^
/usr/include/stdlib.h:327:37: error: missing binary operator before token "("
327 | #if __HAVE_FLOAT128X && __GLIBC_USE (IEC_60559_TYPES_EXT)
| ^
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:1152:7: error: missing binary operator before token "("
1152 | && !_GLIBCXX_NO_OBSOLETE_ISINF_ISNAN_DYNAMIC
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:1179:7: error: missing binary operator before token "("
1179 | && !_GLIBCXX_NO_OBSOLETE_ISINF_ISNAN_DYNAMIC
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/wchar.h:27,
from /opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cwchar:44,
from /opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/postypes.h:40,
from /opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/char_traits.h:42,
from /opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/string:42,
from /home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/macros/macros.h:25,
from /home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/r/headers.h:68:
/usr/include/bits/libc-header-start.h:74:17: error: missing binary operator before token "("
74 | #if __GLIBC_USE (IEC_60559_BFP_EXT) || __GLIBC_USE (ISOC2X)
| ^
/usr/include/bits/libc-header-start.h:80:17: error: missing binary operator before token "("
80 | #if __GLIBC_USE (IEC_60559_BFP_EXT) || defined __STDC_WANT_IEC_60559_EXT__
| ^
/usr/include/bits/libc-header-start.h:97:17: error: missing binary operator before token "("
97 | #if __GLIBC_USE (IEC_60559_FUNCS_EXT) || __GLIBC_USE (ISOC2X)
| ^
/usr/include/wchar.h:64:42: error: missing binary operator before token "("
64 | #if defined __cplusplus && __GNUC_PREREQ (4, 4)
| ^
/usr/include/wchar.h:413:17: error: missing binary operator before token "("
413 | #if __GLIBC_USE (IEC_60559_TYPES_EXT) && __GLIBC_USE (ISOC2X)
| ^
/usr/include/wchar.h:498:17: error: missing binary operator before token "("
498 | #if __GLIBC_USE (C2X_STRTOL)
| ^
/usr/include/wchar.h:702:43: error: missing binary operator before token "("
702 | #if defined __USE_XOPEN2K8 || __GLIBC_USE (LIB_EXT2)
| ^
In file included from /usr/include/stdio.h:27,
from /opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cstdio:42,
from /opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/ext/string_conversions.h:45,
from /opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/basic_string.h:4154,
from /opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/string:54:
/usr/include/bits/libc-header-start.h:74:17: error: missing binary operator before token "("
74 | #if __GLIBC_USE (IEC_60559_BFP_EXT) || __GLIBC_USE (ISOC2X)
| ^
/usr/include/bits/libc-header-start.h:80:17: error: missing binary operator before token "("
80 | #if __GLIBC_USE (IEC_60559_BFP_EXT) || defined __STDC_WANT_IEC_60559_EXT__
| ^
/usr/include/bits/libc-header-start.h:97:17: error: missing binary operator before token "("
97 | #if __GLIBC_USE (IEC_60559_FUNCS_EXT) || __GLIBC_USE (ISOC2X)
| ^
/usr/include/stdio.h:141:17: error: missing binary operator before token "("
141 | #if __GLIBC_USE (ISOC2X)
| ^
/usr/include/stdio.h:311:43: error: missing binary operator before token "("
311 | #if defined __USE_XOPEN2K8 || __GLIBC_USE (LIB_EXT2)
| ^
/usr/include/stdio.h:392:41: error: missing binary operator before token "("
392 | #if defined (__USE_MISC) || __GLIBC_USE (LIB_EXT2)
| ^
/usr/include/stdio.h:436:18: error: missing binary operator before token "("
436 | #if !__GLIBC_USE (DEPRECATED_SCANF) && !defined __LDBL_COMPAT \
| ^
/usr/include/stdio.h:653:17: error: missing binary operator before token "("
653 | #if __GLIBC_USE (DEPRECATED_GETS)
| ^
/usr/include/stdio.h:679:43: error: missing binary operator before token "("
679 | #if defined __USE_XOPEN2K8 || __GLIBC_USE (LIB_EXT2)
| ^
In file included from /usr/include/string.h:26,
from /opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cstring:43,
from /home/biocbuild/R/R-4.5.0/include/R_ext/RS.h:30,
from /home/biocbuild/R/R-4.5.0/include/R.h:78,
from /home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/r/headers.h:70:
/usr/include/bits/libc-header-start.h:74:17: error: missing binary operator before token "("
74 | #if __GLIBC_USE (IEC_60559_BFP_EXT) || __GLIBC_USE (ISOC2X)
| ^
/usr/include/bits/libc-header-start.h:80:17: error: missing binary operator before token "("
80 | #if __GLIBC_USE (IEC_60559_BFP_EXT) || defined __STDC_WANT_IEC_60559_EXT__
| ^
/usr/include/bits/libc-header-start.h:97:17: error: missing binary operator before token "("
97 | #if __GLIBC_USE (IEC_60559_FUNCS_EXT) || __GLIBC_USE (ISOC2X)
| ^
/usr/include/string.h:36:43: error: missing binary operator before token "("
36 | #if defined __cplusplus && (__GNUC_PREREQ (4, 4) \
| ^
/usr/include/string.h:53:62: error: missing binary operator before token "("
53 | #if defined __USE_MISC || defined __USE_XOPEN || __GLIBC_USE (ISOC2X)
| ^
/usr/include/string.h:185:21: error: missing binary operator before token "("
185 | || __GLIBC_USE (LIB_EXT2) || __GLIBC_USE (ISOC2X))
| ^
/usr/include/string.h:194:43: error: missing binary operator before token "("
194 | #if defined __USE_XOPEN2K8 || __GLIBC_USE (LIB_EXT2) || __GLIBC_USE (ISOC2X)
| ^
/usr/include/string.h:545:19: error: missing binary operator before token "("
545 | #if __GNUC_PREREQ (3,4)
| ^
In file included from /usr/include/limits.h:26,
from /opt/ohpc/pub/compiler/gcc/14.2.0/lib/gcc/aarch64-unknown-linux-gnu/14.2.0/include/limits.h:210,
from /opt/ohpc/pub/compiler/gcc/14.2.0/lib/gcc/aarch64-unknown-linux-gnu/14.2.0/include/syslimits.h:7,
from /opt/ohpc/pub/compiler/gcc/14.2.0/lib/gcc/aarch64-unknown-linux-gnu/14.2.0/include/limits.h:34,
from /opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/climits:42,
from /home/biocbuild/R/R-4.5.0/include/Rinternals.h:35,
from /home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/r/headers.h:71:
/usr/include/bits/libc-header-start.h:74:17: error: missing binary operator before token "("
74 | #if __GLIBC_USE (IEC_60559_BFP_EXT) || __GLIBC_USE (ISOC2X)
| ^
/usr/include/bits/libc-header-start.h:80:17: error: missing binary operator before token "("
80 | #if __GLIBC_USE (IEC_60559_BFP_EXT) || defined __STDC_WANT_IEC_60559_EXT__
| ^
/usr/include/bits/libc-header-start.h:97:17: error: missing binary operator before token "("
97 | #if __GLIBC_USE (IEC_60559_FUNCS_EXT) || __GLIBC_USE (ISOC2X)
| ^
/usr/include/limits.h:145:17: error: missing binary operator before token "("
145 | #if __GLIBC_USE (IEC_60559_BFP_EXT_C2X)
| ^
/usr/include/limits.h:184:17: error: missing binary operator before token "("
184 | #if __GLIBC_USE (ISOC2X)
| ^
In file included from /usr/include/sched.h:34,
from /opt/ohpc/pub/compiler/gcc/14.2.0/lib/gcc/aarch64-unknown-linux-gnu/14.2.0/include-fixed/pthread.h:31,
from /opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h:35,
from /opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr.h:157,
from /opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/ext/atomicity.h:35,
from /opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/ios_base.h:39,
from /opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/streambuf:43,
from /opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/streambuf_iterator.h:35,
from /opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/iterator:66,
from /home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/RcppCommon.h:51:
/usr/include/time.h:151:40: error: missing binary operator before token "("
151 | #if defined __USE_POSIX || __GLIBC_USE (ISOC2X)
| ^
/usr/include/time.h:244:39: error: missing binary operator before token "("
244 | #if defined __USE_MISC || __GLIBC_USE (ISOC2X)
| ^
/usr/include/time.h:397:17: error: missing binary operator before token "("
397 | #if __GLIBC_USE (ISOC2X)
| ^
In file included from /usr/include/sched.h:44:
/usr/include/bits/cpu-set.h:45:19: error: missing binary operator before token "("
45 | #if __GNUC_PREREQ (2, 91)
| ^
/usr/include/bits/cpu-set.h:83:19: error: missing binary operator before token "("
83 | #if __GNUC_PREREQ (2, 91)
| ^
/opt/ohpc/pub/compiler/gcc/14.2.0/lib/gcc/aarch64-unknown-linux-gnu/14.2.0/include-fixed/pthread.h:774:19: error: missing binary operator before token "("
774 | #if __GNUC_PREREQ (11, 0)
| ^
In file included from /opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cassert:44,
from /home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/utils/tinyformat/tinyformat.h:137,
from /home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/utils/tinyformat.h:33,
from /home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/RcppCommon.h:77:
/usr/include/assert.h:37:42: error: missing binary operator before token "("
37 | #if defined __cplusplus && __GNUC_PREREQ (2,95)
| ^
/usr/include/assert.h:152:28: error: missing binary operator before token "("
152 | || !__GNUC_PREREQ (13, 0)) \
| ^
In file included from /usr/include/stdint.h:26,
from /opt/ohpc/pub/compiler/gcc/14.2.0/lib/gcc/aarch64-unknown-linux-gnu/14.2.0/include/stdint.h:9,
from /usr/include/inttypes.h:27,
from /home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/hash/hash.h:25,
from /home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/sugar.h:28,
from /home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp.h:79:
/usr/include/bits/libc-header-start.h:74:17: error: missing binary operator before token "("
74 | #if __GLIBC_USE (IEC_60559_BFP_EXT) || __GLIBC_USE (ISOC2X)
| ^
/usr/include/bits/libc-header-start.h:80:17: error: missing binary operator before token "("
80 | #if __GLIBC_USE (IEC_60559_BFP_EXT) || defined __STDC_WANT_IEC_60559_EXT__
| ^
/usr/include/bits/libc-header-start.h:97:17: error: missing binary operator before token "("
97 | #if __GLIBC_USE (IEC_60559_FUNCS_EXT) || __GLIBC_USE (ISOC2X)
| ^
/usr/include/stdint.h:276:17: error: missing binary operator before token "("
276 | #if __GLIBC_USE (IEC_60559_BFP_EXT_C2X)
| ^
/usr/include/inttypes.h:168:18: error: missing binary operator before token "("
168 | # if __GLIBC_USE (ISOC2X)
| ^
/usr/include/inttypes.h:306:18: error: missing binary operator before token "("
306 | # if __GLIBC_USE (ISOC2X)
| ^
/usr/include/inttypes.h:377:17: error: missing binary operator before token "("
377 | #if __GLIBC_USE (C2X_STRTOL)
| ^
/usr/include/math.h:34:1: error: ‘__BEGIN_DECLS’ does not name a type
34 | __BEGIN_DECLS
| ^~~~~~~~~~~~~
/usr/include/bits/mathcalls-helper-functions.h:20:1: error: ‘__fpclassify’ was not declared in this scope
20 | __MATHDECL_ALIAS (int, __fpclassify,, (_Mdouble_ __value), fpclassify)
| ^~~~~~~~~~~~~~~~
/usr/include/bits/mathcalls-helper-functions.h:20:1: error: expected primary-expression before ‘)’ token
20 | __MATHDECL_ALIAS (int, __fpclassify,, (_Mdouble_ __value), fpclassify)
| ^~~~~~~~~~~~~~~~
/usr/include/bits/mathcalls-helper-functions.h:20:1: error: expression list treated as compound expression in initializer [-fpermissive]
/usr/include/bits/mathcalls-helper-functions.h:24:1: error: redefinition of ‘int __CONCAT’
24 | __MATHDECL_ALIAS (int, __signbit,, (_Mdouble_ __value), signbit)
| ^~~~~~~~~~~~~~~~
/usr/include/bits/mathcalls-helper-functions.h:20:1: note: ‘int __CONCAT’ previously defined here
20 | __MATHDECL_ALIAS (int, __fpclassify,, (_Mdouble_ __value), fpclassify)
| ^~~~~~~~~~~~~~~~
/usr/include/bits/mathcalls-helper-functions.h:24:1: error: ‘__signbit’ was not declared in this scope
24 | __MATHDECL_ALIAS (int, __signbit,, (_Mdouble_ __value), signbit)
| ^~~~~~~~~~~~~~~~
/usr/include/bits/mathcalls-helper-functions.h:24:1: error: expected primary-expression before ‘)’ token
24 | __MATHDECL_ALIAS (int, __signbit,, (_Mdouble_ __value), signbit)
| ^~~~~~~~~~~~~~~~
/usr/include/bits/mathcalls-helper-functions.h:29:1: error: redefinition of ‘int __CONCAT’
29 | __MATHDECL_ALIAS (int, __isinf,, (_Mdouble_ __value), isinf)
| ^~~~~~~~~~~~~~~~
/usr/include/bits/mathcalls-helper-functions.h:20:1: note: ‘int __CONCAT’ previously defined here
20 | __MATHDECL_ALIAS (int, __fpclassify,, (_Mdouble_ __value), fpclassify)
| ^~~~~~~~~~~~~~~~
/usr/include/bits/mathcalls-helper-functions.h:29:1: error: ‘__isinf’ was not declared in this scope
29 | __MATHDECL_ALIAS (int, __isinf,, (_Mdouble_ __value), isinf)
| ^~~~~~~~~~~~~~~~
/usr/include/bits/mathcalls-helper-functions.h:29:1: error: expected primary-expression before ‘)’ token
29 | __MATHDECL_ALIAS (int, __isinf,, (_Mdouble_ __value), isinf)
| ^~~~~~~~~~~~~~~~
/usr/include/bits/mathcalls-helper-functions.h:33:1: error: redefinition of ‘int __CONCAT’
33 | __MATHDECL_ALIAS (int, __finite,, (_Mdouble_ __value), finite)
| ^~~~~~~~~~~~~~~~
/usr/include/bits/mathcalls-helper-functions.h:20:1: note: ‘int __CONCAT’ previously defined here
20 | __MATHDECL_ALIAS (int, __fpclassify,, (_Mdouble_ __value), fpclassify)
| ^~~~~~~~~~~~~~~~
/usr/include/bits/mathcalls-helper-functions.h:33:1: error: ‘__finite’ was not declared in this scope
33 | __MATHDECL_ALIAS (int, __finite,, (_Mdouble_ __value), finite)
| ^~~~~~~~~~~~~~~~
/usr/include/bits/mathcalls-helper-functions.h:33:1: error: expected primary-expression before ‘)’ token
33 | __MATHDECL_ALIAS (int, __finite,, (_Mdouble_ __value), finite)
| ^~~~~~~~~~~~~~~~
/usr/include/bits/mathcalls-helper-functions.h:37:1: error: redefinition of ‘int __CONCAT’
37 | __MATHDECL_ALIAS (int, __isnan,, (_Mdouble_ __value), isnan)
| ^~~~~~~~~~~~~~~~
/usr/include/bits/mathcalls-helper-functions.h:20:1: note: ‘int __CONCAT’ previously defined here
20 | __MATHDECL_ALIAS (int, __fpclassify,, (_Mdouble_ __value), fpclassify)
| ^~~~~~~~~~~~~~~~
/usr/include/bits/mathcalls-helper-functions.h:37:1: error: ‘__isnan’ was not declared in this scope
37 | __MATHDECL_ALIAS (int, __isnan,, (_Mdouble_ __value), isnan)
| ^~~~~~~~~~~~~~~~
/usr/include/bits/mathcalls-helper-functions.h:37:1: error: expected primary-expression before ‘)’ token
37 | __MATHDECL_ALIAS (int, __isnan,, (_Mdouble_ __value), isnan)
| ^~~~~~~~~~~~~~~~
/usr/include/bits/mathcalls-helper-functions.h:41:1: error: redefinition of ‘int __CONCAT’
41 | __MATHDECL_ALIAS (int, __iseqsig,, (_Mdouble_ __x, _Mdouble_ __y), iseqsig);
| ^~~~~~~~~~~~~~~~
/usr/include/bits/mathcalls-helper-functions.h:20:1: note: ‘int __CONCAT’ previously defined here
20 | __MATHDECL_ALIAS (int, __fpclassify,, (_Mdouble_ __value), fpclassify)
| ^~~~~~~~~~~~~~~~
/usr/include/bits/mathcalls-helper-functions.h:41:1: error: ‘__iseqsig’ was not declared in this scope
41 | __MATHDECL_ALIAS (int, __iseqsig,, (_Mdouble_ __x, _Mdouble_ __y), iseqsig);
| ^~~~~~~~~~~~~~~~
/usr/include/bits/mathcalls-helper-functions.h:41:1: error: expected primary-expression before ‘)’ token
41 | __MATHDECL_ALIAS (int, __iseqsig,, (_Mdouble_ __x, _Mdouble_ __y), iseqsig);
| ^~~~~~~~~~~~~~~~
/usr/include/bits/mathcalls-helper-functions.h:44:1: error: redefinition of ‘int __CONCAT’
44 | __MATHDECL_ALIAS (int, __issignaling,, (_Mdouble_ __value), issignaling)
| ^~~~~~~~~~~~~~~~
/usr/include/bits/mathcalls-helper-functions.h:20:1: note: ‘int __CONCAT’ previously defined here
20 | __MATHDECL_ALIAS (int, __fpclassify,, (_Mdouble_ __value), fpclassify)
| ^~~~~~~~~~~~~~~~
/usr/include/bits/mathcalls-helper-functions.h:44:1: error: ‘__issignaling’ was not declared in this scope
44 | __MATHDECL_ALIAS (int, __issignaling,, (_Mdouble_ __value), issignaling)
| ^~~~~~~~~~~~~~~~
/usr/include/bits/mathcalls-helper-functions.h:44:1: error: expected primary-expression before ‘)’ token
44 | __MATHDECL_ALIAS (int, __issignaling,, (_Mdouble_ __value), issignaling)
| ^~~~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:53:1: error: expected constructor, destructor, or type conversion before ‘(’ token
53 | __MATHCALL_VEC (acos,, (_Mdouble_ __x));
| ^~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:53:1: error: conflicting declaration ‘double __CONCAT’
53 | __MATHCALL_VEC (acos,, (_Mdouble_ __x));
| ^~~~~~~~~~~~~~
/usr/include/bits/mathcalls-helper-functions.h:20:1: note: previous declaration as ‘int __CONCAT’
20 | __MATHDECL_ALIAS (int, __fpclassify,, (_Mdouble_ __value), fpclassify)
| ^~~~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:53:1: error: ‘__’ was not declared in this scope
53 | __MATHCALL_VEC (acos,, (_Mdouble_ __x));
| ^~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:53:1: error: ‘acos’ was not declared in this scope
53 | __MATHCALL_VEC (acos,, (_Mdouble_ __x));
| ^~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:53:1: error: ‘__CONCAT’ cannot be used as a function
53 | __MATHCALL_VEC (acos,, (_Mdouble_ __x));
| ^~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:53:1: error: expected primary-expression before ‘)’ token
53 | __MATHCALL_VEC (acos,, (_Mdouble_ __x));
| ^~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:55:1: error: expected constructor, destructor, or type conversion before ‘(’ token
55 | __MATHCALL_VEC (asin,, (_Mdouble_ __x));
| ^~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:55:1: error: conflicting declaration ‘double __CONCAT’
55 | __MATHCALL_VEC (asin,, (_Mdouble_ __x));
| ^~~~~~~~~~~~~~
/usr/include/bits/mathcalls-helper-functions.h:20:1: note: previous declaration as ‘int __CONCAT’
20 | __MATHDECL_ALIAS (int, __fpclassify,, (_Mdouble_ __value), fpclassify)
| ^~~~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:55:1: error: ‘__’ was not declared in this scope
55 | __MATHCALL_VEC (asin,, (_Mdouble_ __x));
| ^~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:55:1: error: ‘asin’ was not declared in this scope
55 | __MATHCALL_VEC (asin,, (_Mdouble_ __x));
| ^~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:55:1: error: ‘__CONCAT’ cannot be used as a function
55 | __MATHCALL_VEC (asin,, (_Mdouble_ __x));
| ^~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:55:1: error: expected primary-expression before ‘)’ token
55 | __MATHCALL_VEC (asin,, (_Mdouble_ __x));
| ^~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:57:1: error: expected constructor, destructor, or type conversion before ‘(’ token
57 | __MATHCALL_VEC (atan,, (_Mdouble_ __x));
| ^~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:57:1: error: conflicting declaration ‘double __CONCAT’
57 | __MATHCALL_VEC (atan,, (_Mdouble_ __x));
| ^~~~~~~~~~~~~~
/usr/include/bits/mathcalls-helper-functions.h:20:1: note: previous declaration as ‘int __CONCAT’
20 | __MATHDECL_ALIAS (int, __fpclassify,, (_Mdouble_ __value), fpclassify)
| ^~~~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:57:1: error: ‘__’ was not declared in this scope
57 | __MATHCALL_VEC (atan,, (_Mdouble_ __x));
| ^~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:57:1: error: ‘atan’ was not declared in this scope
57 | __MATHCALL_VEC (atan,, (_Mdouble_ __x));
| ^~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:57:1: error: ‘__CONCAT’ cannot be used as a function
57 | __MATHCALL_VEC (atan,, (_Mdouble_ __x));
| ^~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:57:1: error: expected primary-expression before ‘)’ token
57 | __MATHCALL_VEC (atan,, (_Mdouble_ __x));
| ^~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:59:1: error: expected constructor, destructor, or type conversion before ‘(’ token
59 | __MATHCALL_VEC (atan2,, (_Mdouble_ __y, _Mdouble_ __x));
| ^~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:59:1: error: conflicting declaration ‘double __CONCAT’
59 | __MATHCALL_VEC (atan2,, (_Mdouble_ __y, _Mdouble_ __x));
| ^~~~~~~~~~~~~~
/usr/include/bits/mathcalls-helper-functions.h:20:1: note: previous declaration as ‘int __CONCAT’
20 | __MATHDECL_ALIAS (int, __fpclassify,, (_Mdouble_ __value), fpclassify)
| ^~~~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:59:1: error: ‘__’ was not declared in this scope
59 | __MATHCALL_VEC (atan2,, (_Mdouble_ __y, _Mdouble_ __x));
| ^~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:59:1: error: ‘atan2’ was not declared in this scope
59 | __MATHCALL_VEC (atan2,, (_Mdouble_ __y, _Mdouble_ __x));
| ^~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:59:1: error: ‘__CONCAT’ cannot be used as a function
59 | __MATHCALL_VEC (atan2,, (_Mdouble_ __y, _Mdouble_ __x));
| ^~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:59:1: error: expected primary-expression before ‘)’ token
59 | __MATHCALL_VEC (atan2,, (_Mdouble_ __y, _Mdouble_ __x));
| ^~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:62:1: error: expected constructor, destructor, or type conversion before ‘(’ token
62 | __MATHCALL_VEC (cos,, (_Mdouble_ __x));
| ^~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:62:1: error: conflicting declaration ‘double __CONCAT’
62 | __MATHCALL_VEC (cos,, (_Mdouble_ __x));
| ^~~~~~~~~~~~~~
/usr/include/bits/mathcalls-helper-functions.h:20:1: note: previous declaration as ‘int __CONCAT’
20 | __MATHDECL_ALIAS (int, __fpclassify,, (_Mdouble_ __value), fpclassify)
| ^~~~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:62:1: error: ‘__’ was not declared in this scope
62 | __MATHCALL_VEC (cos,, (_Mdouble_ __x));
| ^~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:62:1: error: ‘cos’ was not declared in this scope; did you mean ‘const’?
62 | __MATHCALL_VEC (cos,, (_Mdouble_ __x));
| ^~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:62:1: error: ‘__CONCAT’ cannot be used as a function
62 | __MATHCALL_VEC (cos,, (_Mdouble_ __x));
| ^~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:62:1: error: expected primary-expression before ‘)’ token
62 | __MATHCALL_VEC (cos,, (_Mdouble_ __x));
| ^~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:64:1: error: expected constructor, destructor, or type conversion before ‘(’ token
64 | __MATHCALL_VEC (sin,, (_Mdouble_ __x));
| ^~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:64:1: error: conflicting declaration ‘double __CONCAT’
64 | __MATHCALL_VEC (sin,, (_Mdouble_ __x));
| ^~~~~~~~~~~~~~
/usr/include/bits/mathcalls-helper-functions.h:20:1: note: previous declaration as ‘int __CONCAT’
20 | __MATHDECL_ALIAS (int, __fpclassify,, (_Mdouble_ __value), fpclassify)
| ^~~~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:64:1: error: ‘__’ was not declared in this scope
64 | __MATHCALL_VEC (sin,, (_Mdouble_ __x));
| ^~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:64:1: error: ‘sin’ was not declared in this scope
64 | __MATHCALL_VEC (sin,, (_Mdouble_ __x));
| ^~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:64:1: error: ‘__CONCAT’ cannot be used as a function
64 | __MATHCALL_VEC (sin,, (_Mdouble_ __x));
| ^~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:64:1: error: expected primary-expression before ‘)’ token
64 | __MATHCALL_VEC (sin,, (_Mdouble_ __x));
| ^~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:66:1: error: expected constructor, destructor, or type conversion before ‘(’ token
66 | __MATHCALL_VEC (tan,, (_Mdouble_ __x));
| ^~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:66:1: error: conflicting declaration ‘double __CONCAT’
66 | __MATHCALL_VEC (tan,, (_Mdouble_ __x));
| ^~~~~~~~~~~~~~
/usr/include/bits/mathcalls-helper-functions.h:20:1: note: previous declaration as ‘int __CONCAT’
20 | __MATHDECL_ALIAS (int, __fpclassify,, (_Mdouble_ __value), fpclassify)
| ^~~~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:66:1: error: ‘__’ was not declared in this scope
66 | __MATHCALL_VEC (tan,, (_Mdouble_ __x));
| ^~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:66:1: error: ‘tan’ was not declared in this scope
66 | __MATHCALL_VEC (tan,, (_Mdouble_ __x));
| ^~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:66:1: error: ‘__CONCAT’ cannot be used as a function
66 | __MATHCALL_VEC (tan,, (_Mdouble_ __x));
| ^~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:66:1: error: expected primary-expression before ‘)’ token
66 | __MATHCALL_VEC (tan,, (_Mdouble_ __x));
| ^~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:71:1: error: expected constructor, destructor, or type conversion before ‘(’ token
71 | __MATHCALL_VEC (cosh,, (_Mdouble_ __x));
| ^~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:71:1: error: conflicting declaration ‘double __CONCAT’
71 | __MATHCALL_VEC (cosh,, (_Mdouble_ __x));
| ^~~~~~~~~~~~~~
/usr/include/bits/mathcalls-helper-functions.h:20:1: note: previous declaration as ‘int __CONCAT’
20 | __MATHDECL_ALIAS (int, __fpclassify,, (_Mdouble_ __value), fpclassify)
| ^~~~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:71:1: error: ‘__’ was not declared in this scope
71 | __MATHCALL_VEC (cosh,, (_Mdouble_ __x));
| ^~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:71:1: error: ‘cosh’ was not declared in this scope
71 | __MATHCALL_VEC (cosh,, (_Mdouble_ __x));
| ^~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:71:1: error: ‘__CONCAT’ cannot be used as a function
71 | __MATHCALL_VEC (cosh,, (_Mdouble_ __x));
| ^~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:71:1: error: expected primary-expression before ‘)’ token
71 | __MATHCALL_VEC (cosh,, (_Mdouble_ __x));
| ^~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:73:1: error: expected constructor, destructor, or type conversion before ‘(’ token
73 | __MATHCALL_VEC (sinh,, (_Mdouble_ __x));
| ^~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:73:1: error: conflicting declaration ‘double __CONCAT’
73 | __MATHCALL_VEC (sinh,, (_Mdouble_ __x));
| ^~~~~~~~~~~~~~
/usr/include/bits/mathcalls-helper-functions.h:20:1: note: previous declaration as ‘int __CONCAT’
20 | __MATHDECL_ALIAS (int, __fpclassify,, (_Mdouble_ __value), fpclassify)
| ^~~~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:73:1: error: ‘__’ was not declared in this scope
73 | __MATHCALL_VEC (sinh,, (_Mdouble_ __x));
| ^~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:73:1: error: ‘sinh’ was not declared in this scope
73 | __MATHCALL_VEC (sinh,, (_Mdouble_ __x));
| ^~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:73:1: error: ‘__CONCAT’ cannot be used as a function
73 | __MATHCALL_VEC (sinh,, (_Mdouble_ __x));
| ^~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:73:1: error: expected primary-expression before ‘)’ token
73 | __MATHCALL_VEC (sinh,, (_Mdouble_ __x));
| ^~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:75:1: error: expected constructor, destructor, or type conversion before ‘(’ token
75 | __MATHCALL_VEC (tanh,, (_Mdouble_ __x));
| ^~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:75:1: error: conflicting declaration ‘double __CONCAT’
75 | __MATHCALL_VEC (tanh,, (_Mdouble_ __x));
| ^~~~~~~~~~~~~~
/usr/include/bits/mathcalls-helper-functions.h:20:1: note: previous declaration as ‘int __CONCAT’
20 | __MATHDECL_ALIAS (int, __fpclassify,, (_Mdouble_ __value), fpclassify)
| ^~~~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:75:1: error: ‘__’ was not declared in this scope
75 | __MATHCALL_VEC (tanh,, (_Mdouble_ __x));
| ^~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:75:1: error: ‘tanh’ was not declared in this scope
75 | __MATHCALL_VEC (tanh,, (_Mdouble_ __x));
| ^~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:75:1: error: ‘__CONCAT’ cannot be used as a function
75 | __MATHCALL_VEC (tanh,, (_Mdouble_ __x));
| ^~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:75:1: error: expected primary-expression before ‘)’ token
75 | __MATHCALL_VEC (tanh,, (_Mdouble_ __x));
| ^~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:95:1: error: expected constructor, destructor, or type conversion before ‘(’ token
95 | __MATHCALL_VEC (exp,, (_Mdouble_ __x));
| ^~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:95:1: error: conflicting declaration ‘double __CONCAT’
95 | __MATHCALL_VEC (exp,, (_Mdouble_ __x));
| ^~~~~~~~~~~~~~
/usr/include/bits/mathcalls-helper-functions.h:20:1: note: previous declaration as ‘int __CONCAT’
20 | __MATHDECL_ALIAS (int, __fpclassify,, (_Mdouble_ __value), fpclassify)
| ^~~~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:95:1: error: ‘__’ was not declared in this scope
95 | __MATHCALL_VEC (exp,, (_Mdouble_ __x));
| ^~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:95:1: error: ‘exp’ was not declared in this scope
95 | __MATHCALL_VEC (exp,, (_Mdouble_ __x));
| ^~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:95:1: error: ‘__CONCAT’ cannot be used as a function
95 | __MATHCALL_VEC (exp,, (_Mdouble_ __x));
| ^~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:95:1: error: expected primary-expression before ‘)’ token
95 | __MATHCALL_VEC (exp,, (_Mdouble_ __x));
| ^~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:98:1: error: conflicting declaration ‘double __CONCAT’
98 | __MATHCALL (frexp,, (_Mdouble_ __x, int *__exponent));
| ^~~~~~~~~~
/usr/include/bits/mathcalls-helper-functions.h:20:1: note: previous declaration as ‘int __CONCAT’
20 | __MATHDECL_ALIAS (int, __fpclassify,, (_Mdouble_ __value), fpclassify)
| ^~~~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:98:1: error: ‘frexp’ was not declared in this scope
98 | __MATHCALL (frexp,, (_Mdouble_ __x, int *__exponent));
| ^~~~~~~~~~
/usr/include/bits/mathcalls.h:98:1: error: expected primary-expression before ‘)’ token
98 | __MATHCALL (frexp,, (_Mdouble_ __x, int *__exponent));
| ^~~~~~~~~~
/usr/include/bits/mathcalls.h:98:1: error: conflicting declaration ‘double __CONCAT’
98 | __MATHCALL (frexp,, (_Mdouble_ __x, int *__exponent));
| ^~~~~~~~~~
/usr/include/bits/mathcalls-helper-functions.h:20:1: note: previous declaration as ‘int __CONCAT’
20 | __MATHDECL_ALIAS (int, __fpclassify,, (_Mdouble_ __value), fpclassify)
| ^~~~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:98:1: error: ‘__’ was not declared in this scope
98 | __MATHCALL (frexp,, (_Mdouble_ __x, int *__exponent));
| ^~~~~~~~~~
/usr/include/bits/mathcalls.h:98:1: error: ‘frexp’ was not declared in this scope
98 | __MATHCALL (frexp,, (_Mdouble_ __x, int *__exponent));
| ^~~~~~~~~~
/usr/include/bits/mathcalls.h:98:1: error: ‘__CONCAT’ cannot be used as a function
98 | __MATHCALL (frexp,, (_Mdouble_ __x, int *__exponent));
| ^~~~~~~~~~
/usr/include/bits/mathcalls.h:98:1: error: expected primary-expression before ‘)’ token
98 | __MATHCALL (frexp,, (_Mdouble_ __x, int *__exponent));
| ^~~~~~~~~~
/usr/include/bits/mathcalls.h:101:1: error: conflicting declaration ‘double __CONCAT’
101 | __MATHCALL (ldexp,, (_Mdouble_ __x, int __exponent));
| ^~~~~~~~~~
/usr/include/bits/mathcalls-helper-functions.h:20:1: note: previous declaration as ‘int __CONCAT’
20 | __MATHDECL_ALIAS (int, __fpclassify,, (_Mdouble_ __value), fpclassify)
| ^~~~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:101:1: error: ‘ldexp’ was not declared in this scope
101 | __MATHCALL (ldexp,, (_Mdouble_ __x, int __exponent));
| ^~~~~~~~~~
/usr/include/bits/mathcalls.h:101:1: error: expected primary-expression before ‘)’ token
101 | __MATHCALL (ldexp,, (_Mdouble_ __x, int __exponent));
| ^~~~~~~~~~
/usr/include/bits/mathcalls.h:101:1: error: conflicting declaration ‘double __CONCAT’
101 | __MATHCALL (ldexp,, (_Mdouble_ __x, int __exponent));
| ^~~~~~~~~~
/usr/include/bits/mathcalls-helper-functions.h:20:1: note: previous declaration as ‘int __CONCAT’
20 | __MATHDECL_ALIAS (int, __fpclassify,, (_Mdouble_ __value), fpclassify)
| ^~~~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:101:1: error: ‘__’ was not declared in this scope
101 | __MATHCALL (ldexp,, (_Mdouble_ __x, int __exponent));
| ^~~~~~~~~~
/usr/include/bits/mathcalls.h:101:1: error: ‘ldexp’ was not declared in this scope
101 | __MATHCALL (ldexp,, (_Mdouble_ __x, int __exponent));
| ^~~~~~~~~~
/usr/include/bits/mathcalls.h:101:1: error: ‘__CONCAT’ cannot be used as a function
101 | __MATHCALL (ldexp,, (_Mdouble_ __x, int __exponent));
| ^~~~~~~~~~
/usr/include/bits/mathcalls.h:101:1: error: expected primary-expression before ‘)’ token
101 | __MATHCALL (ldexp,, (_Mdouble_ __x, int __exponent));
| ^~~~~~~~~~
/usr/include/bits/mathcalls.h:104:1: error: expected constructor, destructor, or type conversion before ‘(’ token
104 | __MATHCALL_VEC (log,, (_Mdouble_ __x));
| ^~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:104:1: error: conflicting declaration ‘double __CONCAT’
104 | __MATHCALL_VEC (log,, (_Mdouble_ __x));
| ^~~~~~~~~~~~~~
/usr/include/bits/mathcalls-helper-functions.h:20:1: note: previous declaration as ‘int __CONCAT’
20 | __MATHDECL_ALIAS (int, __fpclassify,, (_Mdouble_ __value), fpclassify)
| ^~~~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:104:1: error: ‘__’ was not declared in this scope
104 | __MATHCALL_VEC (log,, (_Mdouble_ __x));
| ^~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:104:1: error: ‘log’ was not declared in this scope; did you mean ‘long’?
104 | __MATHCALL_VEC (log,, (_Mdouble_ __x));
| ^~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:104:1: error: ‘__CONCAT’ cannot be used as a function
104 | __MATHCALL_VEC (log,, (_Mdouble_ __x));
| ^~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:104:1: error: expected primary-expression before ‘)’ token
104 | __MATHCALL_VEC (log,, (_Mdouble_ __x));
| ^~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:107:1: error: expected constructor, destructor, or type conversion before ‘(’ token
107 | __MATHCALL_VEC (log10,, (_Mdouble_ __x));
| ^~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:107:1: error: conflicting declaration ‘double __CONCAT’
107 | __MATHCALL_VEC (log10,, (_Mdouble_ __x));
| ^~~~~~~~~~~~~~
/usr/include/bits/mathcalls-helper-functions.h:20:1: note: previous declaration as ‘int __CONCAT’
20 | __MATHDECL_ALIAS (int, __fpclassify,, (_Mdouble_ __value), fpclassify)
| ^~~~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:107:1: error: ‘__’ was not declared in this scope
107 | __MATHCALL_VEC (log10,, (_Mdouble_ __x));
| ^~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:107:1: error: ‘log10’ was not declared in this scope
107 | __MATHCALL_VEC (log10,, (_Mdouble_ __x));
| ^~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:107:1: error: ‘__CONCAT’ cannot be used as a function
107 | __MATHCALL_VEC (log10,, (_Mdouble_ __x));
| ^~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:107:1: error: expected primary-expression before ‘)’ token
107 | __MATHCALL_VEC (log10,, (_Mdouble_ __x));
| ^~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:110:1: error: conflicting declaration ‘double __CONCAT’
110 | __MATHCALL (modf,, (_Mdouble_ __x, _Mdouble_ *__iptr)) __nonnull ((2));
| ^~~~~~~~~~
/usr/include/bits/mathcalls-helper-functions.h:20:1: note: previous declaration as ‘int __CONCAT’
20 | __MATHDECL_ALIAS (int, __fpclassify,, (_Mdouble_ __value), fpclassify)
| ^~~~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:110:1: error: ‘modf’ was not declared in this scope
110 | __MATHCALL (modf,, (_Mdouble_ __x, _Mdouble_ *__iptr)) __nonnull ((2));
| ^~~~~~~~~~
/usr/include/bits/mathcalls.h:110:1: error: expected primary-expression before ‘)’ token
110 | __MATHCALL (modf,, (_Mdouble_ __x, _Mdouble_ *__iptr)) __nonnull ((2));
| ^~~~~~~~~~
/usr/include/bits/mathcalls.h:110:1: error: conflicting declaration ‘double __CONCAT’
110 | __MATHCALL (modf,, (_Mdouble_ __x, _Mdouble_ *__iptr)) __nonnull ((2));
| ^~~~~~~~~~
/usr/include/bits/mathcalls-helper-functions.h:20:1: note: previous declaration as ‘int __CONCAT’
20 | __MATHDECL_ALIAS (int, __fpclassify,, (_Mdouble_ __value), fpclassify)
| ^~~~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:110:1: error: ‘__’ was not declared in this scope
110 | __MATHCALL (modf,, (_Mdouble_ __x, _Mdouble_ *__iptr)) __nonnull ((2));
| ^~~~~~~~~~
/usr/include/bits/mathcalls.h:110:1: error: ‘modf’ was not declared in this scope
110 | __MATHCALL (modf,, (_Mdouble_ __x, _Mdouble_ *__iptr)) __nonnull ((2));
| ^~~~~~~~~~
/usr/include/bits/mathcalls.h:110:1: error: ‘__CONCAT’ cannot be used as a function
110 | __MATHCALL (modf,, (_Mdouble_ __x, _Mdouble_ *__iptr)) __nonnull ((2));
| ^~~~~~~~~~
/usr/include/bits/mathcalls.h:110:1: error: expected primary-expression before ‘)’ token
110 | __MATHCALL (modf,, (_Mdouble_ __x, _Mdouble_ *__iptr)) __nonnull ((2));
| ^~~~~~~~~~
/usr/include/bits/mathcalls.h:140:1: error: expected constructor, destructor, or type conversion before ‘(’ token
140 | __MATHCALL_VEC (pow,, (_Mdouble_ __x, _Mdouble_ __y));
| ^~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:140:1: error: conflicting declaration ‘double __CONCAT’
140 | __MATHCALL_VEC (pow,, (_Mdouble_ __x, _Mdouble_ __y));
| ^~~~~~~~~~~~~~
/usr/include/bits/mathcalls-helper-functions.h:20:1: note: previous declaration as ‘int __CONCAT’
20 | __MATHDECL_ALIAS (int, __fpclassify,, (_Mdouble_ __value), fpclassify)
| ^~~~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:140:1: error: ‘__’ was not declared in this scope
140 | __MATHCALL_VEC (pow,, (_Mdouble_ __x, _Mdouble_ __y));
| ^~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:140:1: error: ‘pow’ was not declared in this scope; did you mean ‘pow1p’?
140 | __MATHCALL_VEC (pow,, (_Mdouble_ __x, _Mdouble_ __y));
| ^~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:140:1: error: ‘__CONCAT’ cannot be used as a function
140 | __MATHCALL_VEC (pow,, (_Mdouble_ __x, _Mdouble_ __y));
| ^~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:140:1: error: expected primary-expression before ‘)’ token
140 | __MATHCALL_VEC (pow,, (_Mdouble_ __x, _Mdouble_ __y));
| ^~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:143:1: error: conflicting declaration ‘double __CONCAT’
143 | __MATHCALL (sqrt,, (_Mdouble_ __x));
| ^~~~~~~~~~
/usr/include/bits/mathcalls-helper-functions.h:20:1: note: previous declaration as ‘int __CONCAT’
20 | __MATHDECL_ALIAS (int, __fpclassify,, (_Mdouble_ __value), fpclassify)
| ^~~~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:143:1: error: ‘sqrt’ was not declared in this scope
143 | __MATHCALL (sqrt,, (_Mdouble_ __x));
| ^~~~~~~~~~
/usr/include/bits/mathcalls.h:143:1: error: expected primary-expression before ‘)’ token
143 | __MATHCALL (sqrt,, (_Mdouble_ __x));
| ^~~~~~~~~~
/usr/include/bits/mathcalls.h:143:1: error: conflicting declaration ‘double __CONCAT’
143 | __MATHCALL (sqrt,, (_Mdouble_ __x));
| ^~~~~~~~~~
/usr/include/bits/mathcalls-helper-functions.h:20:1: note: previous declaration as ‘int __CONCAT’
20 | __MATHDECL_ALIAS (int, __fpclassify,, (_Mdouble_ __value), fpclassify)
| ^~~~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:143:1: error: ‘__’ was not declared in this scope
143 | __MATHCALL (sqrt,, (_Mdouble_ __x));
| ^~~~~~~~~~
/usr/include/bits/mathcalls.h:143:1: error: ‘sqrt’ was not declared in this scope
143 | __MATHCALL (sqrt,, (_Mdouble_ __x));
| ^~~~~~~~~~
/usr/include/bits/mathcalls.h:143:1: error: ‘__CONCAT’ cannot be used as a function
143 | __MATHCALL (sqrt,, (_Mdouble_ __x));
| ^~~~~~~~~~
/usr/include/bits/mathcalls.h:143:1: error: expected primary-expression before ‘)’ token
143 | __MATHCALL (sqrt,, (_Mdouble_ __x));
| ^~~~~~~~~~
/usr/include/bits/mathcalls.h:159:1: error: conflicting declaration ‘double __CONCAT’
159 | __MATHCALLX (ceil,, (_Mdouble_ __x), (__const__));
| ^~~~~~~~~~~
/usr/include/bits/mathcalls-helper-functions.h:20:1: note: previous declaration as ‘int __CONCAT’
20 | __MATHDECL_ALIAS (int, __fpclassify,, (_Mdouble_ __value), fpclassify)
| ^~~~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:159:1: error: ‘ceil’ was not declared in this scope
159 | __MATHCALLX (ceil,, (_Mdouble_ __x), (__const__));
| ^~~~~~~~~~~
/usr/include/bits/mathcalls.h:159:1: error: expected primary-expression before ‘)’ token
159 | __MATHCALLX (ceil,, (_Mdouble_ __x), (__const__));
| ^~~~~~~~~~~
/usr/include/bits/mathcalls.h:159:1: error: conflicting declaration ‘double __CONCAT’
159 | __MATHCALLX (ceil,, (_Mdouble_ __x), (__const__));
| ^~~~~~~~~~~
/usr/include/bits/mathcalls-helper-functions.h:20:1: note: previous declaration as ‘int __CONCAT’
20 | __MATHDECL_ALIAS (int, __fpclassify,, (_Mdouble_ __value), fpclassify)
| ^~~~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:159:1: error: ‘__’ was not declared in this scope
159 | __MATHCALLX (ceil,, (_Mdouble_ __x), (__const__));
| ^~~~~~~~~~~
/usr/include/bits/mathcalls.h:159:1: error: ‘ceil’ was not declared in this scope
159 | __MATHCALLX (ceil,, (_Mdouble_ __x), (__const__));
| ^~~~~~~~~~~
/usr/include/bits/mathcalls.h:159:1: error: ‘__CONCAT’ cannot be used as a function
159 | __MATHCALLX (ceil,, (_Mdouble_ __x), (__const__));
| ^~~~~~~~~~~
/usr/include/bits/mathcalls.h:159:1: error: expected primary-expression before ‘)’ token
159 | __MATHCALLX (ceil,, (_Mdouble_ __x), (__const__));
| ^~~~~~~~~~~
/usr/include/bits/mathcalls.h:162:1: error: conflicting declaration ‘double __CONCAT’
162 | __MATHCALLX (fabs,, (_Mdouble_ __x), (__const__));
| ^~~~~~~~~~~
/usr/include/bits/mathcalls-helper-functions.h:20:1: note: previous declaration as ‘int __CONCAT’
20 | __MATHDECL_ALIAS (int, __fpclassify,, (_Mdouble_ __value), fpclassify)
| ^~~~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:162:1: error: ‘fabs’ was not declared in this scope
162 | __MATHCALLX (fabs,, (_Mdouble_ __x), (__const__));
| ^~~~~~~~~~~
/usr/include/bits/mathcalls.h:162:1: error: expected primary-expression before ‘)’ token
162 | __MATHCALLX (fabs,, (_Mdouble_ __x), (__const__));
| ^~~~~~~~~~~
/usr/include/bits/mathcalls.h:162:1: error: conflicting declaration ‘double __CONCAT’
162 | __MATHCALLX (fabs,, (_Mdouble_ __x), (__const__));
| ^~~~~~~~~~~
/usr/include/bits/mathcalls-helper-functions.h:20:1: note: previous declaration as ‘int __CONCAT’
20 | __MATHDECL_ALIAS (int, __fpclassify,, (_Mdouble_ __value), fpclassify)
| ^~~~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:162:1: error: ‘__’ was not declared in this scope
162 | __MATHCALLX (fabs,, (_Mdouble_ __x), (__const__));
| ^~~~~~~~~~~
/usr/include/bits/mathcalls.h:162:1: error: ‘fabs’ was not declared in this scope
162 | __MATHCALLX (fabs,, (_Mdouble_ __x), (__const__));
| ^~~~~~~~~~~
/usr/include/bits/mathcalls.h:162:1: error: ‘__CONCAT’ cannot be used as a function
162 | __MATHCALLX (fabs,, (_Mdouble_ __x), (__const__));
| ^~~~~~~~~~~
/usr/include/bits/mathcalls.h:162:1: error: expected primary-expression before ‘)’ token
162 | __MATHCALLX (fabs,, (_Mdouble_ __x), (__const__));
| ^~~~~~~~~~~
/usr/include/bits/mathcalls.h:165:1: error: conflicting declaration ‘double __CONCAT’
165 | __MATHCALLX (floor,, (_Mdouble_ __x), (__const__));
| ^~~~~~~~~~~
/usr/include/bits/mathcalls-helper-functions.h:20:1: note: previous declaration as ‘int __CONCAT’
20 | __MATHDECL_ALIAS (int, __fpclassify,, (_Mdouble_ __value), fpclassify)
| ^~~~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:165:1: error: ‘floor’ was not declared in this scope
165 | __MATHCALLX (floor,, (_Mdouble_ __x), (__const__));
| ^~~~~~~~~~~
/usr/include/bits/mathcalls.h:165:1: error: expected primary-expression before ‘)’ token
165 | __MATHCALLX (floor,, (_Mdouble_ __x), (__const__));
| ^~~~~~~~~~~
/usr/include/bits/mathcalls.h:165:1: error: conflicting declaration ‘double __CONCAT’
165 | __MATHCALLX (floor,, (_Mdouble_ __x), (__const__));
| ^~~~~~~~~~~
/usr/include/bits/mathcalls-helper-functions.h:20:1: note: previous declaration as ‘int __CONCAT’
20 | __MATHDECL_ALIAS (int, __fpclassify,, (_Mdouble_ __value), fpclassify)
| ^~~~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:165:1: error: ‘__’ was not declared in this scope
165 | __MATHCALLX (floor,, (_Mdouble_ __x), (__const__));
| ^~~~~~~~~~~
/usr/include/bits/mathcalls.h:165:1: error: ‘floor’ was not declared in this scope
165 | __MATHCALLX (floor,, (_Mdouble_ __x), (__const__));
| ^~~~~~~~~~~
/usr/include/bits/mathcalls.h:165:1: error: ‘__CONCAT’ cannot be used as a function
165 | __MATHCALLX (floor,, (_Mdouble_ __x), (__const__));
| ^~~~~~~~~~~
/usr/include/bits/mathcalls.h:165:1: error: expected primary-expression before ‘)’ token
165 | __MATHCALLX (floor,, (_Mdouble_ __x), (__const__));
| ^~~~~~~~~~~
/usr/include/bits/mathcalls.h:168:1: error: conflicting declaration ‘double __CONCAT’
168 | __MATHCALL (fmod,, (_Mdouble_ __x, _Mdouble_ __y));
| ^~~~~~~~~~
/usr/include/bits/mathcalls-helper-functions.h:20:1: note: previous declaration as ‘int __CONCAT’
20 | __MATHDECL_ALIAS (int, __fpclassify,, (_Mdouble_ __value), fpclassify)
| ^~~~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:168:1: error: ‘fmod’ was not declared in this scope
168 | __MATHCALL (fmod,, (_Mdouble_ __x, _Mdouble_ __y));
| ^~~~~~~~~~
/usr/include/bits/mathcalls.h:168:1: error: expected primary-expression before ‘)’ token
168 | __MATHCALL (fmod,, (_Mdouble_ __x, _Mdouble_ __y));
| ^~~~~~~~~~
/usr/include/bits/mathcalls.h:168:1: error: conflicting declaration ‘double __CONCAT’
168 | __MATHCALL (fmod,, (_Mdouble_ __x, _Mdouble_ __y));
| ^~~~~~~~~~
/usr/include/bits/mathcalls-helper-functions.h:20:1: note: previous declaration as ‘int __CONCAT’
20 | __MATHDECL_ALIAS (int, __fpclassify,, (_Mdouble_ __value), fpclassify)
| ^~~~~~~~~~~~~~~~
/usr/include/bits/mathcalls.h:168:1: error: ‘__’ was not declared in this scope
168 | __MATHCALL (fmod,, (_Mdouble_ __x, _Mdouble_ __y));
| ^~~~~~~~~~
/usr/include/bits/mathcalls.h:168:1: error: ‘fmod’ was not declared in this scope
168 | __MATHCALL (fmod,, (_Mdouble_ __x, _Mdouble_ __y));
| ^~~~~~~~~~
/usr/include/bits/mathcalls.h:168:1: error: ‘__CONCAT’ cannot be used as a function
168 | __MATHCALL (fmod,, (_Mdouble_ __x, _Mdouble_ __y));
| ^~~~~~~~~~
/usr/include/bits/mathcalls.h:168:1: error: expected primary-expression before ‘)’ token
168 | __MATHCALL (fmod,, (_Mdouble_ __x, _Mdouble_ __y));
| ^~~~~~~~~~
/usr/include/math.h:1472:1: error: ‘__END_DECLS’ does not name a type
1472 | __END_DECLS
| ^~~~~~~~~~~
/usr/include/stdlib.h:34:1: error: ‘__BEGIN_DECLS’ does not name a type
34 | __BEGIN_DECLS
| ^~~~~~~~~~~~~
/usr/include/stdlib.h:63:5: error: ‘div_t’ does not name a type
63 | } div_t;
| ^~~~~
/usr/include/stdlib.h:98:8: error: ‘size_t’ does not name a type
98 | extern size_t __ctype_get_mb_cur_max (void) __THROW __wur;
| ^~~~~~
/usr/include/stdlib.h:33:1: note: ‘size_t’ is defined in header ‘<cstddef>’; this is probably fixable by adding ‘#include <cstddef>’
32 | #include <stddef.h>
+++ |+#include <cstddef>
33 |
/usr/include/stdlib.h:103:6: error: expected initializer before ‘__THROW’
103 | __THROW __attribute_pure__ __nonnull ((1)) __wur;
| ^~~~~~~
/usr/include/stdlib.h:106:6: error: expected initializer before ‘__THROW’
106 | __THROW __attribute_pure__ __nonnull ((1)) __wur;
| ^~~~~~~
/usr/include/stdlib.h:109:6: error: expected initializer before ‘__THROW’
109 | __THROW __attribute_pure__ __nonnull ((1)) __wur;
| ^~~~~~~
/usr/include/stdlib.h:120:6: error: expected initializer before ‘__THROW’
120 | __THROW __nonnull ((1));
| ^~~~~~~
/usr/include/stdlib.h:179:6: error: expected initializer before ‘__THROW’
179 | __THROW __nonnull ((1));
| ^~~~~~~
/usr/include/stdlib.h:183:6: error: expected initializer before ‘__THROW’
183 | __THROW __nonnull ((1));
| ^~~~~~~
/usr/include/stdlib.h:573:24: error: expected initializer before ‘__THROW’
573 | extern int rand (void) __THROW;
| ^~~~~~~
/usr/include/stdlib.h:575:41: error: expected initializer before ‘__THROW’
575 | extern void srand (unsigned int __seed) __THROW;
| ^~~~~~~
/usr/include/stdlib.h:672:22: error: ‘size_t’ was not declared in this scope; did you mean ‘std::size_t’?
672 | extern void *malloc (size_t __size) __THROW __attribute_malloc__
| ^~~~~~
| std::size_t
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/c++config.h:310:33: note: ‘std::size_t’ declared here
310 | typedef __SIZE_TYPE__ size_t;
| ^~~~~~
/usr/include/stdlib.h:675:22: error: ‘size_t’ was not declared in this scope; did you mean ‘std::size_t’?
675 | extern void *calloc (size_t __nmemb, size_t __size)
| ^~~~~~
| std::size_t
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/c++config.h:310:33: note: ‘std::size_t’ declared here
310 | typedef __SIZE_TYPE__ size_t;
| ^~~~~~
/usr/include/stdlib.h:675:38: error: ‘size_t’ was not declared in this scope; did you mean ‘std::size_t’?
675 | extern void *calloc (size_t __nmemb, size_t __size)
| ^~~~~~
| std::size_t
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/c++config.h:310:33: note: ‘std::size_t’ declared here
310 | typedef __SIZE_TYPE__ size_t;
| ^~~~~~
/usr/include/stdlib.h:675:51: error: expression list treated as compound expression in initializer [-fpermissive]
675 | extern void *calloc (size_t __nmemb, size_t __size)
| ^
/usr/include/stdlib.h:683:36: error: ‘size_t’ has not been declared
683 | extern void *realloc (void *__ptr, size_t __size)
| ^~~~~~
/usr/include/stdlib.h:684:6: error: expected initializer before ‘__THROW’
684 | __THROW __attribute_warn_unused_result__ __attribute_alloc_size__ ((2));
| ^~~~~~~
/usr/include/stdlib.h:687:32: error: expected initializer before ‘__THROW’
687 | extern void free (void *__ptr) __THROW;
| ^~~~~~~
/usr/include/stdlib.h:730:26: error: expected initializer before ‘__THROW’
730 | extern void abort (void) __THROW __attribute__ ((__noreturn__));
| ^~~~~~~
/usr/include/stdlib.h:734:43: error: expected initializer before ‘__THROW’
734 | extern int atexit (void (*__func) (void)) __THROW __nonnull ((1));
| ^~~~~~~
/usr/include/stdlib.h:756:33: error: expected initializer before ‘__THROW’
756 | extern void exit (int __status) __THROW __attribute__ ((__noreturn__));
| ^~~~~~~
/usr/include/stdlib.h:773:42: error: expected initializer before ‘__THROW’
773 | extern char *getenv (const char *__name) __THROW __nonnull ((1)) __wur;
| ^~~~~~~
/usr/include/stdlib.h:923:43: error: expected initializer before ‘__wur’
923 | extern int system (const char *__command) __wur;
| ^~~~~
/usr/include/stdlib.h:961:23: error: ‘size_t’ has not been declared
961 | size_t __nmemb, size_t __size, __compar_fn_t __compar)
| ^~~~~~
/usr/include/stdlib.h:961:39: error: ‘size_t’ has not been declared
961 | size_t __nmemb, size_t __size, __compar_fn_t __compar)
| ^~~~~~
/usr/include/stdlib.h:962:6: error: expected initializer before ‘__nonnull’
962 | __nonnull ((1, 2, 5)) __wur;
| ^~~~~~~~~
/usr/include/stdlib.h:970:34: error: ‘size_t’ has not been declared
970 | extern void qsort (void *__base, size_t __nmemb, size_t __size,
| ^~~~~~
/usr/include/stdlib.h:970:50: error: ‘size_t’ has not been declared
970 | extern void qsort (void *__base, size_t __nmemb, size_t __size,
| ^~~~~~
/usr/include/stdlib.h:971:44: error: expected initializer before ‘__nonnull’
971 | __compar_fn_t __compar) __nonnull ((1, 4));
| ^~~~~~~~~
/usr/include/stdlib.h:980:26: error: expected initializer before ‘__THROW’
980 | extern int abs (int __x) __THROW __attribute__ ((__const__)) __wur;
| ^~~~~~~
/usr/include/stdlib.h:981:37: error: expected initializer before ‘__THROW’
981 | extern long int labs (long int __x) __THROW __attribute__ ((__const__)) __wur;
| ^~~~~~~
/usr/include/stdlib.h:992:8: error: ‘div_t’ does not name a type; did you mean ‘ldiv_t’?
992 | extern div_t div (int __numer, int __denom)
| ^~~~~
| ldiv_t
/usr/include/stdlib.h:995:6: error: expected initializer before ‘__THROW’
995 | __THROW __attribute__ ((__const__)) __wur;
| ^~~~~~~
/usr/include/stdlib.h:1062:36: error: ‘size_t’ has not been declared
1062 | extern int mblen (const char *__s, size_t __n) __THROW;
| ^~~~~~
/usr/include/stdlib.h:1062:48: error: expected initializer before ‘__THROW’
1062 | extern int mblen (const char *__s, size_t __n) __THROW;
| ^~~~~~~
/usr/include/stdlib.h:1066:48: error: ‘size_t’ has not been declared
1066 | const char *__restrict __s, size_t __n) __THROW;
| ^~~~~~
/usr/include/stdlib.h:1066:60: error: expected initializer before ‘__THROW’
1066 | const char *__restrict __s, size_t __n) __THROW;
| ^~~~~~~
/usr/include/stdlib.h:1069:48: error: expected initializer before ‘__THROW’
1069 | extern int wctomb (char *__s, wchar_t __wchar) __THROW;
| ^~~~~~~
/usr/include/stdlib.h:1073:8: error: ‘size_t’ does not name a type
1073 | extern size_t mbstowcs (wchar_t *__restrict __pwcs,
| ^~~~~~
/usr/include/stdlib.h:1073:8: note: ‘size_t’ is defined in header ‘<cstddef>’; this is probably fixable by adding ‘#include <cstddef>’
/usr/include/stdlib.h:1077:8: error: ‘size_t’ does not name a type
1077 | extern size_t wcstombs (char *__restrict __s,
| ^~~~~~
/usr/include/stdlib.h:1077:8: note: ‘size_t’ is defined in header ‘<cstddef>’; this is probably fixable by adding ‘#include <cstddef>’
/usr/include/stdlib.h:1167:1: error: ‘__END_DECLS’ does not name a type
1167 | __END_DECLS
| ^~~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:89:11: error: ‘acos’ has not been declared in ‘::’
89 | using ::acos;
| ^~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:108:11: error: ‘asin’ has not been declared in ‘::’
108 | using ::asin;
| ^~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:127:11: error: ‘atan’ has not been declared in ‘::’
127 | using ::atan;
| ^~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:146:11: error: ‘atan2’ has not been declared in ‘::’
146 | using ::atan2;
| ^~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:158:11: error: ‘ceil’ has not been declared in ‘::’
158 | using ::ceil;
| ^~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:177:11: error: ‘cos’ has not been declared in ‘::’
177 | using ::cos;
| ^~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:196:11: error: ‘cosh’ has not been declared in ‘::’
196 | using ::cosh;
| ^~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:215:11: error: ‘exp’ has not been declared in ‘::’
215 | using ::exp;
| ^~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:234:11: error: ‘fabs’ has not been declared in ‘::’
234 | using ::fabs;
| ^~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:253:11: error: ‘floor’ has not been declared in ‘::’
253 | using ::floor;
| ^~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:272:11: error: ‘fmod’ has not been declared in ‘::’
272 | using ::fmod;
| ^~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:284:11: error: ‘frexp’ has not been declared in ‘::’
284 | using ::frexp;
| ^~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:303:11: error: ‘ldexp’ has not been declared in ‘::’
303 | using ::ldexp;
| ^~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:322:11: error: ‘log’ has not been declared in ‘::’
322 | using ::log;
| ^~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:341:11: error: ‘log10’ has not been declared in ‘::’
341 | using ::log10;
| ^~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:360:11: error: ‘modf’ has not been declared in ‘::’
360 | using ::modf;
| ^~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:372:11: error: ‘pow’ has not been declared in ‘::’
372 | using ::pow;
| ^~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:400:11: error: ‘sin’ has not been declared in ‘::’
400 | using ::sin;
| ^~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:419:11: error: ‘sinh’ has not been declared in ‘::’
419 | using ::sinh;
| ^~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:438:11: error: ‘sqrt’ has not been declared in ‘::’
438 | using ::sqrt;
| ^~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:457:11: error: ‘tan’ has not been declared in ‘::’
457 | using ::tan;
| ^~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:476:11: error: ‘tanh’ has not been declared in ‘::’
476 | using ::tanh;
| ^~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath: In function ‘constexpr int std::fpclassify(float)’:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:1102:33: error: ‘FP_NAN’ was not declared in this scope; did you mean ‘ML_NAN’?
1102 | { return __builtin_fpclassify(FP_NAN, FP_INFINITE, FP_NORMAL,
| ^~~~~~
| ML_NAN
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:1102:41: error: ‘FP_INFINITE’ was not declared in this scope; did you mean ‘R_FINITE’?
1102 | { return __builtin_fpclassify(FP_NAN, FP_INFINITE, FP_NORMAL,
| ^~~~~~~~~~~
| R_FINITE
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:1102:54: error: ‘FP_NORMAL’ was not declared in this scope
1102 | { return __builtin_fpclassify(FP_NAN, FP_INFINITE, FP_NORMAL,
| ^~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:1103:33: error: ‘FP_SUBNORMAL’ was not declared in this scope
1103 | FP_SUBNORMAL, FP_ZERO, __x); }
| ^~~~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:1103:47: error: ‘FP_ZERO’ was not declared in this scope
1103 | FP_SUBNORMAL, FP_ZERO, __x); }
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:1103:62: error: body of ‘constexpr’ function ‘constexpr int std::fpclassify(float)’ not a return-statement
1103 | FP_SUBNORMAL, FP_ZERO, __x); }
| ^
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath: In function ‘constexpr int std::fpclassify(double)’:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:1107:33: error: ‘FP_NAN’ was not declared in this scope; did you mean ‘ML_NAN’?
1107 | { return __builtin_fpclassify(FP_NAN, FP_INFINITE, FP_NORMAL,
| ^~~~~~
| ML_NAN
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:1107:41: error: ‘FP_INFINITE’ was not declared in this scope; did you mean ‘R_FINITE’?
1107 | { return __builtin_fpclassify(FP_NAN, FP_INFINITE, FP_NORMAL,
| ^~~~~~~~~~~
| R_FINITE
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:1107:54: error: ‘FP_NORMAL’ was not declared in this scope
1107 | { return __builtin_fpclassify(FP_NAN, FP_INFINITE, FP_NORMAL,
| ^~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:1108:33: error: ‘FP_SUBNORMAL’ was not declared in this scope
1108 | FP_SUBNORMAL, FP_ZERO, __x); }
| ^~~~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:1108:47: error: ‘FP_ZERO’ was not declared in this scope
1108 | FP_SUBNORMAL, FP_ZERO, __x); }
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:1108:62: error: body of ‘constexpr’ function ‘constexpr int std::fpclassify(double)’ not a return-statement
1108 | FP_SUBNORMAL, FP_ZERO, __x); }
| ^
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath: In function ‘constexpr int std::fpclassify(long double)’:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:1112:33: error: ‘FP_NAN’ was not declared in this scope; did you mean ‘ML_NAN’?
1112 | { return __builtin_fpclassify(FP_NAN, FP_INFINITE, FP_NORMAL,
| ^~~~~~
| ML_NAN
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:1112:41: error: ‘FP_INFINITE’ was not declared in this scope; did you mean ‘R_FINITE’?
1112 | { return __builtin_fpclassify(FP_NAN, FP_INFINITE, FP_NORMAL,
| ^~~~~~~~~~~
| R_FINITE
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:1112:54: error: ‘FP_NORMAL’ was not declared in this scope
1112 | { return __builtin_fpclassify(FP_NAN, FP_INFINITE, FP_NORMAL,
| ^~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:1113:33: error: ‘FP_SUBNORMAL’ was not declared in this scope
1113 | FP_SUBNORMAL, FP_ZERO, __x); }
| ^~~~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:1113:47: error: ‘FP_ZERO’ was not declared in this scope
1113 | FP_SUBNORMAL, FP_ZERO, __x); }
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:1113:62: error: body of ‘constexpr’ function ‘constexpr int std::fpclassify(long double)’ not a return-statement
1113 | FP_SUBNORMAL, FP_ZERO, __x); }
| ^
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath: In function ‘constexpr typename __gnu_cxx::__enable_if<std::__is_integer<_Tp>::__value, int>::__type std::fpclassify(_Tp)’:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:1121:25: error: ‘FP_NORMAL’ was not declared in this scope
1121 | { return __x != 0 ? FP_NORMAL : FP_ZERO; }
| ^~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:1121:37: error: ‘FP_ZERO’ was not declared in this scope
1121 | { return __x != 0 ? FP_NORMAL : FP_ZERO; }
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath: At global scope:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:1820:11: error: ‘acosf’ has not been declared in ‘::’
1820 | using ::acosf;
| ^~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:1823:11: error: ‘acosl’ has not been declared in ‘::’
1823 | using ::acosl;
| ^~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:1827:11: error: ‘asinf’ has not been declared in ‘::’
1827 | using ::asinf;
| ^~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:1830:11: error: ‘asinl’ has not been declared in ‘::’
1830 | using ::asinl;
| ^~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:1834:11: error: ‘atanf’ has not been declared in ‘::’
1834 | using ::atanf;
| ^~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:1837:11: error: ‘atanl’ has not been declared in ‘::’
1837 | using ::atanl;
| ^~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:1841:11: error: ‘atan2f’ has not been declared in ‘::’
1841 | using ::atan2f;
| ^~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:1844:11: error: ‘atan2l’ has not been declared in ‘::’
1844 | using ::atan2l;
| ^~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:1848:11: error: ‘ceilf’ has not been declared in ‘::’
1848 | using ::ceilf;
| ^~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:1851:11: error: ‘ceill’ has not been declared in ‘::’
1851 | using ::ceill;
| ^~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:1855:11: error: ‘cosf’ has not been declared in ‘::’
1855 | using ::cosf;
| ^~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:1858:11: error: ‘cosl’ has not been declared in ‘::’
1858 | using ::cosl;
| ^~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:1862:11: error: ‘coshf’ has not been declared in ‘::’
1862 | using ::coshf;
| ^~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:1865:11: error: ‘coshl’ has not been declared in ‘::’
1865 | using ::coshl;
| ^~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:1869:11: error: ‘expf’ has not been declared in ‘::’
1869 | using ::expf;
| ^~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:1872:11: error: ‘expl’ has not been declared in ‘::’
1872 | using ::expl;
| ^~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:1876:11: error: ‘fabsf’ has not been declared in ‘::’
1876 | using ::fabsf;
| ^~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:1879:11: error: ‘fabsl’ has not been declared in ‘::’
1879 | using ::fabsl;
| ^~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:1883:11: error: ‘floorf’ has not been declared in ‘::’
1883 | using ::floorf;
| ^~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:1886:11: error: ‘floorl’ has not been declared in ‘::’
1886 | using ::floorl;
| ^~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:1890:11: error: ‘fmodf’ has not been declared in ‘::’
1890 | using ::fmodf;
| ^~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:1893:11: error: ‘fmodl’ has not been declared in ‘::’
1893 | using ::fmodl;
| ^~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:1897:11: error: ‘frexpf’ has not been declared in ‘::’
1897 | using ::frexpf;
| ^~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:1900:11: error: ‘frexpl’ has not been declared in ‘::’
1900 | using ::frexpl;
| ^~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:1904:11: error: ‘ldexpf’ has not been declared in ‘::’
1904 | using ::ldexpf;
| ^~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:1907:11: error: ‘ldexpl’ has not been declared in ‘::’
1907 | using ::ldexpl;
| ^~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:1911:11: error: ‘logf’ has not been declared in ‘::’
1911 | using ::logf;
| ^~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:1914:11: error: ‘logl’ has not been declared in ‘::’
1914 | using ::logl;
| ^~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:1918:11: error: ‘log10f’ has not been declared in ‘::’
1918 | using ::log10f;
| ^~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:1921:11: error: ‘log10l’ has not been declared in ‘::’
1921 | using ::log10l;
| ^~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:1925:11: error: ‘modff’ has not been declared in ‘::’
1925 | using ::modff;
| ^~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:1928:11: error: ‘modfl’ has not been declared in ‘::’
1928 | using ::modfl;
| ^~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:1932:11: error: ‘powf’ has not been declared in ‘::’
1932 | using ::powf;
| ^~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:1935:11: error: ‘powl’ has not been declared in ‘::’
1935 | using ::powl;
| ^~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:1939:11: error: ‘sinf’ has not been declared in ‘::’
1939 | using ::sinf;
| ^~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:1942:11: error: ‘sinl’ has not been declared in ‘::’
1942 | using ::sinl;
| ^~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:1946:11: error: ‘sinhf’ has not been declared in ‘::’
1946 | using ::sinhf;
| ^~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:1949:11: error: ‘sinhl’ has not been declared in ‘::’
1949 | using ::sinhl;
| ^~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:1953:11: error: ‘sqrtf’ has not been declared in ‘::’
1953 | using ::sqrtf;
| ^~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:1956:11: error: ‘sqrtl’ has not been declared in ‘::’
1956 | using ::sqrtl;
| ^~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:1960:11: error: ‘tanf’ has not been declared in ‘::’
1960 | using ::tanf;
| ^~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:1963:11: error: ‘tanl’ has not been declared in ‘::’
1963 | using ::tanl;
| ^~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:1967:11: error: ‘tanhf’ has not been declared in ‘::’
1967 | using ::tanhf;
| ^~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:1970:11: error: ‘tanhl’ has not been declared in ‘::’
1970 | using ::tanhl;
| ^~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2085:11: error: ‘double_t’ has not been declared in ‘::’
2085 | using ::double_t;
| ^~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2086:11: error: ‘float_t’ has not been declared in ‘::’
2086 | using ::float_t;
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2090:11: error: ‘acosh’ has not been declared in ‘::’
2090 | using ::acosh;
| ^~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2091:11: error: ‘acoshf’ has not been declared in ‘::’
2091 | using ::acoshf;
| ^~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2092:11: error: ‘acoshl’ has not been declared in ‘::’
2092 | using ::acoshl;
| ^~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2094:11: error: ‘asinh’ has not been declared in ‘::’
2094 | using ::asinh;
| ^~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2095:11: error: ‘asinhf’ has not been declared in ‘::’
2095 | using ::asinhf;
| ^~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2096:11: error: ‘asinhl’ has not been declared in ‘::’
2096 | using ::asinhl;
| ^~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2098:11: error: ‘atanh’ has not been declared in ‘::’
2098 | using ::atanh;
| ^~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2099:11: error: ‘atanhf’ has not been declared in ‘::’
2099 | using ::atanhf;
| ^~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2100:11: error: ‘atanhl’ has not been declared in ‘::’
2100 | using ::atanhl;
| ^~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2102:11: error: ‘cbrt’ has not been declared in ‘::’
2102 | using ::cbrt;
| ^~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2103:11: error: ‘cbrtf’ has not been declared in ‘::’
2103 | using ::cbrtf;
| ^~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2104:11: error: ‘cbrtl’ has not been declared in ‘::’
2104 | using ::cbrtl;
| ^~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2106:11: error: ‘copysign’ has not been declared in ‘::’
2106 | using ::copysign;
| ^~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2107:11: error: ‘copysignf’ has not been declared in ‘::’
2107 | using ::copysignf;
| ^~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2108:11: error: ‘copysignl’ has not been declared in ‘::’
2108 | using ::copysignl;
| ^~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2110:11: error: ‘erf’ has not been declared in ‘::’
2110 | using ::erf;
| ^~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2111:11: error: ‘erff’ has not been declared in ‘::’
2111 | using ::erff;
| ^~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2112:11: error: ‘erfl’ has not been declared in ‘::’
2112 | using ::erfl;
| ^~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2114:11: error: ‘erfc’ has not been declared in ‘::’
2114 | using ::erfc;
| ^~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2115:11: error: ‘erfcf’ has not been declared in ‘::’
2115 | using ::erfcf;
| ^~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2116:11: error: ‘erfcl’ has not been declared in ‘::’
2116 | using ::erfcl;
| ^~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2118:11: error: ‘exp2’ has not been declared in ‘::’
2118 | using ::exp2;
| ^~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2119:11: error: ‘exp2f’ has not been declared in ‘::’
2119 | using ::exp2f;
| ^~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2120:11: error: ‘exp2l’ has not been declared in ‘::’
2120 | using ::exp2l;
| ^~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2122:11: error: ‘expm1’ has not been declared in ‘::’
2122 | using ::expm1;
| ^~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2123:11: error: ‘expm1f’ has not been declared in ‘::’
2123 | using ::expm1f;
| ^~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2124:11: error: ‘expm1l’ has not been declared in ‘::’
2124 | using ::expm1l;
| ^~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2126:11: error: ‘fdim’ has not been declared in ‘::’
2126 | using ::fdim;
| ^~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2127:11: error: ‘fdimf’ has not been declared in ‘::’
2127 | using ::fdimf;
| ^~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2128:11: error: ‘fdiml’ has not been declared in ‘::’
2128 | using ::fdiml;
| ^~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2130:11: error: ‘fma’ has not been declared in ‘::’
2130 | using ::fma;
| ^~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2131:11: error: ‘fmaf’ has not been declared in ‘::’
2131 | using ::fmaf;
| ^~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2132:11: error: ‘fmal’ has not been declared in ‘::’
2132 | using ::fmal;
| ^~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2134:11: error: ‘fmax’ has not been declared in ‘::’
2134 | using ::fmax;
| ^~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2135:11: error: ‘fmaxf’ has not been declared in ‘::’
2135 | using ::fmaxf;
| ^~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2136:11: error: ‘fmaxl’ has not been declared in ‘::’
2136 | using ::fmaxl;
| ^~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2138:11: error: ‘fmin’ has not been declared in ‘::’
2138 | using ::fmin;
| ^~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2139:11: error: ‘fminf’ has not been declared in ‘::’
2139 | using ::fminf;
| ^~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2140:11: error: ‘fminl’ has not been declared in ‘::’
2140 | using ::fminl;
| ^~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2142:11: error: ‘hypot’ has not been declared in ‘::’
2142 | using ::hypot;
| ^~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2143:11: error: ‘hypotf’ has not been declared in ‘::’
2143 | using ::hypotf;
| ^~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2144:11: error: ‘hypotl’ has not been declared in ‘::’
2144 | using ::hypotl;
| ^~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2146:11: error: ‘ilogb’ has not been declared in ‘::’
2146 | using ::ilogb;
| ^~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2147:11: error: ‘ilogbf’ has not been declared in ‘::’
2147 | using ::ilogbf;
| ^~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2148:11: error: ‘ilogbl’ has not been declared in ‘::’
2148 | using ::ilogbl;
| ^~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2150:11: error: ‘lgamma’ has not been declared in ‘::’
2150 | using ::lgamma;
| ^~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2151:11: error: ‘lgammaf’ has not been declared in ‘::’
2151 | using ::lgammaf;
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2152:11: error: ‘lgammal’ has not been declared in ‘::’
2152 | using ::lgammal;
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2155:11: error: ‘llrint’ has not been declared in ‘::’
2155 | using ::llrint;
| ^~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2156:11: error: ‘llrintf’ has not been declared in ‘::’
2156 | using ::llrintf;
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2157:11: error: ‘llrintl’ has not been declared in ‘::’
2157 | using ::llrintl;
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2159:11: error: ‘llround’ has not been declared in ‘::’
2159 | using ::llround;
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2160:11: error: ‘llroundf’ has not been declared in ‘::’
2160 | using ::llroundf;
| ^~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2161:11: error: ‘llroundl’ has not been declared in ‘::’
2161 | using ::llroundl;
| ^~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2164:11: error: ‘log1p’ has not been declared in ‘::’
2164 | using ::log1p;
| ^~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2165:11: error: ‘log1pf’ has not been declared in ‘::’
2165 | using ::log1pf;
| ^~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2166:11: error: ‘log1pl’ has not been declared in ‘::’
2166 | using ::log1pl;
| ^~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2168:11: error: ‘log2’ has not been declared in ‘::’
2168 | using ::log2;
| ^~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2169:11: error: ‘log2f’ has not been declared in ‘::’
2169 | using ::log2f;
| ^~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2170:11: error: ‘log2l’ has not been declared in ‘::’
2170 | using ::log2l;
| ^~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2172:11: error: ‘logb’ has not been declared in ‘::’
2172 | using ::logb;
| ^~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2173:11: error: ‘logbf’ has not been declared in ‘::’
2173 | using ::logbf;
| ^~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2174:11: error: ‘logbl’ has not been declared in ‘::’
2174 | using ::logbl;
| ^~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2176:11: error: ‘lrint’ has not been declared in ‘::’
2176 | using ::lrint;
| ^~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2177:11: error: ‘lrintf’ has not been declared in ‘::’
2177 | using ::lrintf;
| ^~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2178:11: error: ‘lrintl’ has not been declared in ‘::’
2178 | using ::lrintl;
| ^~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2180:11: error: ‘lround’ has not been declared in ‘::’
2180 | using ::lround;
| ^~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2181:11: error: ‘lroundf’ has not been declared in ‘::’
2181 | using ::lroundf;
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2182:11: error: ‘lroundl’ has not been declared in ‘::’
2182 | using ::lroundl;
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2184:11: error: ‘nan’ has not been declared in ‘::’
2184 | using ::nan;
| ^~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2185:11: error: ‘nanf’ has not been declared in ‘::’
2185 | using ::nanf;
| ^~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2186:11: error: ‘nanl’ has not been declared in ‘::’
2186 | using ::nanl;
| ^~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2188:11: error: ‘nearbyint’ has not been declared in ‘::’
2188 | using ::nearbyint;
| ^~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2189:11: error: ‘nearbyintf’ has not been declared in ‘::’
2189 | using ::nearbyintf;
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2190:11: error: ‘nearbyintl’ has not been declared in ‘::’
2190 | using ::nearbyintl;
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2192:11: error: ‘nextafter’ has not been declared in ‘::’
2192 | using ::nextafter;
| ^~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2193:11: error: ‘nextafterf’ has not been declared in ‘::’
2193 | using ::nextafterf;
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2194:11: error: ‘nextafterl’ has not been declared in ‘::’
2194 | using ::nextafterl;
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2196:11: error: ‘nexttoward’ has not been declared in ‘::’
2196 | using ::nexttoward;
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2197:11: error: ‘nexttowardf’ has not been declared in ‘::’
2197 | using ::nexttowardf;
| ^~~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2198:11: error: ‘nexttowardl’ has not been declared in ‘::’
2198 | using ::nexttowardl;
| ^~~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2200:11: error: ‘remainder’ has not been declared in ‘::’
2200 | using ::remainder;
| ^~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2201:11: error: ‘remainderf’ has not been declared in ‘::’
2201 | using ::remainderf;
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2202:11: error: ‘remainderl’ has not been declared in ‘::’
2202 | using ::remainderl;
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2204:11: error: ‘remquo’ has not been declared in ‘::’
2204 | using ::remquo;
| ^~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2205:11: error: ‘remquof’ has not been declared in ‘::’
2205 | using ::remquof;
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2206:11: error: ‘remquol’ has not been declared in ‘::’
2206 | using ::remquol;
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2208:11: error: ‘rint’ has not been declared in ‘::’
2208 | using ::rint;
| ^~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2209:11: error: ‘rintf’ has not been declared in ‘::’
2209 | using ::rintf;
| ^~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2210:11: error: ‘rintl’ has not been declared in ‘::’
2210 | using ::rintl;
| ^~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2212:11: error: ‘round’ has not been declared in ‘::’
2212 | using ::round;
| ^~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2213:11: error: ‘roundf’ has not been declared in ‘::’
2213 | using ::roundf;
| ^~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2214:11: error: ‘roundl’ has not been declared in ‘::’
2214 | using ::roundl;
| ^~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2216:11: error: ‘scalbln’ has not been declared in ‘::’
2216 | using ::scalbln;
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2217:11: error: ‘scalblnf’ has not been declared in ‘::’
2217 | using ::scalblnf;
| ^~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2218:11: error: ‘scalblnl’ has not been declared in ‘::’
2218 | using ::scalblnl;
| ^~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2220:11: error: ‘scalbn’ has not been declared in ‘::’
2220 | using ::scalbn;
| ^~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2221:11: error: ‘scalbnf’ has not been declared in ‘::’
2221 | using ::scalbnf;
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2222:11: error: ‘scalbnl’ has not been declared in ‘::’
2222 | using ::scalbnl;
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2224:11: error: ‘tgamma’ has not been declared in ‘::’
2224 | using ::tgamma;
| ^~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2225:11: error: ‘tgammaf’ has not been declared in ‘::’
2225 | using ::tgammaf;
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2226:11: error: ‘tgammal’ has not been declared in ‘::’
2226 | using ::tgammal;
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2228:11: error: ‘trunc’ has not been declared in ‘::’
2228 | using ::trunc;
| ^~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2229:11: error: ‘truncf’ has not been declared in ‘::’
2229 | using ::truncf;
| ^~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2230:11: error: ‘truncl’ has not been declared in ‘::’
2230 | using ::truncl;
| ^~~~~~
/usr/include/wchar.h:90:1: error: ‘__BEGIN_DECLS’ does not name a type
90 | __BEGIN_DECLS
| ^~~~~~~~~~~~~
/usr/include/wchar.h:100:6: error: expected initializer before ‘__THROW’
100 | __THROW __nonnull ((1, 2));
| ^~~~~~~
/usr/include/wchar.h:104:59: error: ‘size_t’ has not been declared
104 | const wchar_t *__restrict __src, size_t __n)
| ^~~~~~
/usr/include/wchar.h:105:6: error: expected initializer before ‘__THROW’
105 | __THROW __nonnull ((1, 2));
| ^~~~~~~
/usr/include/wchar.h:123:6: error: expected initializer before ‘__THROW’
123 | __THROW __nonnull ((1, 2));
| ^~~~~~~
/usr/include/wchar.h:126:59: error: ‘size_t’ has not been declared
126 | const wchar_t *__restrict __src, size_t __n)
| ^~~~~~
/usr/include/wchar.h:127:6: error: expected initializer before ‘__THROW’
127 | __THROW __nonnull ((1, 2));
| ^~~~~~~
/usr/include/wchar.h:131:6: error: expected initializer before ‘__THROW’
131 | __THROW __attribute_pure__ __nonnull ((1, 2));
| ^~~~~~~
/usr/include/wchar.h:133:63: error: ‘size_t’ has not been declared
133 | extern int wcsncmp (const wchar_t *__s1, const wchar_t *__s2, size_t __n)
| ^~~~~~
/usr/include/wchar.h:134:6: error: expected initializer before ‘__THROW’
134 | __THROW __attribute_pure__ __nonnull ((1, 2));
| ^~~~~~~
/usr/include/wchar.h:155:63: error: expected initializer before ‘__THROW’
155 | extern int wcscoll (const wchar_t *__s1, const wchar_t *__s2) __THROW;
| ^~~~~~~
/usr/include/wchar.h:159:8: error: ‘size_t’ does not name a type
159 | extern size_t wcsxfrm (wchar_t *__restrict __s1,
| ^~~~~~
/usr/include/wchar.h:55:1: note: ‘size_t’ is defined in header ‘<cstddef>’; this is probably fixable by adding ‘#include <cstddef>’
54 | #include <bits/types/__FILE.h>
+++ |+#include <cstddef>
55 |
/usr/include/wchar.h:190:6: error: expected initializer before ‘__THROW’
190 | __THROW __attribute_pure__;
| ^~~~~~~
/usr/include/wchar.h:200:6: error: expected initializer before ‘__THROW’
200 | __THROW __attribute_pure__;
| ^~~~~~~
/usr/include/wchar.h:212:8: error: ‘size_t’ does not name a type
212 | extern size_t wcscspn (const wchar_t *__wcs, const wchar_t *__reject)
| ^~~~~~
/usr/include/wchar.h:212:8: note: ‘size_t’ is defined in header ‘<cstddef>’; this is probably fixable by adding ‘#include <cstddef>’
/usr/include/wchar.h:216:8: error: ‘size_t’ does not name a type
216 | extern size_t wcsspn (const wchar_t *__wcs, const wchar_t *__accept)
| ^~~~~~
/usr/include/wchar.h:216:8: note: ‘size_t’ is defined in header ‘<cstddef>’; this is probably fixable by adding ‘#include <cstddef>’
/usr/include/wchar.h:227:6: error: expected initializer before ‘__THROW’
227 | __THROW __attribute_pure__;
| ^~~~~~~
/usr/include/wchar.h:238:6: error: expected initializer before ‘__THROW’
238 | __THROW __attribute_pure__;
| ^~~~~~~
/usr/include/wchar.h:244:53: error: expected initializer before ‘__THROW’
244 | wchar_t **__restrict __ptr) __THROW;
| ^~~~~~~
/usr/include/wchar.h:247:8: error: ‘size_t’ does not name a type
247 | extern size_t wcslen (const wchar_t *__s) __THROW __attribute_pure__;
| ^~~~~~
/usr/include/wchar.h:247:8: note: ‘size_t’ is defined in header ‘<cstddef>’; this is probably fixable by adding ‘#include <cstddef>’
/usr/include/wchar.h:278:59: error: ‘size_t’ has not been declared
278 | extern wchar_t *wmemchr (const wchar_t *__s, wchar_t __c, size_t __n)
| ^~~~~~
/usr/include/wchar.h:279:6: error: expected initializer before ‘__THROW’
279 | __THROW __attribute_pure__;
| ^~~~~~~
/usr/include/wchar.h:283:63: error: ‘size_t’ has not been declared
283 | extern int wmemcmp (const wchar_t *__s1, const wchar_t *__s2, size_t __n)
| ^~~~~~
/usr/include/wchar.h:284:6: error: expected initializer before ‘__THROW’
284 | __THROW __attribute_pure__;
| ^~~~~~~
/usr/include/wchar.h:288:58: error: ‘size_t’ has not been declared
288 | const wchar_t *__restrict __s2, size_t __n) __THROW;
| ^~~~~~
/usr/include/wchar.h:288:70: error: expected initializer before ‘__THROW’
288 | const wchar_t *__restrict __s2, size_t __n) __THROW;
| ^~~~~~~
/usr/include/wchar.h:292:63: error: ‘size_t’ has not been declared
292 | extern wchar_t *wmemmove (wchar_t *__s1, const wchar_t *__s2, size_t __n)
| ^~~~~~
/usr/include/wchar.h:293:6: error: expected initializer before ‘__THROW’
293 | __THROW;
| ^~~~~~~
/usr/include/wchar.h:296:53: error: ‘size_t’ has not been declared
296 | extern wchar_t *wmemset (wchar_t *__s, wchar_t __c, size_t __n) __THROW;
| ^~~~~~
/usr/include/wchar.h:296:65: error: expected initializer before ‘__THROW’
296 | extern wchar_t *wmemset (wchar_t *__s, wchar_t __c, size_t __n) __THROW;
| ^~~~~~~
/usr/include/wchar.h:309:31: error: expected initializer before ‘__THROW’
309 | extern wint_t btowc (int __c) __THROW;
| ^~~~~~~
/usr/include/wchar.h:313:31: error: expected initializer before ‘__THROW’
313 | extern int wctob (wint_t __c) __THROW;
| ^~~~~~~
/usr/include/wchar.h:317:44: error: expected initializer before ‘__THROW’
317 | extern int mbsinit (const mbstate_t *__ps) __THROW __attribute_pure__;
| ^~~~~~~
/usr/include/wchar.h:321:8: error: ‘size_t’ does not name a type
321 | extern size_t mbrtowc (wchar_t *__restrict __pwc,
| ^~~~~~
/usr/include/wchar.h:321:8: note: ‘size_t’ is defined in header ‘<cstddef>’; this is probably fixable by adding ‘#include <cstddef>’
/usr/include/wchar.h:326:8: error: ‘size_t’ does not name a type
326 | extern size_t wcrtomb (char *__restrict __s, wchar_t __wc,
| ^~~~~~
/usr/include/wchar.h:326:8: note: ‘size_t’ is defined in header ‘<cstddef>’; this is probably fixable by adding ‘#include <cstddef>’
/usr/include/wchar.h:330:8: error: ‘size_t’ does not name a type
330 | extern size_t __mbrlen (const char *__restrict __s, size_t __n,
| ^~~~~~
/usr/include/wchar.h:330:8: note: ‘size_t’ is defined in header ‘<cstddef>’; this is probably fixable by adding ‘#include <cstddef>’
/usr/include/wchar.h:332:8: error: ‘size_t’ does not name a type
332 | extern size_t mbrlen (const char *__restrict __s, size_t __n,
| ^~~~~~
/usr/include/wchar.h:332:8: note: ‘size_t’ is defined in header ‘<cstddef>’; this is probably fixable by adding ‘#include <cstddef>’
/usr/include/wchar.h:362:8: error: ‘size_t’ does not name a type
362 | extern size_t mbsrtowcs (wchar_t *__restrict __dst,
| ^~~~~~
/usr/include/wchar.h:362:8: note: ‘size_t’ is defined in header ‘<cstddef>’; this is probably fixable by adding ‘#include <cstddef>’
/usr/include/wchar.h:368:8: error: ‘size_t’ does not name a type
368 | extern size_t wcsrtombs (char *__restrict __dst,
| ^~~~~~
/usr/include/wchar.h:368:8: note: ‘size_t’ is defined in header ‘<cstddef>’; this is probably fixable by adding ‘#include <cstddef>’
/usr/include/wchar.h:403:54: error: expected initializer before ‘__THROW’
403 | wchar_t **__restrict __endptr) __THROW;
| ^~~~~~~
/usr/include/wchar.h:456:68: error: expected initializer before ‘__THROW’
456 | wchar_t **__restrict __endptr, int __base) __THROW;
| ^~~~~~~
/usr/include/wchar.h:462:6: error: expected initializer before ‘__THROW’
462 | __THROW;
| ^~~~~~~
/usr/include/wchar.h:1043:8: error: ‘size_t’ does not name a type
1043 | extern size_t wcsftime (wchar_t *__restrict __s, size_t __maxsize,
| ^~~~~~
/usr/include/wchar.h:1043:8: note: ‘size_t’ is defined in header ‘<cstddef>’; this is probably fixable by adding ‘#include <cstddef>’
/usr/include/wchar.h:1073:1: error: ‘__END_DECLS’ does not name a type
1073 | __END_DECLS
| ^~~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cwchar:143:11: error: ‘btowc’ has not been declared in ‘::’
143 | using ::btowc;
| ^~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cwchar:148:11: error: ‘fwide’ has not been declared in ‘::’
148 | using ::fwide;
| ^~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cwchar:149:11: error: ‘fwprintf’ has not been declared in ‘::’
149 | using ::fwprintf;
| ^~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cwchar:150:11: error: ‘fwscanf’ has not been declared in ‘::’
150 | using ::fwscanf;
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cwchar:153:11: error: ‘mbrlen’ has not been declared in ‘::’
153 | using ::mbrlen;
| ^~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cwchar:154:11: error: ‘mbrtowc’ has not been declared in ‘::’
154 | using ::mbrtowc;
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cwchar:155:11: error: ‘mbsinit’ has not been declared in ‘::’
155 | using ::mbsinit;
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cwchar:156:11: error: ‘mbsrtowcs’ has not been declared in ‘::’
156 | using ::mbsrtowcs;
| ^~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cwchar:160:11: error: ‘swprintf’ has not been declared in ‘::’
160 | using ::swprintf;
| ^~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cwchar:162:11: error: ‘swscanf’ has not been declared in ‘::’
162 | using ::swscanf;
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cwchar:164:11: error: ‘vfwprintf’ has not been declared in ‘::’
164 | using ::vfwprintf;
| ^~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cwchar:166:11: error: ‘vfwscanf’ has not been declared in ‘::’
166 | using ::vfwscanf;
| ^~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cwchar:169:11: error: ‘vswprintf’ has not been declared in ‘::’
169 | using ::vswprintf;
| ^~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cwchar:172:11: error: ‘vswscanf’ has not been declared in ‘::’
172 | using ::vswscanf;
| ^~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cwchar:174:11: error: ‘vwprintf’ has not been declared in ‘::’
174 | using ::vwprintf;
| ^~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cwchar:176:11: error: ‘vwscanf’ has not been declared in ‘::’
176 | using ::vwscanf;
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cwchar:178:11: error: ‘wcrtomb’ has not been declared in ‘::’
178 | using ::wcrtomb;
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cwchar:179:11: error: ‘wcscat’ has not been declared in ‘::’
179 | using ::wcscat;
| ^~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cwchar:180:11: error: ‘wcscmp’ has not been declared in ‘::’
180 | using ::wcscmp;
| ^~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cwchar:181:11: error: ‘wcscoll’ has not been declared in ‘::’
181 | using ::wcscoll;
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cwchar:182:11: error: ‘wcscpy’ has not been declared in ‘::’
182 | using ::wcscpy;
| ^~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cwchar:183:11: error: ‘wcscspn’ has not been declared in ‘::’
183 | using ::wcscspn;
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cwchar:184:11: error: ‘wcsftime’ has not been declared in ‘::’
184 | using ::wcsftime;
| ^~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cwchar:185:11: error: ‘wcslen’ has not been declared in ‘::’
185 | using ::wcslen;
| ^~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cwchar:186:11: error: ‘wcsncat’ has not been declared in ‘::’
186 | using ::wcsncat;
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cwchar:187:11: error: ‘wcsncmp’ has not been declared in ‘::’
187 | using ::wcsncmp;
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cwchar:188:11: error: ‘wcsncpy’ has not been declared in ‘::’
188 | using ::wcsncpy;
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cwchar:189:11: error: ‘wcsrtombs’ has not been declared in ‘::’
189 | using ::wcsrtombs;
| ^~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cwchar:190:11: error: ‘wcsspn’ has not been declared in ‘::’
190 | using ::wcsspn;
| ^~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cwchar:191:11: error: ‘wcstod’ has not been declared in ‘::’
191 | using ::wcstod;
| ^~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cwchar:193:11: error: ‘wcstof’ has not been declared in ‘::’
193 | using ::wcstof;
| ^~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cwchar:195:11: error: ‘wcstok’ has not been declared in ‘::’
195 | using ::wcstok;
| ^~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cwchar:196:11: error: ‘wcstol’ has not been declared in ‘::’
196 | using ::wcstol;
| ^~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cwchar:197:11: error: ‘wcstoul’ has not been declared in ‘::’
197 | using ::wcstoul;
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cwchar:198:11: error: ‘wcsxfrm’ has not been declared in ‘::’
198 | using ::wcsxfrm;
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cwchar:199:11: error: ‘wctob’ has not been declared in ‘::’
199 | using ::wctob;
| ^~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cwchar:200:11: error: ‘wmemcmp’ has not been declared in ‘::’
200 | using ::wmemcmp;
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cwchar:201:11: error: ‘wmemcpy’ has not been declared in ‘::’
201 | using ::wmemcpy;
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cwchar:202:11: error: ‘wmemmove’ has not been declared in ‘::’
202 | using ::wmemmove;
| ^~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cwchar:203:11: error: ‘wmemset’ has not been declared in ‘::’
203 | using ::wmemset;
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cwchar:204:11: error: ‘wprintf’ has not been declared in ‘::’
204 | using ::wprintf;
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cwchar:205:11: error: ‘wscanf’ has not been declared in ‘::’
205 | using ::wscanf;
| ^~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cwchar:206:11: error: ‘wcschr’ has not been declared in ‘::’
206 | using ::wcschr;
| ^~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cwchar:207:11: error: ‘wcspbrk’ has not been declared in ‘::’
207 | using ::wcspbrk;
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cwchar:208:11: error: ‘wcsrchr’ has not been declared in ‘::’
208 | using ::wcsrchr;
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cwchar:209:11: error: ‘wcsstr’ has not been declared in ‘::’
209 | using ::wcsstr;
| ^~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cwchar:210:11: error: ‘wmemchr’ has not been declared in ‘::’
210 | using ::wmemchr;
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cwchar: In function ‘wchar_t* std::wcschr(wchar_t*, wchar_t)’:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cwchar:215:19: error: invalid conversion from ‘const wchar_t*’ to ‘wchar_t*’ [-fpermissive]
215 | { return wcschr(const_cast<const wchar_t*>(__p), __c); }
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
| |
| const wchar_t*
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cwchar:214:19: note: initializing argument 1 of ‘wchar_t* std::wcschr(wchar_t*, wchar_t)’
214 | wcschr(wchar_t* __p, wchar_t __c)
| ~~~~~~~~~^~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cwchar: In function ‘wchar_t* std::wcspbrk(wchar_t*, const wchar_t*)’:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cwchar:219:20: error: invalid conversion from ‘const wchar_t*’ to ‘wchar_t*’ [-fpermissive]
219 | { return wcspbrk(const_cast<const wchar_t*>(__s1), __s2); }
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
| |
| const wchar_t*
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cwchar:218:20: note: initializing argument 1 of ‘wchar_t* std::wcspbrk(wchar_t*, const wchar_t*)’
218 | wcspbrk(wchar_t* __s1, const wchar_t* __s2)
| ~~~~~~~~~^~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cwchar: In function ‘wchar_t* std::wcsrchr(wchar_t*, wchar_t)’:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cwchar:223:20: error: invalid conversion from ‘const wchar_t*’ to ‘wchar_t*’ [-fpermissive]
223 | { return wcsrchr(const_cast<const wchar_t*>(__p), __c); }
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
| |
| const wchar_t*
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cwchar:222:20: note: initializing argument 1 of ‘wchar_t* std::wcsrchr(wchar_t*, wchar_t)’
222 | wcsrchr(wchar_t* __p, wchar_t __c)
| ~~~~~~~~~^~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cwchar: In function ‘wchar_t* std::wcsstr(wchar_t*, const wchar_t*)’:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cwchar:227:19: error: invalid conversion from ‘const wchar_t*’ to ‘wchar_t*’ [-fpermissive]
227 | { return wcsstr(const_cast<const wchar_t*>(__s1), __s2); }
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
| |
| const wchar_t*
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cwchar:226:19: note: initializing argument 1 of ‘wchar_t* std::wcsstr(wchar_t*, const wchar_t*)’
226 | wcsstr(wchar_t* __s1, const wchar_t* __s2)
| ~~~~~~~~~^~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cwchar: In function ‘wchar_t* std::wmemchr(wchar_t*, wchar_t, size_t)’:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cwchar:231:20: error: invalid conversion from ‘const wchar_t*’ to ‘wchar_t*’ [-fpermissive]
231 | { return wmemchr(const_cast<const wchar_t*>(__p), __c, __n); }
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
| |
| const wchar_t*
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cwchar:230:20: note: initializing argument 1 of ‘wchar_t* std::wmemchr(wchar_t*, wchar_t, size_t)’
230 | wmemchr(wchar_t* __p, wchar_t __c, size_t __n)
| ~~~~~~~~~^~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cwchar: At global scope:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cwchar:251:11: error: ‘wcstold’ has not been declared in ‘::’
251 | using ::wcstold;
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cwchar:260:11: error: ‘wcstoll’ has not been declared in ‘::’
260 | using ::wcstoll;
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cwchar:261:11: error: ‘wcstoull’ has not been declared in ‘::’
261 | using ::wcstoull;
| ^~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cwchar:267:22: error: ‘wcstold’ has not been declared in ‘__gnu_cxx’
267 | using ::__gnu_cxx::wcstold;
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cwchar:268:22: error: ‘wcstoll’ has not been declared in ‘__gnu_cxx’
268 | using ::__gnu_cxx::wcstoll;
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cwchar:269:22: error: ‘wcstoull’ has not been declared in ‘__gnu_cxx’
269 | using ::__gnu_cxx::wcstoull;
| ^~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cwchar:283:14: error: ‘wcstof’ has not been declared in ‘std’
283 | using std::wcstof;
| ^~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cwchar:286:14: error: ‘vfwscanf’ has not been declared in ‘std’
286 | using std::vfwscanf;
| ^~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cwchar:289:14: error: ‘vswscanf’ has not been declared in ‘std’
289 | using std::vswscanf;
| ^~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cwchar:292:14: error: ‘vwscanf’ has not been declared in ‘std’
292 | using std::vwscanf;
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cwchar:296:14: error: ‘wcstold’ has not been declared in ‘std’
296 | using std::wcstold;
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cwchar:297:14: error: ‘wcstoll’ has not been declared in ‘std’
297 | using std::wcstoll;
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cwchar:298:14: error: ‘wcstoull’ has not been declared in ‘std’
298 | using std::wcstoull;
| ^~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/char_traits.h:90:20: error: ‘mbstate_t’ in namespace ‘std’ does not name a type
90 | typedef std::mbstate_t state_type;
| ^~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/char_traits.h: In static member function ‘static int std::char_traits<wchar_t>::compare(const char_type*, const char_type*, std::size_t)’:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/char_traits.h:512:16: error: ‘wmemcmp’ was not declared in this scope; did you mean ‘wmemchr’?
512 | return wmemcmp(__s1, __s2, __n);
| ^~~~~~~
| wmemchr
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/char_traits.h: In static member function ‘static std::size_t std::char_traits<wchar_t>::length(const char_type*)’:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/char_traits.h:522:16: error: ‘wcslen’ was not declared in this scope
522 | return wcslen(__s);
| ^~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/char_traits.h: In static member function ‘static const std::char_traits<wchar_t>::char_type* std::char_traits<wchar_t>::find(const char_type*, std::size_t, const char_type&)’:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/char_traits.h:534:24: error: invalid conversion from ‘const std::char_traits<wchar_t>::char_type*’ {aka ‘const wchar_t*’} to ‘wchar_t*’ [-fpermissive]
534 | return wmemchr(__s, __a, __n);
| ^~~
| |
| const std::char_traits<wchar_t>::char_type* {aka const wchar_t*}
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cwchar:230:20: note: initializing argument 1 of ‘wchar_t* std::wmemchr(wchar_t*, wchar_t, size_t)’
230 | wmemchr(wchar_t* __p, wchar_t __c, size_t __n)
| ~~~~~~~~~^~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/char_traits.h: In static member function ‘static std::char_traits<wchar_t>::char_type* std::char_traits<wchar_t>::move(char_type*, const char_type*, std::size_t)’:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/char_traits.h:546:16: error: ‘wmemmove’ was not declared in this scope
546 | return wmemmove(__s1, __s2, __n);
| ^~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/char_traits.h: In static member function ‘static std::char_traits<wchar_t>::char_type* std::char_traits<wchar_t>::copy(char_type*, const char_type*, std::size_t)’:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/char_traits.h:558:16: error: ‘wmemcpy’ was not declared in this scope; did you mean ‘Memcpy’?
558 | return wmemcpy(__s1, __s2, __n);
| ^~~~~~~
| Memcpy
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/char_traits.h: In static member function ‘static std::char_traits<wchar_t>::char_type* std::char_traits<wchar_t>::assign(char_type*, std::size_t, char_type)’:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/char_traits.h:570:16: error: ‘wmemset’ was not declared in this scope
570 | return wmemset(__s, __a, __n);
| ^~~~~~~
In file included from /opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/clocale:42,
from /opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/c++locale.h:41,
from /opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/localefwd.h:40,
from /opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/string:45:
/usr/include/locale.h: At global scope:
/usr/include/locale.h:31:1: error: ‘__BEGIN_DECLS’ does not name a type
31 | __BEGIN_DECLS
| ^~~~~~~~~~~~~
/usr/include/locale.h:122:63: error: expected initializer before ‘__THROW’
122 | extern char *setlocale (int __category, const char *__locale) __THROW;
| ^~~~~~~
/usr/include/locale.h:125:40: error: expected initializer before ‘__THROW’
125 | extern struct lconv *localeconv (void) __THROW;
| ^~~~~~~
/usr/include/locale.h:195:1: error: ‘__END_DECLS’ does not name a type
195 | __END_DECLS
| ^~~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/c++locale.h:62:11: error: ‘__locale_t’ does not name a type; did you mean ‘__socklen_t’?
62 | typedef __locale_t __c_locale;
| ^~~~~~~~~~
| __socklen_t
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/c++locale.h:74:26: error: ‘__c_locale’ does not name a type
74 | __convert_from_v(const __c_locale& __cloc __attribute__ ((__unused__)),
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/c++locale.h: In function ‘int std::__convert_from_v(const int&, char*, int, const char*, ...)’:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/c++locale.h:82:24: error: ‘setlocale’ is not a member of ‘std’
82 | char* __old = std::setlocale(LC_NUMERIC, 0);
| ^~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/c++locale.h:89:14: error: ‘setlocale’ is not a member of ‘std’
89 | std::setlocale(LC_NUMERIC, "C");
| ^~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/c++locale.h:109:14: error: ‘setlocale’ is not a member of ‘std’
109 | std::setlocale(LC_NUMERIC, __sav);
| ^~~~~~~~~
In file included from /opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cctype:42,
from /opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/localefwd.h:42:
/usr/include/ctype.h: At global scope:
/usr/include/ctype.h:28:1: error: ‘__BEGIN_DECLS’ does not name a type
28 | __BEGIN_DECLS
| ^~~~~~~~~~~~~
/usr/include/ctype.h:80:6: error: expected initializer before ‘__THROW’
80 | __THROW __attribute__ ((__const__));
| ^~~~~~~
/usr/include/ctype.h:82:6: error: expected initializer before ‘__THROW’
82 | __THROW __attribute__ ((__const__));
| ^~~~~~~
/usr/include/ctype.h:84:6: error: expected initializer before ‘__THROW’
84 | __THROW __attribute__ ((__const__));
| ^~~~~~~
/usr/include/ctype.h:108:1: error: expected initializer before ‘__THROW’
108 | __exctype (isalnum);
| ^~~~~~~~~
/usr/include/ctype.h:109:1: error: expected initializer before ‘__THROW’
109 | __exctype (isalpha);
| ^~~~~~~~~
/usr/include/ctype.h:110:1: error: expected initializer before ‘__THROW’
110 | __exctype (iscntrl);
| ^~~~~~~~~
/usr/include/ctype.h:111:1: error: expected initializer before ‘__THROW’
111 | __exctype (isdigit);
| ^~~~~~~~~
/usr/include/ctype.h:112:1: error: expected initializer before ‘__THROW’
112 | __exctype (islower);
| ^~~~~~~~~
/usr/include/ctype.h:113:1: error: expected initializer before ‘__THROW’
113 | __exctype (isgraph);
| ^~~~~~~~~
/usr/include/ctype.h:114:1: error: expected initializer before ‘__THROW’
114 | __exctype (isprint);
| ^~~~~~~~~
/usr/include/ctype.h:115:1: error: expected initializer before ‘__THROW’
115 | __exctype (ispunct);
| ^~~~~~~~~
/usr/include/ctype.h:116:1: error: expected initializer before ‘__THROW’
116 | __exctype (isspace);
| ^~~~~~~~~
/usr/include/ctype.h:117:1: error: expected initializer before ‘__THROW’
117 | __exctype (isupper);
| ^~~~~~~~~
/usr/include/ctype.h:118:1: error: expected initializer before ‘__THROW’
118 | __exctype (isxdigit);
| ^~~~~~~~~
/usr/include/ctype.h:122:30: error: expected initializer before ‘__THROW’
122 | extern int tolower (int __c) __THROW;
| ^~~~~~~
/usr/include/ctype.h:125:30: error: expected initializer before ‘__THROW’
125 | extern int toupper (int __c) __THROW;
| ^~~~~~~
/usr/include/ctype.h:327:1: error: ‘__END_DECLS’ does not name a type
327 | __END_DECLS
| ^~~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cctype:87:11: error: ‘isblank’ has not been declared in ‘::’
87 | using ::isblank;
| ^~~~~~~
In file included from /opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/ext/string_conversions.h:43:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cstdlib:131:11: error: ‘div_t’ has not been declared in ‘::’
131 | using ::div_t;
| ^~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cstdlib:134:11: error: ‘abort’ has not been declared in ‘::’
134 | using ::abort;
| ^~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cstdlib:138:11: error: ‘atexit’ has not been declared in ‘::’
138 | using ::atexit;
| ^~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cstdlib:141:11: error: ‘at_quick_exit’ has not been declared in ‘::’
141 | using ::at_quick_exit;
| ^~~~~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cstdlib:144:11: error: ‘atof’ has not been declared in ‘::’
144 | using ::atof;
| ^~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cstdlib:145:11: error: ‘atoi’ has not been declared in ‘::’
145 | using ::atoi;
| ^~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cstdlib:146:11: error: ‘atol’ has not been declared in ‘::’
146 | using ::atol;
| ^~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cstdlib:147:11: error: ‘bsearch’ has not been declared in ‘::’
147 | using ::bsearch;
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cstdlib:149:11: error: ‘div’ has not been declared in ‘::’
149 | using ::div;
| ^~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cstdlib:150:11: error: ‘exit’ has not been declared in ‘::’
150 | using ::exit;
| ^~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cstdlib:151:11: error: ‘free’ has not been declared in ‘::’
151 | using ::free;
| ^~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cstdlib:152:11: error: ‘getenv’ has not been declared in ‘::’
152 | using ::getenv;
| ^~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cstdlib:153:11: error: ‘labs’ has not been declared in ‘::’
153 | using ::labs;
| ^~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cstdlib:154:11: error: ‘ldiv’ has not been declared in ‘::’
154 | using ::ldiv;
| ^~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cstdlib:157:11: error: ‘mblen’ has not been declared in ‘::’
157 | using ::mblen;
| ^~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cstdlib:158:11: error: ‘mbstowcs’ has not been declared in ‘::’
158 | using ::mbstowcs;
| ^~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cstdlib:159:11: error: ‘mbtowc’ has not been declared in ‘::’
159 | using ::mbtowc;
| ^~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cstdlib:161:11: error: ‘qsort’ has not been declared in ‘::’
161 | using ::qsort;
| ^~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cstdlib:164:11: error: ‘quick_exit’ has not been declared in ‘::’
164 | using ::quick_exit;
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cstdlib:167:11: error: ‘rand’ has not been declared in ‘::’
167 | using ::rand;
| ^~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cstdlib:168:11: error: ‘realloc’ has not been declared in ‘::’
168 | using ::realloc;
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cstdlib:169:11: error: ‘srand’ has not been declared in ‘::’
169 | using ::srand;
| ^~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cstdlib:170:11: error: ‘strtod’ has not been declared in ‘::’
170 | using ::strtod;
| ^~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cstdlib:171:11: error: ‘strtol’ has not been declared in ‘::’
171 | using ::strtol;
| ^~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cstdlib:172:11: error: ‘strtoul’ has not been declared in ‘::’
172 | using ::strtoul;
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cstdlib:173:11: error: ‘system’ has not been declared in ‘::’
173 | using ::system;
| ^~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cstdlib:175:11: error: ‘wcstombs’ has not been declared in ‘::’
175 | using ::wcstombs;
| ^~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cstdlib:176:11: error: ‘wctomb’ has not been declared in ‘::’
176 | using ::wctomb;
| ^~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cstdlib: In function ‘ldiv_t std::div(long int, long int)’:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cstdlib:181:53: error: ‘ldiv’ was not declared in this scope; did you mean ‘div’?
181 | div(long __i, long __j) _GLIBCXX_NOTHROW { return ldiv(__i, __j); }
| ^~~~
| div
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cstdlib: At global scope:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cstdlib:204:11: error: ‘lldiv_t’ has not been declared in ‘::’
204 | using ::lldiv_t;
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cstdlib:210:11: error: ‘_Exit’ has not been declared in ‘::’
210 | using ::_Exit;
| ^~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cstdlib:214:11: error: ‘llabs’ has not been declared in ‘::’
214 | using ::llabs;
| ^~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cstdlib:216:10: error: ‘lldiv_t’ does not name a type; did you mean ‘ldiv_t’?
216 | inline lldiv_t
| ^~~~~~~
| ldiv_t
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cstdlib:220:11: error: ‘lldiv’ has not been declared in ‘::’
220 | using ::lldiv;
| ^~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cstdlib:231:11: error: ‘atoll’ has not been declared in ‘::’
231 | using ::atoll;
| ^~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cstdlib:232:11: error: ‘strtoll’ has not been declared in ‘::’
232 | using ::strtoll;
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cstdlib:233:11: error: ‘strtoull’ has not been declared in ‘::’
233 | using ::strtoull;
| ^~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cstdlib:235:11: error: ‘strtof’ has not been declared in ‘::’
235 | using ::strtof;
| ^~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cstdlib:236:11: error: ‘strtold’ has not been declared in ‘::’
236 | using ::strtold;
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cstdlib:244:22: error: ‘lldiv_t’ has not been declared in ‘__gnu_cxx’
244 | using ::__gnu_cxx::lldiv_t;
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cstdlib:246:22: error: ‘_Exit’ has not been declared in ‘__gnu_cxx’
246 | using ::__gnu_cxx::_Exit;
| ^~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cstdlib:248:22: error: ‘llabs’ has not been declared in ‘__gnu_cxx’
248 | using ::__gnu_cxx::llabs;
| ^~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cstdlib:249:22: error: ‘div’ has not been declared in ‘__gnu_cxx’
249 | using ::__gnu_cxx::div;
| ^~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cstdlib:250:22: error: ‘lldiv’ has not been declared in ‘__gnu_cxx’
250 | using ::__gnu_cxx::lldiv;
| ^~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cstdlib:252:22: error: ‘atoll’ has not been declared in ‘__gnu_cxx’
252 | using ::__gnu_cxx::atoll;
| ^~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cstdlib:253:22: error: ‘strtof’ has not been declared in ‘__gnu_cxx’
253 | using ::__gnu_cxx::strtof;
| ^~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cstdlib:254:22: error: ‘strtoll’ has not been declared in ‘__gnu_cxx’
254 | using ::__gnu_cxx::strtoll;
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cstdlib:255:22: error: ‘strtoull’ has not been declared in ‘__gnu_cxx’
255 | using ::__gnu_cxx::strtoull;
| ^~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cstdlib:256:22: error: ‘strtold’ has not been declared in ‘__gnu_cxx’
256 | using ::__gnu_cxx::strtold;
| ^~~~~~~
/usr/include/stdio.h:29:1: error: ‘__BEGIN_DECLS’ does not name a type
29 | __BEGIN_DECLS
| ^~~~~~~~~~~~~
In file included from /usr/include/stdio.h:39:
/usr/include/bits/types/__fpos_t.h:14:3: error: ‘__fpos_t’ does not name a type
14 | } __fpos_t;
| ^~~~~~~~
In file included from /usr/include/stdio.h:43:
/usr/include/bits/types/struct_FILE.h:95:3: error: ‘size_t’ does not name a type
95 | size_t __pad5;
| ^~~~~~
/usr/include/bits/types/struct_FILE.h:1:1: note: ‘size_t’ is defined in header ‘<cstddef>’; this is probably fixable by adding ‘#include <cstddef>’
+++ |+#include <cstddef>
1 | /* Copyright (C) 1991-2023 Free Software Foundation, Inc.
/usr/include/bits/types/struct_FILE.h:98:67: error: ‘size_t’ was not declared in this scope; did you mean ‘std::size_t’?
98 | char _unused2[15 * sizeof (int) - 4 * sizeof (void *) - sizeof (size_t)];
| ^~~~~~
| std::size_t
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/c++config.h:310:33: note: ‘std::size_t’ declared here
310 | typedef __SIZE_TYPE__ size_t;
| ^~~~~~
/usr/include/stdio.h:84:9: error: ‘__fpos_t’ does not name a type; did you mean ‘__fpos64_t’?
84 | typedef __fpos_t fpos_t;
| ^~~~~~~~
| __fpos64_t
/usr/include/stdio.h:157:44: error: expected initializer before ‘__THROW’
157 | extern int remove (const char *__filename) __THROW;
| ^~~~~~~
/usr/include/stdio.h:159:58: error: expected initializer before ‘__THROW’
159 | extern int rename (const char *__old, const char *__new) __THROW;
| ^~~~~~~
/usr/include/stdio.h:183:36: error: expected initializer before ‘__nonnull’
183 | extern int fclose (FILE *__stream) __nonnull ((1));
| ^~~~~~~~~
/usr/include/stdio.h:194:3: error: expected initializer before ‘__attribute_malloc__’
194 | __attribute_malloc__ __attr_dealloc_fclose __wur;
| ^~~~~~~~~~~~~~~~~~~~
/usr/include/stdio.h:210:38: error: expected initializer before ‘__THROW’
210 | extern char *tmpnam (char[L_tmpnam]) __THROW __wur;
| ^~~~~~~
/usr/include/stdio.h:265:3: error: expected initializer before ‘__attribute_malloc__’
265 | __attribute_malloc__ __attr_dealloc_fclose __wur;
| ^~~~~~~~~~~~~~~~~~~~
/usr/include/stdio.h:272:50: error: expected initializer before ‘__wur’
272 | FILE *__restrict __stream) __wur __nonnull ((3));
| ^~~~~
/usr/include/stdio.h:333:72: error: expected initializer before ‘__THROW’
333 | extern void setbuf (FILE *__restrict __stream, char *__restrict __buf) __THROW;
| ^~~~~~~
/usr/include/stdio.h:338:34: error: ‘size_t’ has not been declared
338 | int __modes, size_t __n) __THROW;
| ^~~~~~
/usr/include/stdio.h:338:46: error: expected initializer before ‘__THROW’
338 | int __modes, size_t __n) __THROW;
| ^~~~~~~
/usr/include/stdio.h:364:59: error: expected initializer before ‘__THROWNL’
364 | const char *__restrict __format, ...) __THROWNL;
| ^~~~~~~~~
/usr/include/stdio.h:379:44: error: expected initializer before ‘__THROWNL’
379 | __gnuc_va_list __arg) __THROWNL;
| ^~~~~~~~~
/usr/include/stdio.h:421:58: error: expected initializer before ‘__wur’
421 | const char *__restrict __format, ...) __wur;
| ^~~~~
/usr/include/stdio.h:426:57: error: expected initializer before ‘__wur’
426 | extern int scanf (const char *__restrict __format, ...) __wur;
| ^~~~~
/usr/include/stdio.h:429:58: error: expected initializer before ‘__THROW’
429 | const char *__restrict __format, ...) __THROW;
| ^~~~~~~
/usr/include/stdio.h:651:6: error: expected initializer before ‘__wur’
651 | __wur __fortified_attr_access (__write_only__, 1, 2);
| ^~~~~
/usr/include/stdio.h:733:8: error: ‘size_t’ does not name a type
733 | extern size_t fread (void *__restrict __ptr, size_t __size,
| ^~~~~~
/usr/include/stdio.h:129:1: note: ‘size_t’ is defined in header ‘<cstddef>’; this is probably fixable by adding ‘#include <cstddef>’
128 | #include <bits/stdio_lim.h>
+++ |+#include <cstddef>
129 |
/usr/include/stdio.h:739:8: error: ‘size_t’ does not name a type
739 | extern size_t fwrite (const void *__restrict __ptr, size_t __size,
| ^~~~~~
/usr/include/stdio.h:739:8: note: ‘size_t’ is defined in header ‘<cstddef>’; this is probably fixable by adding ‘#include <cstddef>’
/usr/include/stdio.h:776:40: error: expected initializer before ‘__wur’
776 | extern long int ftell (FILE *__stream) __wur;
| ^~~~~
/usr/include/stdio.h:818:48: error: ‘fpos_t’ has not been declared
818 | extern int fgetpos (FILE *__restrict __stream, fpos_t *__restrict __pos);
| ^~~~~~
/usr/include/stdio.h:823:43: error: ‘fpos_t’ does not name a type
823 | extern int fsetpos (FILE *__stream, const fpos_t *__pos);
| ^~~~~~
/usr/include/stdio.h:129:1: note: ‘fpos_t’ is defined in header ‘<cstdio>’; this is probably fixable by adding ‘#include <cstdio>’
128 | #include <bits/stdio_lim.h>
+++ |+#include <cstdio>
129 |
/usr/include/stdio.h:844:39: error: expected initializer before ‘__THROW’
844 | extern void clearerr (FILE *__stream) __THROW;
| ^~~~~~~
/usr/include/stdio.h:846:34: error: expected initializer before ‘__THROW’
846 | extern int feof (FILE *__stream) __THROW __wur;
| ^~~~~~~
/usr/include/stdio.h:848:36: error: expected initializer before ‘__THROW’
848 | extern int ferror (FILE *__stream) __THROW __wur;
| ^~~~~~~
/usr/include/stdio.h:862:38: error: expected initializer before ‘__COLD’
862 | extern void perror (const char *__s) __COLD;
| ^~~~~~
/usr/include/stdio.h:967:1: error: ‘__END_DECLS’ does not name a type
967 | __END_DECLS
| ^~~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cstdio:175:11: error: ‘snprintf’ has not been declared in ‘::’
175 | using ::snprintf;
| ^~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cstdio:176:11: error: ‘vfscanf’ has not been declared in ‘::’
176 | using ::vfscanf;
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cstdio:177:11: error: ‘vscanf’ has not been declared in ‘::’
177 | using ::vscanf;
| ^~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cstdio:178:11: error: ‘vsnprintf’ has not been declared in ‘::’
178 | using ::vsnprintf;
| ^~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cstdio:179:11: error: ‘vsscanf’ has not been declared in ‘::’
179 | using ::vsscanf;
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cstdio:185:22: error: ‘snprintf’ has not been declared in ‘__gnu_cxx’
185 | using ::__gnu_cxx::snprintf;
| ^~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cstdio:186:22: error: ‘vfscanf’ has not been declared in ‘__gnu_cxx’
186 | using ::__gnu_cxx::vfscanf;
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cstdio:187:22: error: ‘vscanf’ has not been declared in ‘__gnu_cxx’
187 | using ::__gnu_cxx::vscanf;
| ^~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cstdio:188:22: error: ‘vsnprintf’ has not been declared in ‘__gnu_cxx’
188 | using ::__gnu_cxx::vsnprintf;
| ^~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cstdio:189:22: error: ‘vsscanf’ has not been declared in ‘__gnu_cxx’
189 | using ::__gnu_cxx::vsscanf;
| ^~~~~~~
In file included from /opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cerrno:42,
from /opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/ext/string_conversions.h:46:
/usr/include/errno.h:34:1: error: ‘__BEGIN_DECLS’ does not name a type
34 | __BEGIN_DECLS
| ^~~~~~~~~~~~~
/usr/include/errno.h:52:1: error: ‘__END_DECLS’ does not name a type
52 | __END_DECLS
| ^~~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/basic_string.h: In function ‘int std::__cxx11::stoi(const std::string&, std::size_t*, int)’:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/basic_string.h:4165:23: error: ‘__stoa’ is not a member of ‘__gnu_cxx’
4165 | { return __gnu_cxx::__stoa<long, int>(&std::strtol, "stoi", __str.c_str(),
| ^~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/basic_string.h:4165:30: error: expected primary-expression before ‘long’
4165 | { return __gnu_cxx::__stoa<long, int>(&std::strtol, "stoi", __str.c_str(),
| ^~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/basic_string.h:4165:30: error: expected ‘;’ before ‘long’
4165 | { return __gnu_cxx::__stoa<long, int>(&std::strtol, "stoi", __str.c_str(),
| ^~~~
| ;
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/basic_string.h:4165:34: error: expected unqualified-id before ‘,’ token
4165 | { return __gnu_cxx::__stoa<long, int>(&std::strtol, "stoi", __str.c_str(),
| ^
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/basic_string.h:4165:36: error: expected unqualified-id before ‘int’
4165 | { return __gnu_cxx::__stoa<long, int>(&std::strtol, "stoi", __str.c_str(),
| ^~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/basic_string.h: In function ‘long int std::__cxx11::stol(const std::string&, std::size_t*, int)’:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/basic_string.h:4170:23: error: ‘__stoa’ is not a member of ‘__gnu_cxx’
4170 | { return __gnu_cxx::__stoa(&std::strtol, "stol", __str.c_str(),
| ^~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/basic_string.h:4170:36: error: ‘strtol’ is not a member of ‘std’
4170 | { return __gnu_cxx::__stoa(&std::strtol, "stol", __str.c_str(),
| ^~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/basic_string.h: In function ‘long unsigned int std::__cxx11::stoul(const std::string&, std::size_t*, int)’:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/basic_string.h:4175:23: error: ‘__stoa’ is not a member of ‘__gnu_cxx’
4175 | { return __gnu_cxx::__stoa(&std::strtoul, "stoul", __str.c_str(),
| ^~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/basic_string.h:4175:36: error: ‘strtoul’ is not a member of ‘std’
4175 | { return __gnu_cxx::__stoa(&std::strtoul, "stoul", __str.c_str(),
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/basic_string.h: In function ‘long long int std::__cxx11::stoll(const std::string&, std::size_t*, int)’:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/basic_string.h:4181:23: error: ‘__stoa’ is not a member of ‘__gnu_cxx’
4181 | { return __gnu_cxx::__stoa(&std::strtoll, "stoll", __str.c_str(),
| ^~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/basic_string.h:4181:36: error: ‘strtoll’ is not a member of ‘std’
4181 | { return __gnu_cxx::__stoa(&std::strtoll, "stoll", __str.c_str(),
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/basic_string.h: In function ‘long long unsigned int std::__cxx11::stoull(const std::string&, std::size_t*, int)’:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/basic_string.h:4186:23: error: ‘__stoa’ is not a member of ‘__gnu_cxx’
4186 | { return __gnu_cxx::__stoa(&std::strtoull, "stoull", __str.c_str(),
| ^~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/basic_string.h:4186:36: error: ‘strtoull’ is not a member of ‘std’
4186 | { return __gnu_cxx::__stoa(&std::strtoull, "stoull", __str.c_str(),
| ^~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/basic_string.h: In function ‘double std::__cxx11::stod(const std::string&, std::size_t*)’:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/basic_string.h:4200:23: error: ‘__stoa’ is not a member of ‘__gnu_cxx’
4200 | { return __gnu_cxx::__stoa(&std::strtod, "stod", __str.c_str(), __idx); }
| ^~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/basic_string.h:4200:36: error: ‘strtod’ is not a member of ‘std’
4200 | { return __gnu_cxx::__stoa(&std::strtod, "stod", __str.c_str(), __idx); }
| ^~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/basic_string.h: In function ‘float std::__cxx11::stof(const std::string&, std::size_t*)’:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/basic_string.h:4206:23: error: ‘__stoa’ is not a member of ‘__gnu_cxx’
4206 | { return __gnu_cxx::__stoa(&std::strtof, "stof", __str.c_str(), __idx); }
| ^~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/basic_string.h:4206:36: error: ‘strtof’ is not a member of ‘std’
4206 | { return __gnu_cxx::__stoa(&std::strtof, "stof", __str.c_str(), __idx); }
| ^~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/basic_string.h: In function ‘long double std::__cxx11::stold(const std::string&, std::size_t*)’:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/basic_string.h:4228:23: error: ‘__stoa’ is not a member of ‘__gnu_cxx’
4228 | { return __gnu_cxx::__stoa(&std::strtold, "stold", __str.c_str(), __idx); }
| ^~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/basic_string.h:4228:36: error: ‘strtold’ is not a member of ‘std’
4228 | { return __gnu_cxx::__stoa(&std::strtold, "stold", __str.c_str(), __idx); }
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/basic_string.h: In function ‘std::string std::__cxx11::to_string(float)’:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/basic_string.h:4405:23: error: ‘__to_xstring’ is not a member of ‘__gnu_cxx’
4405 | return __gnu_cxx::__to_xstring<string>(&std::vsnprintf, __n,
| ^~~~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/basic_string.h:4405:42: error: expected primary-expression before ‘>’ token
4405 | return __gnu_cxx::__to_xstring<string>(&std::vsnprintf, __n,
| ^
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/basic_string.h:4405:50: error: ‘vsnprintf’ is not a member of ‘std’; did you mean ‘isprint’?
4405 | return __gnu_cxx::__to_xstring<string>(&std::vsnprintf, __n,
| ^~~~~~~~~
| isprint
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/basic_string.h: In function ‘std::string std::__cxx11::to_string(double)’:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/basic_string.h:4415:23: error: ‘__to_xstring’ is not a member of ‘__gnu_cxx’
4415 | return __gnu_cxx::__to_xstring<string>(&std::vsnprintf, __n,
| ^~~~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/basic_string.h:4415:42: error: expected primary-expression before ‘>’ token
4415 | return __gnu_cxx::__to_xstring<string>(&std::vsnprintf, __n,
| ^
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/basic_string.h:4415:50: error: ‘vsnprintf’ is not a member of ‘std’; did you mean ‘isprint’?
4415 | return __gnu_cxx::__to_xstring<string>(&std::vsnprintf, __n,
| ^~~~~~~~~
| isprint
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/basic_string.h: In function ‘std::string std::__cxx11::to_string(long double)’:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/basic_string.h:4425:23: error: ‘__to_xstring’ is not a member of ‘__gnu_cxx’
4425 | return __gnu_cxx::__to_xstring<string>(&std::vsnprintf, __n,
| ^~~~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/basic_string.h:4425:42: error: expected primary-expression before ‘>’ token
4425 | return __gnu_cxx::__to_xstring<string>(&std::vsnprintf, __n,
| ^
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/basic_string.h:4425:50: error: ‘vsnprintf’ is not a member of ‘std’; did you mean ‘isprint’?
4425 | return __gnu_cxx::__to_xstring<string>(&std::vsnprintf, __n,
| ^~~~~~~~~
| isprint
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/basic_string.h: In function ‘int std::__cxx11::stoi(const std::wstring&, std::size_t*, int)’:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/basic_string.h:4433:23: error: ‘__stoa’ is not a member of ‘__gnu_cxx’
4433 | { return __gnu_cxx::__stoa<long, int>(&std::wcstol, "stoi", __str.c_str(),
| ^~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/basic_string.h:4433:30: error: expected primary-expression before ‘long’
4433 | { return __gnu_cxx::__stoa<long, int>(&std::wcstol, "stoi", __str.c_str(),
| ^~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/basic_string.h:4433:30: error: expected ‘;’ before ‘long’
4433 | { return __gnu_cxx::__stoa<long, int>(&std::wcstol, "stoi", __str.c_str(),
| ^~~~
| ;
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/basic_string.h:4433:34: error: expected unqualified-id before ‘,’ token
4433 | { return __gnu_cxx::__stoa<long, int>(&std::wcstol, "stoi", __str.c_str(),
| ^
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/basic_string.h:4433:36: error: expected unqualified-id before ‘int’
4433 | { return __gnu_cxx::__stoa<long, int>(&std::wcstol, "stoi", __str.c_str(),
| ^~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/basic_string.h: In function ‘long int std::__cxx11::stol(const std::wstring&, std::size_t*, int)’:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/basic_string.h:4438:23: error: ‘__stoa’ is not a member of ‘__gnu_cxx’
4438 | { return __gnu_cxx::__stoa(&std::wcstol, "stol", __str.c_str(),
| ^~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/basic_string.h:4438:36: error: ‘wcstol’ is not a member of ‘std’
4438 | { return __gnu_cxx::__stoa(&std::wcstol, "stol", __str.c_str(),
| ^~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/basic_string.h: In function ‘long unsigned int std::__cxx11::stoul(const std::wstring&, std::size_t*, int)’:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/basic_string.h:4443:23: error: ‘__stoa’ is not a member of ‘__gnu_cxx’
4443 | { return __gnu_cxx::__stoa(&std::wcstoul, "stoul", __str.c_str(),
| ^~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/basic_string.h:4443:36: error: ‘wcstoul’ is not a member of ‘std’
4443 | { return __gnu_cxx::__stoa(&std::wcstoul, "stoul", __str.c_str(),
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/basic_string.h: In function ‘long long int std::__cxx11::stoll(const std::wstring&, std::size_t*, int)’:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/basic_string.h:4448:23: error: ‘__stoa’ is not a member of ‘__gnu_cxx’
4448 | { return __gnu_cxx::__stoa(&std::wcstoll, "stoll", __str.c_str(),
| ^~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/basic_string.h:4448:36: error: ‘wcstoll’ is not a member of ‘std’
4448 | { return __gnu_cxx::__stoa(&std::wcstoll, "stoll", __str.c_str(),
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/basic_string.h: In function ‘long long unsigned int std::__cxx11::stoull(const std::wstring&, std::size_t*, int)’:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/basic_string.h:4453:23: error: ‘__stoa’ is not a member of ‘__gnu_cxx’
4453 | { return __gnu_cxx::__stoa(&std::wcstoull, "stoull", __str.c_str(),
| ^~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/basic_string.h:4453:36: error: ‘wcstoull’ is not a member of ‘std’
4453 | { return __gnu_cxx::__stoa(&std::wcstoull, "stoull", __str.c_str(),
| ^~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/basic_string.h: In function ‘float std::__cxx11::stof(const std::wstring&, std::size_t*)’:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/basic_string.h:4459:23: error: ‘__stoa’ is not a member of ‘__gnu_cxx’
4459 | { return __gnu_cxx::__stoa(&std::wcstof, "stof", __str.c_str(), __idx); }
| ^~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/basic_string.h:4459:36: error: ‘wcstof’ is not a member of ‘std’
4459 | { return __gnu_cxx::__stoa(&std::wcstof, "stof", __str.c_str(), __idx); }
| ^~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/basic_string.h: In function ‘double std::__cxx11::stod(const std::wstring&, std::size_t*)’:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/basic_string.h:4463:23: error: ‘__stoa’ is not a member of ‘__gnu_cxx’
4463 | { return __gnu_cxx::__stoa(&std::wcstod, "stod", __str.c_str(), __idx); }
| ^~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/basic_string.h:4463:36: error: ‘wcstod’ is not a member of ‘std’
4463 | { return __gnu_cxx::__stoa(&std::wcstod, "stod", __str.c_str(), __idx); }
| ^~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/basic_string.h: In function ‘long double std::__cxx11::stold(const std::wstring&, std::size_t*)’:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/basic_string.h:4467:23: error: ‘__stoa’ is not a member of ‘__gnu_cxx’
4467 | { return __gnu_cxx::__stoa(&std::wcstold, "stold", __str.c_str(), __idx); }
| ^~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/basic_string.h:4467:36: error: ‘wcstold’ is not a member of ‘std’
4467 | { return __gnu_cxx::__stoa(&std::wcstold, "stold", __str.c_str(), __idx); }
| ^~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/macros/macros.h: In function ‘std::string Rcpp::internal::debug::short_file_name(const char*)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/macros/macros.h:34:5: error: ‘size_t’ was not declared in this scope; did you mean ‘std::size_t’?
34 | size_t index = f.find("/include/");
| ^~~~~~
| std::size_t
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/c++config.h:310:33: note: ‘std::size_t’ declared here
310 | typedef __SIZE_TYPE__ size_t;
| ^~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/macros/macros.h:35:9: error: ‘index’ was not declared in this scope
35 | if (index != std::string::npos)
| ^~~~~
In file included from /home/biocbuild/R/R-4.5.0/include/R.h:74:
/home/biocbuild/R/R-4.5.0/include/R_ext/Memory.h: At global scope:
/home/biocbuild/R/R-4.5.0/include/R_ext/Memory.h:55:21: error: ‘size_t’ was not declared in this scope; did you mean ‘std::size_t’?
55 | void * R_malloc_gc(size_t);
| ^~~~~~
| std::size_t
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/c++config.h:310:33: note: ‘std::size_t’ declared here
310 | typedef __SIZE_TYPE__ size_t;
| ^~~~~~
/home/biocbuild/R/R-4.5.0/include/R_ext/Memory.h:56:21: error: ‘size_t’ was not declared in this scope; did you mean ‘std::size_t’?
56 | void * R_calloc_gc(size_t, size_t);
| ^~~~~~
| std::size_t
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/c++config.h:310:33: note: ‘std::size_t’ declared here
310 | typedef __SIZE_TYPE__ size_t;
| ^~~~~~
/home/biocbuild/R/R-4.5.0/include/R_ext/Memory.h:56:29: error: ‘size_t’ was not declared in this scope; did you mean ‘std::size_t’?
56 | void * R_calloc_gc(size_t, size_t);
| ^~~~~~
| std::size_t
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/c++config.h:310:33: note: ‘std::size_t’ declared here
310 | typedef __SIZE_TYPE__ size_t;
| ^~~~~~
/home/biocbuild/R/R-4.5.0/include/R_ext/Memory.h:56:35: error: expression list treated as compound expression in initializer [-fpermissive]
56 | void * R_calloc_gc(size_t, size_t);
| ^
/home/biocbuild/R/R-4.5.0/include/R_ext/Memory.h:57:30: error: ‘size_t’ has not been declared
57 | void * R_realloc_gc(void *, size_t);
| ^~~~~~
/usr/include/string.h:28:1: error: ‘__BEGIN_DECLS’ does not name a type
28 | __BEGIN_DECLS
| ^~~~~~~~~~~~~
/usr/include/string.h:47:56: error: ‘size_t’ has not been declared
47 | extern void *memmove (void *__dest, const void *__src, size_t __n)
| ^~~~~~
/usr/include/string.h:48:6: error: expected initializer before ‘__THROW’
48 | __THROW __nonnull ((1, 2));
| ^~~~~~~
/usr/include/string.h:61:42: error: ‘size_t’ has not been declared
61 | extern void *memset (void *__s, int __c, size_t __n) __THROW __nonnull ((1));
| ^~~~~~
/usr/include/string.h:61:54: error: expected initializer before ‘__THROW’
61 | extern void *memset (void *__s, int __c, size_t __n) __THROW __nonnull ((1));
| ^~~~~~~
/usr/include/string.h:64:56: error: ‘size_t’ has not been declared
64 | extern int memcmp (const void *__s1, const void *__s2, size_t __n)
| ^~~~~~
/usr/include/string.h:65:6: error: expected initializer before ‘__THROW’
65 | __THROW __attribute_pure__ __nonnull ((1, 2));
| ^~~~~~~
/usr/include/string.h:80:60: error: ‘size_t’ has not been declared
80 | extern int __memcmpeq (const void *__s1, const void *__s2, size_t __n)
| ^~~~~~
/usr/include/string.h:81:6: error: expected initializer before ‘__THROW’
81 | __THROW __attribute_pure__ __nonnull ((1, 2));
| ^~~~~~~
/usr/include/string.h:107:48: error: ‘size_t’ has not been declared
107 | extern void *memchr (const void *__s, int __c, size_t __n)
| ^~~~~~
/usr/include/string.h:108:7: error: expected initializer before ‘__THROW’
108 | __THROW __attribute_pure__ __nonnull ((1));
| ^~~~~~~
/usr/include/string.h:142:6: error: expected initializer before ‘__THROW’
142 | __THROW __nonnull ((1, 2));
| ^~~~~~~
/usr/include/string.h:145:53: error: ‘size_t’ has not been declared
145 | const char *__restrict __src, size_t __n)
| ^~~~~~
/usr/include/string.h:146:6: error: expected initializer before ‘__THROW’
146 | __THROW __nonnull ((1, 2));
| ^~~~~~~
/usr/include/string.h:150:6: error: expected initializer before ‘__THROW’
150 | __THROW __nonnull ((1, 2));
| ^~~~~~~
/usr/include/string.h:153:23: error: ‘size_t’ has not been declared
153 | size_t __n) __THROW __nonnull ((1, 2));
| ^~~~~~
/usr/include/string.h:153:35: error: expected initializer before ‘__THROW’
153 | size_t __n) __THROW __nonnull ((1, 2));
| ^~~~~~~
/usr/include/string.h:157:6: error: expected initializer before ‘__THROW’
157 | __THROW __attribute_pure__ __nonnull ((1, 2));
| ^~~~~~~
/usr/include/string.h:159:57: error: ‘size_t’ has not been declared
159 | extern int strncmp (const char *__s1, const char *__s2, size_t __n)
| ^~~~~~
/usr/include/string.h:160:6: error: expected initializer before ‘__THROW’
160 | __THROW __attribute_pure__ __nonnull ((1, 2));
| ^~~~~~~
/usr/include/string.h:164:6: error: expected initializer before ‘__THROW’
164 | __THROW __attribute_pure__ __nonnull ((1, 2));
| ^~~~~~~
/usr/include/string.h:166:8: error: ‘size_t’ does not name a type
166 | extern size_t strxfrm (char *__restrict __dest,
| ^~~~~~
/usr/include/string.h:34:1: note: ‘size_t’ is defined in header ‘<cstddef>’; this is probably fixable by adding ‘#include <cstddef>’
33 | #include <stddef.h>
+++ |+#include <cstddef>
34 |
/usr/include/string.h:247:6: error: expected initializer before ‘__THROW’
247 | __THROW __attribute_pure__ __nonnull ((1));
| ^~~~~~~
/usr/include/string.h:274:6: error: expected initializer before ‘__THROW’
274 | __THROW __attribute_pure__ __nonnull ((1));
| ^~~~~~~
/usr/include/string.h:293:8: error: ‘size_t’ does not name a type
293 | extern size_t strcspn (const char *__s, const char *__reject)
| ^~~~~~
/usr/include/string.h:293:8: note: ‘size_t’ is defined in header ‘<cstddef>’; this is probably fixable by adding ‘#include <cstddef>’
/usr/include/string.h:297:8: error: ‘size_t’ does not name a type
297 | extern size_t strspn (const char *__s, const char *__accept)
| ^~~~~~
/usr/include/string.h:297:8: note: ‘size_t’ is defined in header ‘<cstddef>’; this is probably fixable by adding ‘#include <cstddef>’
/usr/include/string.h:324:6: error: expected initializer before ‘__THROW’
324 | __THROW __attribute_pure__ __nonnull ((1, 2));
| ^~~~~~~
/usr/include/string.h:351:6: error: expected initializer before ‘__THROW’
351 | __THROW __attribute_pure__ __nonnull ((1, 2));
| ^~~~~~~
/usr/include/string.h:357:6: error: expected initializer before ‘__THROW’
357 | __THROW __nonnull ((2));
| ^~~~~~~
/usr/include/string.h:364:6: error: expected initializer before ‘__THROW’
364 | __THROW __nonnull ((2, 3));
| ^~~~~~~
/usr/include/string.h:407:8: error: ‘size_t’ does not name a type
407 | extern size_t strlen (const char *__s)
| ^~~~~~
/usr/include/string.h:407:8: note: ‘size_t’ is defined in header ‘<cstddef>’; this is probably fixable by adding ‘#include <cstddef>’
/usr/include/string.h:419:38: error: expected initializer before ‘__THROW’
419 | extern char *strerror (int __errnum) __THROW;
| ^~~~~~~
/usr/include/string.h:552:1: error: ‘__END_DECLS’ does not name a type
552 | __END_DECLS
| ^~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/include/Rinternals.h:774:53: error: ‘std::FILE’ has not been declared
774 | void R_InitFileInPStream(R_inpstream_t stream, std::FILE *fp,
| ^~~~
/home/biocbuild/R/R-4.5.0/include/Rinternals.h:777:55: error: ‘std::FILE’ has not been declared
777 | void R_InitFileOutPStream(R_outpstream_t stream, std::FILE *fp,
| ^~~~
/usr/include/time.h:68:1: error: ‘__BEGIN_DECLS’ does not name a type
68 | __BEGIN_DECLS
| ^~~~~~~~~~~~~
/usr/include/time.h:76:38: error: expected initializer before ‘__THROW’
76 | extern time_t time (time_t *__timer) __THROW;
| ^~~~~~~
/usr/include/time.h:80:6: error: expected initializer before ‘__THROW’
80 | __THROW __attribute__ ((__const__));
| ^~~~~~~
/usr/include/time.h:83:40: error: expected initializer before ‘__THROW’
83 | extern time_t mktime (struct tm *__tp) __THROW;
| ^~~~~~~
/usr/include/time.h:100:8: error: ‘size_t’ does not name a type
100 | extern size_t strftime (char *__restrict __s, size_t __maxsize,
| ^~~~~~
/usr/include/time.h:40:1: note: ‘size_t’ is defined in header ‘<cstddef>’; this is probably fixable by adding ‘#include <cstddef>’
39 | #include <bits/types/struct_tm.h>
+++ |+#include <cstddef>
40 |
/usr/include/time.h:133:50: error: expected initializer before ‘__THROW’
133 | extern struct tm *gmtime (const time_t *__timer) __THROW;
| ^~~~~~~
/usr/include/time.h:137:53: error: expected initializer before ‘__THROW’
137 | extern struct tm *localtime (const time_t *__timer) __THROW;
| ^~~~~~~
/usr/include/time.h:180:46: error: expected initializer before ‘__THROW’
180 | extern char *asctime (const struct tm *__tp) __THROW;
| ^~~~~~~
/usr/include/time.h:184:44: error: expected initializer before ‘__THROW’
184 | extern char *ctime (const time_t *__timer) __THROW;
| ^~~~~~~
/usr/include/time.h:453:1: error: ‘__END_DECLS’ does not name a type
453 | __END_DECLS
| ^~~~~~~~~~~
In file included from /usr/include/sched.h:43:
/usr/include/bits/sched.h:82:1: error: ‘__BEGIN_DECLS’ does not name a type
82 | __BEGIN_DECLS
| ^~~~~~~~~~~~~
/usr/include/bits/cpu-set.h:41:3: error: ‘__cpu_mask’ does not name a type
41 | __cpu_mask __bits[__CPU_SETSIZE / __NCPUBITS];
| ^~~~~~~~~~
/usr/include/bits/cpu-set.h:115:1: error: ‘__BEGIN_DECLS’ does not name a type
115 | __BEGIN_DECLS
| ^~~~~~~~~~~~~
/usr/include/bits/cpu-set.h:119:37: error: ‘size_t’ was not declared in this scope; did you mean ‘std::size_t’?
119 | extern cpu_set_t *__sched_cpualloc (size_t __count) __THROW __wur;
| ^~~~~~
| std::size_t
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/c++config.h:310:33: note: ‘std::size_t’ declared here
310 | typedef __SIZE_TYPE__ size_t;
| ^~~~~~
/usr/include/bits/cpu-set.h:120:48: error: expected initializer before ‘__THROW’
120 | extern void __sched_cpufree (cpu_set_t *__set) __THROW;
| ^~~~~~~
/usr/include/bits/cpu-set.h:122:1: error: ‘__END_DECLS’ does not name a type
122 | __END_DECLS
| ^~~~~~~~~~~
/usr/include/sched.h:58:72: error: expected initializer before ‘__THROW’
58 | extern int sched_getparam (__pid_t __pid, struct sched_param *__param) __THROW;
| ^~~~~~~
/usr/include/sched.h:62:67: error: expected initializer before ‘__THROW’
62 | const struct sched_param *__param) __THROW;
| ^~~~~~~
/usr/include/sched.h:65:47: error: expected initializer before ‘__THROW’
65 | extern int sched_getscheduler (__pid_t __pid) __THROW;
| ^~~~~~~
/usr/include/sched.h:68:31: error: expected initializer before ‘__THROW’
68 | extern int sched_yield (void) __THROW;
| ^~~~~~~
/usr/include/sched.h:71:53: error: expected initializer before ‘__THROW’
71 | extern int sched_get_priority_max (int __algorithm) __THROW;
| ^~~~~~~
/usr/include/sched.h:74:53: error: expected initializer before ‘__THROW’
74 | extern int sched_get_priority_min (int __algorithm) __THROW;
| ^~~~~~~
/usr/include/sched.h:78:72: error: expected initializer before ‘__THROW’
78 | extern int sched_rr_get_interval (__pid_t __pid, struct timespec *__t) __THROW;
| ^~~~~~~
/usr/include/sched.h:138:1: error: ‘__END_DECLS’ does not name a type
138 | __END_DECLS
| ^~~~~~~~~~~
In file included from /usr/include/bits/thread-shared-types.h:46,
from /usr/include/bits/pthreadtypes.h:23,
from /opt/ohpc/pub/compiler/gcc/14.2.0/lib/gcc/aarch64-unknown-linux-gnu/14.2.0/include-fixed/pthread.h:35:
/usr/include/bits/atomic_wide_counter.h:33:3: error: ‘__atomic_wide_counter’ does not name a type
33 | } __atomic_wide_counter;
| ^~~~~~~~~~~~~~~~~~~~~
/usr/include/bits/thread-shared-types.h:96:3: error: ‘__atomic_wide_counter’ does not name a type
96 | __atomic_wide_counter __wseq;
| ^~~~~~~~~~~~~~~~~~~~~
/usr/include/bits/thread-shared-types.h:97:3: error: ‘__atomic_wide_counter’ does not name a type
97 | __atomic_wide_counter __g1_start;
| ^~~~~~~~~~~~~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/lib/gcc/aarch64-unknown-linux-gnu/14.2.0/include-fixed/pthread.h:206:1: error: ‘__BEGIN_DECLS’ does not name a type
206 | __BEGIN_DECLS
| ^~~~~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/lib/gcc/aarch64-unknown-linux-gnu/14.2.0/include-fixed/pthread.h:278:44: error: expected initializer before ‘__THROW’
278 | extern int pthread_detach (pthread_t __th) __THROW;
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/lib/gcc/aarch64-unknown-linux-gnu/14.2.0/include-fixed/pthread.h:282:38: error: expected initializer before ‘__THROW’
282 | extern pthread_t pthread_self (void) __THROW __attribute__ ((__const__));
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/lib/gcc/aarch64-unknown-linux-gnu/14.2.0/include-fixed/pthread.h:286:3: error: expected initializer before ‘__THROW’
286 | __THROW __attribute__ ((__const__));
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/lib/gcc/aarch64-unknown-linux-gnu/14.2.0/include-fixed/pthread.h:294:55: error: expected initializer before ‘__THROW’
294 | extern int pthread_attr_init (pthread_attr_t *__attr) __THROW __nonnull ((1));
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/lib/gcc/aarch64-unknown-linux-gnu/14.2.0/include-fixed/pthread.h:298:6: error: expected initializer before ‘__THROW’
298 | __THROW __nonnull ((1));
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/lib/gcc/aarch64-unknown-linux-gnu/14.2.0/include-fixed/pthread.h:303:6: error: expected initializer before ‘__THROW’
303 | __THROW __nonnull ((1, 2));
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/lib/gcc/aarch64-unknown-linux-gnu/14.2.0/include-fixed/pthread.h:308:6: error: expected initializer before ‘__THROW’
308 | __THROW __nonnull ((1));
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/lib/gcc/aarch64-unknown-linux-gnu/14.2.0/include-fixed/pthread.h:313:39: error: ‘size_t’ has not been declared
313 | size_t *__guardsize)
| ^~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/lib/gcc/aarch64-unknown-linux-gnu/14.2.0/include-fixed/pthread.h:314:6: error: expected initializer before ‘__THROW’
314 | __THROW __nonnull ((1, 2));
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/lib/gcc/aarch64-unknown-linux-gnu/14.2.0/include-fixed/pthread.h:318:39: error: ‘size_t’ has not been declared
318 | size_t __guardsize)
| ^~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/lib/gcc/aarch64-unknown-linux-gnu/14.2.0/include-fixed/pthread.h:319:6: error: expected initializer before ‘__THROW’
319 | __THROW __nonnull ((1));
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/lib/gcc/aarch64-unknown-linux-gnu/14.2.0/include-fixed/pthread.h:325:6: error: expected initializer before ‘__THROW’
325 | __THROW __nonnull ((1, 2));
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/lib/gcc/aarch64-unknown-linux-gnu/14.2.0/include-fixed/pthread.h:330:49: error: expected initializer before ‘__THROW’
330 | __param) __THROW __nonnull ((1, 2));
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/lib/gcc/aarch64-unknown-linux-gnu/14.2.0/include-fixed/pthread.h:335:6: error: expected initializer before ‘__THROW’
335 | __THROW __nonnull ((1, 2));
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/lib/gcc/aarch64-unknown-linux-gnu/14.2.0/include-fixed/pthread.h:339:6: error: expected initializer before ‘__THROW’
339 | __THROW __nonnull ((1));
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/lib/gcc/aarch64-unknown-linux-gnu/14.2.0/include-fixed/pthread.h:344:6: error: expected initializer before ‘__THROW’
344 | __THROW __nonnull ((1, 2));
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/lib/gcc/aarch64-unknown-linux-gnu/14.2.0/include-fixed/pthread.h:349:6: error: expected initializer before ‘__THROW’
349 | __THROW __nonnull ((1));
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/lib/gcc/aarch64-unknown-linux-gnu/14.2.0/include-fixed/pthread.h:355:6: error: expected initializer before ‘__THROW’
355 | __THROW __nonnull ((1, 2));
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/lib/gcc/aarch64-unknown-linux-gnu/14.2.0/include-fixed/pthread.h:359:6: error: expected initializer before ‘__THROW’
359 | __THROW __nonnull ((1));
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/lib/gcc/aarch64-unknown-linux-gnu/14.2.0/include-fixed/pthread.h:364:6: error: expected initializer before ‘__THROW’
364 | __THROW __nonnull ((1, 2)) __attribute_deprecated__;
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/lib/gcc/aarch64-unknown-linux-gnu/14.2.0/include-fixed/pthread.h:372:6: error: expected initializer before ‘__THROW’
372 | __THROW __nonnull ((1)) __attribute_deprecated__;
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/lib/gcc/aarch64-unknown-linux-gnu/14.2.0/include-fixed/pthread.h:376:47: error: ‘size_t’ has not been declared
376 | __attr, size_t *__restrict __stacksize)
| ^~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/lib/gcc/aarch64-unknown-linux-gnu/14.2.0/include-fixed/pthread.h:377:6: error: expected initializer before ‘__THROW’
377 | __THROW __nonnull ((1, 2));
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/lib/gcc/aarch64-unknown-linux-gnu/14.2.0/include-fixed/pthread.h:383:39: error: ‘size_t’ has not been declared
383 | size_t __stacksize)
| ^~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/lib/gcc/aarch64-unknown-linux-gnu/14.2.0/include-fixed/pthread.h:384:6: error: expected initializer before ‘__THROW’
384 | __THROW __nonnull ((1));
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/lib/gcc/aarch64-unknown-linux-gnu/14.2.0/include-fixed/pthread.h:452:6: error: expected initializer before ‘__THROW’
452 | __THROW __nonnull ((3));
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/lib/gcc/aarch64-unknown-linux-gnu/14.2.0/include-fixed/pthread.h:458:6: error: expected initializer before ‘__THROW’
458 | __THROW __nonnull ((2, 3));
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/lib/gcc/aarch64-unknown-linux-gnu/14.2.0/include-fixed/pthread.h:462:6: error: expected initializer before ‘__THROW’
462 | __THROW;
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/lib/gcc/aarch64-unknown-linux-gnu/14.2.0/include-fixed/pthread.h:519:57: error: expected initializer before ‘__nonnull’
519 | void (*__init_routine) (void)) __nonnull ((1, 2));
| ^~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/lib/gcc/aarch64-unknown-linux-gnu/14.2.0/include-fixed/pthread.h:783:41: error: expected initializer before ‘__THROWNL’
783 | int __savemask) __THROWNL;
| ^~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/lib/gcc/aarch64-unknown-linux-gnu/14.2.0/include-fixed/pthread.h:792:6: error: expected initializer before ‘__THROW’
792 | __THROW __nonnull ((1));
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/lib/gcc/aarch64-unknown-linux-gnu/14.2.0/include-fixed/pthread.h:796:6: error: expected initializer before ‘__THROW’
796 | __THROW __nonnull ((1));
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/lib/gcc/aarch64-unknown-linux-gnu/14.2.0/include-fixed/pthread.h:800:6: error: expected initializer before ‘__THROWNL’
800 | __THROWNL __nonnull ((1));
| ^~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/lib/gcc/aarch64-unknown-linux-gnu/14.2.0/include-fixed/pthread.h:804:6: error: expected initializer before ‘__THROWNL’
804 | __THROWNL __nonnull ((1));
| ^~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/lib/gcc/aarch64-unknown-linux-gnu/14.2.0/include-fixed/pthread.h:845:6: error: expected initializer before ‘__THROWNL’
845 | __THROWNL __nonnull ((1));
| ^~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/lib/gcc/aarch64-unknown-linux-gnu/14.2.0/include-fixed/pthread.h:852:6: error: expected initializer before ‘__THROW’
852 | __THROW __nonnull ((1, 2));
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/lib/gcc/aarch64-unknown-linux-gnu/14.2.0/include-fixed/pthread.h:859:6: error: expected initializer before ‘__THROW’
859 | __THROW __nonnull ((1, 3));
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/lib/gcc/aarch64-unknown-linux-gnu/14.2.0/include-fixed/pthread.h:884:6: error: expected initializer before ‘__THROW’
884 | __THROW __nonnull ((1));
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/lib/gcc/aarch64-unknown-linux-gnu/14.2.0/include-fixed/pthread.h:888:6: error: expected initializer before ‘__THROW’
888 | __THROW __nonnull ((1));
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/lib/gcc/aarch64-unknown-linux-gnu/14.2.0/include-fixed/pthread.h:894:6: error: expected initializer before ‘__THROW’
894 | __THROW __nonnull ((1, 2));
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/lib/gcc/aarch64-unknown-linux-gnu/14.2.0/include-fixed/pthread.h:899:6: error: expected initializer before ‘__THROW’
899 | __THROW __nonnull ((1));
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/lib/gcc/aarch64-unknown-linux-gnu/14.2.0/include-fixed/pthread.h:918:6: error: expected initializer before ‘__THROW’
918 | __THROW __nonnull ((1, 2));
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/lib/gcc/aarch64-unknown-linux-gnu/14.2.0/include-fixed/pthread.h:924:6: error: expected initializer before ‘__THROW’
924 | __THROW __nonnull ((1));
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/lib/gcc/aarch64-unknown-linux-gnu/14.2.0/include-fixed/pthread.h:930:6: error: expected initializer before ‘__THROW’
930 | __THROW __nonnull ((1, 2));
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/lib/gcc/aarch64-unknown-linux-gnu/14.2.0/include-fixed/pthread.h:935:6: error: expected initializer before ‘__THROW’
935 | __THROW __nonnull ((1));
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/lib/gcc/aarch64-unknown-linux-gnu/14.2.0/include-fixed/pthread.h:1123:6: error: expected initializer before ‘__THROW’
1123 | __THROW __nonnull ((1));
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/lib/gcc/aarch64-unknown-linux-gnu/14.2.0/include-fixed/pthread.h:1127:6: error: expected initializer before ‘__THROW’
1127 | __THROW __nonnull ((1));
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/lib/gcc/aarch64-unknown-linux-gnu/14.2.0/include-fixed/pthread.h:1131:6: error: expected initializer before ‘__THROWNL’
1131 | __THROWNL __nonnull ((1));
| ^~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/lib/gcc/aarch64-unknown-linux-gnu/14.2.0/include-fixed/pthread.h:1135:6: error: expected initializer before ‘__THROWNL’
1135 | __THROWNL __nonnull ((1));
| ^~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/lib/gcc/aarch64-unknown-linux-gnu/14.2.0/include-fixed/pthread.h:1144:6: error: expected initializer before ‘__nonnull’
1144 | __nonnull ((1, 2));
| ^~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/lib/gcc/aarch64-unknown-linux-gnu/14.2.0/include-fixed/pthread.h:1157:6: error: expected initializer before ‘__nonnull’
1157 | __nonnull ((1, 2, 3));
| ^~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/lib/gcc/aarch64-unknown-linux-gnu/14.2.0/include-fixed/pthread.h:1204:6: error: expected initializer before ‘__THROW’
1204 | __THROW __nonnull ((1));
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/lib/gcc/aarch64-unknown-linux-gnu/14.2.0/include-fixed/pthread.h:1208:6: error: expected initializer before ‘__THROW’
1208 | __THROW __nonnull ((1));
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/lib/gcc/aarch64-unknown-linux-gnu/14.2.0/include-fixed/pthread.h:1214:6: error: expected initializer before ‘__THROW’
1214 | __THROW __nonnull ((1, 2));
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/lib/gcc/aarch64-unknown-linux-gnu/14.2.0/include-fixed/pthread.h:1218:56: error: expected initializer before ‘__THROW’
1218 | int __pshared) __THROW __nonnull ((1));
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/lib/gcc/aarch64-unknown-linux-gnu/14.2.0/include-fixed/pthread.h:1308:6: error: expected initializer before ‘__THROW’
1308 | __THROW __nonnull ((1));
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/lib/gcc/aarch64-unknown-linux-gnu/14.2.0/include-fixed/pthread.h:1311:53: error: expected initializer before ‘__THROW’
1311 | extern int pthread_key_delete (pthread_key_t __key) __THROW;
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/lib/gcc/aarch64-unknown-linux-gnu/14.2.0/include-fixed/pthread.h:1314:56: error: expected initializer before ‘__THROW’
1314 | extern void *pthread_getspecific (pthread_key_t __key) __THROW;
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/lib/gcc/aarch64-unknown-linux-gnu/14.2.0/include-fixed/pthread.h:1319:3: error: expected initializer before ‘__THROW’
1319 | __THROW __attr_access_none (2);
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/lib/gcc/aarch64-unknown-linux-gnu/14.2.0/include-fixed/pthread.h:1343:52: error: expected initializer before ‘__THROW’
1343 | void (*__child) (void)) __THROW;
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/lib/gcc/aarch64-unknown-linux-gnu/14.2.0/include-fixed/pthread.h:1355:1: error: ‘__END_DECLS’ does not name a type
1355 | __END_DECLS
| ^~~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h:108:1: error: ‘pthread_once’ was not declared in this scope; did you mean ‘pthread_once_t’?
108 | __gthrw(pthread_once)
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h:108:1: error: ‘pthread_once’ was not declared in this scope; did you mean ‘pthread_once_t’?
108 | __gthrw(pthread_once)
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h:109:1: error: ‘pthread_getspecific’ was not declared in this scope
109 | __gthrw(pthread_getspecific)
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h:109:1: error: ‘pthread_getspecific’ was not declared in this scope
109 | __gthrw(pthread_getspecific)
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h:110:1: error: ‘pthread_setspecific’ was not declared in this scope
110 | __gthrw(pthread_setspecific)
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h:110:1: error: ‘pthread_setspecific’ was not declared in this scope
110 | __gthrw(pthread_setspecific)
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h:112:1: error: ‘pthread_create’ was not declared in this scope; did you mean ‘pthread_t’?
112 | __gthrw(pthread_create)
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h:112:1: error: ‘pthread_create’ was not declared in this scope; did you mean ‘pthread_t’?
112 | __gthrw(pthread_create)
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h:114:1: error: ‘pthread_equal’ was not declared in this scope; did you mean ‘pthread_exit’?
114 | __gthrw(pthread_equal)
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h:114:1: error: ‘pthread_equal’ was not declared in this scope; did you mean ‘pthread_exit’?
114 | __gthrw(pthread_equal)
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h:115:1: error: ‘pthread_self’ was not declared in this scope; did you mean ‘pthread_t’?
115 | __gthrw(pthread_self)
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h:115:1: error: ‘pthread_self’ was not declared in this scope; did you mean ‘pthread_t’?
115 | __gthrw(pthread_self)
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h:116:1: error: ‘pthread_detach’ was not declared in this scope; did you mean ‘pthread_t’?
116 | __gthrw(pthread_detach)
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h:116:1: error: ‘pthread_detach’ was not declared in this scope; did you mean ‘pthread_t’?
116 | __gthrw(pthread_detach)
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h:120:1: error: ‘sched_yield’ was not declared in this scope
120 | __gthrw(sched_yield)
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h:120:1: error: ‘sched_yield’ was not declared in this scope
120 | __gthrw(sched_yield)
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h:122:1: error: ‘pthread_mutex_lock’ was not declared in this scope; did you mean ‘pthread_mutex_t’?
122 | __gthrw(pthread_mutex_lock)
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h:122:1: error: ‘pthread_mutex_lock’ was not declared in this scope; did you mean ‘pthread_mutex_t’?
122 | __gthrw(pthread_mutex_lock)
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h:123:1: error: ‘pthread_mutex_trylock’ was not declared in this scope; did you mean ‘pthread_mutex_t’?
123 | __gthrw(pthread_mutex_trylock)
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h:123:1: error: ‘pthread_mutex_trylock’ was not declared in this scope; did you mean ‘pthread_mutex_t’?
123 | __gthrw(pthread_mutex_trylock)
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h:125:1: error: ‘pthread_mutex_timedlock’ was not declared in this scope; did you mean ‘pthread_mutex_t’?
125 | __gthrw(pthread_mutex_timedlock)
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h:125:1: error: ‘pthread_mutex_timedlock’ was not declared in this scope; did you mean ‘pthread_mutex_t’?
125 | __gthrw(pthread_mutex_timedlock)
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h:127:1: error: ‘pthread_mutex_unlock’ was not declared in this scope; did you mean ‘pthread_mutex_t’?
127 | __gthrw(pthread_mutex_unlock)
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h:127:1: error: ‘pthread_mutex_unlock’ was not declared in this scope; did you mean ‘pthread_mutex_t’?
127 | __gthrw(pthread_mutex_unlock)
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h:128:1: error: ‘pthread_mutex_init’ was not declared in this scope; did you mean ‘pthread_mutex_t’?
128 | __gthrw(pthread_mutex_init)
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h:128:1: error: ‘pthread_mutex_init’ was not declared in this scope; did you mean ‘pthread_mutex_t’?
128 | __gthrw(pthread_mutex_init)
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h:129:1: error: ‘pthread_mutex_destroy’ was not declared in this scope; did you mean ‘pthread_mutexattr_t’?
129 | __gthrw(pthread_mutex_destroy)
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h:129:1: error: ‘pthread_mutex_destroy’ was not declared in this scope; did you mean ‘pthread_mutexattr_t’?
129 | __gthrw(pthread_mutex_destroy)
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h:131:1: error: ‘pthread_cond_init’ was not declared in this scope; did you mean ‘pthread_cond_t’?
131 | __gthrw(pthread_cond_init)
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h:131:1: error: ‘pthread_cond_init’ was not declared in this scope; did you mean ‘pthread_cond_t’?
131 | __gthrw(pthread_cond_init)
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h:132:1: error: ‘pthread_cond_broadcast’ was not declared in this scope; did you mean ‘pthread_condattr_t’?
132 | __gthrw(pthread_cond_broadcast)
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h:132:1: error: ‘pthread_cond_broadcast’ was not declared in this scope; did you mean ‘pthread_condattr_t’?
132 | __gthrw(pthread_cond_broadcast)
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h:133:1: error: ‘pthread_cond_signal’ was not declared in this scope; did you mean ‘pthread_cond_t’?
133 | __gthrw(pthread_cond_signal)
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h:133:1: error: ‘pthread_cond_signal’ was not declared in this scope; did you mean ‘pthread_cond_t’?
133 | __gthrw(pthread_cond_signal)
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h:134:1: error: ‘pthread_cond_wait’ was not declared in this scope; did you mean ‘pthread_cond_t’?
134 | __gthrw(pthread_cond_wait)
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h:134:1: error: ‘pthread_cond_wait’ was not declared in this scope; did you mean ‘pthread_cond_t’?
134 | __gthrw(pthread_cond_wait)
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h:135:1: error: ‘pthread_cond_timedwait’ was not declared in this scope; did you mean ‘pthread_condattr_t’?
135 | __gthrw(pthread_cond_timedwait)
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h:135:1: error: ‘pthread_cond_timedwait’ was not declared in this scope; did you mean ‘pthread_condattr_t’?
135 | __gthrw(pthread_cond_timedwait)
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h:136:1: error: ‘pthread_cond_destroy’ was not declared in this scope; did you mean ‘pthread_condattr_t’?
136 | __gthrw(pthread_cond_destroy)
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h:136:1: error: ‘pthread_cond_destroy’ was not declared in this scope; did you mean ‘pthread_condattr_t’?
136 | __gthrw(pthread_cond_destroy)
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h:138:1: error: ‘pthread_key_create’ was not declared in this scope; did you mean ‘pthread_key_t’?
138 | __gthrw(pthread_key_create)
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h:138:1: error: ‘pthread_key_create’ was not declared in this scope; did you mean ‘pthread_key_t’?
138 | __gthrw(pthread_key_create)
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h:139:1: error: ‘pthread_key_delete’ was not declared in this scope; did you mean ‘pthread_key_t’?
139 | __gthrw(pthread_key_delete)
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h:139:1: error: ‘pthread_key_delete’ was not declared in this scope; did you mean ‘pthread_key_t’?
139 | __gthrw(pthread_key_delete)
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h:140:1: error: ‘pthread_mutexattr_init’ was not declared in this scope; did you mean ‘pthread_mutexattr_t’?
140 | __gthrw(pthread_mutexattr_init)
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h:140:1: error: ‘pthread_mutexattr_init’ was not declared in this scope; did you mean ‘pthread_mutexattr_t’?
140 | __gthrw(pthread_mutexattr_init)
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h:141:1: error: ‘pthread_mutexattr_settype’ was not declared in this scope; did you mean ‘pthread_mutexattr_t’?
141 | __gthrw(pthread_mutexattr_settype)
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h:141:1: error: ‘pthread_mutexattr_settype’ was not declared in this scope; did you mean ‘pthread_mutexattr_t’?
141 | __gthrw(pthread_mutexattr_settype)
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h:142:1: error: ‘pthread_mutexattr_destroy’ was not declared in this scope; did you mean ‘pthread_mutexattr_t’?
142 | __gthrw(pthread_mutexattr_destroy)
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h:142:1: error: ‘pthread_mutexattr_destroy’ was not declared in this scope; did you mean ‘pthread_mutexattr_t’?
142 | __gthrw(pthread_mutexattr_destroy)
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h:673:19: error: ‘__gthread_t’ was not declared in this scope; did you mean ‘pthread_t’?
673 | __gthread_create (__gthread_t *__threadid, void *(*__func) (void*),
| ^~~~~~~~~~~
| pthread_t
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h:673:32: error: ‘__threadid’ was not declared in this scope
673 | __gthread_create (__gthread_t *__threadid, void *(*__func) (void*),
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h:673:44: error: expected primary-expression before ‘void’
673 | __gthread_create (__gthread_t *__threadid, void *(*__func) (void*),
| ^~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h:674:19: error: expected primary-expression before ‘void’
674 | void *__args)
| ^~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h:674:31: error: expression list treated as compound expression in initializer [-fpermissive]
674 | void *__args)
| ^
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h:680:17: error: ‘__gthread_t’ was not declared in this scope; did you mean ‘pthread_t’?
680 | __gthread_join (__gthread_t __threadid, void **__value_ptr)
| ^~~~~~~~~~~
| pthread_t
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h:680:41: error: expected primary-expression before ‘void’
680 | __gthread_join (__gthread_t __threadid, void **__value_ptr)
| ^~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h:680:59: error: expression list treated as compound expression in initializer [-fpermissive]
680 | __gthread_join (__gthread_t __threadid, void **__value_ptr)
| ^
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h:686:19: error: ‘__gthread_t’ was not declared in this scope; did you mean ‘pthread_t’?
686 | __gthread_detach (__gthread_t __threadid)
| ^~~~~~~~~~~
| pthread_t
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h:692:18: error: ‘__gthread_t’ was not declared in this scope; did you mean ‘pthread_t’?
692 | __gthread_equal (__gthread_t __t1, __gthread_t __t2)
| ^~~~~~~~~~~
| pthread_t
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h:692:36: error: ‘__gthread_t’ was not declared in this scope; did you mean ‘pthread_t’?
692 | __gthread_equal (__gthread_t __t1, __gthread_t __t2)
| ^~~~~~~~~~~
| pthread_t
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h:692:52: error: expression list treated as compound expression in initializer [-fpermissive]
692 | __gthread_equal (__gthread_t __t1, __gthread_t __t2)
| ^
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h:697:15: error: ‘__gthread_t’ does not name a type; did you mean ‘pthread_t’?
697 | static inline __gthread_t
| ^~~~~~~~~~~
| pthread_t
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h: In function ‘int __gthread_yield()’:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h:706:32: error: ‘__gthrw_sched_yield’ cannot be used as a function
706 | return __gthrw_(sched_yield) ();
| ^
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h: In function ‘int __gthread_once(__gthread_once_t*, void (*)())’:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h:713:35: error: ‘__gthrw_pthread_once’ cannot be used as a function
713 | return __gthrw_(pthread_once) (__once, __func);
| ^
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h: In function ‘int __gthread_key_create(__gthread_key_t*, void (*)(void*))’:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h:721:39: error: ‘__gthrw_pthread_key_create’ cannot be used as a function
721 | return __gthrw_(pthread_key_create) (__key, __dtor);
| ^
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h: In function ‘int __gthread_key_delete(__gthread_key_t)’:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h:727:39: error: ‘__gthrw_pthread_key_delete’ cannot be used as a function
727 | return __gthrw_(pthread_key_delete) (__key);
| ^
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h: In function ‘void* __gthread_getspecific(__gthread_key_t)’:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h:733:40: error: ‘__gthrw_pthread_getspecific’ cannot be used as a function
733 | return __gthrw_(pthread_getspecific) (__key);
| ^
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h: In function ‘int __gthread_setspecific(__gthread_key_t, const void*)’:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h:739:40: error: ‘__gthrw_pthread_setspecific’ cannot be used as a function
739 | return __gthrw_(pthread_setspecific) (__key, __ptr);
| ^
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h: In function ‘void __gthread_mutex_init_function(__gthread_mutex_t*)’:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h:746:34: error: ‘__gthrw_pthread_mutex_init’ cannot be used as a function
746 | __gthrw_(pthread_mutex_init) (__mutex, NULL);
| ^
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h: In function ‘int __gthread_mutex_destroy(__gthread_mutex_t*)’:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h:753:44: error: ‘__gthrw_pthread_mutex_destroy’ cannot be used as a function
753 | return __gthrw_(pthread_mutex_destroy) (__mutex);
| ^
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h: In function ‘int __gthread_mutex_lock(__gthread_mutex_t*)’:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h:762:41: error: ‘__gthrw_pthread_mutex_lock’ cannot be used as a function
762 | return __gthrw_(pthread_mutex_lock) (__mutex);
| ^
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h: In function ‘int __gthread_mutex_trylock(__gthread_mutex_t*)’:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h:771:44: error: ‘__gthrw_pthread_mutex_trylock’ cannot be used as a function
771 | return __gthrw_(pthread_mutex_trylock) (__mutex);
| ^
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h: In function ‘int __gthread_mutex_timedlock(__gthread_mutex_t*, const __gthread_time_t*)’:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h:782:46: error: ‘__gthrw_pthread_mutex_timedlock’ cannot be used as a function
782 | return __gthrw_(pthread_mutex_timedlock) (__mutex, __abs_timeout);
| ^
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h: In function ‘int __gthread_mutex_unlock(__gthread_mutex_t*)’:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h:792:43: error: ‘__gthrw_pthread_mutex_unlock’ cannot be used as a function
792 | return __gthrw_(pthread_mutex_unlock) (__mutex);
| ^
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h: In function ‘int __gthread_recursive_mutex_init_function(__gthread_recursive_mutex_t*)’:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h:807:46: error: ‘__gthrw_pthread_mutexattr_init’ cannot be used as a function
807 | __r = __gthrw_(pthread_mutexattr_init) (&__attr);
| ^
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h:810:52: error: ‘PTHREAD_MUTEX_RECURSIVE’ was not declared in this scope; did you mean ‘PTHREAD_MUTEX_RECURSIVE_NP’?
810 | PTHREAD_MUTEX_RECURSIVE);
| ^~~~~~~~~~~~~~~~~~~~~~~
| PTHREAD_MUTEX_RECURSIVE_NP
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h:810:75: error: ‘__gthrw_pthread_mutexattr_settype’ cannot be used as a function
810 | PTHREAD_MUTEX_RECURSIVE);
| ^
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h:812:44: error: ‘__gthrw_pthread_mutex_init’ cannot be used as a function
812 | __r = __gthrw_(pthread_mutex_init) (__mutex, &__attr);
| ^
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h:814:51: error: ‘__gthrw_pthread_mutexattr_destroy’ cannot be used as a function
814 | __r = __gthrw_(pthread_mutexattr_destroy) (&__attr);
| ^
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h: In function ‘int __gthread_cond_broadcast(__gthread_cond_t*)’:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h:866:43: error: ‘__gthrw_pthread_cond_broadcast’ cannot be used as a function
866 | return __gthrw_(pthread_cond_broadcast) (__cond);
| ^
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h: In function ‘int __gthread_cond_signal(__gthread_cond_t*)’:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h:872:40: error: ‘__gthrw_pthread_cond_signal’ cannot be used as a function
872 | return __gthrw_(pthread_cond_signal) (__cond);
| ^
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h: In function ‘int __gthread_cond_wait(__gthread_cond_t*, __gthread_mutex_t*)’:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h:878:38: error: ‘__gthrw_pthread_cond_wait’ cannot be used as a function
878 | return __gthrw_(pthread_cond_wait) (__cond, __mutex);
| ^
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h: In function ‘int __gthread_cond_timedwait(__gthread_cond_t*, __gthread_mutex_t*, const __gthread_time_t*)’:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h:885:43: error: ‘__gthrw_pthread_cond_timedwait’ cannot be used as a function
885 | return __gthrw_(pthread_cond_timedwait) (__cond, __mutex, __abs_timeout);
| ^
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h: In function ‘int __gthread_cond_destroy(__gthread_cond_t*)’:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/gthr-default.h:898:41: error: ‘__gthrw_pthread_cond_destroy’ cannot be used as a function
898 | return __gthrw_(pthread_cond_destroy) (__cond);
| ^
In file included from /opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/ext/atomicity.h:38:
/usr/include/sys/single_threaded.h: At global scope:
/usr/include/sys/single_threaded.h:24:1: error: ‘__BEGIN_DECLS’ does not name a type
24 | __BEGIN_DECLS
| ^~~~~~~~~~~~~
/usr/include/sys/single_threaded.h:31:1: error: ‘__END_DECLS’ does not name a type
31 | __END_DECLS
| ^~~~~~~~~~~
In file included from /opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/ios_base.h:41:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/locale_classes.h:400:12: error: ‘__c_locale’ does not name a type; did you mean ‘locale’?
400 | static __c_locale _S_c_locale;
| ^~~~~~~~~~
| locale
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/locale_classes.h:431:24: error: ‘__c_locale’ has not been declared
431 | _S_create_c_locale(__c_locale& __cloc, const char* __s,
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/locale_classes.h:432:24: error: ‘__c_locale’ has not been declared
432 | __c_locale __old = 0);
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/locale_classes.h:434:12: error: ‘__c_locale’ does not name a type; did you mean ‘locale’?
434 | static __c_locale
| ^~~~~~~~~~
| locale
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/locale_classes.h:438:25: error: ‘__c_locale’ has not been declared
438 | _S_destroy_c_locale(__c_locale& __cloc);
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/locale_classes.h:440:12: error: ‘__c_locale’ does not name a type; did you mean ‘locale’?
440 | static __c_locale
| ^~~~~~~~~~
| locale
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/locale_classes.h:445:12: error: ‘__c_locale’ does not name a type; did you mean ‘locale’?
445 | static __c_locale
| ^~~~~~~~~~
| locale
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/locale_classes.h: In member function ‘void std::locale::facet::_M_add_reference() const’:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/locale_classes.h:467:18: error: ‘__atomic_add_dispatch’ is not a member of ‘__gnu_cxx’
467 | { __gnu_cxx::__atomic_add_dispatch(&_M_refcount, 1); }
| ^~~~~~~~~~~~~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/locale_classes.h: In member function ‘void std::locale::facet::_M_remove_reference() const’:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/locale_classes.h:474:22: error: ‘__exchange_and_add_dispatch’ is not a member of ‘__gnu_cxx’
474 | if (__gnu_cxx::__exchange_and_add_dispatch(&_M_refcount, -1) == 1)
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/locale_classes.h: In member function ‘void std::locale::_Impl::_M_add_reference()’:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/locale_classes.h:585:18: error: ‘__atomic_add_dispatch’ is not a member of ‘__gnu_cxx’
585 | { __gnu_cxx::__atomic_add_dispatch(&_M_refcount, 1); }
| ^~~~~~~~~~~~~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/locale_classes.h: In member function ‘void std::locale::_Impl::_M_remove_reference()’:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/locale_classes.h:592:22: error: ‘__exchange_and_add_dispatch’ is not a member of ‘__gnu_cxx’
592 | if (__gnu_cxx::__exchange_and_add_dispatch(&_M_refcount, -1) == 1)
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/locale_classes.h: At global scope:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/locale_classes.h:687:7: error: ‘__c_locale’ does not name a type; did you mean ‘locale’?
687 | __c_locale _M_c_locale_collate;
| ^~~~~~~~~~
| locale
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/locale_classes.h:715:25: error: expected ‘)’ before ‘__cloc’
715 | collate(__c_locale __cloc, size_t __refs = 0)
| ~ ^~~~~~~
| )
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/locale_classes.h: In constructor ‘std::__cxx11::collate<_CharT>::collate(std::size_t)’:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/locale_classes.h:702:24: error: class ‘std::__cxx11::collate<_CharT>’ does not have any field named ‘_M_c_locale_collate’
702 | : facet(__refs), _M_c_locale_collate(_S_get_c_locale())
| ^~~~~~~~~~~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/locale_classes.h:702:44: error: there are no arguments to ‘_S_get_c_locale’ that depend on a template parameter, so a declaration of ‘_S_get_c_locale’ must be available [-fpermissive]
702 | : facet(__refs), _M_c_locale_collate(_S_get_c_locale())
| ^~~~~~~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/locale_classes.h:702:44: note: (if you use ‘-fpermissive’, G++ will accept your code, but allowing the use of an undeclared name is deprecated)
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/locale_classes.h: In destructor ‘virtual std::__cxx11::collate<_CharT>::~collate()’:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/locale_classes.h:779:29: error: ‘_M_c_locale_collate’ was not declared in this scope
779 | { _S_destroy_c_locale(_M_c_locale_collate); }
| ^~~~~~~~~~~~~~~~~~~
In file included from /opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/exception_ptr.h:36,
from /opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/exception:166,
from /opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/stdexcept:38,
from /opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/system_error:43,
from /opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/ios_base.h:46:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/cxxabi_init_exception.h: At global scope:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/cxxabi_init_exception.h:63:32: error: ‘size_t’ was not declared in this scope; did you mean ‘std::size_t’?
63 | __cxa_allocate_exception(size_t) _GLIBCXX_NOTHROW;
| ^~~~~~
| std::size_t
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/c++config.h:310:33: note: ‘std::size_t’ declared here
310 | typedef __SIZE_TYPE__ size_t;
| ^~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/exception_ptr.h: In function ‘std::__exception_ptr::exception_ptr std::make_exception_ptr(_Ex)’:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/exception_ptr.h:253:55: error: ‘__cxxabiv1::__cxa_allocate_exception’ cannot be used as a function
253 | void* __e = __cxxabiv1::__cxa_allocate_exception(sizeof(_Ex));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/ios_base.h: In member function ‘void std::ios_base::_Callback_list::_M_add_reference()’:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/ios_base.h:599:39: error: ‘__atomic_add_dispatch’ is not a member of ‘__gnu_cxx’
599 | _M_add_reference() { __gnu_cxx::__atomic_add_dispatch(&_M_refcount, 1); }
| ^~~~~~~~~~~~~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/ios_base.h: In member function ‘int std::ios_base::_Callback_list::_M_remove_reference()’:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/ios_base.h:607:32: error: ‘__exchange_and_add_dispatch’ is not a member of ‘__gnu_cxx’
607 | int __res = __gnu_cxx::__exchange_and_add_dispatch(&_M_refcount, -1);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/wctype.h:38,
from /opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cwctype:50,
from /opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/locale_facets.h:39,
from /opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/basic_ios.h:37,
from /opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/ios:46,
from /opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/ostream:40,
from /opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/iostream:41,
from /home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/RcppCommon.h:53:
/usr/include/bits/wctype-wchar.h: At global scope:
/usr/include/bits/wctype-wchar.h:87:1: error: ‘__BEGIN_DECLS’ does not name a type
87 | __BEGIN_DECLS
| ^~~~~~~~~~~~~
/usr/include/bits/wctype-wchar.h:101:35: error: expected initializer before ‘__THROW’
101 | extern int iswalpha (wint_t __wc) __THROW;
| ^~~~~~~
/usr/include/bits/wctype-wchar.h:104:35: error: expected initializer before ‘__THROW’
104 | extern int iswcntrl (wint_t __wc) __THROW;
| ^~~~~~~
/usr/include/bits/wctype-wchar.h:108:35: error: expected initializer before ‘__THROW’
108 | extern int iswdigit (wint_t __wc) __THROW;
| ^~~~~~~
/usr/include/bits/wctype-wchar.h:112:35: error: expected initializer before ‘__THROW’
112 | extern int iswgraph (wint_t __wc) __THROW;
| ^~~~~~~
/usr/include/bits/wctype-wchar.h:117:35: error: expected initializer before ‘__THROW’
117 | extern int iswlower (wint_t __wc) __THROW;
| ^~~~~~~
/usr/include/bits/wctype-wchar.h:120:35: error: expected initializer before ‘__THROW’
120 | extern int iswprint (wint_t __wc) __THROW;
| ^~~~~~~
/usr/include/bits/wctype-wchar.h:125:35: error: expected initializer before ‘__THROW’
125 | extern int iswpunct (wint_t __wc) __THROW;
| ^~~~~~~
/usr/include/bits/wctype-wchar.h:130:35: error: expected initializer before ‘__THROW’
130 | extern int iswspace (wint_t __wc) __THROW;
| ^~~~~~~
/usr/include/bits/wctype-wchar.h:135:35: error: expected initializer before ‘__THROW’
135 | extern int iswupper (wint_t __wc) __THROW;
| ^~~~~~~
/usr/include/bits/wctype-wchar.h:140:36: error: expected initializer before ‘__THROW’
140 | extern int iswxdigit (wint_t __wc) __THROW;
| ^~~~~~~
/usr/include/bits/wctype-wchar.h:155:49: error: expected initializer before ‘__THROW’
155 | extern wctype_t wctype (const char *__property) __THROW;
| ^~~~~~~
/usr/include/bits/wctype-wchar.h:159:52: error: expected initializer before ‘__THROW’
159 | extern int iswctype (wint_t __wc, wctype_t __desc) __THROW;
| ^~~~~~~
/usr/include/bits/wctype-wchar.h:166:38: error: expected initializer before ‘__THROW’
166 | extern wint_t towlower (wint_t __wc) __THROW;
| ^~~~~~~
/usr/include/bits/wctype-wchar.h:169:38: error: expected initializer before ‘__THROW’
169 | extern wint_t towupper (wint_t __wc) __THROW;
| ^~~~~~~
/usr/include/bits/wctype-wchar.h:171:1: error: ‘__END_DECLS’ does not name a type
171 | __END_DECLS
| ^~~~~~~~~~~
/usr/include/wctype.h:52:8: error: ‘wctrans_t’ does not name a type
52 | extern wctrans_t wctrans (const char *__property) __THROW;
| ^~~~~~~~~
/usr/include/wctype.h:55:39: error: ‘wctrans_t’ has not been declared
55 | extern wint_t towctrans (wint_t __wc, wctrans_t __desc) __THROW;
| ^~~~~~~~~
/usr/include/wctype.h:55:57: error: expected initializer before ‘__THROW’
55 | extern wint_t towctrans (wint_t __wc, wctrans_t __desc) __THROW;
| ^~~~~~~
/usr/include/wctype.h:146:1: error: ‘__END_DECLS’ does not name a type
146 | __END_DECLS
| ^~~~~~~~~~~
In file included from /opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/locale_facets.h:41:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/ctype_base.h:49:35: error: ‘_ISupper’ was not declared in this scope; did you mean ‘_ISwupper’?
49 | static const mask upper = _ISupper;
| ^~~~~~~~
| _ISwupper
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/ctype_base.h:50:35: error: ‘_ISlower’ was not declared in this scope; did you mean ‘_ISwlower’?
50 | static const mask lower = _ISlower;
| ^~~~~~~~
| _ISwlower
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/ctype_base.h:51:35: error: ‘_ISalpha’ was not declared in this scope; did you mean ‘_ISwalpha’?
51 | static const mask alpha = _ISalpha;
| ^~~~~~~~
| _ISwalpha
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/ctype_base.h:52:35: error: ‘_ISdigit’ was not declared in this scope; did you mean ‘_ISwdigit’?
52 | static const mask digit = _ISdigit;
| ^~~~~~~~
| _ISwdigit
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/ctype_base.h:53:35: error: ‘_ISxdigit’ was not declared in this scope; did you mean ‘_ISwxdigit’?
53 | static const mask xdigit = _ISxdigit;
| ^~~~~~~~~
| _ISwxdigit
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/ctype_base.h:54:35: error: ‘_ISspace’ was not declared in this scope; did you mean ‘_ISwspace’?
54 | static const mask space = _ISspace;
| ^~~~~~~~
| _ISwspace
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/ctype_base.h:55:35: error: ‘_ISprint’ was not declared in this scope; did you mean ‘_ISwprint’?
55 | static const mask print = _ISprint;
| ^~~~~~~~
| _ISwprint
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/ctype_base.h:56:35: error: ‘_ISalpha’ was not declared in this scope; did you mean ‘_ISwalpha’?
56 | static const mask graph = _ISalpha | _ISdigit | _ISpunct;
| ^~~~~~~~
| _ISwalpha
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/ctype_base.h:56:46: error: ‘_ISdigit’ was not declared in this scope; did you mean ‘_ISwdigit’?
56 | static const mask graph = _ISalpha | _ISdigit | _ISpunct;
| ^~~~~~~~
| _ISwdigit
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/ctype_base.h:56:57: error: ‘_ISpunct’ was not declared in this scope; did you mean ‘_ISwpunct’?
56 | static const mask graph = _ISalpha | _ISdigit | _ISpunct;
| ^~~~~~~~
| _ISwpunct
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/ctype_base.h:57:35: error: ‘_IScntrl’ was not declared in this scope; did you mean ‘_ISwcntrl’?
57 | static const mask cntrl = _IScntrl;
| ^~~~~~~~
| _ISwcntrl
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/ctype_base.h:58:35: error: ‘_ISpunct’ was not declared in this scope; did you mean ‘_ISwpunct’?
58 | static const mask punct = _ISpunct;
| ^~~~~~~~
| _ISwpunct
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/ctype_base.h:59:35: error: ‘_ISalpha’ was not declared in this scope; did you mean ‘_ISwalpha’?
59 | static const mask alnum = _ISalpha | _ISdigit;
| ^~~~~~~~
| _ISwalpha
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/ctype_base.h:59:46: error: ‘_ISdigit’ was not declared in this scope; did you mean ‘_ISwdigit’?
59 | static const mask alnum = _ISalpha | _ISdigit;
| ^~~~~~~~
| _ISwdigit
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/ctype_base.h:61:35: error: ‘_ISblank’ was not declared in this scope; did you mean ‘_ISwblank’?
61 | static const mask blank = _ISblank;
| ^~~~~~~~
| _ISwblank
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/locale_facets.h:77:26: error: ‘__c_locale’ does not name a type; did you mean ‘locale’?
77 | const __c_locale&) throw();
| ^~~~~~~~~~
| locale
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/locale_facets.h:83:26: error: ‘__c_locale’ does not name a type; did you mean ‘locale’?
83 | const __c_locale&) throw();
| ^~~~~~~~~~
| locale
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/locale_facets.h:88:26: error: ‘__c_locale’ does not name a type; did you mean ‘locale’?
88 | const __c_locale&) throw();
| ^~~~~~~~~~
| locale
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/locale_facets.h:93:26: error: ‘__c_locale’ does not name a type; did you mean ‘locale’?
93 | const __c_locale&) throw();
| ^~~~~~~~~~
| locale
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/locale_facets.h:698:7: error: ‘__c_locale’ does not name a type; did you mean ‘locale’?
698 | __c_locale _M_c_locale_ctype;
| ^~~~~~~~~~
| locale
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/locale_facets.h:739:23: error: expected ‘)’ before ‘__cloc’
739 | ctype(__c_locale __cloc, const mask* __table = 0, bool __del = false,
| ~ ^~~~~~~
| )
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/locale_facets.h:1203:7: error: ‘__c_locale’ does not name a type; did you mean ‘locale’?
1203 | __c_locale _M_c_locale_ctype;
| ^~~~~~~~~~
| locale
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/locale_facets.h:1238:23: error: expected ‘)’ before ‘__cloc’
1238 | ctype(__c_locale __cloc, size_t __refs = 0);
| ~ ^~~~~~~
| )
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/locale_facets.h:1730:26: error: expected ‘)’ before ‘__cloc’
1730 | numpunct(__c_locale __cloc, size_t __refs = 0)
| ~ ^~~~~~~
| )
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/locale_facets.h:1887:30: error: ‘__c_locale’ has not been declared
1887 | _M_initialize_numpunct(__c_locale __cloc = 0);
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/locale_facets.h:1898:5: error: variable or field ‘_M_initialize_numpunct’ declared void
1898 | numpunct<char>::_M_initialize_numpunct(__c_locale __cloc);
| ^~~~~~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/locale_facets.h:1898:44: error: ‘__c_locale’ was not declared in this scope; did you mean ‘locale’?
1898 | numpunct<char>::_M_initialize_numpunct(__c_locale __cloc);
| ^~~~~~~~~~
| locale
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/locale_facets.h:1906:5: error: variable or field ‘_M_initialize_numpunct’ declared void
1906 | numpunct<wchar_t>::_M_initialize_numpunct(__c_locale __cloc);
| ^~~~~~~~~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/locale_facets.h:1906:47: error: ‘__c_locale’ was not declared in this scope; did you mean ‘locale’?
1906 | numpunct<wchar_t>::_M_initialize_numpunct(__c_locale __cloc);
| ^~~~~~~~~~
| locale
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/locale_facets.h: In constructor ‘std::__cxx11::numpunct_byname<_CharT>::numpunct_byname(const char*, std::size_t)’:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/locale_facets.h:1924:13: error: ‘__c_locale’ was not declared in this scope; did you mean ‘locale’?
1924 | __c_locale __tmp;
| ^~~~~~~~~~
| locale
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/locale_facets.h:1925:38: error: ‘__tmp’ was not declared in this scope
1925 | this->_S_create_c_locale(__tmp, __s);
| ^~~~~
In file included from /opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/locale_facets.h:2687:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/locale_facets.tcc: In member function ‘virtual _InIter std::num_get<_CharT, _InIter>::do_get(iter_type, iter_type, std::ios_base&, std::ios_base::iostate&, float&) const’:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/locale_facets.tcc:697:55: error: there are no arguments to ‘_S_get_c_locale’ that depend on a template parameter, so a declaration of ‘_S_get_c_locale’ must be available [-fpermissive]
697 | std::__convert_to_v(__xtrc.c_str(), __v, __err, _S_get_c_locale());
| ^~~~~~~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/locale_facets.tcc: In member function ‘virtual _InIter std::num_get<_CharT, _InIter>::do_get(iter_type, iter_type, std::ios_base&, std::ios_base::iostate&, double&) const’:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/locale_facets.tcc:712:55: error: there are no arguments to ‘_S_get_c_locale’ that depend on a template parameter, so a declaration of ‘_S_get_c_locale’ must be available [-fpermissive]
712 | std::__convert_to_v(__xtrc.c_str(), __v, __err, _S_get_c_locale());
| ^~~~~~~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/locale_facets.tcc: In member function ‘virtual _InIter std::num_get<_CharT, _InIter>::do_get(iter_type, iter_type, std::ios_base&, std::ios_base::iostate&, long double&) const’:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/locale_facets.tcc:744:55: error: there are no arguments to ‘_S_get_c_locale’ that depend on a template parameter, so a declaration of ‘_S_get_c_locale’ must be available [-fpermissive]
744 | std::__convert_to_v(__xtrc.c_str(), __v, __err, _S_get_c_locale());
| ^~~~~~~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/locale_facets.tcc: In member function ‘_OutIter std::num_put<_CharT, _OutIter>::_M_insert_float(_OutIter, std::ios_base&, _CharT, char, _ValueT) const’:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/locale_facets.tcc:1023:41: error: there are no arguments to ‘_S_get_c_locale’ that depend on a template parameter, so a declaration of ‘_S_get_c_locale’ must be available [-fpermissive]
1023 | __len = std::__convert_from_v(_S_get_c_locale(), __cs, __cs_size,
| ^~~~~~~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/locale_facets.tcc:1026:41: error: there are no arguments to ‘_S_get_c_locale’ that depend on a template parameter, so a declaration of ‘_S_get_c_locale’ must be available [-fpermissive]
1026 | __len = std::__convert_from_v(_S_get_c_locale(), __cs, __cs_size,
| ^~~~~~~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/locale_facets.tcc:1035:45: error: there are no arguments to ‘_S_get_c_locale’ that depend on a template parameter, so a declaration of ‘_S_get_c_locale’ must be available [-fpermissive]
1035 | __len = std::__convert_from_v(_S_get_c_locale(), __cs, __cs_size,
| ^~~~~~~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/locale_facets.tcc:1038:45: error: there are no arguments to ‘_S_get_c_locale’ that depend on a template parameter, so a declaration of ‘_S_get_c_locale’ must be available [-fpermissive]
1038 | __len = std::__convert_from_v(_S_get_c_locale(), __cs, __cs_size,
| ^~~~~~~~~~~~~~~
In file included from /opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/locale_facets_nonio.h:39,
from /opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/locale:43,
from /opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/iomanip:48,
from /home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/RcppCommon.h:54:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/ctime: At global scope:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/ctime:64:11: error: ‘clock’ has not been declared in ‘::’
64 | using ::clock;
| ^~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/ctime:65:11: error: ‘difftime’ has not been declared in ‘::’
65 | using ::difftime;
| ^~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/ctime:66:11: error: ‘mktime’ has not been declared in ‘::’
66 | using ::mktime;
| ^~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/ctime:67:11: error: ‘time’ has not been declared in ‘::’
67 | using ::time;
| ^~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/ctime:68:11: error: ‘asctime’ has not been declared in ‘::’
68 | using ::asctime;
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/ctime:69:11: error: ‘ctime’ has not been declared in ‘::’
69 | using ::ctime;
| ^~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/ctime:70:11: error: ‘gmtime’ has not been declared in ‘::’
70 | using ::gmtime;
| ^~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/ctime:71:11: error: ‘localtime’ has not been declared in ‘::’
71 | using ::localtime;
| ^~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/ctime:72:11: error: ‘strftime’ has not been declared in ‘::’
72 | using ::strftime;
| ^~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/locale_facets_nonio.h:183:7: error: ‘__c_locale’ does not name a type; did you mean ‘locale’?
183 | __c_locale _M_c_locale_timepunct;
| ^~~~~~~~~~
| locale
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/locale_facets_nonio.h:207:29: error: expected ‘)’ before ‘__cloc’
207 | __timepunct(__c_locale __cloc, const char* __s, size_t __refs = 0);
| ~ ^~~~~~~
| )
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/locale_facets_nonio.h:322:31: error: ‘__c_locale’ has not been declared
322 | _M_initialize_timepunct(__c_locale __cloc = 0);
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/locale_facets_nonio.h:331:5: error: variable or field ‘_M_initialize_timepunct’ declared void
331 | __timepunct<char>::_M_initialize_timepunct(__c_locale __cloc);
| ^~~~~~~~~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/locale_facets_nonio.h:331:48: error: ‘__c_locale’ was not declared in this scope; did you mean ‘locale’?
331 | __timepunct<char>::_M_initialize_timepunct(__c_locale __cloc);
| ^~~~~~~~~~
| locale
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/locale_facets_nonio.h:340:5: error: variable or field ‘_M_initialize_timepunct’ declared void
340 | __timepunct<wchar_t>::_M_initialize_timepunct(__c_locale __cloc);
| ^~~~~~~~~~~~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/locale_facets_nonio.h:340:51: error: ‘__c_locale’ was not declared in this scope; did you mean ‘locale’?
340 | __timepunct<wchar_t>::_M_initialize_timepunct(__c_locale __cloc);
| ^~~~~~~~~~
| locale
In file included from /opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/locale_facets_nonio.h:352:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/time_members.h: In constructor ‘std::__timepunct<_CharT>::__timepunct(std::size_t)’:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/time_members.h:43:34: error: class ‘std::__timepunct<_CharT>’ does not have any field named ‘_M_c_locale_timepunct’
43 | : facet(__refs), _M_data(0), _M_c_locale_timepunct(0),
| ^~~~~~~~~~~~~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/time_members.h: In constructor ‘std::__timepunct<_CharT>::__timepunct(__cache_type*, std::size_t)’:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/time_members.h:49:40: error: class ‘std::__timepunct<_CharT>’ does not have any field named ‘_M_c_locale_timepunct’
49 | : facet(__refs), _M_data(__cache), _M_c_locale_timepunct(0),
| ^~~~~~~~~~~~~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/time_members.h: At global scope:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/time_members.h:54:37: error: expected constructor, destructor, or type conversion before ‘(’ token
54 | __timepunct<_CharT>::__timepunct(__c_locale __cloc, const char* __s,
| ^
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/time_members.h: In destructor ‘virtual std::__timepunct<_CharT>::~__timepunct()’:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/time_members.h:85:27: error: ‘_M_c_locale_timepunct’ was not declared in this scope; did you mean ‘_M_name_timepunct’?
85 | _S_destroy_c_locale(_M_c_locale_timepunct);
| ^~~~~~~~~~~~~~~~~~~~~
| _M_name_timepunct
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/locale_facets_nonio.h: At global scope:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/locale_facets_nonio.h:1119:28: error: expected ‘)’ before ‘__cloc’
1119 | moneypunct(__c_locale __cloc, const char* __s, size_t __refs = 0)
| ~ ^~~~~~~
| )
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/locale_facets_nonio.h:1408:33: error: ‘__c_locale’ has not been declared
1408 | _M_initialize_moneypunct(__c_locale __cloc = 0,
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/locale_facets_nonio.h:1426:5: error: variable or field ‘_M_initialize_moneypunct’ declared void
1426 | moneypunct<char, true>::_M_initialize_moneypunct(__c_locale, const char*);
| ^~~~~~~~~~~~~~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/locale_facets_nonio.h:1426:54: error: ‘__c_locale’ was not declared in this scope; did you mean ‘locale’?
1426 | moneypunct<char, true>::_M_initialize_moneypunct(__c_locale, const char*);
| ^~~~~~~~~~
| locale
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/locale_facets_nonio.h:1426:66: error: expected primary-expression before ‘const’
1426 | moneypunct<char, true>::_M_initialize_moneypunct(__c_locale, const char*);
| ^~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/locale_facets_nonio.h:1430:5: error: variable or field ‘_M_initialize_moneypunct’ declared void
1430 | moneypunct<char, false>::_M_initialize_moneypunct(__c_locale, const char*);
| ^~~~~~~~~~~~~~~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/locale_facets_nonio.h:1430:55: error: ‘__c_locale’ was not declared in this scope; did you mean ‘locale’?
1430 | moneypunct<char, false>::_M_initialize_moneypunct(__c_locale, const char*);
| ^~~~~~~~~~
| locale
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/locale_facets_nonio.h:1430:67: error: expected primary-expression before ‘const’
1430 | moneypunct<char, false>::_M_initialize_moneypunct(__c_locale, const char*);
| ^~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/locale_facets_nonio.h:1441:5: error: variable or field ‘_M_initialize_moneypunct’ declared void
1441 | moneypunct<wchar_t, true>::_M_initialize_moneypunct(__c_locale,
| ^~~~~~~~~~~~~~~~~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/locale_facets_nonio.h:1441:57: error: ‘__c_locale’ was not declared in this scope; did you mean ‘locale’?
1441 | moneypunct<wchar_t, true>::_M_initialize_moneypunct(__c_locale,
| ^~~~~~~~~~
| locale
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/locale_facets_nonio.h:1442:57: error: expected primary-expression before ‘const’
1442 | const char*);
| ^~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/locale_facets_nonio.h:1446:5: error: variable or field ‘_M_initialize_moneypunct’ declared void
1446 | moneypunct<wchar_t, false>::_M_initialize_moneypunct(__c_locale,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/locale_facets_nonio.h:1446:58: error: ‘__c_locale’ was not declared in this scope; did you mean ‘locale’?
1446 | moneypunct<wchar_t, false>::_M_initialize_moneypunct(__c_locale,
| ^~~~~~~~~~
| locale
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/locale_facets_nonio.h:1447:58: error: expected primary-expression before ‘const’
1447 | const char*);
| ^~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/locale_facets_nonio.h: In constructor ‘std::__cxx11::moneypunct_byname<_CharT, _Intl>::moneypunct_byname(const char*, std::size_t)’:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/locale_facets_nonio.h:1467:13: error: ‘__c_locale’ was not declared in this scope; did you mean ‘locale’?
1467 | __c_locale __tmp;
| ^~~~~~~~~~
| locale
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/locale_facets_nonio.h:1468:38: error: ‘__tmp’ was not declared in this scope
1468 | this->_S_create_c_locale(__tmp, __s);
| ^~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/locale_facets_nonio.h: At global scope:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/locale_facets_nonio.h:1866:7: error: ‘__c_locale’ does not name a type; did you mean ‘locale’?
1866 | __c_locale _M_c_locale_messages;
| ^~~~~~~~~~
| locale
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/locale_facets_nonio.h:1895:26: error: expected ‘)’ before ‘__cloc’
1895 | messages(__c_locale __cloc, const char* __s, size_t __refs = 0);
| ~ ^~~~~~~
| )
In file included from /opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/messages_members.h:36,
from /opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/locale_facets_nonio.h:2064:
/usr/include/libintl.h:34:1: error: ‘__BEGIN_DECLS’ does not name a type
34 | __BEGIN_DECLS
| ^~~~~~~~~~~~~
/usr/include/libintl.h:45:6: error: expected initializer before ‘__THROW’
45 | __THROW __attribute_format_arg__ (2);
| ^~~~~~~
/usr/include/libintl.h:47:6: error: expected initializer before ‘__THROW’
47 | __THROW __attribute_format_arg__ (2);
| ^~~~~~~
/usr/include/libintl.h:53:6: error: expected initializer before ‘__THROW’
53 | __THROW __attribute_format_arg__ (2);
| ^~~~~~~
/usr/include/libintl.h:56:6: error: expected initializer before ‘__THROW’
56 | __THROW __attribute_format_arg__ (2);
| ^~~~~~~
/usr/include/libintl.h:63:6: error: expected initializer before ‘__THROW’
63 | __THROW __attribute_format_arg__ (1) __attribute_format_arg__ (2);
| ^~~~~~~
/usr/include/libintl.h:69:6: error: expected initializer before ‘__THROW’
69 | __THROW __attribute_format_arg__ (2) __attribute_format_arg__ (3);
| ^~~~~~~
/usr/include/libintl.h:76:6: error: expected initializer before ‘__THROW’
76 | __THROW __attribute_format_arg__ (2) __attribute_format_arg__ (3);
| ^~~~~~~
/usr/include/libintl.h:82:52: error: expected initializer before ‘__THROW’
82 | extern char *textdomain (const char *__domainname) __THROW;
| ^~~~~~~
/usr/include/libintl.h:87:53: error: expected initializer before ‘__THROW’
87 | const char *__dirname) __THROW;
| ^~~~~~~
/usr/include/libintl.h:92:62: error: expected initializer before ‘__THROW’
92 | const char *__codeset) __THROW;
| ^~~~~~~
/usr/include/libintl.h:121:1: error: ‘__END_DECLS’ does not name a type
121 | __END_DECLS
| ^~~~~~~~~~~
In file included from /opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/locale_facets_nonio.h:2067:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/codecvt.h:288:7: error: ‘__c_locale’ does not name a type; did you mean ‘locale’?
288 | __c_locale _M_c_locale_codecvt;
| ^~~~~~~~~~
| locale
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/codecvt.h:300:25: error: expected ‘)’ before ‘__cloc’
300 | codecvt(__c_locale __cloc, size_t __refs = 0);
| ~ ^~~~~~~
| )
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/codecvt.h: In constructor ‘std::codecvt<_InternT, _ExternT, _StateT>::codecvt(std::size_t)’:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/codecvt.h:296:9: error: class ‘std::codecvt<_InternT, _ExternT, _StateT>’ does not have any field named ‘_M_c_locale_codecvt’
296 | _M_c_locale_codecvt(0)
| ^~~~~~~~~~~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/codecvt.h: At global scope:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/codecvt.h:353:7: error: ‘__c_locale’ does not name a type; did you mean ‘locale’?
353 | __c_locale _M_c_locale_codecvt;
| ^~~~~~~~~~
| locale
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/codecvt.h:362:25: error: expected ‘)’ before ‘__cloc’
362 | codecvt(__c_locale __cloc, size_t __refs = 0);
| ~ ^~~~~~~
| )
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/codecvt.h:416:7: error: ‘__c_locale’ does not name a type; did you mean ‘locale’?
416 | __c_locale _M_c_locale_codecvt;
| ^~~~~~~~~~
| locale
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/codecvt.h:425:25: error: expected ‘)’ before ‘__cloc’
425 | codecvt(__c_locale __cloc, size_t __refs = 0);
| ~ ^~~~~~~
| )
In file included from /opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/locale_facets_nonio.h:2069:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/locale_facets_nonio.tcc: In member function ‘virtual _InIter std::__cxx11::money_get<_CharT, _InIter>::do_get(iter_type, iter_type, bool, std::ios_base&, std::ios_base::iostate&, long double&) const’:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/locale_facets_nonio.tcc:377:58: error: there are no arguments to ‘_S_get_c_locale’ that depend on a template parameter, so a declaration of ‘_S_get_c_locale’ must be available [-fpermissive]
377 | std::__convert_to_v(__str.c_str(), __units, __err, _S_get_c_locale());
| ^~~~~~~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/locale_facets_nonio.tcc: In member function ‘virtual _OutIter std::__cxx11::money_put<_CharT, _OutIter>::do_put(iter_type, bool, std::ios_base&, char_type, long double) const’:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/locale_facets_nonio.tcc:604:41: error: there are no arguments to ‘_S_get_c_locale’ that depend on a template parameter, so a declaration of ‘_S_get_c_locale’ must be available [-fpermissive]
604 | int __len = std::__convert_from_v(_S_get_c_locale(), __cs, __cs_size,
| ^~~~~~~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/locale_facets_nonio.tcc:611:41: error: there are no arguments to ‘_S_get_c_locale’ that depend on a template parameter, so a declaration of ‘_S_get_c_locale’ must be available [-fpermissive]
611 | __len = std::__convert_from_v(_S_get_c_locale(), __cs, __cs_size,
| ^~~~~~~~~~~~~~~
In file included from /opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/algorithm:61,
from /home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/RcppCommon.h:68:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/stl_algo.h: In function ‘void std::random_shuffle(_RAIter, _RAIter)’:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/stl_algo.h:4503:48: error: ‘rand’ is not a member of ‘std’; did you mean ‘rank’?
4503 | + std::rand() % ((__i - __first) + 1);
| ^~~~
| rank
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/utils/tinyformat/tinyformat.h: In function ‘void tinyformat::detail::formatImpl(std::ostream&, const char*, const FormatArg*, int)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/utils/tinyformat/tinyformat.h:824:17: error: ‘size_t’ was not declared in this scope; did you mean ‘std::size_t’?
824 | for(size_t i = 0, iend = result.size(); i < iend; ++i)
| ^~~~~~
| std::size_t
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/c++config.h:310:33: note: ‘std::size_t’ declared here
310 | typedef __SIZE_TYPE__ size_t;
| ^~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/utils/tinyformat/tinyformat.h:824:53: error: ‘i’ was not declared in this scope
824 | for(size_t i = 0, iend = result.size(); i < iend; ++i)
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/utils/tinyformat/tinyformat.h:824:57: error: ‘iend’ was not declared in this scope
824 | for(size_t i = 0, iend = result.size(); i < iend; ++i)
| ^~~~
In file included from /opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/csetjmp:42,
from /home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/unwindProtect.h:25,
from /home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/RcppCommon.h:137:
/usr/include/setjmp.h: At global scope:
/usr/include/setjmp.h:27:1: error: ‘__BEGIN_DECLS’ does not name a type
27 | __BEGIN_DECLS
| ^~~~~~~~~~~~~
/usr/include/setjmp.h:36:20: error: ‘jmp_buf’ was not declared in this scope
36 | extern int setjmp (jmp_buf __env) __THROWNL;
| ^~~~~~~
/usr/include/setjmp.h:41:72: error: expected initializer before ‘__THROWNL’
41 | extern int __sigsetjmp (struct __jmp_buf_tag __env[1], int __savemask) __THROWNL;
| ^~~~~~~~~
/usr/include/setjmp.h:45:52: error: expected initializer before ‘__THROWNL’
45 | extern int _setjmp (struct __jmp_buf_tag __env[1]) __THROWNL;
| ^~~~~~~~~
/usr/include/setjmp.h:55:6: error: expected initializer before ‘__THROWNL’
55 | __THROWNL __attribute__ ((__noreturn__));
| ^~~~~~~~~
/usr/include/setjmp.h:90:1: error: ‘__END_DECLS’ does not name a type
90 | __END_DECLS
| ^~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/unwindProtect.h:31:10: error: ‘jmp_buf’ in namespace ‘std’ does not name a type
31 | std::jmp_buf jmpbuf;
| ^~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/unwindProtect.h: In function ‘void Rcpp::internal::maybeJump(void*, Rboolean)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/unwindProtect.h:40:23: error: ‘struct Rcpp::internal::UnwindData’ has no member named ‘jmpbuf’
40 | longjmp(data->jmpbuf, 1);
| ^~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/unwindProtect.h:40:9: error: ‘longjmp’ was not declared in this scope; did you mean ‘long’?
40 | longjmp(data->jmpbuf, 1);
| ^~~~~~~
| long
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/unwindProtect.h: In function ‘SEXPREC* Rcpp::unwindProtect(SEXPREC* (*)(void*), void*)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/unwindProtect.h:58:28: error: ‘struct Rcpp::internal::UnwindData’ has no member named ‘jmpbuf’
58 | if (setjmp(unwind_data.jmpbuf)) {
| ^~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/unwindProtect.h:58:9: error: ‘_setjmp’ was not declared in this scope; did you mean ‘setjmp’?
58 | if (setjmp(unwind_data.jmpbuf)) {
| ^~~~~~
In file included from /home/biocbuild/R/R-4.5.0/include/R_ext/GraphicsEngine.h:236,
from /home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/Interrupt.h:25,
from /home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/RcppCommon.h:146:
/home/biocbuild/R/R-4.5.0/include/R_ext/GraphicsDevice.h: At global scope:
/home/biocbuild/R/R-4.5.0/include/R_ext/GraphicsDevice.h:984:57: error: ‘size_t’ has not been declared
984 | extern void *AdobeSymbol2utf8(char*out, const char *in, size_t nwork,
| ^~~~~~
/home/biocbuild/R/R-4.5.0/include/R_ext/GraphicsDevice.h:990:8: error: ‘size_t’ does not name a type
990 | extern size_t Rf_ucstoutf8(char *s, const unsigned int c);
| ^~~~~~
/home/biocbuild/R/R-4.5.0/include/R_ext/GraphicsDevice.h:48:1: note: ‘size_t’ is defined in header ‘<cstddef>’; this is probably fixable by adding ‘#include <cstddef>’
47 | #include <R_ext/libextern.h>
+++ |+#include <cstddef>
48 | #include <R_ext/Boolean.h>
In file included from /home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/RcppCommon.h:159:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/internal/NAComparator.h: In function ‘int Rcpp::internal::StrCmp(SEXP, SEXP)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/internal/NAComparator.h:34:12: error: ‘strcmp’ was not declared in this scope
34 | return strcmp(char_nocheck(x), char_nocheck(y));
| ^~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/internal/NAComparator.h:1:1: note: ‘strcmp’ is defined in header ‘<cstring>’; this is probably fixable by adding ‘#include <cstring>’
+++ |+#include <cstring>
1 | // -*- mode: C++; c-indent-level: 4; c-basic-offset: 4; tab-width: 8 -*-
In file included from /home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/RcppCommon.h:160:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/internal/NAEquals.h: In member function ‘bool Rcpp::internal::NAEquals<double>::operator()(double, double) const’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/internal/NAEquals.h:38:16: error: ‘memcmp’ was not declared in this scope
38 | return memcmp(&left, &right, sizeof(double)) == 0;
| ^~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/internal/NAEquals.h:1:1: note: ‘memcmp’ is defined in header ‘<cstring>’; this is probably fixable by adding ‘#include <cstring>’
+++ |+#include <cstring>
1 | // NAEquals.h: Rcpp R/C++ interface class library -- for allowing NA == NA
In file included from /home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/RcppCommon.h:171:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/internal/export.h: In function ‘std::wstring Rcpp::internal::as_string_elt__impl(SEXP, R_xlen_t, Rcpp::traits::true_type)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/internal/export.h:31:50: error: there are no arguments to ‘strlen’ that depend on a template parameter, so a declaration of ‘strlen’ must be available [-fpermissive]
31 | return std::wstring(y, y+strlen(y) ) ;
| ^~~~~~
In file included from /home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/RcppCommon.h:172:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/internal/r_coerce.h: In function ‘int Rcpp::internal::integer_width(int)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/internal/r_coerce.h:206:32: error: ‘::log10’ has not been declared; did you mean ‘std::log10’?
206 | return n < 0 ? ( (int) ( ::log10( -n+0.5) + 2 ) ) : ( (int) ( ::log10( n+0.5) + 1 ) ) ;
| ^~~~~
| std::log10
In file included from /home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/RcppCommon.h:69:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1095:5: note: ‘std::log10’ declared here
1095 | log10(const complex<_Tp>& __z)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/internal/r_coerce.h:206:69: error: ‘::log10’ has not been declared; did you mean ‘std::log10’?
206 | return n < 0 ? ( (int) ( ::log10( -n+0.5) + 2 ) ) : ( (int) ( ::log10( n+0.5) + 1 ) ) ;
| ^~~~~
| std::log10
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1095:5: note: ‘std::log10’ declared here
1095 | log10(const complex<_Tp>& __z)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/internal/r_coerce.h: In function ‘const char* Rcpp::internal::coerce_to_string(typename Rcpp::traits::storage_type<RTYPE>::type) [with int RTYPE = 15; typename Rcpp::traits::storage_type<RTYPE>::type = Rcomplex]’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/internal/r_coerce.h:219:5: error: ‘snprintf’ was not declared in this scope
219 | snprintf(tmp1, 127, "%f", x.r);
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/internal/r_coerce.h:1:1: note: ‘snprintf’ is defined in header ‘<cstdio>’; this is probably fixable by adding ‘#include <cstdio>’
+++ |+#include <cstdio>
1 | // -*- mode: C++; c-indent-level: 4; c-basic-offset: 4; tab-width: 8 -*-
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/internal/r_coerce.h: In function ‘const char* Rcpp::internal::coerce_to_string(typename Rcpp::traits::storage_type<RTYPE>::type) [with int RTYPE = 14; typename Rcpp::traits::storage_type<RTYPE>::type = double]’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/internal/r_coerce.h:241:5: error: ‘snprintf’ was not declared in this scope
241 | snprintf(tmp, 127, "%f", x);
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/internal/r_coerce.h:241:5: note: ‘snprintf’ is defined in header ‘<cstdio>’; this is probably fixable by adding ‘#include <cstdio>’
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/internal/r_coerce.h:242:9: error: ‘strcmp’ was not declared in this scope
242 | if (strcmp( dropTrailing0(tmp, '.'), "-0") == 0) return "0";
| ^~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/internal/r_coerce.h:1:1: note: ‘strcmp’ is defined in header ‘<cstring>’; this is probably fixable by adding ‘#include <cstring>’
+++ |+#include <cstring>
1 | // -*- mode: C++; c-indent-level: 4; c-basic-offset: 4; tab-width: 8 -*-
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/internal/r_coerce.h: In function ‘const char* Rcpp::internal::coerce_to_string(typename Rcpp::traits::storage_type<RTYPE>::type) [with int RTYPE = 13; typename Rcpp::traits::storage_type<RTYPE>::type = int]’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/internal/r_coerce.h:249:5: error: ‘snprintf’ was not declared in this scope
249 | snprintf(buffer, NB, "%*d", integer_width(from), from);
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/internal/r_coerce.h:249:5: note: ‘snprintf’ is defined in header ‘<cstdio>’; this is probably fixable by adding ‘#include <cstdio>’
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/internal/r_coerce.h: In function ‘const char* Rcpp::internal::coerce_to_string(typename Rcpp::traits::storage_type<RTYPE>::type) [with int RTYPE = 24; typename Rcpp::traits::storage_type<RTYPE>::type = unsigned char]’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/internal/r_coerce.h:255:5: error: ‘snprintf’ was not declared in this scope
255 | snprintf(buff, 3, "%02x", from);
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/internal/r_coerce.h:255:5: note: ‘snprintf’ is defined in header ‘<cstdio>’; this is probably fixable by adding ‘#include <cstdio>’
In file included from /home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/RcppCommon.h:173:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/as.h: In function ‘T Rcpp::internal::as_string(SEXP, Rcpp::traits::true_type)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/as.h:63:38: error: there are no arguments to ‘strlen’ that depend on a template parameter, so a declaration of ‘strlen’ must be available [-fpermissive]
63 | return std::wstring(y, y+strlen(y));
| ^~~~~~
In file included from /home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/RcppCommon.h:192:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/internal/wrap.h: In function ‘SEXPREC* Rcpp::internal::make_charsexp__impl__wstring(const wchar_t*)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/internal/wrap.h:45:13: error: ‘wcstombs’ was not declared in this scope
45 | wcstombs(buffer, data, MAXELTSIZE);
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/internal/wrap.h: In function ‘SEXPREC* Rcpp::internal::make_charsexp__impl__wstring(wchar_t)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/internal/wrap.h:51:13: error: ‘wcstombs’ was not declared in this scope
51 | wcstombs(buffer, x, MAXELTSIZE);
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/internal/wrap.h: In function ‘SEXPREC* Rcpp::internal::primitive_range_wrap__impl(InputIterator, InputIterator, Rcpp::traits::true_type)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/internal/wrap.h:109:13: error: ‘size_t’ was not declared in this scope; did you mean ‘std::size_t’?
109 | size_t size = std::distance(first, last);
| ^~~~~~
| std::size_t
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/c++config.h:310:33: note: ‘std::size_t’ declared here
310 | typedef __SIZE_TYPE__ size_t;
| ^~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/internal/wrap.h:111:50: error: ‘size’ was not declared in this scope
111 | Shield<SEXP> x(Rf_allocVector(RTYPE, size));
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/internal/wrap.h: In function ‘SEXPREC* Rcpp::internal::primitive_range_wrap__impl__nocast(InputIterator, InputIterator, std::random_access_iterator_tag)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/internal/wrap.h:120:13: error: ‘size_t’ was not declared in this scope; did you mean ‘std::size_t’?
120 | size_t size = std::distance(first, last);
| ^~~~~~
| std::size_t
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/c++config.h:310:33: note: ‘std::size_t’ declared here
310 | typedef __SIZE_TYPE__ size_t;
| ^~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/internal/wrap.h:122:50: error: ‘size’ was not declared in this scope
122 | Shield<SEXP> x(Rf_allocVector(RTYPE, size));
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/internal/wrap.h: In function ‘SEXPREC* Rcpp::internal::primitive_range_wrap__impl__nocast(InputIterator, InputIterator, std::input_iterator_tag)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/internal/wrap.h:155:13: error: ‘size_t’ was not declared in this scope; did you mean ‘std::size_t’?
155 | size_t size = std::distance(first, last);
| ^~~~~~
| std::size_t
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/c++config.h:310:33: note: ‘std::size_t’ declared here
310 | typedef __SIZE_TYPE__ size_t;
| ^~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/internal/wrap.h:157:50: error: ‘size’ was not declared in this scope
157 | Shield<SEXP> x(Rf_allocVector(RTYPE, size));
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/internal/wrap.h: In function ‘SEXPREC* Rcpp::internal::range_wrap_dispatch___generic(InputIterator, InputIterator)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/internal/wrap.h:196:13: error: ‘size_t’ was not declared in this scope; did you mean ‘std::size_t’?
196 | size_t size = std::distance(first, last);
| ^~~~~~
| std::size_t
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/c++config.h:310:33: note: ‘std::size_t’ declared here
310 | typedef __SIZE_TYPE__ size_t;
| ^~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/internal/wrap.h:197:51: error: ‘size’ was not declared in this scope
197 | Shield<SEXP> x(Rf_allocVector(VECSXP, size));
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/internal/wrap.h:198:19: error: expected ‘;’ before ‘i’
198 | size_t i =0;
| ^~
| ;
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/internal/wrap.h:199:19: error: ‘i’ was not declared in this scope
199 | while(i < size) {
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/internal/wrap.h: In function ‘SEXPREC* Rcpp::internal::range_wrap_dispatch___impl(InputIterator, InputIterator, Rcpp::traits::r_type_string_tag)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/internal/wrap.h:243:13: error: ‘size_t’ was not declared in this scope; did you mean ‘std::size_t’?
243 | size_t size = std::distance(first, last);
| ^~~~~~
| std::size_t
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/c++config.h:310:33: note: ‘std::size_t’ declared here
310 | typedef __SIZE_TYPE__ size_t;
| ^~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/internal/wrap.h:244:51: error: ‘size’ was not declared in this scope
244 | Shield<SEXP> x(Rf_allocVector(STRSXP, size));
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/internal/wrap.h:245:19: error: expected ‘;’ before ‘i’
245 | size_t i = 0;
| ^~
| ;
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/internal/wrap.h:246:19: error: ‘i’ was not declared in this scope
246 | while(i < size) {
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/internal/wrap.h: In function ‘SEXPREC* Rcpp::internal::range_wrap_dispatch___impl__cast(InputIterator, InputIterator, Rcpp::traits::false_type)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/internal/wrap.h:268:13: error: ‘size_t’ was not declared in this scope; did you mean ‘std::size_t’?
268 | size_t size = std::distance(first, last);
| ^~~~~~
| std::size_t
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/c++config.h:310:33: note: ‘std::size_t’ declared here
310 | typedef __SIZE_TYPE__ size_t;
| ^~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/internal/wrap.h:270:50: error: ‘size’ was not declared in this scope
270 | Shield<SEXP> x(Rf_allocVector(RTYPE, size));
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/internal/wrap.h:274:19: error: expected ‘;’ before ‘i’
274 | size_t i =0;
| ^~
| ;
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/internal/wrap.h:276:20: error: ‘i’ was not declared in this scope
276 | for (; i<size; i++, ++first) {
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/internal/wrap.h: In function ‘SEXPREC* Rcpp::internal::range_wrap_dispatch___impl__cast(InputIterator, InputIterator, Rcpp::traits::true_type)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/internal/wrap.h:296:13: error: ‘size_t’ was not declared in this scope; did you mean ‘std::size_t’?
296 | size_t size = std::distance(first, last);
| ^~~~~~
| std::size_t
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/c++config.h:310:33: note: ‘std::size_t’ declared here
310 | typedef __SIZE_TYPE__ size_t;
| ^~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/internal/wrap.h:298:50: error: ‘size’ was not declared in this scope
298 | Shield<SEXP> x(Rf_allocVector(RTYPE, size));
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/internal/wrap.h:302:19: error: expected ‘;’ before ‘i’
302 | size_t i =0;
| ^~
| ;
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/internal/wrap.h:304:20: error: ‘i’ was not declared in this scope
304 | for (; i<size; i++, ++first) {
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/internal/wrap.h: In function ‘SEXPREC* Rcpp::internal::range_wrap_dispatch___impl(InputIterator, InputIterator, Rcpp::traits::r_type_pairstring_generic_tag)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/internal/wrap.h:342:13: error: ‘size_t’ was not declared in this scope; did you mean ‘std::size_t’?
342 | size_t size = std::distance(first, last);
| ^~~~~~
| std::size_t
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/c++config.h:310:33: note: ‘std::size_t’ declared here
310 | typedef __SIZE_TYPE__ size_t;
| ^~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/internal/wrap.h:343:51: error: ‘size’ was not declared in this scope
343 | Shield<SEXP> x(Rf_allocVector(VECSXP, size));
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/internal/wrap.h:345:19: error: expected ‘;’ before ‘i’
345 | size_t i =0;
| ^~
| ;
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/internal/wrap.h:348:19: error: ‘i’ was not declared in this scope
348 | while(i < size) { // #nocov start
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/internal/wrap.h: In function ‘SEXPREC* Rcpp::internal::range_wrap_dispatch___impl(InputIterator, InputIterator, Rcpp::traits::r_type_pairstring_string_tag)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/internal/wrap.h:373:13: error: ‘size_t’ was not declared in this scope; did you mean ‘std::size_t’?
373 | size_t size = std::distance(first, last);
| ^~~~~~
| std::size_t
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/c++config.h:310:33: note: ‘std::size_t’ declared here
310 | typedef __SIZE_TYPE__ size_t;
| ^~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/internal/wrap.h:374:51: error: ‘size’ was not declared in this scope
374 | Shield<SEXP> x(Rf_allocVector(STRSXP, size));
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/internal/wrap.h:376:24: error: expected ‘;’ before ‘i’
376 | for (size_t i = 0; i < size; i++, ++first) {
| ^~
| ;
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/internal/wrap.h:376:32: error: ‘i’ was not declared in this scope
376 | for (size_t i = 0; i < size; i++, ++first) {
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/internal/wrap.h: In function ‘SEXPREC* Rcpp::internal::wrap_dispatch_unknown_iterable__logical(const T&, Rcpp::traits::true_type)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/internal/wrap.h:535:13: error: ‘size_t’ was not declared in this scope; did you mean ‘std::size_t’?
535 | size_t size = object.size();
| ^~~~~~
| std::size_t
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/c++config.h:310:33: note: ‘std::size_t’ declared here
310 | typedef __SIZE_TYPE__ size_t;
| ^~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/internal/wrap.h:536:51: error: ‘size’ was not declared in this scope
536 | Shield<SEXP> x(Rf_allocVector(LGLSXP, size));
| ^~~~
In file included from /home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp.h:36:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/Dimension.h: At global scope:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/Dimension.h:42:29: error: ‘size_t’ does not name a type
42 | Dimension(const size_t& n1) : dims(1){
| ^~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/Dimension.h:1:1: note: ‘size_t’ is defined in header ‘<cstddef>’; this is probably fixable by adding ‘#include <cstddef>’
+++ |+#include <cstddef>
1 | // -*- mode: C++; c-indent-level: 4; c-basic-offset: 4; indent-tabs-mode: nil; -*-
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/Dimension.h:45:29: error: ‘size_t’ does not name a type
45 | Dimension(const size_t& n1, const size_t& n2) : dims(2){
| ^~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/Dimension.h:45:29: note: ‘size_t’ is defined in header ‘<cstddef>’; this is probably fixable by adding ‘#include <cstddef>’
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/Dimension.h:45:47: error: ‘size_t’ does not name a type
45 | Dimension(const size_t& n1, const size_t& n2) : dims(2){
| ^~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/Dimension.h:45:47: note: ‘size_t’ is defined in header ‘<cstddef>’; this is probably fixable by adding ‘#include <cstddef>’
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/Dimension.h:49:29: error: ‘size_t’ does not name a type
49 | Dimension(const size_t& n1, const size_t& n2, const size_t& n3) : dims(3){
| ^~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/Dimension.h:49:29: note: ‘size_t’ is defined in header ‘<cstddef>’; this is probably fixable by adding ‘#include <cstddef>’
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/Dimension.h:49:47: error: ‘size_t’ does not name a type
49 | Dimension(const size_t& n1, const size_t& n2, const size_t& n3) : dims(3){
| ^~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/Dimension.h:49:47: note: ‘size_t’ is defined in header ‘<cstddef>’; this is probably fixable by adding ‘#include <cstddef>’
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/Dimension.h:49:65: error: ‘size_t’ does not name a type
49 | Dimension(const size_t& n1, const size_t& n2, const size_t& n3) : dims(3){
| ^~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/Dimension.h:49:65: note: ‘size_t’ is defined in header ‘<cstddef>’; this is probably fixable by adding ‘#include <cstddef>’
In file included from /home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/vector/Vector.h:23,
from /home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/Vector.h:51,
from /home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp.h:41:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/vector/Subsetter.h: In member function ‘void Rcpp::SubsetProxy<RTYPE, StoragePolicy, RHS_RTYPE, RHS_NA, RHS_T>::get_indices(Rcpp::traits::identity<Rcpp::traits::int2type<14> >)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/vector/Subsetter.h:163:13: error: ‘size_t’ was not declared in this scope; did you mean ‘std::size_t’?
163 | for(size_t i = 0 ; i < tmp.size() ; ++i) {
| ^~~~~~
| std::size_t
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/c++config.h:310:33: note: ‘std::size_t’ declared here
310 | typedef __SIZE_TYPE__ size_t;
| ^~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/vector/Subsetter.h:163:28: error: ‘i’ was not declared in this scope; did you mean ‘is’?
163 | for(size_t i = 0 ; i < tmp.size() ; ++i) {
| ^
| is
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/vector/Vector.h: At global scope:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/vector/Vector.h:341:36: error: ‘size_t’ does not name a type
341 | inline Proxy operator()( const size_t& i) {
| ^~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/vector/Vector.h:24:1: note: ‘size_t’ is defined in header ‘<cstddef>’; this is probably fixable by adding ‘#include <cstddef>’
23 | #include <Rcpp/vector/Subsetter.h>
+++ |+#include <cstddef>
24 |
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/vector/Vector.h:344:42: error: ‘size_t’ does not name a type
344 | inline const_Proxy operator()( const size_t& i) const {
| ^~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/vector/Vector.h:344:42: note: ‘size_t’ is defined in header ‘<cstddef>’; this is probably fixable by adding ‘#include <cstddef>’
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/vector/Vector.h:348:28: error: ‘size_t’ does not name a type
348 | inline Proxy at( const size_t& i) {
| ^~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/vector/Vector.h:348:28: note: ‘size_t’ is defined in header ‘<cstddef>’; this is probably fixable by adding ‘#include <cstddef>’
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/vector/Vector.h:351:34: error: ‘size_t’ does not name a type
351 | inline const_Proxy at( const size_t& i) const { // #nocov start
| ^~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/vector/Vector.h:351:34: note: ‘size_t’ is defined in header ‘<cstddef>’; this is probably fixable by adding ‘#include <cstddef>’
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/vector/Vector.h:355:36: error: ‘size_t’ does not name a type
355 | inline Proxy operator()( const size_t& i, const size_t& j) {
| ^~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/vector/Vector.h:355:36: note: ‘size_t’ is defined in header ‘<cstddef>’; this is probably fixable by adding ‘#include <cstddef>’
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/vector/Vector.h:355:53: error: ‘size_t’ does not name a type
355 | inline Proxy operator()( const size_t& i, const size_t& j) {
| ^~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/vector/Vector.h:355:53: note: ‘size_t’ is defined in header ‘<cstddef>’; this is probably fixable by adding ‘#include <cstddef>’
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/vector/Vector.h:358:42: error: ‘size_t’ does not name a type
358 | inline const_Proxy operator()( const size_t& i, const size_t& j) const {
| ^~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/vector/Vector.h:358:42: note: ‘size_t’ is defined in header ‘<cstddef>’; this is probably fixable by adding ‘#include <cstddef>’
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/vector/Vector.h:358:59: error: ‘size_t’ does not name a type
358 | inline const_Proxy operator()( const size_t& i, const size_t& j) const {
| ^~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/vector/Vector.h:358:59: note: ‘size_t’ is defined in header ‘<cstddef>’; this is probably fixable by adding ‘#include <cstddef>’
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/vector/Vector.h: In member function ‘bool Rcpp::Vector<RTYPE, StoragePolicy>::containsElementNamed(const char*) const’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/vector/Vector.h:588:18: error: there are no arguments to ‘strcmp’ that depend on a template parameter, so a declaration of ‘strcmp’ must be available [-fpermissive]
588 | if( !strcmp( target, CHAR(STRING_ELT(names, i)) ) )
| ^~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/vector/Vector.h: In member function ‘R_xlen_t Rcpp::Vector<RTYPE, StoragePolicy>::findName(const std::string&) const’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/vector/Vector.h:599:17: error: there are no arguments to ‘strcmp’ that depend on a template parameter, so a declaration of ‘strcmp’ must be available [-fpermissive]
599 | if (strcmp(name.c_str(), CHAR(STRING_ELT(names, i))) == 0) {
| ^~~~~~
In file included from /home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/Vector.h:57:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/vector/Matrix.h: At global scope:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/vector/Matrix.h:137:36: error: ‘size_t’ does not name a type
137 | inline Proxy operator()( const size_t& i, const size_t& j) {
| ^~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/vector/Matrix.h:1:1: note: ‘size_t’ is defined in header ‘<cstddef>’; this is probably fixable by adding ‘#include <cstddef>’
+++ |+#include <cstddef>
1 | // -*- mode: C++; c-indent-level: 4; c-basic-offset: 4; indent-tabs-mode: nil; -*-
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/vector/Matrix.h:137:53: error: ‘size_t’ does not name a type
137 | inline Proxy operator()( const size_t& i, const size_t& j) {
| ^~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/vector/Matrix.h:137:53: note: ‘size_t’ is defined in header ‘<cstddef>’; this is probably fixable by adding ‘#include <cstddef>’
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/vector/Matrix.h:140:42: error: ‘size_t’ does not name a type
140 | inline const_Proxy operator()( const size_t& i, const size_t& j) const {
| ^~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/vector/Matrix.h:140:42: note: ‘size_t’ is defined in header ‘<cstddef>’; this is probably fixable by adding ‘#include <cstddef>’
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/vector/Matrix.h:140:59: error: ‘size_t’ does not name a type
140 | inline const_Proxy operator()( const size_t& i, const size_t& j) const {
| ^~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/vector/Matrix.h:140:59: note: ‘size_t’ is defined in header ‘<cstddef>’; this is probably fixable by adding ‘#include <cstddef>’
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/vector/Matrix.h:144:28: error: ‘size_t’ does not name a type
144 | inline Proxy at( const size_t& i, const size_t& j) {
| ^~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/vector/Matrix.h:144:28: note: ‘size_t’ is defined in header ‘<cstddef>’; this is probably fixable by adding ‘#include <cstddef>’
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/vector/Matrix.h:144:45: error: ‘size_t’ does not name a type
144 | inline Proxy at( const size_t& i, const size_t& j) {
| ^~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/vector/Matrix.h:144:45: note: ‘size_t’ is defined in header ‘<cstddef>’; this is probably fixable by adding ‘#include <cstddef>’
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/vector/Matrix.h:147:34: error: ‘size_t’ does not name a type
147 | inline const_Proxy at( const size_t& i, const size_t& j) const {
| ^~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/vector/Matrix.h:147:34: note: ‘size_t’ is defined in header ‘<cstddef>’; this is probably fixable by adding ‘#include <cstddef>’
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/vector/Matrix.h:147:51: error: ‘size_t’ does not name a type
147 | inline const_Proxy at( const size_t& i, const size_t& j) const {
| ^~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/vector/Matrix.h:147:51: note: ‘size_t’ is defined in header ‘<cstddef>’; this is probably fixable by adding ‘#include <cstddef>’
In file included from /home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/Vector.h:63:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/vector/string_proxy.h: In function ‘bool Rcpp::internal::operator<(const string_proxy<RT>&, const string_proxy<RT>&)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/vector/string_proxy.h:222:24: error: there are no arguments to ‘strcmp’ that depend on a template parameter, so a declaration of ‘strcmp’ must be available [-fpermissive]
222 | return strcmp(
| ^~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/vector/string_proxy.h: In function ‘bool Rcpp::internal::operator>(const string_proxy<RT>&, const string_proxy<RT>&)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/vector/string_proxy.h:230:24: error: there are no arguments to ‘strcmp’ that depend on a template parameter, so a declaration of ‘strcmp’ must be available [-fpermissive]
230 | return strcmp(
| ^~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/vector/string_proxy.h: In function ‘bool Rcpp::internal::operator>=(const string_proxy<RT>&, const string_proxy<RT>&)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/vector/string_proxy.h:238:24: error: there are no arguments to ‘strcmp’ that depend on a template parameter, so a declaration of ‘strcmp’ must be available [-fpermissive]
238 | return strcmp(
| ^~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/vector/string_proxy.h: In function ‘bool Rcpp::internal::operator<=(const string_proxy<RT>&, const string_proxy<RT>&)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/vector/string_proxy.h:246:24: error: there are no arguments to ‘strcmp’ that depend on a template parameter, so a declaration of ‘strcmp’ must be available [-fpermissive]
246 | return strcmp(
| ^~~~~~
In file included from /home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/Vector.h:64:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/vector/const_string_proxy.h: In function ‘bool Rcpp::internal::operator<(const const_string_proxy<RT>&, const const_string_proxy<RT>&)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/vector/const_string_proxy.h:129:24: error: there are no arguments to ‘strcmp’ that depend on a template parameter, so a declaration of ‘strcmp’ must be available [-fpermissive]
129 | return strcmp(
| ^~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/vector/const_string_proxy.h: In function ‘bool Rcpp::internal::operator>(const const_string_proxy<RT>&, const const_string_proxy<RT>&)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/vector/const_string_proxy.h:137:24: error: there are no arguments to ‘strcmp’ that depend on a template parameter, so a declaration of ‘strcmp’ must be available [-fpermissive]
137 | return strcmp(
| ^~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/vector/const_string_proxy.h: In function ‘bool Rcpp::internal::operator>=(const const_string_proxy<RT>&, const const_string_proxy<RT>&)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/vector/const_string_proxy.h:145:24: error: there are no arguments to ‘strcmp’ that depend on a template parameter, so a declaration of ‘strcmp’ must be available [-fpermissive]
145 | return strcmp(
| ^~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/vector/const_string_proxy.h: In function ‘bool Rcpp::internal::operator<=(const const_string_proxy<RT>&, const const_string_proxy<RT>&)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/vector/const_string_proxy.h:153:24: error: there are no arguments to ‘strcmp’ that depend on a template parameter, so a declaration of ‘strcmp’ must be available [-fpermissive]
153 | return strcmp(
| ^~~~~~
In file included from /home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/Vector.h:68:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/String.h: In member function ‘Rcpp::String& Rcpp::String::append_wide_string(const T&)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/String.h:334:41: error: there are no arguments to ‘strlen’ that depend on a template parameter, so a declaration of ‘strlen’ must be available [-fpermissive]
334 | std::wstring tmp(buf, buf + strlen(buf));
| ^~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/String.h: In member function ‘Rcpp::String& Rcpp::String::replace_first(const char*, const char*)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/String.h:419:13: error: ‘size_t’ was not declared in this scope; did you mean ‘std::size_t’?
419 | size_t index = std::distance(buffer.begin(), std::search(buffer.begin(), buffer.end(), s2.begin(), s2.end()));
| ^~~~~~
| std::size_t
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/c++config.h:310:33: note: ‘std::size_t’ declared here
310 | typedef __SIZE_TYPE__ size_t;
| ^~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/String.h:420:17: error: ‘index’ was not declared in this scope
420 | if (index != std::string::npos) buffer.replace(index, strlen(s), news);
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/String.h:420:67: error: ‘strlen’ was not declared in this scope
420 | if (index != std::string::npos) buffer.replace(index, strlen(s), news);
| ^~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/String.h:1:1: note: ‘strlen’ is defined in header ‘<cstring>’; this is probably fixable by adding ‘#include <cstring>’
+++ |+#include <cstring>
1 |
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/String.h: In member function ‘Rcpp::String& Rcpp::String::replace_last(const char*, const char*)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/String.h:445:13: error: ‘size_t’ was not declared in this scope; did you mean ‘std::size_t’?
445 | size_t index = std::distance(buffer.begin(), std::find_end(buffer.begin(), buffer.end(), s2.begin(), s2.end()));
| ^~~~~~
| std::size_t
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/c++config.h:310:33: note: ‘std::size_t’ declared here
310 | typedef __SIZE_TYPE__ size_t;
| ^~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/String.h:446:17: error: ‘index’ was not declared in this scope
446 | if (index != std::string::npos) buffer.replace(index, strlen(s), news);
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/String.h:446:67: error: ‘strlen’ was not declared in this scope
446 | if (index != std::string::npos) buffer.replace(index, strlen(s), news);
| ^~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/String.h:446:67: note: ‘strlen’ is defined in header ‘<cstring>’; this is probably fixable by adding ‘#include <cstring>’
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/String.h: In member function ‘Rcpp::String& Rcpp::String::replace_all(const char*, const char*)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/String.h:476:17: error: ‘size_t’ was not declared in this scope; did you mean ‘std::size_t’?
476 | size_t index = std::distance(buffer.begin(), iter);
| ^~~~~~
| std::size_t
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/c++config.h:310:33: note: ‘std::size_t’ declared here
310 | typedef __SIZE_TYPE__ size_t;
| ^~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/String.h:477:21: error: ‘index’ was not declared in this scope
477 | if (index != std::string::npos) buffer.replace(index, strlen(s), news);
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/String.h:477:71: error: ‘strlen’ was not declared in this scope
477 | if (index != std::string::npos) buffer.replace(index, strlen(s), news);
| ^~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/String.h:477:71: note: ‘strlen’ is defined in header ‘<cstring>’; this is probably fixable by adding ‘#include <cstring>’
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/String.h: In member function ‘Rcpp::String::operator std::wstring() const’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/String.h:571:40: error: ‘strlen’ was not declared in this scope
571 | return std::wstring(s, s + strlen(s));
| ^~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/String.h:571:40: note: ‘strlen’ is defined in header ‘<cstring>’; this is probably fixable by adding ‘#include <cstring>’
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/String.h: In member function ‘bool Rcpp::String::operator<(const Rcpp::String&) const’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/String.h:599:20: error: ‘strcmp’ was not declared in this scope
599 | return strcmp(get_cstring(), other.get_cstring()) < 0;
| ^~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/String.h:599:20: note: ‘strcmp’ is defined in header ‘<cstring>’; this is probably fixable by adding ‘#include <cstring>’
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/String.h: In member function ‘bool Rcpp::String::operator>(const Rcpp::String&) const’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/String.h:626:20: error: ‘strcmp’ was not declared in this scope
626 | return strcmp(get_cstring(), other.get_cstring()) > 0;
| ^~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/String.h:626:20: note: ‘strcmp’ is defined in header ‘<cstring>’; this is probably fixable by adding ‘#include <cstring>’
In file included from /home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp.h:48:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/DottedPairImpl.h: At global scope:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/DottedPairImpl.h:55:28: error: ‘size_t’ does not name a type
55 | void insert( const size_t& index, const T& object) ;
| ^~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/DottedPairImpl.h:1:1: note: ‘size_t’ is defined in header ‘<cstddef>’; this is probably fixable by adding ‘#include <cstddef>’
+++ |+#include <cstddef>
1 | // Copyright (C) 2013 Romain Francois
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/DottedPairImpl.h:79:28: error: ‘size_t’ does not name a type
79 | void remove( const size_t& index );
| ^~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/DottedPairImpl.h:79:28: note: ‘size_t’ is defined in header ‘<cstddef>’; this is probably fixable by adding ‘#include <cstddef>’
In file included from /home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp.h:58:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/DataFrame.h: In member function ‘int Rcpp::DataFrame_Impl<StoragePolicy>::nrow() const’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/DataFrame.h:82:32: error: no matching function for call to ‘abs(int&)’
82 | return std::abs(INTEGER(rn)[1]);
| ~~~~~~~~^~~~~~~~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:892:5: note: candidate: ‘template<class _Tp> _Tp std::abs(const complex<_Tp>&)’
892 | abs(const complex<_Tp>& __z) { return __complex_abs(__z.__rep()); }
| ^~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:892:5: note: template argument deduction/substitution failed:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/DataFrame.h:82:32: note: mismatched types ‘const std::complex<_Tp>’ and ‘int’
82 | return std::abs(INTEGER(rn)[1]);
| ~~~~~~~~^~~~~~~~~~~~~~~~
In file included from /home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/exceptions_impl.h:39,
from /home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp.h:60:
/usr/include/execinfo.h: At global scope:
/usr/include/execinfo.h:23:1: error: ‘__BEGIN_DECLS’ does not name a type
23 | __BEGIN_DECLS
| ^~~~~~~~~~~~~
/usr/include/execinfo.h:33:6: error: expected initializer before ‘__THROW’
33 | __THROW __nonnull ((1));
| ^~~~~~~
/usr/include/execinfo.h:39:6: error: expected initializer before ‘__THROW’
39 | __THROW __nonnull ((1));
| ^~~~~~~
/usr/include/execinfo.h:41:1: error: ‘__END_DECLS’ does not name a type
41 | __END_DECLS
| ^~~~~~~~~~~
In file included from /home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/date_datetime/date_datetime.h:25,
from /home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp.h:65:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/date_datetime/Date.h: In member function ‘std::string Rcpp::Date::format(const char*) const’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/date_datetime/Date.h:111:13: error: ‘size_t’ was not declared in this scope; did you mean ‘std::size_t’?
111 | size_t res = ::strftime(txt, 31, fmt, &temp);
| ^~~~~~
| std::size_t
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/c++config.h:310:33: note: ‘std::size_t’ declared here
310 | typedef __SIZE_TYPE__ size_t;
| ^~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/date_datetime/Date.h:112:17: error: ‘res’ was not declared in this scope
112 | if (res == 0) {
| ^~~
In file included from /home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/date_datetime/date_datetime.h:27:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/date_datetime/newDateVector.h: In member function ‘std::vector<Rcpp::Date, std::allocator<Rcpp::Date> > Rcpp::newDateVector::getDates() const’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/date_datetime/newDateVector.h:44:13: error: ‘size_t’ was not declared in this scope; did you mean ‘std::size_t’?
44 | size_t n = this->size();
| ^~~~~~
| std::size_t
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/c++config.h:310:33: note: ‘std::size_t’ declared here
310 | typedef __SIZE_TYPE__ size_t;
| ^~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/date_datetime/newDateVector.h:45:33: error: ‘n’ was not declared in this scope
45 | std::vector<Date> v(n);
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/date_datetime/newDateVector.h:46:25: error: expected ‘;’ before ‘i’
46 | for (size_t i=0; i<n; i++)
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/date_datetime/newDateVector.h:46:30: error: ‘i’ was not declared in this scope; did you mean ‘is’?
46 | for (size_t i=0; i<n; i++)
| ^
| is
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/date_datetime/newDateVector.h: In function ‘std::ostream& Rcpp::operator<<(std::ostream&, newDateVector)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/date_datetime/newDateVector.h:70:9: error: ‘size_t’ was not declared in this scope; did you mean ‘std::size_t’?
70 | size_t n = d.size();
| ^~~~~~
| std::size_t
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/c++config.h:310:33: note: ‘std::size_t’ declared here
310 | typedef __SIZE_TYPE__ size_t;
| ^~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/date_datetime/newDateVector.h:71:20: error: expected ‘;’ before ‘i’
71 | for (size_t i=0; i<n; i++) {
| ^~
| ;
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/date_datetime/newDateVector.h:71:26: error: ‘i’ was not declared in this scope
71 | for (size_t i=0; i<n; i++) {
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/date_datetime/newDateVector.h:71:28: error: ‘n’ was not declared in this scope
71 | for (size_t i=0; i<n; i++) {
| ^
In file included from /home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/date_datetime/date_datetime.h:29:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/date_datetime/Datetime.h: In member function ‘std::string Rcpp::Datetime::format(const char*) const’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/date_datetime/Datetime.h:77:54: error: call of overloaded ‘floor(const double&)’ is ambiguous
77 | time_t t = static_cast<time_t>(std::floor(m_dt));
| ~~~~~~~~~~^~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:257:3: note: candidate: ‘constexpr float std::floor(float)’
257 | floor(float __x)
| ^~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:261:3: note: candidate: ‘constexpr long double std::floor(long double)’
261 | floor(long double __x)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/date_datetime/Datetime.h:78:31: error: ‘localtime’ was not declared in this scope
78 | struct tm temp = *localtime(&t); // localtime, not gmtime
| ^~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/date_datetime/Datetime.h:1:1: note: ‘localtime’ is defined in header ‘<ctime>’; this is probably fixable by adding ‘#include <ctime>’
+++ |+#include <ctime>
1 | // -*- mode: C++; c-indent-level: 4; c-basic-offset: 4; indent-tabs-mode: nil; -*-
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/date_datetime/Datetime.h:79:13: error: ‘size_t’ was not declared in this scope; did you mean ‘std::size_t’?
79 | size_t res = ::strftime(txtiso, 63, fmt, &temp);
| ^~~~~~
| std::size_t
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/c++config.h:310:33: note: ‘std::size_t’ declared here
310 | typedef __SIZE_TYPE__ size_t;
| ^~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/date_datetime/Datetime.h:80:17: error: ‘res’ was not declared in this scope
80 | if (res == 0) {
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/date_datetime/Datetime.h:83:25: error: ‘::snprintf’ has not been declared
83 | res = ::snprintf(txtsec, 63, "%s.%06d", txtiso, m_us);
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/date_datetime/Datetime.h:1:1: note: ‘snprintf’ is defined in header ‘<cstdio>’; this is probably fixable by adding ‘#include <cstdio>’
+++ |+#include <cstdio>
1 | // -*- mode: C++; c-indent-level: 4; c-basic-offset: 4; indent-tabs-mode: nil; -*-
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/date_datetime/Datetime.h:78:23: warning: unused variable ‘temp’ [-Wunused-variable]
78 | struct tm temp = *localtime(&t); // localtime, not gmtime
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/date_datetime/Datetime.h: In member function ‘void Rcpp::Datetime::update_tm()’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/date_datetime/Datetime.h:102:39: error: call of overloaded ‘floor(double&)’ is ambiguous
102 | double dt = std::floor(m_dt);
| ~~~~~~~~~~^~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:257:3: note: candidate: ‘constexpr float std::floor(float)’
257 | floor(float __x)
| ^~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:261:3: note: candidate: ‘constexpr long double std::floor(long double)’
261 | floor(long double __x)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/date_datetime/Datetime.h: In function ‘Rcpp::Datetime Rcpp::operator+(const Datetime&, double)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/date_datetime/Datetime.h:141:31: error: call of overloaded ‘floor(double&)’ is ambiguous
141 | double dt = std::floor(newdt.m_dt);
| ~~~~~~~~~~^~~~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:257:3: note: candidate: ‘constexpr float std::floor(float)’
257 | floor(float __x)
| ^~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:261:3: note: candidate: ‘constexpr long double std::floor(long double)’
261 | floor(long double __x)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/date_datetime/Datetime.h: In function ‘Rcpp::Datetime Rcpp::operator+(const Datetime&, int)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/date_datetime/Datetime.h:151:31: error: call of overloaded ‘floor(double&)’ is ambiguous
151 | double dt = std::floor(newdt.m_dt);
| ~~~~~~~~~~^~~~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:257:3: note: candidate: ‘constexpr float std::floor(float)’
257 | floor(float __x)
| ^~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:261:3: note: candidate: ‘constexpr long double std::floor(long double)’
261 | floor(long double __x)
| ^~~~~
In file included from /home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/date_datetime/date_datetime.h:31:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/date_datetime/newDatetimeVector.h: In member function ‘std::vector<Rcpp::Datetime, std::allocator<Rcpp::Datetime> > Rcpp::newDatetimeVector::getDatetimes() const’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/date_datetime/newDatetimeVector.h:52:13: error: ‘size_t’ was not declared in this scope; did you mean ‘std::size_t’?
52 | size_t n = this->size();
| ^~~~~~
| std::size_t
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/c++config.h:310:33: note: ‘std::size_t’ declared here
310 | typedef __SIZE_TYPE__ size_t;
| ^~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/date_datetime/newDatetimeVector.h:53:37: error: ‘n’ was not declared in this scope
53 | std::vector<Datetime> v(n);
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/date_datetime/newDatetimeVector.h:54:25: error: expected ‘;’ before ‘i’
54 | for (size_t i=0; i<n; i++)
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/date_datetime/newDatetimeVector.h:54:30: error: ‘i’ was not declared in this scope; did you mean ‘is’?
54 | for (size_t i=0; i<n; i++)
| ^
| is
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/date_datetime/newDatetimeVector.h: In member function ‘void Rcpp::newDatetimeVector::setClass(const char*)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/date_datetime/newDatetimeVector.h:78:17: error: ‘strcmp’ was not declared in this scope
78 | if (strcmp(tz, "") != 0) {
| ^~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/date_datetime/newDatetimeVector.h:1:1: note: ‘strcmp’ is defined in header ‘<cstring>’; this is probably fixable by adding ‘#include <cstring>’
+++ |+#include <cstring>
1 | // -*- mode: C++; c-indent-level: 4; c-basic-offset: 4; indent-tabs-mode: nil; -*-
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/date_datetime/newDatetimeVector.h: In function ‘std::ostream& Rcpp::operator<<(std::ostream&, newDatetimeVector)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/date_datetime/newDatetimeVector.h:86:9: error: ‘size_t’ was not declared in this scope; did you mean ‘std::size_t’?
86 | size_t n = d.size();
| ^~~~~~
| std::size_t
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/c++config.h:310:33: note: ‘std::size_t’ declared here
310 | typedef __SIZE_TYPE__ size_t;
| ^~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/date_datetime/newDatetimeVector.h:87:20: error: expected ‘;’ before ‘i’
87 | for (size_t i=0; i<n; i++) {
| ^~
| ;
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/date_datetime/newDatetimeVector.h:87:26: error: ‘i’ was not declared in this scope
87 | for (size_t i=0; i<n; i++) {
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/date_datetime/newDatetimeVector.h:87:28: error: ‘n’ was not declared in this scope
87 | for (size_t i=0; i<n; i++) {
| ^
In file included from /home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/Module.h:136,
from /home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp.h:70:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/Module.h: In member function ‘Rcpp::IntegerVector Rcpp::Module::functions_arity()’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/Module.h:73:17: error: ‘size_t’ was not declared in this scope; did you mean ‘std::size_t’?
73 | size_t n = functions.size() ;
| ^~~~~~
| std::size_t
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/c++config.h:310:33: note: ‘std::size_t’ declared here
310 | typedef __SIZE_TYPE__ size_t;
| ^~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/Module.h:74:34: error: ‘n’ was not declared in this scope
74 | IntegerVector x( n ) ;
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/Module.h:77:29: error: expected ‘;’ before ‘i’
77 | for( size_t i=0; i<n; i++, ++it){
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/Module.h:77:34: error: ‘i’ was not declared in this scope; did you mean ‘is’?
77 | for( size_t i=0; i<n; i++, ++it){
| ^
| is
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/Module.h: In member function ‘Rcpp::CharacterVector Rcpp::Module::functions_names()’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/Module.h:89:17: error: ‘size_t’ was not declared in this scope; did you mean ‘std::size_t’?
89 | size_t n = functions.size() ;
| ^~~~~~
| std::size_t
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/c++config.h:310:33: note: ‘std::size_t’ declared here
310 | typedef __SIZE_TYPE__ size_t;
| ^~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/Module.h:90:40: error: ‘n’ was not declared in this scope
90 | CharacterVector names( n );
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/Module.h:92:29: error: expected ‘;’ before ‘i’
92 | for( size_t i=0; i<n; i++, ++it){
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/Module.h:92:34: error: ‘i’ was not declared in this scope; did you mean ‘is’?
92 | for( size_t i=0; i<n; i++, ++it){
| ^
| is
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/Module.h: In member function ‘Rcpp::CharacterVector Rcpp::Module::class_names()’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/Module.h:102:13: error: ‘size_t’ was not declared in this scope; did you mean ‘std::size_t’?
102 | size_t n = classes.size() ;
| ^~~~~~
| std::size_t
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/c++config.h:310:33: note: ‘std::size_t’ declared here
310 | typedef __SIZE_TYPE__ size_t;
| ^~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/Module.h:103:36: error: ‘n’ was not declared in this scope
103 | CharacterVector names( n );
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/Module.h:105:25: error: expected ‘;’ before ‘i’
105 | for( size_t i=0; i<n; i++, ++it){
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/Module.h:105:30: error: ‘i’ was not declared in this scope; did you mean ‘is’?
105 | for( size_t i=0; i<n; i++, ++it){
| ^
| is
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/Module.h: In member function ‘Rcpp::CharacterVector Rcpp::Module::complete()’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/Module.h:120:13: error: ‘size_t’ was not declared in this scope; did you mean ‘std::size_t’?
120 | size_t nf = functions.size() ;
| ^~~~~~
| std::size_t
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/c++config.h:310:33: note: ‘std::size_t’ declared here
310 | typedef __SIZE_TYPE__ size_t;
| ^~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/Module.h:121:20: error: expected ‘;’ before ‘nc’
121 | size_t nc = classes.size() ;
| ^~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/Module.h:122:20: error: expected ‘;’ before ‘n’
122 | size_t n = nf + nc ;
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/Module.h:123:34: error: ‘n’ was not declared in this scope
123 | CharacterVector res( n ) ;
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/Module.h:124:20: error: expected ‘;’ before ‘i’
124 | size_t i=0;
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/Module.h:127:20: error: ‘i’ was not declared in this scope; did you mean ‘is’?
127 | for( ; i<nf; i++, ++it) {
| ^
| is
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/Module.h:127:22: error: ‘nf’ was not declared in this scope
127 | for( ; i<nf; i++, ++it) {
| ^~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/Module.h:137:25: error: expected ‘;’ before ‘j’
137 | for( size_t j=0; j<nc; j++, i++, ++cit){
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/Module.h:137:30: error: ‘j’ was not declared in this scope
137 | for( size_t j=0; j<nc; j++, i++, ++cit){
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/Module.h:137:32: error: ‘nc’ was not declared in this scope
137 | for( size_t j=0; j<nc; j++, i++, ++cit){
| ^~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/Module.h:137:41: error: ‘i’ was not declared in this scope; did you mean ‘is’?
137 | for( size_t j=0; j<nc; j++, i++, ++cit){
| ^
| is
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/Module.h: In member function ‘SEXPREC* Rcpp::Module::get_function(const std::string&)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/Module.h:156:13: error: ‘size_t’ was not declared in this scope; did you mean ‘std::size_t’?
156 | size_t n = functions.size() ;
| ^~~~~~
| std::size_t
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/c++config.h:310:33: note: ‘std::size_t’ declared here
310 | typedef __SIZE_TYPE__ size_t;
| ^~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/Module.h:158:25: error: expected ‘;’ before ‘i’
158 | for( size_t i=0; i<n; i++, ++it){
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/Module.h:158:30: error: ‘i’ was not declared in this scope; did you mean ‘is’?
158 | for( size_t i=0; i<n; i++, ++it){
| ^
| is
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/Module.h:158:32: error: ‘n’ was not declared in this scope
158 | for( size_t i=0; i<n; i++, ++it){
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/Module.h: In member function ‘void* (* Rcpp::Module::get_function_ptr(const std::string&))()’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/Module.h:181:17: error: ‘size_t’ was not declared in this scope; did you mean ‘std::size_t’?
181 | size_t n = functions.size() ;
| ^~~~~~
| std::size_t
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/c++config.h:310:33: note: ‘std::size_t’ declared here
310 | typedef __SIZE_TYPE__ size_t;
| ^~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/Module.h:183:29: error: expected ‘;’ before ‘i’
183 | for( size_t i=0; i<n; i++, ++it){
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/Module.h:183:34: error: ‘i’ was not declared in this scope; did you mean ‘is’?
183 | for( size_t i=0; i<n; i++, ++it){
| ^
| is
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/Module.h:183:36: error: ‘n’ was not declared in this scope
183 | for( size_t i=0; i<n; i++, ++it){
| ^
In file included from /home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/Module.h:510:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h: In member function ‘SEXPREC* Rcpp::class_<Class>::newInstance(SEXPREC**, int)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h:133:13: error: ‘size_t’ was not declared in this scope; did you mean ‘std::size_t’?
133 | size_t n = constructors.size() ;
| ^~~~~~
| std::size_t
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/c++config.h:310:33: note: ‘std::size_t’ declared here
310 | typedef __SIZE_TYPE__ size_t;
| ^~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h:134:25: error: expected ‘;’ before ‘i’
134 | for( size_t i=0; i<n; i++ ){
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h:134:30: error: ‘i’ was not declared in this scope; did you mean ‘is’?
134 | for( size_t i=0; i<n; i++ ){
| ^
| is
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h:134:32: error: ‘n’ was not declared in this scope
134 | for( size_t i=0; i<n; i++ ){
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h:144:13: error: ‘n’ was not declared in this scope
144 | n = factories.size() ;
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h:145:25: error: expected ‘;’ before ‘i’
145 | for( size_t i=0; i<n; i++){
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h:145:30: error: ‘i’ was not declared in this scope; did you mean ‘is’?
145 | for( size_t i=0; i<n; i++){
| ^
| is
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h: In member function ‘bool Rcpp::class_<Class>::has_default_constructor()’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h:159:13: error: ‘size_t’ was not declared in this scope; did you mean ‘std::size_t’?
159 | size_t n = constructors.size() ;
| ^~~~~~
| std::size_t
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/c++config.h:310:33: note: ‘std::size_t’ declared here
310 | typedef __SIZE_TYPE__ size_t;
| ^~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h:161:25: error: expected ‘;’ before ‘i’
161 | for( size_t i=0; i<n; i++ ){
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h:161:30: error: ‘i’ was not declared in this scope; did you mean ‘is’?
161 | for( size_t i=0; i<n; i++ ){
| ^
| is
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h:161:32: error: ‘n’ was not declared in this scope
161 | for( size_t i=0; i<n; i++ ){
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h:165:13: error: ‘n’ was not declared in this scope
165 | n = factories.size() ;
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h:167:25: error: expected ‘;’ before ‘i’
167 | for( size_t i=0; i<n; i++ ){
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h:167:30: error: ‘i’ was not declared in this scope; did you mean ‘is’?
167 | for( size_t i=0; i<n; i++ ){
| ^
| is
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h: In member function ‘SEXPREC* Rcpp::class_<Class>::invoke(SEXP, SEXP, SEXPREC**, int)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h:179:13: error: ‘size_t’ was not declared in this scope; did you mean ‘std::size_t’?
179 | size_t n = mets->size() ;
| ^~~~~~
| std::size_t
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/c++config.h:310:33: note: ‘std::size_t’ declared here
310 | typedef __SIZE_TYPE__ size_t;
| ^~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h:182:25: error: expected ‘;’ before ‘i’
182 | for( size_t i=0; i<n; i++, ++it ){
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h:182:30: error: ‘i’ was not declared in this scope; did you mean ‘is’?
182 | for( size_t i=0; i<n; i++, ++it ){
| ^
| is
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h:182:32: error: ‘n’ was not declared in this scope
182 | for( size_t i=0; i<n; i++, ++it ){
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h: In member function ‘SEXPREC* Rcpp::class_<Class>::invoke_void(SEXP, SEXP, SEXPREC**, int)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h:206:13: error: ‘size_t’ was not declared in this scope; did you mean ‘std::size_t’?
206 | size_t n = mets->size() ;
| ^~~~~~
| std::size_t
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/c++config.h:310:33: note: ‘std::size_t’ declared here
310 | typedef __SIZE_TYPE__ size_t;
| ^~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h:209:25: error: expected ‘;’ before ‘i’
209 | for( size_t i=0; i<n; i++, ++it ){
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h:209:30: error: ‘i’ was not declared in this scope; did you mean ‘is’?
209 | for( size_t i=0; i<n; i++, ++it ){
| ^
| is
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h:209:32: error: ‘n’ was not declared in this scope
209 | for( size_t i=0; i<n; i++, ++it ){
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h: In member function ‘SEXPREC* Rcpp::class_<Class>::invoke_notvoid(SEXP, SEXP, SEXPREC**, int)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h:228:13: error: ‘size_t’ was not declared in this scope; did you mean ‘std::size_t’?
228 | size_t n = mets->size() ;
| ^~~~~~
| std::size_t
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/c++config.h:310:33: note: ‘std::size_t’ declared here
310 | typedef __SIZE_TYPE__ size_t;
| ^~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h:231:25: error: expected ‘;’ before ‘i’
231 | for( size_t i=0; i<n; i++, ++it ){
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h:231:30: error: ‘i’ was not declared in this scope; did you mean ‘is’?
231 | for( size_t i=0; i<n; i++, ++it ){
| ^
| is
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h:231:32: error: ‘n’ was not declared in this scope
231 | for( size_t i=0; i<n; i++, ++it ){
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h: In member function ‘Rcpp::CharacterVector Rcpp::class_<Class>::method_names()’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h:318:13: error: ‘size_t’ was not declared in this scope; did you mean ‘std::size_t’?
318 | size_t n = 0 ;
| ^~~~~~
| std::size_t
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/c++config.h:310:33: note: ‘std::size_t’ declared here
310 | typedef __SIZE_TYPE__ size_t;
| ^~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h:319:20: error: expected ‘;’ before ‘s’
319 | size_t s = vec_methods.size() ;
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h:321:25: error: expected ‘;’ before ‘i’
321 | for( size_t i=0; i<s; i++, ++it){
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h:321:30: error: ‘i’ was not declared in this scope; did you mean ‘is’?
321 | for( size_t i=0; i<s; i++, ++it){
| ^
| is
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h:321:32: error: ‘s’ was not declared in this scope; did you mean ‘is’?
321 | for( size_t i=0; i<s; i++, ++it){
| ^
| is
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h:322:17: error: ‘n’ was not declared in this scope
322 | n += (it->second)->size() ;
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h:324:39: error: ‘n’ was not declared in this scope
324 | Rcpp::CharacterVector out(n) ;
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h:326:20: error: expected ‘;’ before ‘k’
326 | size_t k = 0 ;
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h:327:25: error: expected ‘;’ before ‘i’
327 | for( size_t i=0; i<s; i++, ++it){
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h:327:30: error: ‘i’ was not declared in this scope; did you mean ‘is’?
327 | for( size_t i=0; i<s; i++, ++it){
| ^
| is
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h:327:32: error: ‘s’ was not declared in this scope; did you mean ‘is’?
327 | for( size_t i=0; i<s; i++, ++it){
| ^
| is
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h:330:29: error: expected ‘;’ before ‘j’
330 | for( size_t j=0; j<n; j++, k++){
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h:330:34: error: ‘j’ was not declared in this scope
330 | for( size_t j=0; j<n; j++, k++){
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h:330:44: error: ‘k’ was not declared in this scope
330 | for( size_t j=0; j<n; j++, k++){
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h: In member function ‘Rcpp::IntegerVector Rcpp::class_<Class>::methods_arity()’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h:338:13: error: ‘size_t’ was not declared in this scope; did you mean ‘std::size_t’?
338 | size_t n = 0 ;
| ^~~~~~
| std::size_t
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/c++config.h:310:33: note: ‘std::size_t’ declared here
310 | typedef __SIZE_TYPE__ size_t;
| ^~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h:339:20: error: expected ‘;’ before ‘s’
339 | size_t s = vec_methods.size() ;
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h:341:25: error: expected ‘;’ before ‘i’
341 | for( size_t i=0; i<s; i++, ++it){
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h:341:30: error: ‘i’ was not declared in this scope; did you mean ‘is’?
341 | for( size_t i=0; i<s; i++, ++it){
| ^
| is
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h:341:32: error: ‘s’ was not declared in this scope; did you mean ‘is’?
341 | for( size_t i=0; i<s; i++, ++it){
| ^
| is
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h:342:17: error: ‘n’ was not declared in this scope
342 | n += (it->second)->size() ;
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h:344:42: error: ‘n’ was not declared in this scope
344 | Rcpp::CharacterVector mnames(n) ;
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h:347:20: error: expected ‘;’ before ‘k’
347 | size_t k = 0 ;
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h:348:25: error: expected ‘;’ before ‘i’
348 | for( size_t i=0; i<s; i++, ++it){
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h:348:30: error: ‘i’ was not declared in this scope; did you mean ‘is’?
348 | for( size_t i=0; i<s; i++, ++it){
| ^
| is
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h:348:32: error: ‘s’ was not declared in this scope; did you mean ‘is’?
348 | for( size_t i=0; i<s; i++, ++it){
| ^
| is
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h:352:29: error: expected ‘;’ before ‘j’
352 | for( size_t j=0; j<n; j++, k++, ++m_it){
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h:352:34: error: ‘j’ was not declared in this scope
352 | for( size_t j=0; j<n; j++, k++, ++m_it){
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h:352:44: error: ‘k’ was not declared in this scope
352 | for( size_t j=0; j<n; j++, k++, ++m_it){
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h: In member function ‘Rcpp::LogicalVector Rcpp::class_<Class>::methods_voidness()’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h:362:13: error: ‘size_t’ was not declared in this scope; did you mean ‘std::size_t’?
362 | size_t n = 0 ;
| ^~~~~~
| std::size_t
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/c++config.h:310:33: note: ‘std::size_t’ declared here
310 | typedef __SIZE_TYPE__ size_t;
| ^~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h:363:20: error: expected ‘;’ before ‘s’
363 | size_t s = vec_methods.size() ;
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h:365:25: error: expected ‘;’ before ‘i’
365 | for( size_t i=0; i<s; i++, ++it){
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h:365:30: error: ‘i’ was not declared in this scope; did you mean ‘is’?
365 | for( size_t i=0; i<s; i++, ++it){
| ^
| is
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h:365:32: error: ‘s’ was not declared in this scope; did you mean ‘is’?
365 | for( size_t i=0; i<s; i++, ++it){
| ^
| is
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h:366:17: error: ‘n’ was not declared in this scope
366 | n += (it->second)->size() ;
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h:368:42: error: ‘n’ was not declared in this scope
368 | Rcpp::CharacterVector mnames(n) ;
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h:371:20: error: expected ‘;’ before ‘k’
371 | size_t k = 0 ;
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h:372:25: error: expected ‘;’ before ‘i’
372 | for( size_t i=0; i<s; i++, ++it){
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h:372:30: error: ‘i’ was not declared in this scope; did you mean ‘is’?
372 | for( size_t i=0; i<s; i++, ++it){
| ^
| is
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h:372:32: error: ‘s’ was not declared in this scope; did you mean ‘is’?
372 | for( size_t i=0; i<s; i++, ++it){
| ^
| is
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h:376:29: error: expected ‘;’ before ‘j’
376 | for( size_t j=0; j<n; j++, k++, ++m_it){
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h:376:34: error: ‘j’ was not declared in this scope
376 | for( size_t j=0; j<n; j++, k++, ++m_it){
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h:376:44: error: ‘k’ was not declared in this scope
376 | for( size_t j=0; j<n; j++, k++, ++m_it){
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h: In member function ‘Rcpp::CharacterVector Rcpp::class_<Class>::property_names()’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h:387:13: error: ‘size_t’ was not declared in this scope; did you mean ‘std::size_t’?
387 | size_t n = properties.size() ;
| ^~~~~~
| std::size_t
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/c++config.h:310:33: note: ‘std::size_t’ declared here
310 | typedef __SIZE_TYPE__ size_t;
| ^~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h:388:39: error: ‘n’ was not declared in this scope
388 | Rcpp::CharacterVector out(n) ;
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h:390:25: error: expected ‘;’ before ‘i’
390 | for( size_t i=0; i<n; i++, ++it){
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h:390:30: error: ‘i’ was not declared in this scope; did you mean ‘is’?
390 | for( size_t i=0; i<n; i++, ++it){
| ^
| is
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h: In member function ‘Rcpp::List Rcpp::class_<Class>::property_classes()’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h:397:13: error: ‘size_t’ was not declared in this scope; did you mean ‘std::size_t’?
397 | size_t n = properties.size() ;
| ^~~~~~
| std::size_t
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/c++config.h:310:33: note: ‘std::size_t’ declared here
310 | typedef __SIZE_TYPE__ size_t;
| ^~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h:398:42: error: ‘n’ was not declared in this scope
398 | Rcpp::CharacterVector pnames(n) ;
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h:401:25: error: expected ‘;’ before ‘i’
401 | for( size_t i=0; i<n; i++, ++it){
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h:401:30: error: ‘i’ was not declared in this scope; did you mean ‘is’?
401 | for( size_t i=0; i<n; i++, ++it){
| ^
| is
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h: In member function ‘Rcpp::CharacterVector Rcpp::class_<Class>::complete()’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h:410:13: error: ‘size_t’ was not declared in this scope; did you mean ‘std::size_t’?
410 | size_t n = vec_methods.size() - specials ;
| ^~~~~~
| std::size_t
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/c++config.h:310:33: note: ‘std::size_t’ declared here
310 | typedef __SIZE_TYPE__ size_t;
| ^~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h:411:20: error: expected ‘;’ before ‘ntotal’
411 | size_t ntotal = n + properties.size() ;
| ^~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h:412:39: error: ‘ntotal’ was not declared in this scope
412 | Rcpp::CharacterVector out(ntotal) ;
| ^~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h:415:20: error: expected ‘;’ before ‘i’
415 | size_t i=0 ;
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h:416:20: error: ‘i’ was not declared in this scope; did you mean ‘is’?
416 | for( ; i<n; ++it){
| ^
| is
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h:416:22: error: ‘n’ was not declared in this scope
416 | for( ; i<n; ++it){
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h:429:20: error: ‘i’ was not declared in this scope; did you mean ‘is’?
429 | for( ; i<ntotal; i++, ++prop_it){
| ^
| is
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h: In member function ‘Rcpp::List Rcpp::class_<Class>::fields(const Rcpp::class_Base::XP_Class&)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h:451:13: error: ‘size_t’ was not declared in this scope; did you mean ‘std::size_t’?
451 | size_t n = properties.size() ;
| ^~~~~~
| std::size_t
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/c++config.h:310:33: note: ‘std::size_t’ declared here
310 | typedef __SIZE_TYPE__ size_t;
| ^~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h:452:42: error: ‘n’ was not declared in this scope
452 | Rcpp::CharacterVector pnames(n) ;
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h:455:25: error: expected ‘;’ before ‘i’
455 | for( size_t i=0; i<n; i++, ++it){
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h:455:30: error: ‘i’ was not declared in this scope; did you mean ‘is’?
455 | for( size_t i=0; i<n; i++, ++it){
| ^
| is
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h: In member function ‘Rcpp::List Rcpp::class_<Class>::getMethods(const Rcpp::class_Base::XP_Class&, std::string&)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h:468:13: error: ‘size_t’ was not declared in this scope; did you mean ‘std::size_t’?
468 | size_t n = vec_methods.size() ;
| ^~~~~~
| std::size_t
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/c++config.h:310:33: note: ‘std::size_t’ declared here
310 | typedef __SIZE_TYPE__ size_t;
| ^~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h:469:42: error: ‘n’ was not declared in this scope
469 | Rcpp::CharacterVector mnames(n) ;
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h:473:25: error: expected ‘;’ before ‘i’
473 | for( size_t i=0; i<n; i++, ++it){
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h:473:30: error: ‘i’ was not declared in this scope; did you mean ‘is’?
473 | for( size_t i=0; i<n; i++, ++it){
| ^
| is
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h: In member function ‘Rcpp::List Rcpp::class_<Class>::getConstructors(const Rcpp::class_Base::XP_Class&, std::string&)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h:483:13: error: ‘size_t’ was not declared in this scope; did you mean ‘std::size_t’?
483 | size_t n = constructors.size() ;
| ^~~~~~
| std::size_t
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/c++config.h:310:33: note: ‘std::size_t’ declared here
310 | typedef __SIZE_TYPE__ size_t;
| ^~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h:484:28: error: ‘n’ was not declared in this scope
484 | Rcpp::List out(n) ;
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h:486:25: error: expected ‘;’ before ‘i’
486 | for( size_t i=0; i<n; i++, ++it){
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/module/class.h:486:30: error: ‘i’ was not declared in this scope; did you mean ‘is’?
486 | for( size_t i=0; i<n; i++, ++it){
| ^
| is
/usr/include/inttypes.h: At global scope:
/usr/include/inttypes.h:327:1: error: ‘__BEGIN_DECLS’ does not name a type
327 | __BEGIN_DECLS
| ^~~~~~~~~~~~~
/usr/include/inttypes.h:336:5: error: ‘imaxdiv_t’ does not name a type
336 | } imaxdiv_t;
| ^~~~~~~~~
/usr/include/inttypes.h:351:40: error: expected initializer before ‘__THROW’
351 | extern intmax_t imaxabs (intmax_t __n) __THROW __attribute__ ((__const__));
| ^~~~~~~
/usr/include/inttypes.h:354:8: error: ‘imaxdiv_t’ does not name a type
354 | extern imaxdiv_t imaxdiv (intmax_t __numer, intmax_t __denom)
| ^~~~~~~~~
/usr/include/inttypes.h:359:68: error: expected initializer before ‘__THROW’
359 | char **__restrict __endptr, int __base) __THROW;
| ^~~~~~~
/usr/include/inttypes.h:363:70: error: expected initializer before ‘__THROW’
363 | char ** __restrict __endptr, int __base) __THROW;
| ^~~~~~~
/usr/include/inttypes.h:368:6: error: expected initializer before ‘__THROW’
368 | __THROW;
| ^~~~~~~
/usr/include/inttypes.h:373:6: error: expected initializer before ‘__THROW’
373 | __THROW;
| ^~~~~~~
/usr/include/inttypes.h:415:1: error: ‘__END_DECLS’ does not name a type
415 | __END_DECLS
| ^~~~~~~~~~~
In file included from /home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/block.h:30,
from /home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/sugar.h:26:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:25:25: error: ‘::exp’ has not been declared; did you mean ‘std::exp’?
25 | VECTORIZED_MATH_1(exp,::exp)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:86:34: note: in definition of macro ‘VECTORIZED_MATH_1’
86 | inline sugar::Vectorized<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1059:5: note: ‘std::exp’ declared here
1059 | exp(const complex<_Tp>& __z) { return __complex_exp(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:25:25: error: ‘::exp’ has not been declared; did you mean ‘std::exp’?
25 | VECTORIZED_MATH_1(exp,::exp)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:86:34: note: in definition of macro ‘VECTORIZED_MATH_1’
86 | inline sugar::Vectorized<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1059:5: note: ‘std::exp’ declared here
1059 | exp(const complex<_Tp>& __z) { return __complex_exp(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:86:49: error: template argument 1 is invalid
86 | inline sugar::Vectorized<__SYMBOL__,NA,T> \
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:25:1: note: in expansion of macro ‘VECTORIZED_MATH_1’
25 | VECTORIZED_MATH_1(exp,::exp)
| ^~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h: In function ‘int Rcpp::exp(const VectorBase<14, NA_, T>&)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:25:25: error: ‘::exp’ has not been declared
25 | VECTORIZED_MATH_1(exp,::exp)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:88:42: note: in definition of macro ‘VECTORIZED_MATH_1’
88 | return sugar::Vectorized<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:25:25: note: suggested alternatives:
25 | VECTORIZED_MATH_1(exp,::exp)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:88:42: note: in definition of macro ‘VECTORIZED_MATH_1’
88 | return sugar::Vectorized<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1059:5: note: ‘std::exp’
1059 | exp(const complex<_Tp>& __z) { return __complex_exp(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:25:19: note: ‘Rcpp::exp’
25 | VECTORIZED_MATH_1(exp,::exp)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:87:9: note: in definition of macro ‘VECTORIZED_MATH_1’
87 | __NAME__( const VectorBase<REALSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:25:25: error: ‘::exp’ has not been declared
25 | VECTORIZED_MATH_1(exp,::exp)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:88:42: note: in definition of macro ‘VECTORIZED_MATH_1’
88 | return sugar::Vectorized<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:25:25: note: suggested alternatives:
25 | VECTORIZED_MATH_1(exp,::exp)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:88:42: note: in definition of macro ‘VECTORIZED_MATH_1’
88 | return sugar::Vectorized<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1059:5: note: ‘std::exp’
1059 | exp(const complex<_Tp>& __z) { return __complex_exp(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:25:19: note: ‘Rcpp::exp’
25 | VECTORIZED_MATH_1(exp,::exp)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:87:9: note: in definition of macro ‘VECTORIZED_MATH_1’
87 | __NAME__( const VectorBase<REALSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:88:57: error: template argument 1 is invalid
88 | return sugar::Vectorized<__SYMBOL__,NA,T>( t ) ; \
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:25:1: note: in expansion of macro ‘VECTORIZED_MATH_1’
25 | VECTORIZED_MATH_1(exp,::exp)
| ^~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h: At global scope:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:25:25: error: ‘::exp’ has not been declared
25 | VECTORIZED_MATH_1(exp,::exp)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:90:34: note: in definition of macro ‘VECTORIZED_MATH_1’
90 | inline sugar::Vectorized<__SYMBOL__,true,NumericVector> \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:25:25: note: suggested alternatives:
25 | VECTORIZED_MATH_1(exp,::exp)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:90:34: note: in definition of macro ‘VECTORIZED_MATH_1’
90 | inline sugar::Vectorized<__SYMBOL__,true,NumericVector> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1059:5: note: ‘std::exp’
1059 | exp(const complex<_Tp>& __z) { return __complex_exp(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:25:19: note: ‘Rcpp::exp’
25 | VECTORIZED_MATH_1(exp,::exp)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:87:9: note: in definition of macro ‘VECTORIZED_MATH_1’
87 | __NAME__( const VectorBase<REALSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:25:25: error: ‘::exp’ has not been declared
25 | VECTORIZED_MATH_1(exp,::exp)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:90:34: note: in definition of macro ‘VECTORIZED_MATH_1’
90 | inline sugar::Vectorized<__SYMBOL__,true,NumericVector> \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:25:25: note: suggested alternatives:
25 | VECTORIZED_MATH_1(exp,::exp)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:90:34: note: in definition of macro ‘VECTORIZED_MATH_1’
90 | inline sugar::Vectorized<__SYMBOL__,true,NumericVector> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1059:5: note: ‘std::exp’
1059 | exp(const complex<_Tp>& __z) { return __complex_exp(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:25:19: note: ‘Rcpp::exp’
25 | VECTORIZED_MATH_1(exp,::exp)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:87:9: note: in definition of macro ‘VECTORIZED_MATH_1’
87 | __NAME__( const VectorBase<REALSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:90:63: error: template argument 1 is invalid
90 | inline sugar::Vectorized<__SYMBOL__,true,NumericVector> \
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:25:1: note: in expansion of macro ‘VECTORIZED_MATH_1’
25 | VECTORIZED_MATH_1(exp,::exp)
| ^~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:25:25: error: ‘::exp’ has not been declared
25 | VECTORIZED_MATH_1(exp,::exp)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:93:41: note: in definition of macro ‘VECTORIZED_MATH_1’
93 | inline sugar::Vectorized_INTSXP<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:25:25: note: suggested alternatives:
25 | VECTORIZED_MATH_1(exp,::exp)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:93:41: note: in definition of macro ‘VECTORIZED_MATH_1’
93 | inline sugar::Vectorized_INTSXP<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1059:5: note: ‘std::exp’
1059 | exp(const complex<_Tp>& __z) { return __complex_exp(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:25:19: note: ‘Rcpp::exp’
25 | VECTORIZED_MATH_1(exp,::exp)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:91:9: note: in definition of macro ‘VECTORIZED_MATH_1’
91 | __NAME__( SEXP x){ return __NAME__( NumericVector( x ) ) ; } \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:25:25: error: ‘::exp’ has not been declared
25 | VECTORIZED_MATH_1(exp,::exp)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:93:41: note: in definition of macro ‘VECTORIZED_MATH_1’
93 | inline sugar::Vectorized_INTSXP<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:25:25: note: suggested alternatives:
25 | VECTORIZED_MATH_1(exp,::exp)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:93:41: note: in definition of macro ‘VECTORIZED_MATH_1’
93 | inline sugar::Vectorized_INTSXP<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1059:5: note: ‘std::exp’
1059 | exp(const complex<_Tp>& __z) { return __complex_exp(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:25:19: note: ‘Rcpp::exp’
25 | VECTORIZED_MATH_1(exp,::exp)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:91:9: note: in definition of macro ‘VECTORIZED_MATH_1’
91 | __NAME__( SEXP x){ return __NAME__( NumericVector( x ) ) ; } \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:93:56: error: template argument 1 is invalid
93 | inline sugar::Vectorized_INTSXP<__SYMBOL__,NA,T> \
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:25:1: note: in expansion of macro ‘VECTORIZED_MATH_1’
25 | VECTORIZED_MATH_1(exp,::exp)
| ^~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h: In function ‘int Rcpp::exp(const VectorBase<13, NA_, T>&)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:25:25: error: ‘::exp’ has not been declared
25 | VECTORIZED_MATH_1(exp,::exp)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:95:49: note: in definition of macro ‘VECTORIZED_MATH_1’
95 | return sugar::Vectorized_INTSXP<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:25:25: note: suggested alternatives:
25 | VECTORIZED_MATH_1(exp,::exp)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:95:49: note: in definition of macro ‘VECTORIZED_MATH_1’
95 | return sugar::Vectorized_INTSXP<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1059:5: note: ‘std::exp’
1059 | exp(const complex<_Tp>& __z) { return __complex_exp(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:25:19: note: ‘Rcpp::exp’
25 | VECTORIZED_MATH_1(exp,::exp)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:94:9: note: in definition of macro ‘VECTORIZED_MATH_1’
94 | __NAME__( const VectorBase<INTSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:25:25: error: ‘::exp’ has not been declared
25 | VECTORIZED_MATH_1(exp,::exp)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:95:49: note: in definition of macro ‘VECTORIZED_MATH_1’
95 | return sugar::Vectorized_INTSXP<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:25:25: note: suggested alternatives:
25 | VECTORIZED_MATH_1(exp,::exp)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:95:49: note: in definition of macro ‘VECTORIZED_MATH_1’
95 | return sugar::Vectorized_INTSXP<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1059:5: note: ‘std::exp’
1059 | exp(const complex<_Tp>& __z) { return __complex_exp(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:25:19: note: ‘Rcpp::exp’
25 | VECTORIZED_MATH_1(exp,::exp)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:94:9: note: in definition of macro ‘VECTORIZED_MATH_1’
94 | __NAME__( const VectorBase<INTSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:95:64: error: template argument 1 is invalid
95 | return sugar::Vectorized_INTSXP<__SYMBOL__,NA,T>( t ) ; \
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:25:1: note: in expansion of macro ‘VECTORIZED_MATH_1’
25 | VECTORIZED_MATH_1(exp,::exp)
| ^~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h: At global scope:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:26:26: error: ‘::acos’ has not been declared; did you mean ‘std::acos’?
26 | VECTORIZED_MATH_1(acos,::acos)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:86:34: note: in definition of macro ‘VECTORIZED_MATH_1’
86 | inline sugar::Vectorized<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:2213:5: note: ‘std::acos’ declared here
2213 | acos(const std::complex<_Tp>& __z)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:26:26: error: ‘::acos’ has not been declared; did you mean ‘std::acos’?
26 | VECTORIZED_MATH_1(acos,::acos)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:86:34: note: in definition of macro ‘VECTORIZED_MATH_1’
86 | inline sugar::Vectorized<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:2213:5: note: ‘std::acos’ declared here
2213 | acos(const std::complex<_Tp>& __z)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:86:49: error: template argument 1 is invalid
86 | inline sugar::Vectorized<__SYMBOL__,NA,T> \
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:26:1: note: in expansion of macro ‘VECTORIZED_MATH_1’
26 | VECTORIZED_MATH_1(acos,::acos)
| ^~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h: In function ‘int Rcpp::acos(const VectorBase<14, NA_, T>&)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:26:26: error: ‘::acos’ has not been declared
26 | VECTORIZED_MATH_1(acos,::acos)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:88:42: note: in definition of macro ‘VECTORIZED_MATH_1’
88 | return sugar::Vectorized<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:26:26: note: suggested alternatives:
26 | VECTORIZED_MATH_1(acos,::acos)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:88:42: note: in definition of macro ‘VECTORIZED_MATH_1’
88 | return sugar::Vectorized<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:2213:5: note: ‘std::acos’
2213 | acos(const std::complex<_Tp>& __z)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:26:19: note: ‘Rcpp::acos’
26 | VECTORIZED_MATH_1(acos,::acos)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:87:9: note: in definition of macro ‘VECTORIZED_MATH_1’
87 | __NAME__( const VectorBase<REALSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:26:26: error: ‘::acos’ has not been declared
26 | VECTORIZED_MATH_1(acos,::acos)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:88:42: note: in definition of macro ‘VECTORIZED_MATH_1’
88 | return sugar::Vectorized<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:26:26: note: suggested alternatives:
26 | VECTORIZED_MATH_1(acos,::acos)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:88:42: note: in definition of macro ‘VECTORIZED_MATH_1’
88 | return sugar::Vectorized<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:2213:5: note: ‘std::acos’
2213 | acos(const std::complex<_Tp>& __z)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:26:19: note: ‘Rcpp::acos’
26 | VECTORIZED_MATH_1(acos,::acos)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:87:9: note: in definition of macro ‘VECTORIZED_MATH_1’
87 | __NAME__( const VectorBase<REALSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:88:57: error: template argument 1 is invalid
88 | return sugar::Vectorized<__SYMBOL__,NA,T>( t ) ; \
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:26:1: note: in expansion of macro ‘VECTORIZED_MATH_1’
26 | VECTORIZED_MATH_1(acos,::acos)
| ^~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h: At global scope:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:26:26: error: ‘::acos’ has not been declared
26 | VECTORIZED_MATH_1(acos,::acos)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:90:34: note: in definition of macro ‘VECTORIZED_MATH_1’
90 | inline sugar::Vectorized<__SYMBOL__,true,NumericVector> \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:26:26: note: suggested alternatives:
26 | VECTORIZED_MATH_1(acos,::acos)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:90:34: note: in definition of macro ‘VECTORIZED_MATH_1’
90 | inline sugar::Vectorized<__SYMBOL__,true,NumericVector> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:2213:5: note: ‘std::acos’
2213 | acos(const std::complex<_Tp>& __z)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:26:19: note: ‘Rcpp::acos’
26 | VECTORIZED_MATH_1(acos,::acos)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:87:9: note: in definition of macro ‘VECTORIZED_MATH_1’
87 | __NAME__( const VectorBase<REALSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:26:26: error: ‘::acos’ has not been declared
26 | VECTORIZED_MATH_1(acos,::acos)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:90:34: note: in definition of macro ‘VECTORIZED_MATH_1’
90 | inline sugar::Vectorized<__SYMBOL__,true,NumericVector> \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:26:26: note: suggested alternatives:
26 | VECTORIZED_MATH_1(acos,::acos)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:90:34: note: in definition of macro ‘VECTORIZED_MATH_1’
90 | inline sugar::Vectorized<__SYMBOL__,true,NumericVector> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:2213:5: note: ‘std::acos’
2213 | acos(const std::complex<_Tp>& __z)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:26:19: note: ‘Rcpp::acos’
26 | VECTORIZED_MATH_1(acos,::acos)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:87:9: note: in definition of macro ‘VECTORIZED_MATH_1’
87 | __NAME__( const VectorBase<REALSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:90:63: error: template argument 1 is invalid
90 | inline sugar::Vectorized<__SYMBOL__,true,NumericVector> \
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:26:1: note: in expansion of macro ‘VECTORIZED_MATH_1’
26 | VECTORIZED_MATH_1(acos,::acos)
| ^~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:26:26: error: ‘::acos’ has not been declared
26 | VECTORIZED_MATH_1(acos,::acos)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:93:41: note: in definition of macro ‘VECTORIZED_MATH_1’
93 | inline sugar::Vectorized_INTSXP<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:26:26: note: suggested alternatives:
26 | VECTORIZED_MATH_1(acos,::acos)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:93:41: note: in definition of macro ‘VECTORIZED_MATH_1’
93 | inline sugar::Vectorized_INTSXP<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:2213:5: note: ‘std::acos’
2213 | acos(const std::complex<_Tp>& __z)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:26:19: note: ‘Rcpp::acos’
26 | VECTORIZED_MATH_1(acos,::acos)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:91:9: note: in definition of macro ‘VECTORIZED_MATH_1’
91 | __NAME__( SEXP x){ return __NAME__( NumericVector( x ) ) ; } \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:26:26: error: ‘::acos’ has not been declared
26 | VECTORIZED_MATH_1(acos,::acos)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:93:41: note: in definition of macro ‘VECTORIZED_MATH_1’
93 | inline sugar::Vectorized_INTSXP<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:26:26: note: suggested alternatives:
26 | VECTORIZED_MATH_1(acos,::acos)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:93:41: note: in definition of macro ‘VECTORIZED_MATH_1’
93 | inline sugar::Vectorized_INTSXP<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:2213:5: note: ‘std::acos’
2213 | acos(const std::complex<_Tp>& __z)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:26:19: note: ‘Rcpp::acos’
26 | VECTORIZED_MATH_1(acos,::acos)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:91:9: note: in definition of macro ‘VECTORIZED_MATH_1’
91 | __NAME__( SEXP x){ return __NAME__( NumericVector( x ) ) ; } \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:93:56: error: template argument 1 is invalid
93 | inline sugar::Vectorized_INTSXP<__SYMBOL__,NA,T> \
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:26:1: note: in expansion of macro ‘VECTORIZED_MATH_1’
26 | VECTORIZED_MATH_1(acos,::acos)
| ^~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h: In function ‘int Rcpp::acos(const VectorBase<13, NA_, T>&)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:26:26: error: ‘::acos’ has not been declared
26 | VECTORIZED_MATH_1(acos,::acos)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:95:49: note: in definition of macro ‘VECTORIZED_MATH_1’
95 | return sugar::Vectorized_INTSXP<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:26:26: note: suggested alternatives:
26 | VECTORIZED_MATH_1(acos,::acos)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:95:49: note: in definition of macro ‘VECTORIZED_MATH_1’
95 | return sugar::Vectorized_INTSXP<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:2213:5: note: ‘std::acos’
2213 | acos(const std::complex<_Tp>& __z)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:26:19: note: ‘Rcpp::acos’
26 | VECTORIZED_MATH_1(acos,::acos)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:94:9: note: in definition of macro ‘VECTORIZED_MATH_1’
94 | __NAME__( const VectorBase<INTSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:26:26: error: ‘::acos’ has not been declared
26 | VECTORIZED_MATH_1(acos,::acos)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:95:49: note: in definition of macro ‘VECTORIZED_MATH_1’
95 | return sugar::Vectorized_INTSXP<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:26:26: note: suggested alternatives:
26 | VECTORIZED_MATH_1(acos,::acos)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:95:49: note: in definition of macro ‘VECTORIZED_MATH_1’
95 | return sugar::Vectorized_INTSXP<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:2213:5: note: ‘std::acos’
2213 | acos(const std::complex<_Tp>& __z)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:26:19: note: ‘Rcpp::acos’
26 | VECTORIZED_MATH_1(acos,::acos)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:94:9: note: in definition of macro ‘VECTORIZED_MATH_1’
94 | __NAME__( const VectorBase<INTSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:95:64: error: template argument 1 is invalid
95 | return sugar::Vectorized_INTSXP<__SYMBOL__,NA,T>( t ) ; \
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:26:1: note: in expansion of macro ‘VECTORIZED_MATH_1’
26 | VECTORIZED_MATH_1(acos,::acos)
| ^~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h: At global scope:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:27:26: error: ‘::asin’ has not been declared; did you mean ‘std::asin’?
27 | VECTORIZED_MATH_1(asin,::asin)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:86:34: note: in definition of macro ‘VECTORIZED_MATH_1’
86 | inline sugar::Vectorized<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:2249:5: note: ‘std::asin’ declared here
2249 | asin(const std::complex<_Tp>& __z)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:27:26: error: ‘::asin’ has not been declared; did you mean ‘std::asin’?
27 | VECTORIZED_MATH_1(asin,::asin)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:86:34: note: in definition of macro ‘VECTORIZED_MATH_1’
86 | inline sugar::Vectorized<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:2249:5: note: ‘std::asin’ declared here
2249 | asin(const std::complex<_Tp>& __z)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:86:49: error: template argument 1 is invalid
86 | inline sugar::Vectorized<__SYMBOL__,NA,T> \
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:27:1: note: in expansion of macro ‘VECTORIZED_MATH_1’
27 | VECTORIZED_MATH_1(asin,::asin)
| ^~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h: In function ‘int Rcpp::asin(const VectorBase<14, NA_, T>&)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:27:26: error: ‘::asin’ has not been declared
27 | VECTORIZED_MATH_1(asin,::asin)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:88:42: note: in definition of macro ‘VECTORIZED_MATH_1’
88 | return sugar::Vectorized<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:27:26: note: suggested alternatives:
27 | VECTORIZED_MATH_1(asin,::asin)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:88:42: note: in definition of macro ‘VECTORIZED_MATH_1’
88 | return sugar::Vectorized<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:2249:5: note: ‘std::asin’
2249 | asin(const std::complex<_Tp>& __z)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:27:19: note: ‘Rcpp::asin’
27 | VECTORIZED_MATH_1(asin,::asin)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:87:9: note: in definition of macro ‘VECTORIZED_MATH_1’
87 | __NAME__( const VectorBase<REALSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:27:26: error: ‘::asin’ has not been declared
27 | VECTORIZED_MATH_1(asin,::asin)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:88:42: note: in definition of macro ‘VECTORIZED_MATH_1’
88 | return sugar::Vectorized<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:27:26: note: suggested alternatives:
27 | VECTORIZED_MATH_1(asin,::asin)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:88:42: note: in definition of macro ‘VECTORIZED_MATH_1’
88 | return sugar::Vectorized<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:2249:5: note: ‘std::asin’
2249 | asin(const std::complex<_Tp>& __z)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:27:19: note: ‘Rcpp::asin’
27 | VECTORIZED_MATH_1(asin,::asin)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:87:9: note: in definition of macro ‘VECTORIZED_MATH_1’
87 | __NAME__( const VectorBase<REALSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:88:57: error: template argument 1 is invalid
88 | return sugar::Vectorized<__SYMBOL__,NA,T>( t ) ; \
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:27:1: note: in expansion of macro ‘VECTORIZED_MATH_1’
27 | VECTORIZED_MATH_1(asin,::asin)
| ^~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h: At global scope:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:27:26: error: ‘::asin’ has not been declared
27 | VECTORIZED_MATH_1(asin,::asin)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:90:34: note: in definition of macro ‘VECTORIZED_MATH_1’
90 | inline sugar::Vectorized<__SYMBOL__,true,NumericVector> \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:27:26: note: suggested alternatives:
27 | VECTORIZED_MATH_1(asin,::asin)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:90:34: note: in definition of macro ‘VECTORIZED_MATH_1’
90 | inline sugar::Vectorized<__SYMBOL__,true,NumericVector> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:2249:5: note: ‘std::asin’
2249 | asin(const std::complex<_Tp>& __z)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:27:19: note: ‘Rcpp::asin’
27 | VECTORIZED_MATH_1(asin,::asin)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:87:9: note: in definition of macro ‘VECTORIZED_MATH_1’
87 | __NAME__( const VectorBase<REALSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:27:26: error: ‘::asin’ has not been declared
27 | VECTORIZED_MATH_1(asin,::asin)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:90:34: note: in definition of macro ‘VECTORIZED_MATH_1’
90 | inline sugar::Vectorized<__SYMBOL__,true,NumericVector> \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:27:26: note: suggested alternatives:
27 | VECTORIZED_MATH_1(asin,::asin)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:90:34: note: in definition of macro ‘VECTORIZED_MATH_1’
90 | inline sugar::Vectorized<__SYMBOL__,true,NumericVector> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:2249:5: note: ‘std::asin’
2249 | asin(const std::complex<_Tp>& __z)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:27:19: note: ‘Rcpp::asin’
27 | VECTORIZED_MATH_1(asin,::asin)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:87:9: note: in definition of macro ‘VECTORIZED_MATH_1’
87 | __NAME__( const VectorBase<REALSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:90:63: error: template argument 1 is invalid
90 | inline sugar::Vectorized<__SYMBOL__,true,NumericVector> \
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:27:1: note: in expansion of macro ‘VECTORIZED_MATH_1’
27 | VECTORIZED_MATH_1(asin,::asin)
| ^~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:27:26: error: ‘::asin’ has not been declared
27 | VECTORIZED_MATH_1(asin,::asin)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:93:41: note: in definition of macro ‘VECTORIZED_MATH_1’
93 | inline sugar::Vectorized_INTSXP<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:27:26: note: suggested alternatives:
27 | VECTORIZED_MATH_1(asin,::asin)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:93:41: note: in definition of macro ‘VECTORIZED_MATH_1’
93 | inline sugar::Vectorized_INTSXP<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:2249:5: note: ‘std::asin’
2249 | asin(const std::complex<_Tp>& __z)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:27:19: note: ‘Rcpp::asin’
27 | VECTORIZED_MATH_1(asin,::asin)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:91:9: note: in definition of macro ‘VECTORIZED_MATH_1’
91 | __NAME__( SEXP x){ return __NAME__( NumericVector( x ) ) ; } \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:27:26: error: ‘::asin’ has not been declared
27 | VECTORIZED_MATH_1(asin,::asin)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:93:41: note: in definition of macro ‘VECTORIZED_MATH_1’
93 | inline sugar::Vectorized_INTSXP<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:27:26: note: suggested alternatives:
27 | VECTORIZED_MATH_1(asin,::asin)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:93:41: note: in definition of macro ‘VECTORIZED_MATH_1’
93 | inline sugar::Vectorized_INTSXP<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:2249:5: note: ‘std::asin’
2249 | asin(const std::complex<_Tp>& __z)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:27:19: note: ‘Rcpp::asin’
27 | VECTORIZED_MATH_1(asin,::asin)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:91:9: note: in definition of macro ‘VECTORIZED_MATH_1’
91 | __NAME__( SEXP x){ return __NAME__( NumericVector( x ) ) ; } \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:93:56: error: template argument 1 is invalid
93 | inline sugar::Vectorized_INTSXP<__SYMBOL__,NA,T> \
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:27:1: note: in expansion of macro ‘VECTORIZED_MATH_1’
27 | VECTORIZED_MATH_1(asin,::asin)
| ^~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h: In function ‘int Rcpp::asin(const VectorBase<13, NA_, T>&)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:27:26: error: ‘::asin’ has not been declared
27 | VECTORIZED_MATH_1(asin,::asin)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:95:49: note: in definition of macro ‘VECTORIZED_MATH_1’
95 | return sugar::Vectorized_INTSXP<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:27:26: note: suggested alternatives:
27 | VECTORIZED_MATH_1(asin,::asin)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:95:49: note: in definition of macro ‘VECTORIZED_MATH_1’
95 | return sugar::Vectorized_INTSXP<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:2249:5: note: ‘std::asin’
2249 | asin(const std::complex<_Tp>& __z)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:27:19: note: ‘Rcpp::asin’
27 | VECTORIZED_MATH_1(asin,::asin)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:94:9: note: in definition of macro ‘VECTORIZED_MATH_1’
94 | __NAME__( const VectorBase<INTSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:27:26: error: ‘::asin’ has not been declared
27 | VECTORIZED_MATH_1(asin,::asin)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:95:49: note: in definition of macro ‘VECTORIZED_MATH_1’
95 | return sugar::Vectorized_INTSXP<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:27:26: note: suggested alternatives:
27 | VECTORIZED_MATH_1(asin,::asin)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:95:49: note: in definition of macro ‘VECTORIZED_MATH_1’
95 | return sugar::Vectorized_INTSXP<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:2249:5: note: ‘std::asin’
2249 | asin(const std::complex<_Tp>& __z)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:27:19: note: ‘Rcpp::asin’
27 | VECTORIZED_MATH_1(asin,::asin)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:94:9: note: in definition of macro ‘VECTORIZED_MATH_1’
94 | __NAME__( const VectorBase<INTSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:95:64: error: template argument 1 is invalid
95 | return sugar::Vectorized_INTSXP<__SYMBOL__,NA,T>( t ) ; \
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:27:1: note: in expansion of macro ‘VECTORIZED_MATH_1’
27 | VECTORIZED_MATH_1(asin,::asin)
| ^~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h: At global scope:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:28:26: error: ‘::atan’ has not been declared; did you mean ‘std::atan’?
28 | VECTORIZED_MATH_1(atan,::atan)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:86:34: note: in definition of macro ‘VECTORIZED_MATH_1’
86 | inline sugar::Vectorized<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:2293:5: note: ‘std::atan’ declared here
2293 | atan(const std::complex<_Tp>& __z)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:28:26: error: ‘::atan’ has not been declared; did you mean ‘std::atan’?
28 | VECTORIZED_MATH_1(atan,::atan)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:86:34: note: in definition of macro ‘VECTORIZED_MATH_1’
86 | inline sugar::Vectorized<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:2293:5: note: ‘std::atan’ declared here
2293 | atan(const std::complex<_Tp>& __z)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:86:49: error: template argument 1 is invalid
86 | inline sugar::Vectorized<__SYMBOL__,NA,T> \
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:28:1: note: in expansion of macro ‘VECTORIZED_MATH_1’
28 | VECTORIZED_MATH_1(atan,::atan)
| ^~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h: In function ‘int Rcpp::atan(const VectorBase<14, NA_, T>&)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:28:26: error: ‘::atan’ has not been declared
28 | VECTORIZED_MATH_1(atan,::atan)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:88:42: note: in definition of macro ‘VECTORIZED_MATH_1’
88 | return sugar::Vectorized<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:28:26: note: suggested alternatives:
28 | VECTORIZED_MATH_1(atan,::atan)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:88:42: note: in definition of macro ‘VECTORIZED_MATH_1’
88 | return sugar::Vectorized<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:2293:5: note: ‘std::atan’
2293 | atan(const std::complex<_Tp>& __z)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:28:19: note: ‘Rcpp::atan’
28 | VECTORIZED_MATH_1(atan,::atan)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:87:9: note: in definition of macro ‘VECTORIZED_MATH_1’
87 | __NAME__( const VectorBase<REALSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:28:26: error: ‘::atan’ has not been declared
28 | VECTORIZED_MATH_1(atan,::atan)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:88:42: note: in definition of macro ‘VECTORIZED_MATH_1’
88 | return sugar::Vectorized<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:28:26: note: suggested alternatives:
28 | VECTORIZED_MATH_1(atan,::atan)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:88:42: note: in definition of macro ‘VECTORIZED_MATH_1’
88 | return sugar::Vectorized<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:2293:5: note: ‘std::atan’
2293 | atan(const std::complex<_Tp>& __z)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:28:19: note: ‘Rcpp::atan’
28 | VECTORIZED_MATH_1(atan,::atan)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:87:9: note: in definition of macro ‘VECTORIZED_MATH_1’
87 | __NAME__( const VectorBase<REALSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:88:57: error: template argument 1 is invalid
88 | return sugar::Vectorized<__SYMBOL__,NA,T>( t ) ; \
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:28:1: note: in expansion of macro ‘VECTORIZED_MATH_1’
28 | VECTORIZED_MATH_1(atan,::atan)
| ^~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h: At global scope:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:28:26: error: ‘::atan’ has not been declared
28 | VECTORIZED_MATH_1(atan,::atan)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:90:34: note: in definition of macro ‘VECTORIZED_MATH_1’
90 | inline sugar::Vectorized<__SYMBOL__,true,NumericVector> \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:28:26: note: suggested alternatives:
28 | VECTORIZED_MATH_1(atan,::atan)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:90:34: note: in definition of macro ‘VECTORIZED_MATH_1’
90 | inline sugar::Vectorized<__SYMBOL__,true,NumericVector> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:2293:5: note: ‘std::atan’
2293 | atan(const std::complex<_Tp>& __z)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:28:19: note: ‘Rcpp::atan’
28 | VECTORIZED_MATH_1(atan,::atan)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:87:9: note: in definition of macro ‘VECTORIZED_MATH_1’
87 | __NAME__( const VectorBase<REALSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:28:26: error: ‘::atan’ has not been declared
28 | VECTORIZED_MATH_1(atan,::atan)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:90:34: note: in definition of macro ‘VECTORIZED_MATH_1’
90 | inline sugar::Vectorized<__SYMBOL__,true,NumericVector> \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:28:26: note: suggested alternatives:
28 | VECTORIZED_MATH_1(atan,::atan)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:90:34: note: in definition of macro ‘VECTORIZED_MATH_1’
90 | inline sugar::Vectorized<__SYMBOL__,true,NumericVector> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:2293:5: note: ‘std::atan’
2293 | atan(const std::complex<_Tp>& __z)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:28:19: note: ‘Rcpp::atan’
28 | VECTORIZED_MATH_1(atan,::atan)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:87:9: note: in definition of macro ‘VECTORIZED_MATH_1’
87 | __NAME__( const VectorBase<REALSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:90:63: error: template argument 1 is invalid
90 | inline sugar::Vectorized<__SYMBOL__,true,NumericVector> \
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:28:1: note: in expansion of macro ‘VECTORIZED_MATH_1’
28 | VECTORIZED_MATH_1(atan,::atan)
| ^~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:28:26: error: ‘::atan’ has not been declared
28 | VECTORIZED_MATH_1(atan,::atan)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:93:41: note: in definition of macro ‘VECTORIZED_MATH_1’
93 | inline sugar::Vectorized_INTSXP<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:28:26: note: suggested alternatives:
28 | VECTORIZED_MATH_1(atan,::atan)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:93:41: note: in definition of macro ‘VECTORIZED_MATH_1’
93 | inline sugar::Vectorized_INTSXP<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:2293:5: note: ‘std::atan’
2293 | atan(const std::complex<_Tp>& __z)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:28:19: note: ‘Rcpp::atan’
28 | VECTORIZED_MATH_1(atan,::atan)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:91:9: note: in definition of macro ‘VECTORIZED_MATH_1’
91 | __NAME__( SEXP x){ return __NAME__( NumericVector( x ) ) ; } \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:28:26: error: ‘::atan’ has not been declared
28 | VECTORIZED_MATH_1(atan,::atan)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:93:41: note: in definition of macro ‘VECTORIZED_MATH_1’
93 | inline sugar::Vectorized_INTSXP<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:28:26: note: suggested alternatives:
28 | VECTORIZED_MATH_1(atan,::atan)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:93:41: note: in definition of macro ‘VECTORIZED_MATH_1’
93 | inline sugar::Vectorized_INTSXP<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:2293:5: note: ‘std::atan’
2293 | atan(const std::complex<_Tp>& __z)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:28:19: note: ‘Rcpp::atan’
28 | VECTORIZED_MATH_1(atan,::atan)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:91:9: note: in definition of macro ‘VECTORIZED_MATH_1’
91 | __NAME__( SEXP x){ return __NAME__( NumericVector( x ) ) ; } \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:93:56: error: template argument 1 is invalid
93 | inline sugar::Vectorized_INTSXP<__SYMBOL__,NA,T> \
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:28:1: note: in expansion of macro ‘VECTORIZED_MATH_1’
28 | VECTORIZED_MATH_1(atan,::atan)
| ^~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h: In function ‘int Rcpp::atan(const VectorBase<13, NA_, T>&)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:28:26: error: ‘::atan’ has not been declared
28 | VECTORIZED_MATH_1(atan,::atan)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:95:49: note: in definition of macro ‘VECTORIZED_MATH_1’
95 | return sugar::Vectorized_INTSXP<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:28:26: note: suggested alternatives:
28 | VECTORIZED_MATH_1(atan,::atan)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:95:49: note: in definition of macro ‘VECTORIZED_MATH_1’
95 | return sugar::Vectorized_INTSXP<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:2293:5: note: ‘std::atan’
2293 | atan(const std::complex<_Tp>& __z)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:28:19: note: ‘Rcpp::atan’
28 | VECTORIZED_MATH_1(atan,::atan)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:94:9: note: in definition of macro ‘VECTORIZED_MATH_1’
94 | __NAME__( const VectorBase<INTSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:28:26: error: ‘::atan’ has not been declared
28 | VECTORIZED_MATH_1(atan,::atan)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:95:49: note: in definition of macro ‘VECTORIZED_MATH_1’
95 | return sugar::Vectorized_INTSXP<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:28:26: note: suggested alternatives:
28 | VECTORIZED_MATH_1(atan,::atan)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:95:49: note: in definition of macro ‘VECTORIZED_MATH_1’
95 | return sugar::Vectorized_INTSXP<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:2293:5: note: ‘std::atan’
2293 | atan(const std::complex<_Tp>& __z)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:28:19: note: ‘Rcpp::atan’
28 | VECTORIZED_MATH_1(atan,::atan)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:94:9: note: in definition of macro ‘VECTORIZED_MATH_1’
94 | __NAME__( const VectorBase<INTSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:95:64: error: template argument 1 is invalid
95 | return sugar::Vectorized_INTSXP<__SYMBOL__,NA,T>( t ) ; \
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:28:1: note: in expansion of macro ‘VECTORIZED_MATH_1’
28 | VECTORIZED_MATH_1(atan,::atan)
| ^~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h: At global scope:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:29:26: error: ‘::ceil’ has not been declared; did you mean ‘std::ceil’?
29 | VECTORIZED_MATH_1(ceil,::ceil)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:86:34: note: in definition of macro ‘VECTORIZED_MATH_1’
86 | inline sugar::Vectorized<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:174:5: note: ‘std::ceil’ declared here
174 | ceil(_Tp __x)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:29:26: error: ‘::ceil’ has not been declared; did you mean ‘std::ceil’?
29 | VECTORIZED_MATH_1(ceil,::ceil)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:86:34: note: in definition of macro ‘VECTORIZED_MATH_1’
86 | inline sugar::Vectorized<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:174:5: note: ‘std::ceil’ declared here
174 | ceil(_Tp __x)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:86:49: error: template argument 1 is invalid
86 | inline sugar::Vectorized<__SYMBOL__,NA,T> \
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:29:1: note: in expansion of macro ‘VECTORIZED_MATH_1’
29 | VECTORIZED_MATH_1(ceil,::ceil)
| ^~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h: In function ‘int Rcpp::ceil(const VectorBase<14, NA_, T>&)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:29:26: error: ‘::ceil’ has not been declared
29 | VECTORIZED_MATH_1(ceil,::ceil)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:88:42: note: in definition of macro ‘VECTORIZED_MATH_1’
88 | return sugar::Vectorized<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:29:26: note: suggested alternatives:
29 | VECTORIZED_MATH_1(ceil,::ceil)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:88:42: note: in definition of macro ‘VECTORIZED_MATH_1’
88 | return sugar::Vectorized<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:174:5: note: ‘std::ceil’
174 | ceil(_Tp __x)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:29:19: note: ‘Rcpp::ceil’
29 | VECTORIZED_MATH_1(ceil,::ceil)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:87:9: note: in definition of macro ‘VECTORIZED_MATH_1’
87 | __NAME__( const VectorBase<REALSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:29:26: error: ‘::ceil’ has not been declared
29 | VECTORIZED_MATH_1(ceil,::ceil)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:88:42: note: in definition of macro ‘VECTORIZED_MATH_1’
88 | return sugar::Vectorized<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:29:26: note: suggested alternatives:
29 | VECTORIZED_MATH_1(ceil,::ceil)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:88:42: note: in definition of macro ‘VECTORIZED_MATH_1’
88 | return sugar::Vectorized<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:174:5: note: ‘std::ceil’
174 | ceil(_Tp __x)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:29:19: note: ‘Rcpp::ceil’
29 | VECTORIZED_MATH_1(ceil,::ceil)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:87:9: note: in definition of macro ‘VECTORIZED_MATH_1’
87 | __NAME__( const VectorBase<REALSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:88:57: error: template argument 1 is invalid
88 | return sugar::Vectorized<__SYMBOL__,NA,T>( t ) ; \
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:29:1: note: in expansion of macro ‘VECTORIZED_MATH_1’
29 | VECTORIZED_MATH_1(ceil,::ceil)
| ^~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h: At global scope:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:29:26: error: ‘::ceil’ has not been declared
29 | VECTORIZED_MATH_1(ceil,::ceil)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:90:34: note: in definition of macro ‘VECTORIZED_MATH_1’
90 | inline sugar::Vectorized<__SYMBOL__,true,NumericVector> \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:29:26: note: suggested alternatives:
29 | VECTORIZED_MATH_1(ceil,::ceil)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:90:34: note: in definition of macro ‘VECTORIZED_MATH_1’
90 | inline sugar::Vectorized<__SYMBOL__,true,NumericVector> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:174:5: note: ‘std::ceil’
174 | ceil(_Tp __x)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:29:19: note: ‘Rcpp::ceil’
29 | VECTORIZED_MATH_1(ceil,::ceil)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:87:9: note: in definition of macro ‘VECTORIZED_MATH_1’
87 | __NAME__( const VectorBase<REALSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:29:26: error: ‘::ceil’ has not been declared
29 | VECTORIZED_MATH_1(ceil,::ceil)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:90:34: note: in definition of macro ‘VECTORIZED_MATH_1’
90 | inline sugar::Vectorized<__SYMBOL__,true,NumericVector> \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:29:26: note: suggested alternatives:
29 | VECTORIZED_MATH_1(ceil,::ceil)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:90:34: note: in definition of macro ‘VECTORIZED_MATH_1’
90 | inline sugar::Vectorized<__SYMBOL__,true,NumericVector> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:174:5: note: ‘std::ceil’
174 | ceil(_Tp __x)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:29:19: note: ‘Rcpp::ceil’
29 | VECTORIZED_MATH_1(ceil,::ceil)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:87:9: note: in definition of macro ‘VECTORIZED_MATH_1’
87 | __NAME__( const VectorBase<REALSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:90:63: error: template argument 1 is invalid
90 | inline sugar::Vectorized<__SYMBOL__,true,NumericVector> \
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:29:1: note: in expansion of macro ‘VECTORIZED_MATH_1’
29 | VECTORIZED_MATH_1(ceil,::ceil)
| ^~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:29:26: error: ‘::ceil’ has not been declared
29 | VECTORIZED_MATH_1(ceil,::ceil)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:93:41: note: in definition of macro ‘VECTORIZED_MATH_1’
93 | inline sugar::Vectorized_INTSXP<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:29:26: note: suggested alternatives:
29 | VECTORIZED_MATH_1(ceil,::ceil)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:93:41: note: in definition of macro ‘VECTORIZED_MATH_1’
93 | inline sugar::Vectorized_INTSXP<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:174:5: note: ‘std::ceil’
174 | ceil(_Tp __x)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:29:19: note: ‘Rcpp::ceil’
29 | VECTORIZED_MATH_1(ceil,::ceil)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:91:9: note: in definition of macro ‘VECTORIZED_MATH_1’
91 | __NAME__( SEXP x){ return __NAME__( NumericVector( x ) ) ; } \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:29:26: error: ‘::ceil’ has not been declared
29 | VECTORIZED_MATH_1(ceil,::ceil)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:93:41: note: in definition of macro ‘VECTORIZED_MATH_1’
93 | inline sugar::Vectorized_INTSXP<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:29:26: note: suggested alternatives:
29 | VECTORIZED_MATH_1(ceil,::ceil)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:93:41: note: in definition of macro ‘VECTORIZED_MATH_1’
93 | inline sugar::Vectorized_INTSXP<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:174:5: note: ‘std::ceil’
174 | ceil(_Tp __x)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:29:19: note: ‘Rcpp::ceil’
29 | VECTORIZED_MATH_1(ceil,::ceil)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:91:9: note: in definition of macro ‘VECTORIZED_MATH_1’
91 | __NAME__( SEXP x){ return __NAME__( NumericVector( x ) ) ; } \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:93:56: error: template argument 1 is invalid
93 | inline sugar::Vectorized_INTSXP<__SYMBOL__,NA,T> \
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:29:1: note: in expansion of macro ‘VECTORIZED_MATH_1’
29 | VECTORIZED_MATH_1(ceil,::ceil)
| ^~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h: In function ‘int Rcpp::ceil(const VectorBase<13, NA_, T>&)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:29:26: error: ‘::ceil’ has not been declared
29 | VECTORIZED_MATH_1(ceil,::ceil)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:95:49: note: in definition of macro ‘VECTORIZED_MATH_1’
95 | return sugar::Vectorized_INTSXP<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:29:26: note: suggested alternatives:
29 | VECTORIZED_MATH_1(ceil,::ceil)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:95:49: note: in definition of macro ‘VECTORIZED_MATH_1’
95 | return sugar::Vectorized_INTSXP<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:174:5: note: ‘std::ceil’
174 | ceil(_Tp __x)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:29:19: note: ‘Rcpp::ceil’
29 | VECTORIZED_MATH_1(ceil,::ceil)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:94:9: note: in definition of macro ‘VECTORIZED_MATH_1’
94 | __NAME__( const VectorBase<INTSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:29:26: error: ‘::ceil’ has not been declared
29 | VECTORIZED_MATH_1(ceil,::ceil)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:95:49: note: in definition of macro ‘VECTORIZED_MATH_1’
95 | return sugar::Vectorized_INTSXP<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:29:26: note: suggested alternatives:
29 | VECTORIZED_MATH_1(ceil,::ceil)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:95:49: note: in definition of macro ‘VECTORIZED_MATH_1’
95 | return sugar::Vectorized_INTSXP<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:174:5: note: ‘std::ceil’
174 | ceil(_Tp __x)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:29:19: note: ‘Rcpp::ceil’
29 | VECTORIZED_MATH_1(ceil,::ceil)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:94:9: note: in definition of macro ‘VECTORIZED_MATH_1’
94 | __NAME__( const VectorBase<INTSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:95:64: error: template argument 1 is invalid
95 | return sugar::Vectorized_INTSXP<__SYMBOL__,NA,T>( t ) ; \
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:29:1: note: in expansion of macro ‘VECTORIZED_MATH_1’
29 | VECTORIZED_MATH_1(ceil,::ceil)
| ^~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h: At global scope:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:30:29: error: ‘::ceil’ has not been declared
30 | VECTORIZED_MATH_1(ceiling,::ceil)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:86:34: note: in definition of macro ‘VECTORIZED_MATH_1’
86 | inline sugar::Vectorized<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:30:29: note: suggested alternatives:
30 | VECTORIZED_MATH_1(ceiling,::ceil)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:86:34: note: in definition of macro ‘VECTORIZED_MATH_1’
86 | inline sugar::Vectorized<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:174:5: note: ‘std::ceil’
174 | ceil(_Tp __x)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:29:19: note: ‘Rcpp::ceil’
29 | VECTORIZED_MATH_1(ceil,::ceil)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:94:9: note: in definition of macro ‘VECTORIZED_MATH_1’
94 | __NAME__( const VectorBase<INTSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:30:29: error: ‘::ceil’ has not been declared
30 | VECTORIZED_MATH_1(ceiling,::ceil)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:86:34: note: in definition of macro ‘VECTORIZED_MATH_1’
86 | inline sugar::Vectorized<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:30:29: note: suggested alternatives:
30 | VECTORIZED_MATH_1(ceiling,::ceil)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:86:34: note: in definition of macro ‘VECTORIZED_MATH_1’
86 | inline sugar::Vectorized<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:174:5: note: ‘std::ceil’
174 | ceil(_Tp __x)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:29:19: note: ‘Rcpp::ceil’
29 | VECTORIZED_MATH_1(ceil,::ceil)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:94:9: note: in definition of macro ‘VECTORIZED_MATH_1’
94 | __NAME__( const VectorBase<INTSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:86:49: error: template argument 1 is invalid
86 | inline sugar::Vectorized<__SYMBOL__,NA,T> \
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:30:1: note: in expansion of macro ‘VECTORIZED_MATH_1’
30 | VECTORIZED_MATH_1(ceiling,::ceil)
| ^~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h: In function ‘int Rcpp::ceiling(const VectorBase<14, NA_, T>&)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:30:29: error: ‘::ceil’ has not been declared
30 | VECTORIZED_MATH_1(ceiling,::ceil)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:88:42: note: in definition of macro ‘VECTORIZED_MATH_1’
88 | return sugar::Vectorized<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:30:29: note: suggested alternatives:
30 | VECTORIZED_MATH_1(ceiling,::ceil)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:88:42: note: in definition of macro ‘VECTORIZED_MATH_1’
88 | return sugar::Vectorized<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:174:5: note: ‘std::ceil’
174 | ceil(_Tp __x)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:29:19: note: ‘Rcpp::ceil’
29 | VECTORIZED_MATH_1(ceil,::ceil)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:94:9: note: in definition of macro ‘VECTORIZED_MATH_1’
94 | __NAME__( const VectorBase<INTSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:30:29: error: ‘::ceil’ has not been declared
30 | VECTORIZED_MATH_1(ceiling,::ceil)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:88:42: note: in definition of macro ‘VECTORIZED_MATH_1’
88 | return sugar::Vectorized<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:30:29: note: suggested alternatives:
30 | VECTORIZED_MATH_1(ceiling,::ceil)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:88:42: note: in definition of macro ‘VECTORIZED_MATH_1’
88 | return sugar::Vectorized<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:174:5: note: ‘std::ceil’
174 | ceil(_Tp __x)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:29:19: note: ‘Rcpp::ceil’
29 | VECTORIZED_MATH_1(ceil,::ceil)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:94:9: note: in definition of macro ‘VECTORIZED_MATH_1’
94 | __NAME__( const VectorBase<INTSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:88:57: error: template argument 1 is invalid
88 | return sugar::Vectorized<__SYMBOL__,NA,T>( t ) ; \
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:30:1: note: in expansion of macro ‘VECTORIZED_MATH_1’
30 | VECTORIZED_MATH_1(ceiling,::ceil)
| ^~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h: At global scope:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:30:29: error: ‘::ceil’ has not been declared
30 | VECTORIZED_MATH_1(ceiling,::ceil)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:90:34: note: in definition of macro ‘VECTORIZED_MATH_1’
90 | inline sugar::Vectorized<__SYMBOL__,true,NumericVector> \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:30:29: note: suggested alternatives:
30 | VECTORIZED_MATH_1(ceiling,::ceil)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:90:34: note: in definition of macro ‘VECTORIZED_MATH_1’
90 | inline sugar::Vectorized<__SYMBOL__,true,NumericVector> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:174:5: note: ‘std::ceil’
174 | ceil(_Tp __x)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:29:19: note: ‘Rcpp::ceil’
29 | VECTORIZED_MATH_1(ceil,::ceil)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:94:9: note: in definition of macro ‘VECTORIZED_MATH_1’
94 | __NAME__( const VectorBase<INTSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:30:29: error: ‘::ceil’ has not been declared
30 | VECTORIZED_MATH_1(ceiling,::ceil)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:90:34: note: in definition of macro ‘VECTORIZED_MATH_1’
90 | inline sugar::Vectorized<__SYMBOL__,true,NumericVector> \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:30:29: note: suggested alternatives:
30 | VECTORIZED_MATH_1(ceiling,::ceil)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:90:34: note: in definition of macro ‘VECTORIZED_MATH_1’
90 | inline sugar::Vectorized<__SYMBOL__,true,NumericVector> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:174:5: note: ‘std::ceil’
174 | ceil(_Tp __x)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:29:19: note: ‘Rcpp::ceil’
29 | VECTORIZED_MATH_1(ceil,::ceil)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:94:9: note: in definition of macro ‘VECTORIZED_MATH_1’
94 | __NAME__( const VectorBase<INTSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:90:63: error: template argument 1 is invalid
90 | inline sugar::Vectorized<__SYMBOL__,true,NumericVector> \
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:30:1: note: in expansion of macro ‘VECTORIZED_MATH_1’
30 | VECTORIZED_MATH_1(ceiling,::ceil)
| ^~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:30:29: error: ‘::ceil’ has not been declared
30 | VECTORIZED_MATH_1(ceiling,::ceil)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:93:41: note: in definition of macro ‘VECTORIZED_MATH_1’
93 | inline sugar::Vectorized_INTSXP<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:30:29: note: suggested alternatives:
30 | VECTORIZED_MATH_1(ceiling,::ceil)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:93:41: note: in definition of macro ‘VECTORIZED_MATH_1’
93 | inline sugar::Vectorized_INTSXP<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:174:5: note: ‘std::ceil’
174 | ceil(_Tp __x)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:29:19: note: ‘Rcpp::ceil’
29 | VECTORIZED_MATH_1(ceil,::ceil)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:94:9: note: in definition of macro ‘VECTORIZED_MATH_1’
94 | __NAME__( const VectorBase<INTSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:30:29: error: ‘::ceil’ has not been declared
30 | VECTORIZED_MATH_1(ceiling,::ceil)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:93:41: note: in definition of macro ‘VECTORIZED_MATH_1’
93 | inline sugar::Vectorized_INTSXP<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:30:29: note: suggested alternatives:
30 | VECTORIZED_MATH_1(ceiling,::ceil)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:93:41: note: in definition of macro ‘VECTORIZED_MATH_1’
93 | inline sugar::Vectorized_INTSXP<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:174:5: note: ‘std::ceil’
174 | ceil(_Tp __x)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:29:19: note: ‘Rcpp::ceil’
29 | VECTORIZED_MATH_1(ceil,::ceil)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:94:9: note: in definition of macro ‘VECTORIZED_MATH_1’
94 | __NAME__( const VectorBase<INTSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:93:56: error: template argument 1 is invalid
93 | inline sugar::Vectorized_INTSXP<__SYMBOL__,NA,T> \
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:30:1: note: in expansion of macro ‘VECTORIZED_MATH_1’
30 | VECTORIZED_MATH_1(ceiling,::ceil)
| ^~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h: In function ‘int Rcpp::ceiling(const VectorBase<13, NA_, T>&)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:30:29: error: ‘::ceil’ has not been declared
30 | VECTORIZED_MATH_1(ceiling,::ceil)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:95:49: note: in definition of macro ‘VECTORIZED_MATH_1’
95 | return sugar::Vectorized_INTSXP<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:30:29: note: suggested alternatives:
30 | VECTORIZED_MATH_1(ceiling,::ceil)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:95:49: note: in definition of macro ‘VECTORIZED_MATH_1’
95 | return sugar::Vectorized_INTSXP<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:174:5: note: ‘std::ceil’
174 | ceil(_Tp __x)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:29:19: note: ‘Rcpp::ceil’
29 | VECTORIZED_MATH_1(ceil,::ceil)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:94:9: note: in definition of macro ‘VECTORIZED_MATH_1’
94 | __NAME__( const VectorBase<INTSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:30:29: error: ‘::ceil’ has not been declared
30 | VECTORIZED_MATH_1(ceiling,::ceil)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:95:49: note: in definition of macro ‘VECTORIZED_MATH_1’
95 | return sugar::Vectorized_INTSXP<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:30:29: note: suggested alternatives:
30 | VECTORIZED_MATH_1(ceiling,::ceil)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:95:49: note: in definition of macro ‘VECTORIZED_MATH_1’
95 | return sugar::Vectorized_INTSXP<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:174:5: note: ‘std::ceil’
174 | ceil(_Tp __x)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:29:19: note: ‘Rcpp::ceil’
29 | VECTORIZED_MATH_1(ceil,::ceil)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:94:9: note: in definition of macro ‘VECTORIZED_MATH_1’
94 | __NAME__( const VectorBase<INTSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:95:64: error: template argument 1 is invalid
95 | return sugar::Vectorized_INTSXP<__SYMBOL__,NA,T>( t ) ; \
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:30:1: note: in expansion of macro ‘VECTORIZED_MATH_1’
30 | VECTORIZED_MATH_1(ceiling,::ceil)
| ^~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h: At global scope:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:31:25: error: ‘::cos’ has not been declared; did you mean ‘std::cos’?
31 | VECTORIZED_MATH_1(cos,::cos)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:86:34: note: in definition of macro ‘VECTORIZED_MATH_1’
86 | inline sugar::Vectorized<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1003:5: note: ‘std::cos’ declared here
1003 | cos(const complex<_Tp>& __z) { return __complex_cos(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:31:25: error: ‘::cos’ has not been declared; did you mean ‘std::cos’?
31 | VECTORIZED_MATH_1(cos,::cos)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:86:34: note: in definition of macro ‘VECTORIZED_MATH_1’
86 | inline sugar::Vectorized<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1003:5: note: ‘std::cos’ declared here
1003 | cos(const complex<_Tp>& __z) { return __complex_cos(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:86:49: error: template argument 1 is invalid
86 | inline sugar::Vectorized<__SYMBOL__,NA,T> \
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:31:1: note: in expansion of macro ‘VECTORIZED_MATH_1’
31 | VECTORIZED_MATH_1(cos,::cos)
| ^~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h: In function ‘int Rcpp::cos(const VectorBase<14, NA_, T>&)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:31:25: error: ‘::cos’ has not been declared
31 | VECTORIZED_MATH_1(cos,::cos)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:88:42: note: in definition of macro ‘VECTORIZED_MATH_1’
88 | return sugar::Vectorized<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:31:25: note: suggested alternatives:
31 | VECTORIZED_MATH_1(cos,::cos)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:88:42: note: in definition of macro ‘VECTORIZED_MATH_1’
88 | return sugar::Vectorized<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1003:5: note: ‘std::cos’
1003 | cos(const complex<_Tp>& __z) { return __complex_cos(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:31:19: note: ‘Rcpp::cos’
31 | VECTORIZED_MATH_1(cos,::cos)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:87:9: note: in definition of macro ‘VECTORIZED_MATH_1’
87 | __NAME__( const VectorBase<REALSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:31:25: error: ‘::cos’ has not been declared
31 | VECTORIZED_MATH_1(cos,::cos)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:88:42: note: in definition of macro ‘VECTORIZED_MATH_1’
88 | return sugar::Vectorized<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:31:25: note: suggested alternatives:
31 | VECTORIZED_MATH_1(cos,::cos)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:88:42: note: in definition of macro ‘VECTORIZED_MATH_1’
88 | return sugar::Vectorized<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1003:5: note: ‘std::cos’
1003 | cos(const complex<_Tp>& __z) { return __complex_cos(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:31:19: note: ‘Rcpp::cos’
31 | VECTORIZED_MATH_1(cos,::cos)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:87:9: note: in definition of macro ‘VECTORIZED_MATH_1’
87 | __NAME__( const VectorBase<REALSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:88:57: error: template argument 1 is invalid
88 | return sugar::Vectorized<__SYMBOL__,NA,T>( t ) ; \
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:31:1: note: in expansion of macro ‘VECTORIZED_MATH_1’
31 | VECTORIZED_MATH_1(cos,::cos)
| ^~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h: At global scope:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:31:25: error: ‘::cos’ has not been declared
31 | VECTORIZED_MATH_1(cos,::cos)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:90:34: note: in definition of macro ‘VECTORIZED_MATH_1’
90 | inline sugar::Vectorized<__SYMBOL__,true,NumericVector> \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:31:25: note: suggested alternatives:
31 | VECTORIZED_MATH_1(cos,::cos)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:90:34: note: in definition of macro ‘VECTORIZED_MATH_1’
90 | inline sugar::Vectorized<__SYMBOL__,true,NumericVector> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1003:5: note: ‘std::cos’
1003 | cos(const complex<_Tp>& __z) { return __complex_cos(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:31:19: note: ‘Rcpp::cos’
31 | VECTORIZED_MATH_1(cos,::cos)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:87:9: note: in definition of macro ‘VECTORIZED_MATH_1’
87 | __NAME__( const VectorBase<REALSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:31:25: error: ‘::cos’ has not been declared
31 | VECTORIZED_MATH_1(cos,::cos)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:90:34: note: in definition of macro ‘VECTORIZED_MATH_1’
90 | inline sugar::Vectorized<__SYMBOL__,true,NumericVector> \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:31:25: note: suggested alternatives:
31 | VECTORIZED_MATH_1(cos,::cos)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:90:34: note: in definition of macro ‘VECTORIZED_MATH_1’
90 | inline sugar::Vectorized<__SYMBOL__,true,NumericVector> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1003:5: note: ‘std::cos’
1003 | cos(const complex<_Tp>& __z) { return __complex_cos(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:31:19: note: ‘Rcpp::cos’
31 | VECTORIZED_MATH_1(cos,::cos)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:87:9: note: in definition of macro ‘VECTORIZED_MATH_1’
87 | __NAME__( const VectorBase<REALSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:90:63: error: template argument 1 is invalid
90 | inline sugar::Vectorized<__SYMBOL__,true,NumericVector> \
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:31:1: note: in expansion of macro ‘VECTORIZED_MATH_1’
31 | VECTORIZED_MATH_1(cos,::cos)
| ^~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:31:25: error: ‘::cos’ has not been declared
31 | VECTORIZED_MATH_1(cos,::cos)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:93:41: note: in definition of macro ‘VECTORIZED_MATH_1’
93 | inline sugar::Vectorized_INTSXP<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:31:25: note: suggested alternatives:
31 | VECTORIZED_MATH_1(cos,::cos)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:93:41: note: in definition of macro ‘VECTORIZED_MATH_1’
93 | inline sugar::Vectorized_INTSXP<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1003:5: note: ‘std::cos’
1003 | cos(const complex<_Tp>& __z) { return __complex_cos(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:31:19: note: ‘Rcpp::cos’
31 | VECTORIZED_MATH_1(cos,::cos)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:91:9: note: in definition of macro ‘VECTORIZED_MATH_1’
91 | __NAME__( SEXP x){ return __NAME__( NumericVector( x ) ) ; } \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:31:25: error: ‘::cos’ has not been declared
31 | VECTORIZED_MATH_1(cos,::cos)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:93:41: note: in definition of macro ‘VECTORIZED_MATH_1’
93 | inline sugar::Vectorized_INTSXP<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:31:25: note: suggested alternatives:
31 | VECTORIZED_MATH_1(cos,::cos)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:93:41: note: in definition of macro ‘VECTORIZED_MATH_1’
93 | inline sugar::Vectorized_INTSXP<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1003:5: note: ‘std::cos’
1003 | cos(const complex<_Tp>& __z) { return __complex_cos(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:31:19: note: ‘Rcpp::cos’
31 | VECTORIZED_MATH_1(cos,::cos)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:91:9: note: in definition of macro ‘VECTORIZED_MATH_1’
91 | __NAME__( SEXP x){ return __NAME__( NumericVector( x ) ) ; } \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:93:56: error: template argument 1 is invalid
93 | inline sugar::Vectorized_INTSXP<__SYMBOL__,NA,T> \
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:31:1: note: in expansion of macro ‘VECTORIZED_MATH_1’
31 | VECTORIZED_MATH_1(cos,::cos)
| ^~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h: In function ‘int Rcpp::cos(const VectorBase<13, NA_, T>&)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:31:25: error: ‘::cos’ has not been declared
31 | VECTORIZED_MATH_1(cos,::cos)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:95:49: note: in definition of macro ‘VECTORIZED_MATH_1’
95 | return sugar::Vectorized_INTSXP<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:31:25: note: suggested alternatives:
31 | VECTORIZED_MATH_1(cos,::cos)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:95:49: note: in definition of macro ‘VECTORIZED_MATH_1’
95 | return sugar::Vectorized_INTSXP<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1003:5: note: ‘std::cos’
1003 | cos(const complex<_Tp>& __z) { return __complex_cos(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:31:19: note: ‘Rcpp::cos’
31 | VECTORIZED_MATH_1(cos,::cos)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:94:9: note: in definition of macro ‘VECTORIZED_MATH_1’
94 | __NAME__( const VectorBase<INTSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:31:25: error: ‘::cos’ has not been declared
31 | VECTORIZED_MATH_1(cos,::cos)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:95:49: note: in definition of macro ‘VECTORIZED_MATH_1’
95 | return sugar::Vectorized_INTSXP<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:31:25: note: suggested alternatives:
31 | VECTORIZED_MATH_1(cos,::cos)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:95:49: note: in definition of macro ‘VECTORIZED_MATH_1’
95 | return sugar::Vectorized_INTSXP<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1003:5: note: ‘std::cos’
1003 | cos(const complex<_Tp>& __z) { return __complex_cos(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:31:19: note: ‘Rcpp::cos’
31 | VECTORIZED_MATH_1(cos,::cos)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:94:9: note: in definition of macro ‘VECTORIZED_MATH_1’
94 | __NAME__( const VectorBase<INTSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:95:64: error: template argument 1 is invalid
95 | return sugar::Vectorized_INTSXP<__SYMBOL__,NA,T>( t ) ; \
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:31:1: note: in expansion of macro ‘VECTORIZED_MATH_1’
31 | VECTORIZED_MATH_1(cos,::cos)
| ^~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h: At global scope:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:32:26: error: ‘::cosh’ has not been declared; did you mean ‘std::cosh’?
32 | VECTORIZED_MATH_1(cosh,::cosh)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:86:34: note: in definition of macro ‘VECTORIZED_MATH_1’
86 | inline sugar::Vectorized<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1033:5: note: ‘std::cosh’ declared here
1033 | cosh(const complex<_Tp>& __z) { return __complex_cosh(__z.__rep()); }
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:32:26: error: ‘::cosh’ has not been declared; did you mean ‘std::cosh’?
32 | VECTORIZED_MATH_1(cosh,::cosh)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:86:34: note: in definition of macro ‘VECTORIZED_MATH_1’
86 | inline sugar::Vectorized<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1033:5: note: ‘std::cosh’ declared here
1033 | cosh(const complex<_Tp>& __z) { return __complex_cosh(__z.__rep()); }
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:86:49: error: template argument 1 is invalid
86 | inline sugar::Vectorized<__SYMBOL__,NA,T> \
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:32:1: note: in expansion of macro ‘VECTORIZED_MATH_1’
32 | VECTORIZED_MATH_1(cosh,::cosh)
| ^~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h: In function ‘int Rcpp::cosh(const VectorBase<14, NA_, T>&)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:32:26: error: ‘::cosh’ has not been declared
32 | VECTORIZED_MATH_1(cosh,::cosh)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:88:42: note: in definition of macro ‘VECTORIZED_MATH_1’
88 | return sugar::Vectorized<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:32:26: note: suggested alternatives:
32 | VECTORIZED_MATH_1(cosh,::cosh)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:88:42: note: in definition of macro ‘VECTORIZED_MATH_1’
88 | return sugar::Vectorized<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1033:5: note: ‘std::cosh’
1033 | cosh(const complex<_Tp>& __z) { return __complex_cosh(__z.__rep()); }
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:32:19: note: ‘Rcpp::cosh’
32 | VECTORIZED_MATH_1(cosh,::cosh)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:87:9: note: in definition of macro ‘VECTORIZED_MATH_1’
87 | __NAME__( const VectorBase<REALSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:32:26: error: ‘::cosh’ has not been declared
32 | VECTORIZED_MATH_1(cosh,::cosh)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:88:42: note: in definition of macro ‘VECTORIZED_MATH_1’
88 | return sugar::Vectorized<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:32:26: note: suggested alternatives:
32 | VECTORIZED_MATH_1(cosh,::cosh)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:88:42: note: in definition of macro ‘VECTORIZED_MATH_1’
88 | return sugar::Vectorized<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1033:5: note: ‘std::cosh’
1033 | cosh(const complex<_Tp>& __z) { return __complex_cosh(__z.__rep()); }
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:32:19: note: ‘Rcpp::cosh’
32 | VECTORIZED_MATH_1(cosh,::cosh)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:87:9: note: in definition of macro ‘VECTORIZED_MATH_1’
87 | __NAME__( const VectorBase<REALSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:88:57: error: template argument 1 is invalid
88 | return sugar::Vectorized<__SYMBOL__,NA,T>( t ) ; \
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:32:1: note: in expansion of macro ‘VECTORIZED_MATH_1’
32 | VECTORIZED_MATH_1(cosh,::cosh)
| ^~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h: At global scope:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:32:26: error: ‘::cosh’ has not been declared
32 | VECTORIZED_MATH_1(cosh,::cosh)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:90:34: note: in definition of macro ‘VECTORIZED_MATH_1’
90 | inline sugar::Vectorized<__SYMBOL__,true,NumericVector> \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:32:26: note: suggested alternatives:
32 | VECTORIZED_MATH_1(cosh,::cosh)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:90:34: note: in definition of macro ‘VECTORIZED_MATH_1’
90 | inline sugar::Vectorized<__SYMBOL__,true,NumericVector> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1033:5: note: ‘std::cosh’
1033 | cosh(const complex<_Tp>& __z) { return __complex_cosh(__z.__rep()); }
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:32:19: note: ‘Rcpp::cosh’
32 | VECTORIZED_MATH_1(cosh,::cosh)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:87:9: note: in definition of macro ‘VECTORIZED_MATH_1’
87 | __NAME__( const VectorBase<REALSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:32:26: error: ‘::cosh’ has not been declared
32 | VECTORIZED_MATH_1(cosh,::cosh)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:90:34: note: in definition of macro ‘VECTORIZED_MATH_1’
90 | inline sugar::Vectorized<__SYMBOL__,true,NumericVector> \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:32:26: note: suggested alternatives:
32 | VECTORIZED_MATH_1(cosh,::cosh)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:90:34: note: in definition of macro ‘VECTORIZED_MATH_1’
90 | inline sugar::Vectorized<__SYMBOL__,true,NumericVector> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1033:5: note: ‘std::cosh’
1033 | cosh(const complex<_Tp>& __z) { return __complex_cosh(__z.__rep()); }
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:32:19: note: ‘Rcpp::cosh’
32 | VECTORIZED_MATH_1(cosh,::cosh)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:87:9: note: in definition of macro ‘VECTORIZED_MATH_1’
87 | __NAME__( const VectorBase<REALSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:90:63: error: template argument 1 is invalid
90 | inline sugar::Vectorized<__SYMBOL__,true,NumericVector> \
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:32:1: note: in expansion of macro ‘VECTORIZED_MATH_1’
32 | VECTORIZED_MATH_1(cosh,::cosh)
| ^~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:32:26: error: ‘::cosh’ has not been declared
32 | VECTORIZED_MATH_1(cosh,::cosh)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:93:41: note: in definition of macro ‘VECTORIZED_MATH_1’
93 | inline sugar::Vectorized_INTSXP<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:32:26: note: suggested alternatives:
32 | VECTORIZED_MATH_1(cosh,::cosh)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:93:41: note: in definition of macro ‘VECTORIZED_MATH_1’
93 | inline sugar::Vectorized_INTSXP<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1033:5: note: ‘std::cosh’
1033 | cosh(const complex<_Tp>& __z) { return __complex_cosh(__z.__rep()); }
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:32:19: note: ‘Rcpp::cosh’
32 | VECTORIZED_MATH_1(cosh,::cosh)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:91:9: note: in definition of macro ‘VECTORIZED_MATH_1’
91 | __NAME__( SEXP x){ return __NAME__( NumericVector( x ) ) ; } \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:32:26: error: ‘::cosh’ has not been declared
32 | VECTORIZED_MATH_1(cosh,::cosh)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:93:41: note: in definition of macro ‘VECTORIZED_MATH_1’
93 | inline sugar::Vectorized_INTSXP<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:32:26: note: suggested alternatives:
32 | VECTORIZED_MATH_1(cosh,::cosh)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:93:41: note: in definition of macro ‘VECTORIZED_MATH_1’
93 | inline sugar::Vectorized_INTSXP<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1033:5: note: ‘std::cosh’
1033 | cosh(const complex<_Tp>& __z) { return __complex_cosh(__z.__rep()); }
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:32:19: note: ‘Rcpp::cosh’
32 | VECTORIZED_MATH_1(cosh,::cosh)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:91:9: note: in definition of macro ‘VECTORIZED_MATH_1’
91 | __NAME__( SEXP x){ return __NAME__( NumericVector( x ) ) ; } \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:93:56: error: template argument 1 is invalid
93 | inline sugar::Vectorized_INTSXP<__SYMBOL__,NA,T> \
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:32:1: note: in expansion of macro ‘VECTORIZED_MATH_1’
32 | VECTORIZED_MATH_1(cosh,::cosh)
| ^~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h: In function ‘int Rcpp::cosh(const VectorBase<13, NA_, T>&)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:32:26: error: ‘::cosh’ has not been declared
32 | VECTORIZED_MATH_1(cosh,::cosh)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:95:49: note: in definition of macro ‘VECTORIZED_MATH_1’
95 | return sugar::Vectorized_INTSXP<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:32:26: note: suggested alternatives:
32 | VECTORIZED_MATH_1(cosh,::cosh)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:95:49: note: in definition of macro ‘VECTORIZED_MATH_1’
95 | return sugar::Vectorized_INTSXP<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1033:5: note: ‘std::cosh’
1033 | cosh(const complex<_Tp>& __z) { return __complex_cosh(__z.__rep()); }
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:32:19: note: ‘Rcpp::cosh’
32 | VECTORIZED_MATH_1(cosh,::cosh)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:94:9: note: in definition of macro ‘VECTORIZED_MATH_1’
94 | __NAME__( const VectorBase<INTSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:32:26: error: ‘::cosh’ has not been declared
32 | VECTORIZED_MATH_1(cosh,::cosh)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:95:49: note: in definition of macro ‘VECTORIZED_MATH_1’
95 | return sugar::Vectorized_INTSXP<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:32:26: note: suggested alternatives:
32 | VECTORIZED_MATH_1(cosh,::cosh)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:95:49: note: in definition of macro ‘VECTORIZED_MATH_1’
95 | return sugar::Vectorized_INTSXP<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1033:5: note: ‘std::cosh’
1033 | cosh(const complex<_Tp>& __z) { return __complex_cosh(__z.__rep()); }
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:32:19: note: ‘Rcpp::cosh’
32 | VECTORIZED_MATH_1(cosh,::cosh)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:94:9: note: in definition of macro ‘VECTORIZED_MATH_1’
94 | __NAME__( const VectorBase<INTSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:95:64: error: template argument 1 is invalid
95 | return sugar::Vectorized_INTSXP<__SYMBOL__,NA,T>( t ) ; \
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:32:1: note: in expansion of macro ‘VECTORIZED_MATH_1’
32 | VECTORIZED_MATH_1(cosh,::cosh)
| ^~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h: At global scope:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:33:27: error: ‘::floor’ has not been declared; did you mean ‘std::floor’?
33 | VECTORIZED_MATH_1(floor,::floor)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:86:34: note: in definition of macro ‘VECTORIZED_MATH_1’
86 | inline sugar::Vectorized<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:269:5: note: ‘std::floor’ declared here
269 | floor(_Tp __x)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:33:27: error: ‘::floor’ has not been declared; did you mean ‘std::floor’?
33 | VECTORIZED_MATH_1(floor,::floor)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:86:34: note: in definition of macro ‘VECTORIZED_MATH_1’
86 | inline sugar::Vectorized<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:269:5: note: ‘std::floor’ declared here
269 | floor(_Tp __x)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:86:49: error: template argument 1 is invalid
86 | inline sugar::Vectorized<__SYMBOL__,NA,T> \
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:33:1: note: in expansion of macro ‘VECTORIZED_MATH_1’
33 | VECTORIZED_MATH_1(floor,::floor)
| ^~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h: In function ‘int Rcpp::floor(const VectorBase<14, NA_, T>&)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:33:27: error: ‘::floor’ has not been declared
33 | VECTORIZED_MATH_1(floor,::floor)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:88:42: note: in definition of macro ‘VECTORIZED_MATH_1’
88 | return sugar::Vectorized<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:33:27: note: suggested alternatives:
33 | VECTORIZED_MATH_1(floor,::floor)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:88:42: note: in definition of macro ‘VECTORIZED_MATH_1’
88 | return sugar::Vectorized<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:269:5: note: ‘std::floor’
269 | floor(_Tp __x)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:33:19: note: ‘Rcpp::floor’
33 | VECTORIZED_MATH_1(floor,::floor)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:87:9: note: in definition of macro ‘VECTORIZED_MATH_1’
87 | __NAME__( const VectorBase<REALSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:33:27: error: ‘::floor’ has not been declared
33 | VECTORIZED_MATH_1(floor,::floor)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:88:42: note: in definition of macro ‘VECTORIZED_MATH_1’
88 | return sugar::Vectorized<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:33:27: note: suggested alternatives:
33 | VECTORIZED_MATH_1(floor,::floor)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:88:42: note: in definition of macro ‘VECTORIZED_MATH_1’
88 | return sugar::Vectorized<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:269:5: note: ‘std::floor’
269 | floor(_Tp __x)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:33:19: note: ‘Rcpp::floor’
33 | VECTORIZED_MATH_1(floor,::floor)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:87:9: note: in definition of macro ‘VECTORIZED_MATH_1’
87 | __NAME__( const VectorBase<REALSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:88:57: error: template argument 1 is invalid
88 | return sugar::Vectorized<__SYMBOL__,NA,T>( t ) ; \
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:33:1: note: in expansion of macro ‘VECTORIZED_MATH_1’
33 | VECTORIZED_MATH_1(floor,::floor)
| ^~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h: At global scope:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:33:27: error: ‘::floor’ has not been declared
33 | VECTORIZED_MATH_1(floor,::floor)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:90:34: note: in definition of macro ‘VECTORIZED_MATH_1’
90 | inline sugar::Vectorized<__SYMBOL__,true,NumericVector> \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:33:27: note: suggested alternatives:
33 | VECTORIZED_MATH_1(floor,::floor)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:90:34: note: in definition of macro ‘VECTORIZED_MATH_1’
90 | inline sugar::Vectorized<__SYMBOL__,true,NumericVector> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:269:5: note: ‘std::floor’
269 | floor(_Tp __x)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:33:19: note: ‘Rcpp::floor’
33 | VECTORIZED_MATH_1(floor,::floor)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:87:9: note: in definition of macro ‘VECTORIZED_MATH_1’
87 | __NAME__( const VectorBase<REALSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:33:27: error: ‘::floor’ has not been declared
33 | VECTORIZED_MATH_1(floor,::floor)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:90:34: note: in definition of macro ‘VECTORIZED_MATH_1’
90 | inline sugar::Vectorized<__SYMBOL__,true,NumericVector> \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:33:27: note: suggested alternatives:
33 | VECTORIZED_MATH_1(floor,::floor)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:90:34: note: in definition of macro ‘VECTORIZED_MATH_1’
90 | inline sugar::Vectorized<__SYMBOL__,true,NumericVector> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:269:5: note: ‘std::floor’
269 | floor(_Tp __x)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:33:19: note: ‘Rcpp::floor’
33 | VECTORIZED_MATH_1(floor,::floor)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:87:9: note: in definition of macro ‘VECTORIZED_MATH_1’
87 | __NAME__( const VectorBase<REALSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:90:63: error: template argument 1 is invalid
90 | inline sugar::Vectorized<__SYMBOL__,true,NumericVector> \
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:33:1: note: in expansion of macro ‘VECTORIZED_MATH_1’
33 | VECTORIZED_MATH_1(floor,::floor)
| ^~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:33:27: error: ‘::floor’ has not been declared
33 | VECTORIZED_MATH_1(floor,::floor)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:93:41: note: in definition of macro ‘VECTORIZED_MATH_1’
93 | inline sugar::Vectorized_INTSXP<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:33:27: note: suggested alternatives:
33 | VECTORIZED_MATH_1(floor,::floor)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:93:41: note: in definition of macro ‘VECTORIZED_MATH_1’
93 | inline sugar::Vectorized_INTSXP<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:269:5: note: ‘std::floor’
269 | floor(_Tp __x)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:33:19: note: ‘Rcpp::floor’
33 | VECTORIZED_MATH_1(floor,::floor)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:91:9: note: in definition of macro ‘VECTORIZED_MATH_1’
91 | __NAME__( SEXP x){ return __NAME__( NumericVector( x ) ) ; } \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:33:27: error: ‘::floor’ has not been declared
33 | VECTORIZED_MATH_1(floor,::floor)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:93:41: note: in definition of macro ‘VECTORIZED_MATH_1’
93 | inline sugar::Vectorized_INTSXP<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:33:27: note: suggested alternatives:
33 | VECTORIZED_MATH_1(floor,::floor)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:93:41: note: in definition of macro ‘VECTORIZED_MATH_1’
93 | inline sugar::Vectorized_INTSXP<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:269:5: note: ‘std::floor’
269 | floor(_Tp __x)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:33:19: note: ‘Rcpp::floor’
33 | VECTORIZED_MATH_1(floor,::floor)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:91:9: note: in definition of macro ‘VECTORIZED_MATH_1’
91 | __NAME__( SEXP x){ return __NAME__( NumericVector( x ) ) ; } \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:93:56: error: template argument 1 is invalid
93 | inline sugar::Vectorized_INTSXP<__SYMBOL__,NA,T> \
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:33:1: note: in expansion of macro ‘VECTORIZED_MATH_1’
33 | VECTORIZED_MATH_1(floor,::floor)
| ^~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h: In function ‘int Rcpp::floor(const VectorBase<13, NA_, T>&)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:33:27: error: ‘::floor’ has not been declared
33 | VECTORIZED_MATH_1(floor,::floor)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:95:49: note: in definition of macro ‘VECTORIZED_MATH_1’
95 | return sugar::Vectorized_INTSXP<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:33:27: note: suggested alternatives:
33 | VECTORIZED_MATH_1(floor,::floor)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:95:49: note: in definition of macro ‘VECTORIZED_MATH_1’
95 | return sugar::Vectorized_INTSXP<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:269:5: note: ‘std::floor’
269 | floor(_Tp __x)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:33:19: note: ‘Rcpp::floor’
33 | VECTORIZED_MATH_1(floor,::floor)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:94:9: note: in definition of macro ‘VECTORIZED_MATH_1’
94 | __NAME__( const VectorBase<INTSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:33:27: error: ‘::floor’ has not been declared
33 | VECTORIZED_MATH_1(floor,::floor)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:95:49: note: in definition of macro ‘VECTORIZED_MATH_1’
95 | return sugar::Vectorized_INTSXP<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:33:27: note: suggested alternatives:
33 | VECTORIZED_MATH_1(floor,::floor)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:95:49: note: in definition of macro ‘VECTORIZED_MATH_1’
95 | return sugar::Vectorized_INTSXP<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:269:5: note: ‘std::floor’
269 | floor(_Tp __x)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:33:19: note: ‘Rcpp::floor’
33 | VECTORIZED_MATH_1(floor,::floor)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:94:9: note: in definition of macro ‘VECTORIZED_MATH_1’
94 | __NAME__( const VectorBase<INTSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:95:64: error: template argument 1 is invalid
95 | return sugar::Vectorized_INTSXP<__SYMBOL__,NA,T>( t ) ; \
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:33:1: note: in expansion of macro ‘VECTORIZED_MATH_1’
33 | VECTORIZED_MATH_1(floor,::floor)
| ^~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h: At global scope:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:34:25: error: ‘::log’ has not been declared; did you mean ‘std::log’?
34 | VECTORIZED_MATH_1(log,::log)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:86:34: note: in definition of macro ‘VECTORIZED_MATH_1’
86 | inline sugar::Vectorized<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1086:5: note: ‘std::log’ declared here
1086 | log(const complex<_Tp>& __z) { return __complex_log(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:34:25: error: ‘::log’ has not been declared; did you mean ‘std::log’?
34 | VECTORIZED_MATH_1(log,::log)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:86:34: note: in definition of macro ‘VECTORIZED_MATH_1’
86 | inline sugar::Vectorized<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1086:5: note: ‘std::log’ declared here
1086 | log(const complex<_Tp>& __z) { return __complex_log(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:86:49: error: template argument 1 is invalid
86 | inline sugar::Vectorized<__SYMBOL__,NA,T> \
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:34:1: note: in expansion of macro ‘VECTORIZED_MATH_1’
34 | VECTORIZED_MATH_1(log,::log)
| ^~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h: In function ‘int Rcpp::log(const VectorBase<14, NA_, T>&)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:34:25: error: ‘::log’ has not been declared
34 | VECTORIZED_MATH_1(log,::log)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:88:42: note: in definition of macro ‘VECTORIZED_MATH_1’
88 | return sugar::Vectorized<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:34:25: note: suggested alternatives:
34 | VECTORIZED_MATH_1(log,::log)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:88:42: note: in definition of macro ‘VECTORIZED_MATH_1’
88 | return sugar::Vectorized<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1086:5: note: ‘std::log’
1086 | log(const complex<_Tp>& __z) { return __complex_log(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:34:19: note: ‘Rcpp::log’
34 | VECTORIZED_MATH_1(log,::log)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:87:9: note: in definition of macro ‘VECTORIZED_MATH_1’
87 | __NAME__( const VectorBase<REALSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:34:25: error: ‘::log’ has not been declared
34 | VECTORIZED_MATH_1(log,::log)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:88:42: note: in definition of macro ‘VECTORIZED_MATH_1’
88 | return sugar::Vectorized<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:34:25: note: suggested alternatives:
34 | VECTORIZED_MATH_1(log,::log)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:88:42: note: in definition of macro ‘VECTORIZED_MATH_1’
88 | return sugar::Vectorized<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1086:5: note: ‘std::log’
1086 | log(const complex<_Tp>& __z) { return __complex_log(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:34:19: note: ‘Rcpp::log’
34 | VECTORIZED_MATH_1(log,::log)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:87:9: note: in definition of macro ‘VECTORIZED_MATH_1’
87 | __NAME__( const VectorBase<REALSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:88:57: error: template argument 1 is invalid
88 | return sugar::Vectorized<__SYMBOL__,NA,T>( t ) ; \
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:34:1: note: in expansion of macro ‘VECTORIZED_MATH_1’
34 | VECTORIZED_MATH_1(log,::log)
| ^~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h: At global scope:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:34:25: error: ‘::log’ has not been declared
34 | VECTORIZED_MATH_1(log,::log)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:90:34: note: in definition of macro ‘VECTORIZED_MATH_1’
90 | inline sugar::Vectorized<__SYMBOL__,true,NumericVector> \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:34:25: note: suggested alternatives:
34 | VECTORIZED_MATH_1(log,::log)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:90:34: note: in definition of macro ‘VECTORIZED_MATH_1’
90 | inline sugar::Vectorized<__SYMBOL__,true,NumericVector> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1086:5: note: ‘std::log’
1086 | log(const complex<_Tp>& __z) { return __complex_log(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:34:19: note: ‘Rcpp::log’
34 | VECTORIZED_MATH_1(log,::log)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:87:9: note: in definition of macro ‘VECTORIZED_MATH_1’
87 | __NAME__( const VectorBase<REALSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:34:25: error: ‘::log’ has not been declared
34 | VECTORIZED_MATH_1(log,::log)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:90:34: note: in definition of macro ‘VECTORIZED_MATH_1’
90 | inline sugar::Vectorized<__SYMBOL__,true,NumericVector> \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:34:25: note: suggested alternatives:
34 | VECTORIZED_MATH_1(log,::log)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:90:34: note: in definition of macro ‘VECTORIZED_MATH_1’
90 | inline sugar::Vectorized<__SYMBOL__,true,NumericVector> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1086:5: note: ‘std::log’
1086 | log(const complex<_Tp>& __z) { return __complex_log(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:34:19: note: ‘Rcpp::log’
34 | VECTORIZED_MATH_1(log,::log)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:87:9: note: in definition of macro ‘VECTORIZED_MATH_1’
87 | __NAME__( const VectorBase<REALSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:90:63: error: template argument 1 is invalid
90 | inline sugar::Vectorized<__SYMBOL__,true,NumericVector> \
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:34:1: note: in expansion of macro ‘VECTORIZED_MATH_1’
34 | VECTORIZED_MATH_1(log,::log)
| ^~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:34:25: error: ‘::log’ has not been declared
34 | VECTORIZED_MATH_1(log,::log)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:93:41: note: in definition of macro ‘VECTORIZED_MATH_1’
93 | inline sugar::Vectorized_INTSXP<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:34:25: note: suggested alternatives:
34 | VECTORIZED_MATH_1(log,::log)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:93:41: note: in definition of macro ‘VECTORIZED_MATH_1’
93 | inline sugar::Vectorized_INTSXP<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1086:5: note: ‘std::log’
1086 | log(const complex<_Tp>& __z) { return __complex_log(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:34:19: note: ‘Rcpp::log’
34 | VECTORIZED_MATH_1(log,::log)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:91:9: note: in definition of macro ‘VECTORIZED_MATH_1’
91 | __NAME__( SEXP x){ return __NAME__( NumericVector( x ) ) ; } \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:34:25: error: ‘::log’ has not been declared
34 | VECTORIZED_MATH_1(log,::log)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:93:41: note: in definition of macro ‘VECTORIZED_MATH_1’
93 | inline sugar::Vectorized_INTSXP<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:34:25: note: suggested alternatives:
34 | VECTORIZED_MATH_1(log,::log)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:93:41: note: in definition of macro ‘VECTORIZED_MATH_1’
93 | inline sugar::Vectorized_INTSXP<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1086:5: note: ‘std::log’
1086 | log(const complex<_Tp>& __z) { return __complex_log(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:34:19: note: ‘Rcpp::log’
34 | VECTORIZED_MATH_1(log,::log)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:91:9: note: in definition of macro ‘VECTORIZED_MATH_1’
91 | __NAME__( SEXP x){ return __NAME__( NumericVector( x ) ) ; } \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:93:56: error: template argument 1 is invalid
93 | inline sugar::Vectorized_INTSXP<__SYMBOL__,NA,T> \
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:34:1: note: in expansion of macro ‘VECTORIZED_MATH_1’
34 | VECTORIZED_MATH_1(log,::log)
| ^~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h: In function ‘int Rcpp::log(const VectorBase<13, NA_, T>&)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:34:25: error: ‘::log’ has not been declared
34 | VECTORIZED_MATH_1(log,::log)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:95:49: note: in definition of macro ‘VECTORIZED_MATH_1’
95 | return sugar::Vectorized_INTSXP<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:34:25: note: suggested alternatives:
34 | VECTORIZED_MATH_1(log,::log)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:95:49: note: in definition of macro ‘VECTORIZED_MATH_1’
95 | return sugar::Vectorized_INTSXP<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1086:5: note: ‘std::log’
1086 | log(const complex<_Tp>& __z) { return __complex_log(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:34:19: note: ‘Rcpp::log’
34 | VECTORIZED_MATH_1(log,::log)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:94:9: note: in definition of macro ‘VECTORIZED_MATH_1’
94 | __NAME__( const VectorBase<INTSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:34:25: error: ‘::log’ has not been declared
34 | VECTORIZED_MATH_1(log,::log)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:95:49: note: in definition of macro ‘VECTORIZED_MATH_1’
95 | return sugar::Vectorized_INTSXP<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:34:25: note: suggested alternatives:
34 | VECTORIZED_MATH_1(log,::log)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:95:49: note: in definition of macro ‘VECTORIZED_MATH_1’
95 | return sugar::Vectorized_INTSXP<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1086:5: note: ‘std::log’
1086 | log(const complex<_Tp>& __z) { return __complex_log(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:34:19: note: ‘Rcpp::log’
34 | VECTORIZED_MATH_1(log,::log)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:94:9: note: in definition of macro ‘VECTORIZED_MATH_1’
94 | __NAME__( const VectorBase<INTSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:95:64: error: template argument 1 is invalid
95 | return sugar::Vectorized_INTSXP<__SYMBOL__,NA,T>( t ) ; \
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:34:1: note: in expansion of macro ‘VECTORIZED_MATH_1’
34 | VECTORIZED_MATH_1(log,::log)
| ^~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h: At global scope:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:35:27: error: ‘::log10’ has not been declared; did you mean ‘std::log10’?
35 | VECTORIZED_MATH_1(log10,::log10)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:86:34: note: in definition of macro ‘VECTORIZED_MATH_1’
86 | inline sugar::Vectorized<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1095:5: note: ‘std::log10’ declared here
1095 | log10(const complex<_Tp>& __z)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:35:27: error: ‘::log10’ has not been declared; did you mean ‘std::log10’?
35 | VECTORIZED_MATH_1(log10,::log10)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:86:34: note: in definition of macro ‘VECTORIZED_MATH_1’
86 | inline sugar::Vectorized<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1095:5: note: ‘std::log10’ declared here
1095 | log10(const complex<_Tp>& __z)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:86:49: error: template argument 1 is invalid
86 | inline sugar::Vectorized<__SYMBOL__,NA,T> \
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:35:1: note: in expansion of macro ‘VECTORIZED_MATH_1’
35 | VECTORIZED_MATH_1(log10,::log10)
| ^~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h: In function ‘int Rcpp::log10(const VectorBase<14, NA_, T>&)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:35:27: error: ‘::log10’ has not been declared
35 | VECTORIZED_MATH_1(log10,::log10)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:88:42: note: in definition of macro ‘VECTORIZED_MATH_1’
88 | return sugar::Vectorized<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:35:27: note: suggested alternatives:
35 | VECTORIZED_MATH_1(log10,::log10)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:88:42: note: in definition of macro ‘VECTORIZED_MATH_1’
88 | return sugar::Vectorized<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1095:5: note: ‘std::log10’
1095 | log10(const complex<_Tp>& __z)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:35:19: note: ‘Rcpp::log10’
35 | VECTORIZED_MATH_1(log10,::log10)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:87:9: note: in definition of macro ‘VECTORIZED_MATH_1’
87 | __NAME__( const VectorBase<REALSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:35:27: error: ‘::log10’ has not been declared
35 | VECTORIZED_MATH_1(log10,::log10)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:88:42: note: in definition of macro ‘VECTORIZED_MATH_1’
88 | return sugar::Vectorized<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:35:27: note: suggested alternatives:
35 | VECTORIZED_MATH_1(log10,::log10)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:88:42: note: in definition of macro ‘VECTORIZED_MATH_1’
88 | return sugar::Vectorized<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1095:5: note: ‘std::log10’
1095 | log10(const complex<_Tp>& __z)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:35:19: note: ‘Rcpp::log10’
35 | VECTORIZED_MATH_1(log10,::log10)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:87:9: note: in definition of macro ‘VECTORIZED_MATH_1’
87 | __NAME__( const VectorBase<REALSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:88:57: error: template argument 1 is invalid
88 | return sugar::Vectorized<__SYMBOL__,NA,T>( t ) ; \
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:35:1: note: in expansion of macro ‘VECTORIZED_MATH_1’
35 | VECTORIZED_MATH_1(log10,::log10)
| ^~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h: At global scope:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:35:27: error: ‘::log10’ has not been declared
35 | VECTORIZED_MATH_1(log10,::log10)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:90:34: note: in definition of macro ‘VECTORIZED_MATH_1’
90 | inline sugar::Vectorized<__SYMBOL__,true,NumericVector> \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:35:27: note: suggested alternatives:
35 | VECTORIZED_MATH_1(log10,::log10)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:90:34: note: in definition of macro ‘VECTORIZED_MATH_1’
90 | inline sugar::Vectorized<__SYMBOL__,true,NumericVector> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1095:5: note: ‘std::log10’
1095 | log10(const complex<_Tp>& __z)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:35:19: note: ‘Rcpp::log10’
35 | VECTORIZED_MATH_1(log10,::log10)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:87:9: note: in definition of macro ‘VECTORIZED_MATH_1’
87 | __NAME__( const VectorBase<REALSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:35:27: error: ‘::log10’ has not been declared
35 | VECTORIZED_MATH_1(log10,::log10)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:90:34: note: in definition of macro ‘VECTORIZED_MATH_1’
90 | inline sugar::Vectorized<__SYMBOL__,true,NumericVector> \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:35:27: note: suggested alternatives:
35 | VECTORIZED_MATH_1(log10,::log10)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:90:34: note: in definition of macro ‘VECTORIZED_MATH_1’
90 | inline sugar::Vectorized<__SYMBOL__,true,NumericVector> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1095:5: note: ‘std::log10’
1095 | log10(const complex<_Tp>& __z)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:35:19: note: ‘Rcpp::log10’
35 | VECTORIZED_MATH_1(log10,::log10)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:87:9: note: in definition of macro ‘VECTORIZED_MATH_1’
87 | __NAME__( const VectorBase<REALSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:90:63: error: template argument 1 is invalid
90 | inline sugar::Vectorized<__SYMBOL__,true,NumericVector> \
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:35:1: note: in expansion of macro ‘VECTORIZED_MATH_1’
35 | VECTORIZED_MATH_1(log10,::log10)
| ^~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:35:27: error: ‘::log10’ has not been declared
35 | VECTORIZED_MATH_1(log10,::log10)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:93:41: note: in definition of macro ‘VECTORIZED_MATH_1’
93 | inline sugar::Vectorized_INTSXP<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:35:27: note: suggested alternatives:
35 | VECTORIZED_MATH_1(log10,::log10)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:93:41: note: in definition of macro ‘VECTORIZED_MATH_1’
93 | inline sugar::Vectorized_INTSXP<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1095:5: note: ‘std::log10’
1095 | log10(const complex<_Tp>& __z)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:35:19: note: ‘Rcpp::log10’
35 | VECTORIZED_MATH_1(log10,::log10)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:91:9: note: in definition of macro ‘VECTORIZED_MATH_1’
91 | __NAME__( SEXP x){ return __NAME__( NumericVector( x ) ) ; } \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:35:27: error: ‘::log10’ has not been declared
35 | VECTORIZED_MATH_1(log10,::log10)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:93:41: note: in definition of macro ‘VECTORIZED_MATH_1’
93 | inline sugar::Vectorized_INTSXP<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:35:27: note: suggested alternatives:
35 | VECTORIZED_MATH_1(log10,::log10)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:93:41: note: in definition of macro ‘VECTORIZED_MATH_1’
93 | inline sugar::Vectorized_INTSXP<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1095:5: note: ‘std::log10’
1095 | log10(const complex<_Tp>& __z)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:35:19: note: ‘Rcpp::log10’
35 | VECTORIZED_MATH_1(log10,::log10)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:91:9: note: in definition of macro ‘VECTORIZED_MATH_1’
91 | __NAME__( SEXP x){ return __NAME__( NumericVector( x ) ) ; } \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:93:56: error: template argument 1 is invalid
93 | inline sugar::Vectorized_INTSXP<__SYMBOL__,NA,T> \
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:35:1: note: in expansion of macro ‘VECTORIZED_MATH_1’
35 | VECTORIZED_MATH_1(log10,::log10)
| ^~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h: In function ‘int Rcpp::log10(const VectorBase<13, NA_, T>&)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:35:27: error: ‘::log10’ has not been declared
35 | VECTORIZED_MATH_1(log10,::log10)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:95:49: note: in definition of macro ‘VECTORIZED_MATH_1’
95 | return sugar::Vectorized_INTSXP<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:35:27: note: suggested alternatives:
35 | VECTORIZED_MATH_1(log10,::log10)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:95:49: note: in definition of macro ‘VECTORIZED_MATH_1’
95 | return sugar::Vectorized_INTSXP<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1095:5: note: ‘std::log10’
1095 | log10(const complex<_Tp>& __z)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:35:19: note: ‘Rcpp::log10’
35 | VECTORIZED_MATH_1(log10,::log10)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:94:9: note: in definition of macro ‘VECTORIZED_MATH_1’
94 | __NAME__( const VectorBase<INTSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:35:27: error: ‘::log10’ has not been declared
35 | VECTORIZED_MATH_1(log10,::log10)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:95:49: note: in definition of macro ‘VECTORIZED_MATH_1’
95 | return sugar::Vectorized_INTSXP<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:35:27: note: suggested alternatives:
35 | VECTORIZED_MATH_1(log10,::log10)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:95:49: note: in definition of macro ‘VECTORIZED_MATH_1’
95 | return sugar::Vectorized_INTSXP<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1095:5: note: ‘std::log10’
1095 | log10(const complex<_Tp>& __z)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:35:19: note: ‘Rcpp::log10’
35 | VECTORIZED_MATH_1(log10,::log10)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:94:9: note: in definition of macro ‘VECTORIZED_MATH_1’
94 | __NAME__( const VectorBase<INTSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:95:64: error: template argument 1 is invalid
95 | return sugar::Vectorized_INTSXP<__SYMBOL__,NA,T>( t ) ; \
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:35:1: note: in expansion of macro ‘VECTORIZED_MATH_1’
35 | VECTORIZED_MATH_1(log10,::log10)
| ^~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h: At global scope:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:36:26: error: ‘::sqrt’ has not been declared; did you mean ‘std::sqrt’?
36 | VECTORIZED_MATH_1(sqrt,::sqrt)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:86:34: note: in definition of macro ‘VECTORIZED_MATH_1’
86 | inline sugar::Vectorized<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1195:5: note: ‘std::sqrt’ declared here
1195 | sqrt(const complex<_Tp>& __z) { return __complex_sqrt(__z.__rep()); }
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:36:26: error: ‘::sqrt’ has not been declared; did you mean ‘std::sqrt’?
36 | VECTORIZED_MATH_1(sqrt,::sqrt)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:86:34: note: in definition of macro ‘VECTORIZED_MATH_1’
86 | inline sugar::Vectorized<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1195:5: note: ‘std::sqrt’ declared here
1195 | sqrt(const complex<_Tp>& __z) { return __complex_sqrt(__z.__rep()); }
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:86:49: error: template argument 1 is invalid
86 | inline sugar::Vectorized<__SYMBOL__,NA,T> \
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:36:1: note: in expansion of macro ‘VECTORIZED_MATH_1’
36 | VECTORIZED_MATH_1(sqrt,::sqrt)
| ^~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h: In function ‘int Rcpp::sqrt(const VectorBase<14, NA_, T>&)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:36:26: error: ‘::sqrt’ has not been declared
36 | VECTORIZED_MATH_1(sqrt,::sqrt)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:88:42: note: in definition of macro ‘VECTORIZED_MATH_1’
88 | return sugar::Vectorized<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:36:26: note: suggested alternatives:
36 | VECTORIZED_MATH_1(sqrt,::sqrt)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:88:42: note: in definition of macro ‘VECTORIZED_MATH_1’
88 | return sugar::Vectorized<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1195:5: note: ‘std::sqrt’
1195 | sqrt(const complex<_Tp>& __z) { return __complex_sqrt(__z.__rep()); }
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:36:19: note: ‘Rcpp::sqrt’
36 | VECTORIZED_MATH_1(sqrt,::sqrt)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:87:9: note: in definition of macro ‘VECTORIZED_MATH_1’
87 | __NAME__( const VectorBase<REALSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:36:26: error: ‘::sqrt’ has not been declared
36 | VECTORIZED_MATH_1(sqrt,::sqrt)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:88:42: note: in definition of macro ‘VECTORIZED_MATH_1’
88 | return sugar::Vectorized<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:36:26: note: suggested alternatives:
36 | VECTORIZED_MATH_1(sqrt,::sqrt)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:88:42: note: in definition of macro ‘VECTORIZED_MATH_1’
88 | return sugar::Vectorized<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1195:5: note: ‘std::sqrt’
1195 | sqrt(const complex<_Tp>& __z) { return __complex_sqrt(__z.__rep()); }
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:36:19: note: ‘Rcpp::sqrt’
36 | VECTORIZED_MATH_1(sqrt,::sqrt)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:87:9: note: in definition of macro ‘VECTORIZED_MATH_1’
87 | __NAME__( const VectorBase<REALSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:88:57: error: template argument 1 is invalid
88 | return sugar::Vectorized<__SYMBOL__,NA,T>( t ) ; \
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:36:1: note: in expansion of macro ‘VECTORIZED_MATH_1’
36 | VECTORIZED_MATH_1(sqrt,::sqrt)
| ^~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h: At global scope:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:36:26: error: ‘::sqrt’ has not been declared
36 | VECTORIZED_MATH_1(sqrt,::sqrt)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:90:34: note: in definition of macro ‘VECTORIZED_MATH_1’
90 | inline sugar::Vectorized<__SYMBOL__,true,NumericVector> \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:36:26: note: suggested alternatives:
36 | VECTORIZED_MATH_1(sqrt,::sqrt)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:90:34: note: in definition of macro ‘VECTORIZED_MATH_1’
90 | inline sugar::Vectorized<__SYMBOL__,true,NumericVector> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1195:5: note: ‘std::sqrt’
1195 | sqrt(const complex<_Tp>& __z) { return __complex_sqrt(__z.__rep()); }
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:36:19: note: ‘Rcpp::sqrt’
36 | VECTORIZED_MATH_1(sqrt,::sqrt)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:87:9: note: in definition of macro ‘VECTORIZED_MATH_1’
87 | __NAME__( const VectorBase<REALSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:36:26: error: ‘::sqrt’ has not been declared
36 | VECTORIZED_MATH_1(sqrt,::sqrt)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:90:34: note: in definition of macro ‘VECTORIZED_MATH_1’
90 | inline sugar::Vectorized<__SYMBOL__,true,NumericVector> \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:36:26: note: suggested alternatives:
36 | VECTORIZED_MATH_1(sqrt,::sqrt)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:90:34: note: in definition of macro ‘VECTORIZED_MATH_1’
90 | inline sugar::Vectorized<__SYMBOL__,true,NumericVector> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1195:5: note: ‘std::sqrt’
1195 | sqrt(const complex<_Tp>& __z) { return __complex_sqrt(__z.__rep()); }
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:36:19: note: ‘Rcpp::sqrt’
36 | VECTORIZED_MATH_1(sqrt,::sqrt)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:87:9: note: in definition of macro ‘VECTORIZED_MATH_1’
87 | __NAME__( const VectorBase<REALSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:90:63: error: template argument 1 is invalid
90 | inline sugar::Vectorized<__SYMBOL__,true,NumericVector> \
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:36:1: note: in expansion of macro ‘VECTORIZED_MATH_1’
36 | VECTORIZED_MATH_1(sqrt,::sqrt)
| ^~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:36:26: error: ‘::sqrt’ has not been declared
36 | VECTORIZED_MATH_1(sqrt,::sqrt)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:93:41: note: in definition of macro ‘VECTORIZED_MATH_1’
93 | inline sugar::Vectorized_INTSXP<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:36:26: note: suggested alternatives:
36 | VECTORIZED_MATH_1(sqrt,::sqrt)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:93:41: note: in definition of macro ‘VECTORIZED_MATH_1’
93 | inline sugar::Vectorized_INTSXP<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1195:5: note: ‘std::sqrt’
1195 | sqrt(const complex<_Tp>& __z) { return __complex_sqrt(__z.__rep()); }
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:36:19: note: ‘Rcpp::sqrt’
36 | VECTORIZED_MATH_1(sqrt,::sqrt)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:91:9: note: in definition of macro ‘VECTORIZED_MATH_1’
91 | __NAME__( SEXP x){ return __NAME__( NumericVector( x ) ) ; } \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:36:26: error: ‘::sqrt’ has not been declared
36 | VECTORIZED_MATH_1(sqrt,::sqrt)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:93:41: note: in definition of macro ‘VECTORIZED_MATH_1’
93 | inline sugar::Vectorized_INTSXP<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:36:26: note: suggested alternatives:
36 | VECTORIZED_MATH_1(sqrt,::sqrt)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:93:41: note: in definition of macro ‘VECTORIZED_MATH_1’
93 | inline sugar::Vectorized_INTSXP<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1195:5: note: ‘std::sqrt’
1195 | sqrt(const complex<_Tp>& __z) { return __complex_sqrt(__z.__rep()); }
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:36:19: note: ‘Rcpp::sqrt’
36 | VECTORIZED_MATH_1(sqrt,::sqrt)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:91:9: note: in definition of macro ‘VECTORIZED_MATH_1’
91 | __NAME__( SEXP x){ return __NAME__( NumericVector( x ) ) ; } \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:93:56: error: template argument 1 is invalid
93 | inline sugar::Vectorized_INTSXP<__SYMBOL__,NA,T> \
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:36:1: note: in expansion of macro ‘VECTORIZED_MATH_1’
36 | VECTORIZED_MATH_1(sqrt,::sqrt)
| ^~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h: In function ‘int Rcpp::sqrt(const VectorBase<13, NA_, T>&)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:36:26: error: ‘::sqrt’ has not been declared
36 | VECTORIZED_MATH_1(sqrt,::sqrt)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:95:49: note: in definition of macro ‘VECTORIZED_MATH_1’
95 | return sugar::Vectorized_INTSXP<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:36:26: note: suggested alternatives:
36 | VECTORIZED_MATH_1(sqrt,::sqrt)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:95:49: note: in definition of macro ‘VECTORIZED_MATH_1’
95 | return sugar::Vectorized_INTSXP<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1195:5: note: ‘std::sqrt’
1195 | sqrt(const complex<_Tp>& __z) { return __complex_sqrt(__z.__rep()); }
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:36:19: note: ‘Rcpp::sqrt’
36 | VECTORIZED_MATH_1(sqrt,::sqrt)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:94:9: note: in definition of macro ‘VECTORIZED_MATH_1’
94 | __NAME__( const VectorBase<INTSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:36:26: error: ‘::sqrt’ has not been declared
36 | VECTORIZED_MATH_1(sqrt,::sqrt)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:95:49: note: in definition of macro ‘VECTORIZED_MATH_1’
95 | return sugar::Vectorized_INTSXP<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:36:26: note: suggested alternatives:
36 | VECTORIZED_MATH_1(sqrt,::sqrt)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:95:49: note: in definition of macro ‘VECTORIZED_MATH_1’
95 | return sugar::Vectorized_INTSXP<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1195:5: note: ‘std::sqrt’
1195 | sqrt(const complex<_Tp>& __z) { return __complex_sqrt(__z.__rep()); }
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:36:19: note: ‘Rcpp::sqrt’
36 | VECTORIZED_MATH_1(sqrt,::sqrt)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:94:9: note: in definition of macro ‘VECTORIZED_MATH_1’
94 | __NAME__( const VectorBase<INTSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:95:64: error: template argument 1 is invalid
95 | return sugar::Vectorized_INTSXP<__SYMBOL__,NA,T>( t ) ; \
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:36:1: note: in expansion of macro ‘VECTORIZED_MATH_1’
36 | VECTORIZED_MATH_1(sqrt,::sqrt)
| ^~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h: At global scope:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:37:25: error: ‘::sin’ has not been declared; did you mean ‘std::sin’?
37 | VECTORIZED_MATH_1(sin,::sin)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:86:34: note: in definition of macro ‘VECTORIZED_MATH_1’
86 | inline sugar::Vectorized<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1121:5: note: ‘std::sin’ declared here
1121 | sin(const complex<_Tp>& __z) { return __complex_sin(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:37:25: error: ‘::sin’ has not been declared; did you mean ‘std::sin’?
37 | VECTORIZED_MATH_1(sin,::sin)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:86:34: note: in definition of macro ‘VECTORIZED_MATH_1’
86 | inline sugar::Vectorized<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1121:5: note: ‘std::sin’ declared here
1121 | sin(const complex<_Tp>& __z) { return __complex_sin(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:86:49: error: template argument 1 is invalid
86 | inline sugar::Vectorized<__SYMBOL__,NA,T> \
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:37:1: note: in expansion of macro ‘VECTORIZED_MATH_1’
37 | VECTORIZED_MATH_1(sin,::sin)
| ^~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h: In function ‘int Rcpp::sin(const VectorBase<14, NA_, T>&)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:37:25: error: ‘::sin’ has not been declared
37 | VECTORIZED_MATH_1(sin,::sin)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:88:42: note: in definition of macro ‘VECTORIZED_MATH_1’
88 | return sugar::Vectorized<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:37:25: note: suggested alternatives:
37 | VECTORIZED_MATH_1(sin,::sin)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:88:42: note: in definition of macro ‘VECTORIZED_MATH_1’
88 | return sugar::Vectorized<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1121:5: note: ‘std::sin’
1121 | sin(const complex<_Tp>& __z) { return __complex_sin(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:37:19: note: ‘Rcpp::sin’
37 | VECTORIZED_MATH_1(sin,::sin)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:87:9: note: in definition of macro ‘VECTORIZED_MATH_1’
87 | __NAME__( const VectorBase<REALSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:37:25: error: ‘::sin’ has not been declared
37 | VECTORIZED_MATH_1(sin,::sin)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:88:42: note: in definition of macro ‘VECTORIZED_MATH_1’
88 | return sugar::Vectorized<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:37:25: note: suggested alternatives:
37 | VECTORIZED_MATH_1(sin,::sin)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:88:42: note: in definition of macro ‘VECTORIZED_MATH_1’
88 | return sugar::Vectorized<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1121:5: note: ‘std::sin’
1121 | sin(const complex<_Tp>& __z) { return __complex_sin(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:37:19: note: ‘Rcpp::sin’
37 | VECTORIZED_MATH_1(sin,::sin)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:87:9: note: in definition of macro ‘VECTORIZED_MATH_1’
87 | __NAME__( const VectorBase<REALSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:88:57: error: template argument 1 is invalid
88 | return sugar::Vectorized<__SYMBOL__,NA,T>( t ) ; \
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:37:1: note: in expansion of macro ‘VECTORIZED_MATH_1’
37 | VECTORIZED_MATH_1(sin,::sin)
| ^~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h: At global scope:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:37:25: error: ‘::sin’ has not been declared
37 | VECTORIZED_MATH_1(sin,::sin)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:90:34: note: in definition of macro ‘VECTORIZED_MATH_1’
90 | inline sugar::Vectorized<__SYMBOL__,true,NumericVector> \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:37:25: note: suggested alternatives:
37 | VECTORIZED_MATH_1(sin,::sin)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:90:34: note: in definition of macro ‘VECTORIZED_MATH_1’
90 | inline sugar::Vectorized<__SYMBOL__,true,NumericVector> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1121:5: note: ‘std::sin’
1121 | sin(const complex<_Tp>& __z) { return __complex_sin(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:37:19: note: ‘Rcpp::sin’
37 | VECTORIZED_MATH_1(sin,::sin)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:87:9: note: in definition of macro ‘VECTORIZED_MATH_1’
87 | __NAME__( const VectorBase<REALSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:37:25: error: ‘::sin’ has not been declared
37 | VECTORIZED_MATH_1(sin,::sin)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:90:34: note: in definition of macro ‘VECTORIZED_MATH_1’
90 | inline sugar::Vectorized<__SYMBOL__,true,NumericVector> \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:37:25: note: suggested alternatives:
37 | VECTORIZED_MATH_1(sin,::sin)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:90:34: note: in definition of macro ‘VECTORIZED_MATH_1’
90 | inline sugar::Vectorized<__SYMBOL__,true,NumericVector> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1121:5: note: ‘std::sin’
1121 | sin(const complex<_Tp>& __z) { return __complex_sin(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:37:19: note: ‘Rcpp::sin’
37 | VECTORIZED_MATH_1(sin,::sin)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:87:9: note: in definition of macro ‘VECTORIZED_MATH_1’
87 | __NAME__( const VectorBase<REALSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:90:63: error: template argument 1 is invalid
90 | inline sugar::Vectorized<__SYMBOL__,true,NumericVector> \
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:37:1: note: in expansion of macro ‘VECTORIZED_MATH_1’
37 | VECTORIZED_MATH_1(sin,::sin)
| ^~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:37:25: error: ‘::sin’ has not been declared
37 | VECTORIZED_MATH_1(sin,::sin)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:93:41: note: in definition of macro ‘VECTORIZED_MATH_1’
93 | inline sugar::Vectorized_INTSXP<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:37:25: note: suggested alternatives:
37 | VECTORIZED_MATH_1(sin,::sin)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:93:41: note: in definition of macro ‘VECTORIZED_MATH_1’
93 | inline sugar::Vectorized_INTSXP<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1121:5: note: ‘std::sin’
1121 | sin(const complex<_Tp>& __z) { return __complex_sin(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:37:19: note: ‘Rcpp::sin’
37 | VECTORIZED_MATH_1(sin,::sin)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:91:9: note: in definition of macro ‘VECTORIZED_MATH_1’
91 | __NAME__( SEXP x){ return __NAME__( NumericVector( x ) ) ; } \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:37:25: error: ‘::sin’ has not been declared
37 | VECTORIZED_MATH_1(sin,::sin)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:93:41: note: in definition of macro ‘VECTORIZED_MATH_1’
93 | inline sugar::Vectorized_INTSXP<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:37:25: note: suggested alternatives:
37 | VECTORIZED_MATH_1(sin,::sin)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:93:41: note: in definition of macro ‘VECTORIZED_MATH_1’
93 | inline sugar::Vectorized_INTSXP<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1121:5: note: ‘std::sin’
1121 | sin(const complex<_Tp>& __z) { return __complex_sin(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:37:19: note: ‘Rcpp::sin’
37 | VECTORIZED_MATH_1(sin,::sin)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:91:9: note: in definition of macro ‘VECTORIZED_MATH_1’
91 | __NAME__( SEXP x){ return __NAME__( NumericVector( x ) ) ; } \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:93:56: error: template argument 1 is invalid
93 | inline sugar::Vectorized_INTSXP<__SYMBOL__,NA,T> \
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:37:1: note: in expansion of macro ‘VECTORIZED_MATH_1’
37 | VECTORIZED_MATH_1(sin,::sin)
| ^~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h: In function ‘int Rcpp::sin(const VectorBase<13, NA_, T>&)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:37:25: error: ‘::sin’ has not been declared
37 | VECTORIZED_MATH_1(sin,::sin)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:95:49: note: in definition of macro ‘VECTORIZED_MATH_1’
95 | return sugar::Vectorized_INTSXP<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:37:25: note: suggested alternatives:
37 | VECTORIZED_MATH_1(sin,::sin)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:95:49: note: in definition of macro ‘VECTORIZED_MATH_1’
95 | return sugar::Vectorized_INTSXP<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1121:5: note: ‘std::sin’
1121 | sin(const complex<_Tp>& __z) { return __complex_sin(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:37:19: note: ‘Rcpp::sin’
37 | VECTORIZED_MATH_1(sin,::sin)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:94:9: note: in definition of macro ‘VECTORIZED_MATH_1’
94 | __NAME__( const VectorBase<INTSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:37:25: error: ‘::sin’ has not been declared
37 | VECTORIZED_MATH_1(sin,::sin)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:95:49: note: in definition of macro ‘VECTORIZED_MATH_1’
95 | return sugar::Vectorized_INTSXP<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:37:25: note: suggested alternatives:
37 | VECTORIZED_MATH_1(sin,::sin)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:95:49: note: in definition of macro ‘VECTORIZED_MATH_1’
95 | return sugar::Vectorized_INTSXP<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1121:5: note: ‘std::sin’
1121 | sin(const complex<_Tp>& __z) { return __complex_sin(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:37:19: note: ‘Rcpp::sin’
37 | VECTORIZED_MATH_1(sin,::sin)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:94:9: note: in definition of macro ‘VECTORIZED_MATH_1’
94 | __NAME__( const VectorBase<INTSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:95:64: error: template argument 1 is invalid
95 | return sugar::Vectorized_INTSXP<__SYMBOL__,NA,T>( t ) ; \
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:37:1: note: in expansion of macro ‘VECTORIZED_MATH_1’
37 | VECTORIZED_MATH_1(sin,::sin)
| ^~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h: At global scope:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:38:26: error: ‘::sinh’ has not been declared; did you mean ‘std::sinh’?
38 | VECTORIZED_MATH_1(sinh,::sinh)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:86:34: note: in definition of macro ‘VECTORIZED_MATH_1’
86 | inline sugar::Vectorized<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1151:5: note: ‘std::sinh’ declared here
1151 | sinh(const complex<_Tp>& __z) { return __complex_sinh(__z.__rep()); }
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:38:26: error: ‘::sinh’ has not been declared; did you mean ‘std::sinh’?
38 | VECTORIZED_MATH_1(sinh,::sinh)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:86:34: note: in definition of macro ‘VECTORIZED_MATH_1’
86 | inline sugar::Vectorized<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1151:5: note: ‘std::sinh’ declared here
1151 | sinh(const complex<_Tp>& __z) { return __complex_sinh(__z.__rep()); }
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:86:49: error: template argument 1 is invalid
86 | inline sugar::Vectorized<__SYMBOL__,NA,T> \
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:38:1: note: in expansion of macro ‘VECTORIZED_MATH_1’
38 | VECTORIZED_MATH_1(sinh,::sinh)
| ^~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h: In function ‘int Rcpp::sinh(const VectorBase<14, NA_, T>&)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:38:26: error: ‘::sinh’ has not been declared
38 | VECTORIZED_MATH_1(sinh,::sinh)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:88:42: note: in definition of macro ‘VECTORIZED_MATH_1’
88 | return sugar::Vectorized<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:38:26: note: suggested alternatives:
38 | VECTORIZED_MATH_1(sinh,::sinh)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:88:42: note: in definition of macro ‘VECTORIZED_MATH_1’
88 | return sugar::Vectorized<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1151:5: note: ‘std::sinh’
1151 | sinh(const complex<_Tp>& __z) { return __complex_sinh(__z.__rep()); }
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:38:19: note: ‘Rcpp::sinh’
38 | VECTORIZED_MATH_1(sinh,::sinh)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:87:9: note: in definition of macro ‘VECTORIZED_MATH_1’
87 | __NAME__( const VectorBase<REALSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:38:26: error: ‘::sinh’ has not been declared
38 | VECTORIZED_MATH_1(sinh,::sinh)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:88:42: note: in definition of macro ‘VECTORIZED_MATH_1’
88 | return sugar::Vectorized<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:38:26: note: suggested alternatives:
38 | VECTORIZED_MATH_1(sinh,::sinh)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:88:42: note: in definition of macro ‘VECTORIZED_MATH_1’
88 | return sugar::Vectorized<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1151:5: note: ‘std::sinh’
1151 | sinh(const complex<_Tp>& __z) { return __complex_sinh(__z.__rep()); }
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:38:19: note: ‘Rcpp::sinh’
38 | VECTORIZED_MATH_1(sinh,::sinh)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:87:9: note: in definition of macro ‘VECTORIZED_MATH_1’
87 | __NAME__( const VectorBase<REALSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:88:57: error: template argument 1 is invalid
88 | return sugar::Vectorized<__SYMBOL__,NA,T>( t ) ; \
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:38:1: note: in expansion of macro ‘VECTORIZED_MATH_1’
38 | VECTORIZED_MATH_1(sinh,::sinh)
| ^~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h: At global scope:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:38:26: error: ‘::sinh’ has not been declared
38 | VECTORIZED_MATH_1(sinh,::sinh)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:90:34: note: in definition of macro ‘VECTORIZED_MATH_1’
90 | inline sugar::Vectorized<__SYMBOL__,true,NumericVector> \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:38:26: note: suggested alternatives:
38 | VECTORIZED_MATH_1(sinh,::sinh)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:90:34: note: in definition of macro ‘VECTORIZED_MATH_1’
90 | inline sugar::Vectorized<__SYMBOL__,true,NumericVector> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1151:5: note: ‘std::sinh’
1151 | sinh(const complex<_Tp>& __z) { return __complex_sinh(__z.__rep()); }
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:38:19: note: ‘Rcpp::sinh’
38 | VECTORIZED_MATH_1(sinh,::sinh)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:87:9: note: in definition of macro ‘VECTORIZED_MATH_1’
87 | __NAME__( const VectorBase<REALSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:38:26: error: ‘::sinh’ has not been declared
38 | VECTORIZED_MATH_1(sinh,::sinh)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:90:34: note: in definition of macro ‘VECTORIZED_MATH_1’
90 | inline sugar::Vectorized<__SYMBOL__,true,NumericVector> \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:38:26: note: suggested alternatives:
38 | VECTORIZED_MATH_1(sinh,::sinh)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:90:34: note: in definition of macro ‘VECTORIZED_MATH_1’
90 | inline sugar::Vectorized<__SYMBOL__,true,NumericVector> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1151:5: note: ‘std::sinh’
1151 | sinh(const complex<_Tp>& __z) { return __complex_sinh(__z.__rep()); }
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:38:19: note: ‘Rcpp::sinh’
38 | VECTORIZED_MATH_1(sinh,::sinh)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:87:9: note: in definition of macro ‘VECTORIZED_MATH_1’
87 | __NAME__( const VectorBase<REALSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:90:63: error: template argument 1 is invalid
90 | inline sugar::Vectorized<__SYMBOL__,true,NumericVector> \
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:38:1: note: in expansion of macro ‘VECTORIZED_MATH_1’
38 | VECTORIZED_MATH_1(sinh,::sinh)
| ^~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:38:26: error: ‘::sinh’ has not been declared
38 | VECTORIZED_MATH_1(sinh,::sinh)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:93:41: note: in definition of macro ‘VECTORIZED_MATH_1’
93 | inline sugar::Vectorized_INTSXP<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:38:26: note: suggested alternatives:
38 | VECTORIZED_MATH_1(sinh,::sinh)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:93:41: note: in definition of macro ‘VECTORIZED_MATH_1’
93 | inline sugar::Vectorized_INTSXP<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1151:5: note: ‘std::sinh’
1151 | sinh(const complex<_Tp>& __z) { return __complex_sinh(__z.__rep()); }
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:38:19: note: ‘Rcpp::sinh’
38 | VECTORIZED_MATH_1(sinh,::sinh)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:91:9: note: in definition of macro ‘VECTORIZED_MATH_1’
91 | __NAME__( SEXP x){ return __NAME__( NumericVector( x ) ) ; } \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:38:26: error: ‘::sinh’ has not been declared
38 | VECTORIZED_MATH_1(sinh,::sinh)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:93:41: note: in definition of macro ‘VECTORIZED_MATH_1’
93 | inline sugar::Vectorized_INTSXP<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:38:26: note: suggested alternatives:
38 | VECTORIZED_MATH_1(sinh,::sinh)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:93:41: note: in definition of macro ‘VECTORIZED_MATH_1’
93 | inline sugar::Vectorized_INTSXP<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1151:5: note: ‘std::sinh’
1151 | sinh(const complex<_Tp>& __z) { return __complex_sinh(__z.__rep()); }
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:38:19: note: ‘Rcpp::sinh’
38 | VECTORIZED_MATH_1(sinh,::sinh)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:91:9: note: in definition of macro ‘VECTORIZED_MATH_1’
91 | __NAME__( SEXP x){ return __NAME__( NumericVector( x ) ) ; } \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:93:56: error: template argument 1 is invalid
93 | inline sugar::Vectorized_INTSXP<__SYMBOL__,NA,T> \
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:38:1: note: in expansion of macro ‘VECTORIZED_MATH_1’
38 | VECTORIZED_MATH_1(sinh,::sinh)
| ^~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h: In function ‘int Rcpp::sinh(const VectorBase<13, NA_, T>&)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:38:26: error: ‘::sinh’ has not been declared
38 | VECTORIZED_MATH_1(sinh,::sinh)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:95:49: note: in definition of macro ‘VECTORIZED_MATH_1’
95 | return sugar::Vectorized_INTSXP<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:38:26: note: suggested alternatives:
38 | VECTORIZED_MATH_1(sinh,::sinh)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:95:49: note: in definition of macro ‘VECTORIZED_MATH_1’
95 | return sugar::Vectorized_INTSXP<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1151:5: note: ‘std::sinh’
1151 | sinh(const complex<_Tp>& __z) { return __complex_sinh(__z.__rep()); }
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:38:19: note: ‘Rcpp::sinh’
38 | VECTORIZED_MATH_1(sinh,::sinh)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:94:9: note: in definition of macro ‘VECTORIZED_MATH_1’
94 | __NAME__( const VectorBase<INTSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:38:26: error: ‘::sinh’ has not been declared
38 | VECTORIZED_MATH_1(sinh,::sinh)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:95:49: note: in definition of macro ‘VECTORIZED_MATH_1’
95 | return sugar::Vectorized_INTSXP<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:38:26: note: suggested alternatives:
38 | VECTORIZED_MATH_1(sinh,::sinh)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:95:49: note: in definition of macro ‘VECTORIZED_MATH_1’
95 | return sugar::Vectorized_INTSXP<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1151:5: note: ‘std::sinh’
1151 | sinh(const complex<_Tp>& __z) { return __complex_sinh(__z.__rep()); }
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:38:19: note: ‘Rcpp::sinh’
38 | VECTORIZED_MATH_1(sinh,::sinh)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:94:9: note: in definition of macro ‘VECTORIZED_MATH_1’
94 | __NAME__( const VectorBase<INTSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:95:64: error: template argument 1 is invalid
95 | return sugar::Vectorized_INTSXP<__SYMBOL__,NA,T>( t ) ; \
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:38:1: note: in expansion of macro ‘VECTORIZED_MATH_1’
38 | VECTORIZED_MATH_1(sinh,::sinh)
| ^~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h: At global scope:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:39:25: error: ‘::tan’ has not been declared; did you mean ‘std::tan’?
39 | VECTORIZED_MATH_1(tan,::tan)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:86:34: note: in definition of macro ‘VECTORIZED_MATH_1’
86 | inline sugar::Vectorized<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1222:5: note: ‘std::tan’ declared here
1222 | tan(const complex<_Tp>& __z) { return __complex_tan(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:39:25: error: ‘::tan’ has not been declared; did you mean ‘std::tan’?
39 | VECTORIZED_MATH_1(tan,::tan)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:86:34: note: in definition of macro ‘VECTORIZED_MATH_1’
86 | inline sugar::Vectorized<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1222:5: note: ‘std::tan’ declared here
1222 | tan(const complex<_Tp>& __z) { return __complex_tan(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:86:49: error: template argument 1 is invalid
86 | inline sugar::Vectorized<__SYMBOL__,NA,T> \
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:39:1: note: in expansion of macro ‘VECTORIZED_MATH_1’
39 | VECTORIZED_MATH_1(tan,::tan)
| ^~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h: In function ‘int Rcpp::tan(const VectorBase<14, NA_, T>&)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:39:25: error: ‘::tan’ has not been declared
39 | VECTORIZED_MATH_1(tan,::tan)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:88:42: note: in definition of macro ‘VECTORIZED_MATH_1’
88 | return sugar::Vectorized<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:39:25: note: suggested alternatives:
39 | VECTORIZED_MATH_1(tan,::tan)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:88:42: note: in definition of macro ‘VECTORIZED_MATH_1’
88 | return sugar::Vectorized<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1222:5: note: ‘std::tan’
1222 | tan(const complex<_Tp>& __z) { return __complex_tan(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:39:19: note: ‘Rcpp::tan’
39 | VECTORIZED_MATH_1(tan,::tan)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:87:9: note: in definition of macro ‘VECTORIZED_MATH_1’
87 | __NAME__( const VectorBase<REALSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:39:25: error: ‘::tan’ has not been declared
39 | VECTORIZED_MATH_1(tan,::tan)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:88:42: note: in definition of macro ‘VECTORIZED_MATH_1’
88 | return sugar::Vectorized<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:39:25: note: suggested alternatives:
39 | VECTORIZED_MATH_1(tan,::tan)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:88:42: note: in definition of macro ‘VECTORIZED_MATH_1’
88 | return sugar::Vectorized<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1222:5: note: ‘std::tan’
1222 | tan(const complex<_Tp>& __z) { return __complex_tan(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:39:19: note: ‘Rcpp::tan’
39 | VECTORIZED_MATH_1(tan,::tan)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:87:9: note: in definition of macro ‘VECTORIZED_MATH_1’
87 | __NAME__( const VectorBase<REALSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:88:57: error: template argument 1 is invalid
88 | return sugar::Vectorized<__SYMBOL__,NA,T>( t ) ; \
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:39:1: note: in expansion of macro ‘VECTORIZED_MATH_1’
39 | VECTORIZED_MATH_1(tan,::tan)
| ^~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h: At global scope:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:39:25: error: ‘::tan’ has not been declared
39 | VECTORIZED_MATH_1(tan,::tan)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:90:34: note: in definition of macro ‘VECTORIZED_MATH_1’
90 | inline sugar::Vectorized<__SYMBOL__,true,NumericVector> \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:39:25: note: suggested alternatives:
39 | VECTORIZED_MATH_1(tan,::tan)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:90:34: note: in definition of macro ‘VECTORIZED_MATH_1’
90 | inline sugar::Vectorized<__SYMBOL__,true,NumericVector> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1222:5: note: ‘std::tan’
1222 | tan(const complex<_Tp>& __z) { return __complex_tan(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:39:19: note: ‘Rcpp::tan’
39 | VECTORIZED_MATH_1(tan,::tan)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:87:9: note: in definition of macro ‘VECTORIZED_MATH_1’
87 | __NAME__( const VectorBase<REALSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:39:25: error: ‘::tan’ has not been declared
39 | VECTORIZED_MATH_1(tan,::tan)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:90:34: note: in definition of macro ‘VECTORIZED_MATH_1’
90 | inline sugar::Vectorized<__SYMBOL__,true,NumericVector> \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:39:25: note: suggested alternatives:
39 | VECTORIZED_MATH_1(tan,::tan)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:90:34: note: in definition of macro ‘VECTORIZED_MATH_1’
90 | inline sugar::Vectorized<__SYMBOL__,true,NumericVector> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1222:5: note: ‘std::tan’
1222 | tan(const complex<_Tp>& __z) { return __complex_tan(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:39:19: note: ‘Rcpp::tan’
39 | VECTORIZED_MATH_1(tan,::tan)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:87:9: note: in definition of macro ‘VECTORIZED_MATH_1’
87 | __NAME__( const VectorBase<REALSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:90:63: error: template argument 1 is invalid
90 | inline sugar::Vectorized<__SYMBOL__,true,NumericVector> \
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:39:1: note: in expansion of macro ‘VECTORIZED_MATH_1’
39 | VECTORIZED_MATH_1(tan,::tan)
| ^~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:39:25: error: ‘::tan’ has not been declared
39 | VECTORIZED_MATH_1(tan,::tan)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:93:41: note: in definition of macro ‘VECTORIZED_MATH_1’
93 | inline sugar::Vectorized_INTSXP<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:39:25: note: suggested alternatives:
39 | VECTORIZED_MATH_1(tan,::tan)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:93:41: note: in definition of macro ‘VECTORIZED_MATH_1’
93 | inline sugar::Vectorized_INTSXP<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1222:5: note: ‘std::tan’
1222 | tan(const complex<_Tp>& __z) { return __complex_tan(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:39:19: note: ‘Rcpp::tan’
39 | VECTORIZED_MATH_1(tan,::tan)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:91:9: note: in definition of macro ‘VECTORIZED_MATH_1’
91 | __NAME__( SEXP x){ return __NAME__( NumericVector( x ) ) ; } \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:39:25: error: ‘::tan’ has not been declared
39 | VECTORIZED_MATH_1(tan,::tan)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:93:41: note: in definition of macro ‘VECTORIZED_MATH_1’
93 | inline sugar::Vectorized_INTSXP<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:39:25: note: suggested alternatives:
39 | VECTORIZED_MATH_1(tan,::tan)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:93:41: note: in definition of macro ‘VECTORIZED_MATH_1’
93 | inline sugar::Vectorized_INTSXP<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1222:5: note: ‘std::tan’
1222 | tan(const complex<_Tp>& __z) { return __complex_tan(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:39:19: note: ‘Rcpp::tan’
39 | VECTORIZED_MATH_1(tan,::tan)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:91:9: note: in definition of macro ‘VECTORIZED_MATH_1’
91 | __NAME__( SEXP x){ return __NAME__( NumericVector( x ) ) ; } \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:93:56: error: template argument 1 is invalid
93 | inline sugar::Vectorized_INTSXP<__SYMBOL__,NA,T> \
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:39:1: note: in expansion of macro ‘VECTORIZED_MATH_1’
39 | VECTORIZED_MATH_1(tan,::tan)
| ^~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h: In function ‘int Rcpp::tan(const VectorBase<13, NA_, T>&)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:39:25: error: ‘::tan’ has not been declared
39 | VECTORIZED_MATH_1(tan,::tan)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:95:49: note: in definition of macro ‘VECTORIZED_MATH_1’
95 | return sugar::Vectorized_INTSXP<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:39:25: note: suggested alternatives:
39 | VECTORIZED_MATH_1(tan,::tan)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:95:49: note: in definition of macro ‘VECTORIZED_MATH_1’
95 | return sugar::Vectorized_INTSXP<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1222:5: note: ‘std::tan’
1222 | tan(const complex<_Tp>& __z) { return __complex_tan(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:39:19: note: ‘Rcpp::tan’
39 | VECTORIZED_MATH_1(tan,::tan)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:94:9: note: in definition of macro ‘VECTORIZED_MATH_1’
94 | __NAME__( const VectorBase<INTSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:39:25: error: ‘::tan’ has not been declared
39 | VECTORIZED_MATH_1(tan,::tan)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:95:49: note: in definition of macro ‘VECTORIZED_MATH_1’
95 | return sugar::Vectorized_INTSXP<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:39:25: note: suggested alternatives:
39 | VECTORIZED_MATH_1(tan,::tan)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:95:49: note: in definition of macro ‘VECTORIZED_MATH_1’
95 | return sugar::Vectorized_INTSXP<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1222:5: note: ‘std::tan’
1222 | tan(const complex<_Tp>& __z) { return __complex_tan(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:39:19: note: ‘Rcpp::tan’
39 | VECTORIZED_MATH_1(tan,::tan)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:94:9: note: in definition of macro ‘VECTORIZED_MATH_1’
94 | __NAME__( const VectorBase<INTSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:95:64: error: template argument 1 is invalid
95 | return sugar::Vectorized_INTSXP<__SYMBOL__,NA,T>( t ) ; \
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:39:1: note: in expansion of macro ‘VECTORIZED_MATH_1’
39 | VECTORIZED_MATH_1(tan,::tan)
| ^~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h: At global scope:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:40:26: error: ‘::tanh’ has not been declared; did you mean ‘std::tanh’?
40 | VECTORIZED_MATH_1(tanh,::tanh)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:86:34: note: in definition of macro ‘VECTORIZED_MATH_1’
86 | inline sugar::Vectorized<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1250:5: note: ‘std::tanh’ declared here
1250 | tanh(const complex<_Tp>& __z) { return __complex_tanh(__z.__rep()); }
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:40:26: error: ‘::tanh’ has not been declared; did you mean ‘std::tanh’?
40 | VECTORIZED_MATH_1(tanh,::tanh)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:86:34: note: in definition of macro ‘VECTORIZED_MATH_1’
86 | inline sugar::Vectorized<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1250:5: note: ‘std::tanh’ declared here
1250 | tanh(const complex<_Tp>& __z) { return __complex_tanh(__z.__rep()); }
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:86:49: error: template argument 1 is invalid
86 | inline sugar::Vectorized<__SYMBOL__,NA,T> \
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:40:1: note: in expansion of macro ‘VECTORIZED_MATH_1’
40 | VECTORIZED_MATH_1(tanh,::tanh)
| ^~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h: In function ‘int Rcpp::tanh(const VectorBase<14, NA_, T>&)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:40:26: error: ‘::tanh’ has not been declared
40 | VECTORIZED_MATH_1(tanh,::tanh)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:88:42: note: in definition of macro ‘VECTORIZED_MATH_1’
88 | return sugar::Vectorized<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:40:26: note: suggested alternatives:
40 | VECTORIZED_MATH_1(tanh,::tanh)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:88:42: note: in definition of macro ‘VECTORIZED_MATH_1’
88 | return sugar::Vectorized<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1250:5: note: ‘std::tanh’
1250 | tanh(const complex<_Tp>& __z) { return __complex_tanh(__z.__rep()); }
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:40:19: note: ‘Rcpp::tanh’
40 | VECTORIZED_MATH_1(tanh,::tanh)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:87:9: note: in definition of macro ‘VECTORIZED_MATH_1’
87 | __NAME__( const VectorBase<REALSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:40:26: error: ‘::tanh’ has not been declared
40 | VECTORIZED_MATH_1(tanh,::tanh)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:88:42: note: in definition of macro ‘VECTORIZED_MATH_1’
88 | return sugar::Vectorized<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:40:26: note: suggested alternatives:
40 | VECTORIZED_MATH_1(tanh,::tanh)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:88:42: note: in definition of macro ‘VECTORIZED_MATH_1’
88 | return sugar::Vectorized<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1250:5: note: ‘std::tanh’
1250 | tanh(const complex<_Tp>& __z) { return __complex_tanh(__z.__rep()); }
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:40:19: note: ‘Rcpp::tanh’
40 | VECTORIZED_MATH_1(tanh,::tanh)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:87:9: note: in definition of macro ‘VECTORIZED_MATH_1’
87 | __NAME__( const VectorBase<REALSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:88:57: error: template argument 1 is invalid
88 | return sugar::Vectorized<__SYMBOL__,NA,T>( t ) ; \
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:40:1: note: in expansion of macro ‘VECTORIZED_MATH_1’
40 | VECTORIZED_MATH_1(tanh,::tanh)
| ^~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h: At global scope:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:40:26: error: ‘::tanh’ has not been declared
40 | VECTORIZED_MATH_1(tanh,::tanh)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:90:34: note: in definition of macro ‘VECTORIZED_MATH_1’
90 | inline sugar::Vectorized<__SYMBOL__,true,NumericVector> \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:40:26: note: suggested alternatives:
40 | VECTORIZED_MATH_1(tanh,::tanh)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:90:34: note: in definition of macro ‘VECTORIZED_MATH_1’
90 | inline sugar::Vectorized<__SYMBOL__,true,NumericVector> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1250:5: note: ‘std::tanh’
1250 | tanh(const complex<_Tp>& __z) { return __complex_tanh(__z.__rep()); }
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:40:19: note: ‘Rcpp::tanh’
40 | VECTORIZED_MATH_1(tanh,::tanh)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:87:9: note: in definition of macro ‘VECTORIZED_MATH_1’
87 | __NAME__( const VectorBase<REALSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:40:26: error: ‘::tanh’ has not been declared
40 | VECTORIZED_MATH_1(tanh,::tanh)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:90:34: note: in definition of macro ‘VECTORIZED_MATH_1’
90 | inline sugar::Vectorized<__SYMBOL__,true,NumericVector> \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:40:26: note: suggested alternatives:
40 | VECTORIZED_MATH_1(tanh,::tanh)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:90:34: note: in definition of macro ‘VECTORIZED_MATH_1’
90 | inline sugar::Vectorized<__SYMBOL__,true,NumericVector> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1250:5: note: ‘std::tanh’
1250 | tanh(const complex<_Tp>& __z) { return __complex_tanh(__z.__rep()); }
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:40:19: note: ‘Rcpp::tanh’
40 | VECTORIZED_MATH_1(tanh,::tanh)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:87:9: note: in definition of macro ‘VECTORIZED_MATH_1’
87 | __NAME__( const VectorBase<REALSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:90:63: error: template argument 1 is invalid
90 | inline sugar::Vectorized<__SYMBOL__,true,NumericVector> \
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:40:1: note: in expansion of macro ‘VECTORIZED_MATH_1’
40 | VECTORIZED_MATH_1(tanh,::tanh)
| ^~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:40:26: error: ‘::tanh’ has not been declared
40 | VECTORIZED_MATH_1(tanh,::tanh)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:93:41: note: in definition of macro ‘VECTORIZED_MATH_1’
93 | inline sugar::Vectorized_INTSXP<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:40:26: note: suggested alternatives:
40 | VECTORIZED_MATH_1(tanh,::tanh)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:93:41: note: in definition of macro ‘VECTORIZED_MATH_1’
93 | inline sugar::Vectorized_INTSXP<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1250:5: note: ‘std::tanh’
1250 | tanh(const complex<_Tp>& __z) { return __complex_tanh(__z.__rep()); }
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:40:19: note: ‘Rcpp::tanh’
40 | VECTORIZED_MATH_1(tanh,::tanh)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:91:9: note: in definition of macro ‘VECTORIZED_MATH_1’
91 | __NAME__( SEXP x){ return __NAME__( NumericVector( x ) ) ; } \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:40:26: error: ‘::tanh’ has not been declared
40 | VECTORIZED_MATH_1(tanh,::tanh)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:93:41: note: in definition of macro ‘VECTORIZED_MATH_1’
93 | inline sugar::Vectorized_INTSXP<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:40:26: note: suggested alternatives:
40 | VECTORIZED_MATH_1(tanh,::tanh)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:93:41: note: in definition of macro ‘VECTORIZED_MATH_1’
93 | inline sugar::Vectorized_INTSXP<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1250:5: note: ‘std::tanh’
1250 | tanh(const complex<_Tp>& __z) { return __complex_tanh(__z.__rep()); }
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:40:19: note: ‘Rcpp::tanh’
40 | VECTORIZED_MATH_1(tanh,::tanh)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:91:9: note: in definition of macro ‘VECTORIZED_MATH_1’
91 | __NAME__( SEXP x){ return __NAME__( NumericVector( x ) ) ; } \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:93:56: error: template argument 1 is invalid
93 | inline sugar::Vectorized_INTSXP<__SYMBOL__,NA,T> \
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:40:1: note: in expansion of macro ‘VECTORIZED_MATH_1’
40 | VECTORIZED_MATH_1(tanh,::tanh)
| ^~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h: In function ‘int Rcpp::tanh(const VectorBase<13, NA_, T>&)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:40:26: error: ‘::tanh’ has not been declared
40 | VECTORIZED_MATH_1(tanh,::tanh)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:95:49: note: in definition of macro ‘VECTORIZED_MATH_1’
95 | return sugar::Vectorized_INTSXP<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:40:26: note: suggested alternatives:
40 | VECTORIZED_MATH_1(tanh,::tanh)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:95:49: note: in definition of macro ‘VECTORIZED_MATH_1’
95 | return sugar::Vectorized_INTSXP<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1250:5: note: ‘std::tanh’
1250 | tanh(const complex<_Tp>& __z) { return __complex_tanh(__z.__rep()); }
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:40:19: note: ‘Rcpp::tanh’
40 | VECTORIZED_MATH_1(tanh,::tanh)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:94:9: note: in definition of macro ‘VECTORIZED_MATH_1’
94 | __NAME__( const VectorBase<INTSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:40:26: error: ‘::tanh’ has not been declared
40 | VECTORIZED_MATH_1(tanh,::tanh)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:95:49: note: in definition of macro ‘VECTORIZED_MATH_1’
95 | return sugar::Vectorized_INTSXP<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:40:26: note: suggested alternatives:
40 | VECTORIZED_MATH_1(tanh,::tanh)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:95:49: note: in definition of macro ‘VECTORIZED_MATH_1’
95 | return sugar::Vectorized_INTSXP<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1250:5: note: ‘std::tanh’
1250 | tanh(const complex<_Tp>& __z) { return __complex_tanh(__z.__rep()); }
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:40:19: note: ‘Rcpp::tanh’
40 | VECTORIZED_MATH_1(tanh,::tanh)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:94:9: note: in definition of macro ‘VECTORIZED_MATH_1’
94 | __NAME__( const VectorBase<INTSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:95:64: error: template argument 1 is invalid
95 | return sugar::Vectorized_INTSXP<__SYMBOL__,NA,T>( t ) ; \
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:40:1: note: in expansion of macro ‘VECTORIZED_MATH_1’
40 | VECTORIZED_MATH_1(tanh,::tanh)
| ^~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h: At global scope:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:42:25: error: ‘::fabs’ has not been declared; did you mean ‘std::fabs’?
42 | VECTORIZED_MATH_1(abs,::fabs)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:86:34: note: in definition of macro ‘VECTORIZED_MATH_1’
86 | inline sugar::Vectorized<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:2429:5: note: ‘std::fabs’ declared here
2429 | fabs(const std::complex<_Tp>& __z)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:42:25: error: ‘::fabs’ has not been declared; did you mean ‘std::fabs’?
42 | VECTORIZED_MATH_1(abs,::fabs)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:86:34: note: in definition of macro ‘VECTORIZED_MATH_1’
86 | inline sugar::Vectorized<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:2429:5: note: ‘std::fabs’ declared here
2429 | fabs(const std::complex<_Tp>& __z)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:86:49: error: template argument 1 is invalid
86 | inline sugar::Vectorized<__SYMBOL__,NA,T> \
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:42:1: note: in expansion of macro ‘VECTORIZED_MATH_1’
42 | VECTORIZED_MATH_1(abs,::fabs)
| ^~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h: In function ‘int Rcpp::abs(const VectorBase<14, NA_, T>&)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:42:25: error: ‘::fabs’ has not been declared; did you mean ‘std::fabs’?
42 | VECTORIZED_MATH_1(abs,::fabs)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:88:42: note: in definition of macro ‘VECTORIZED_MATH_1’
88 | return sugar::Vectorized<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:2429:5: note: ‘std::fabs’ declared here
2429 | fabs(const std::complex<_Tp>& __z)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:42:25: error: ‘::fabs’ has not been declared; did you mean ‘std::fabs’?
42 | VECTORIZED_MATH_1(abs,::fabs)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:88:42: note: in definition of macro ‘VECTORIZED_MATH_1’
88 | return sugar::Vectorized<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:2429:5: note: ‘std::fabs’ declared here
2429 | fabs(const std::complex<_Tp>& __z)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:88:57: error: template argument 1 is invalid
88 | return sugar::Vectorized<__SYMBOL__,NA,T>( t ) ; \
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:42:1: note: in expansion of macro ‘VECTORIZED_MATH_1’
42 | VECTORIZED_MATH_1(abs,::fabs)
| ^~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h: At global scope:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:42:25: error: ‘::fabs’ has not been declared; did you mean ‘std::fabs’?
42 | VECTORIZED_MATH_1(abs,::fabs)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:90:34: note: in definition of macro ‘VECTORIZED_MATH_1’
90 | inline sugar::Vectorized<__SYMBOL__,true,NumericVector> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:2429:5: note: ‘std::fabs’ declared here
2429 | fabs(const std::complex<_Tp>& __z)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:42:25: error: ‘::fabs’ has not been declared; did you mean ‘std::fabs’?
42 | VECTORIZED_MATH_1(abs,::fabs)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:90:34: note: in definition of macro ‘VECTORIZED_MATH_1’
90 | inline sugar::Vectorized<__SYMBOL__,true,NumericVector> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:2429:5: note: ‘std::fabs’ declared here
2429 | fabs(const std::complex<_Tp>& __z)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:90:63: error: template argument 1 is invalid
90 | inline sugar::Vectorized<__SYMBOL__,true,NumericVector> \
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:42:1: note: in expansion of macro ‘VECTORIZED_MATH_1’
42 | VECTORIZED_MATH_1(abs,::fabs)
| ^~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:42:25: error: ‘::fabs’ has not been declared; did you mean ‘std::fabs’?
42 | VECTORIZED_MATH_1(abs,::fabs)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:93:41: note: in definition of macro ‘VECTORIZED_MATH_1’
93 | inline sugar::Vectorized_INTSXP<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:2429:5: note: ‘std::fabs’ declared here
2429 | fabs(const std::complex<_Tp>& __z)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:42:25: error: ‘::fabs’ has not been declared; did you mean ‘std::fabs’?
42 | VECTORIZED_MATH_1(abs,::fabs)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:93:41: note: in definition of macro ‘VECTORIZED_MATH_1’
93 | inline sugar::Vectorized_INTSXP<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:2429:5: note: ‘std::fabs’ declared here
2429 | fabs(const std::complex<_Tp>& __z)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:93:56: error: template argument 1 is invalid
93 | inline sugar::Vectorized_INTSXP<__SYMBOL__,NA,T> \
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:42:1: note: in expansion of macro ‘VECTORIZED_MATH_1’
42 | VECTORIZED_MATH_1(abs,::fabs)
| ^~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h: In function ‘int Rcpp::abs(const VectorBase<13, NA_, T>&)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:42:25: error: ‘::fabs’ has not been declared; did you mean ‘std::fabs’?
42 | VECTORIZED_MATH_1(abs,::fabs)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:95:49: note: in definition of macro ‘VECTORIZED_MATH_1’
95 | return sugar::Vectorized_INTSXP<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:2429:5: note: ‘std::fabs’ declared here
2429 | fabs(const std::complex<_Tp>& __z)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:42:25: error: ‘::fabs’ has not been declared; did you mean ‘std::fabs’?
42 | VECTORIZED_MATH_1(abs,::fabs)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:95:49: note: in definition of macro ‘VECTORIZED_MATH_1’
95 | return sugar::Vectorized_INTSXP<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:2429:5: note: ‘std::fabs’ declared here
2429 | fabs(const std::complex<_Tp>& __z)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:95:64: error: template argument 1 is invalid
95 | return sugar::Vectorized_INTSXP<__SYMBOL__,NA,T>( t ) ; \
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:42:1: note: in expansion of macro ‘VECTORIZED_MATH_1’
42 | VECTORIZED_MATH_1(abs,::fabs)
| ^~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h: At global scope:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:50:34: error: ‘::expm1’ has not been declared; did you mean ‘std::expm1’?
50 | VECTORIZED_MATH_1(expm1 , ::expm1 )
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:86:34: note: in definition of macro ‘VECTORIZED_MATH_1’
86 | inline sugar::Vectorized<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2383:5: note: ‘std::expm1’ declared here
2383 | expm1(_Tp __x)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:50:34: error: ‘::expm1’ has not been declared; did you mean ‘std::expm1’?
50 | VECTORIZED_MATH_1(expm1 , ::expm1 )
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:86:34: note: in definition of macro ‘VECTORIZED_MATH_1’
86 | inline sugar::Vectorized<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2383:5: note: ‘std::expm1’ declared here
2383 | expm1(_Tp __x)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:86:49: error: template argument 1 is invalid
86 | inline sugar::Vectorized<__SYMBOL__,NA,T> \
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:50:1: note: in expansion of macro ‘VECTORIZED_MATH_1’
50 | VECTORIZED_MATH_1(expm1 , ::expm1 )
| ^~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h: In function ‘int Rcpp::expm1(const VectorBase<14, NA_, T>&)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:50:34: error: ‘::expm1’ has not been declared
50 | VECTORIZED_MATH_1(expm1 , ::expm1 )
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:88:42: note: in definition of macro ‘VECTORIZED_MATH_1’
88 | return sugar::Vectorized<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:50:34: note: suggested alternatives:
50 | VECTORIZED_MATH_1(expm1 , ::expm1 )
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:88:42: note: in definition of macro ‘VECTORIZED_MATH_1’
88 | return sugar::Vectorized<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2383:5: note: ‘std::expm1’
2383 | expm1(_Tp __x)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:50:19: note: ‘Rcpp::expm1’
50 | VECTORIZED_MATH_1(expm1 , ::expm1 )
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:87:9: note: in definition of macro ‘VECTORIZED_MATH_1’
87 | __NAME__( const VectorBase<REALSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:50:34: error: ‘::expm1’ has not been declared
50 | VECTORIZED_MATH_1(expm1 , ::expm1 )
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:88:42: note: in definition of macro ‘VECTORIZED_MATH_1’
88 | return sugar::Vectorized<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:50:34: note: suggested alternatives:
50 | VECTORIZED_MATH_1(expm1 , ::expm1 )
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:88:42: note: in definition of macro ‘VECTORIZED_MATH_1’
88 | return sugar::Vectorized<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2383:5: note: ‘std::expm1’
2383 | expm1(_Tp __x)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:50:19: note: ‘Rcpp::expm1’
50 | VECTORIZED_MATH_1(expm1 , ::expm1 )
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:87:9: note: in definition of macro ‘VECTORIZED_MATH_1’
87 | __NAME__( const VectorBase<REALSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:88:57: error: template argument 1 is invalid
88 | return sugar::Vectorized<__SYMBOL__,NA,T>( t ) ; \
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:50:1: note: in expansion of macro ‘VECTORIZED_MATH_1’
50 | VECTORIZED_MATH_1(expm1 , ::expm1 )
| ^~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h: At global scope:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:50:34: error: ‘::expm1’ has not been declared
50 | VECTORIZED_MATH_1(expm1 , ::expm1 )
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:90:34: note: in definition of macro ‘VECTORIZED_MATH_1’
90 | inline sugar::Vectorized<__SYMBOL__,true,NumericVector> \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:50:34: note: suggested alternatives:
50 | VECTORIZED_MATH_1(expm1 , ::expm1 )
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:90:34: note: in definition of macro ‘VECTORIZED_MATH_1’
90 | inline sugar::Vectorized<__SYMBOL__,true,NumericVector> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2383:5: note: ‘std::expm1’
2383 | expm1(_Tp __x)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:50:19: note: ‘Rcpp::expm1’
50 | VECTORIZED_MATH_1(expm1 , ::expm1 )
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:87:9: note: in definition of macro ‘VECTORIZED_MATH_1’
87 | __NAME__( const VectorBase<REALSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:50:34: error: ‘::expm1’ has not been declared
50 | VECTORIZED_MATH_1(expm1 , ::expm1 )
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:90:34: note: in definition of macro ‘VECTORIZED_MATH_1’
90 | inline sugar::Vectorized<__SYMBOL__,true,NumericVector> \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:50:34: note: suggested alternatives:
50 | VECTORIZED_MATH_1(expm1 , ::expm1 )
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:90:34: note: in definition of macro ‘VECTORIZED_MATH_1’
90 | inline sugar::Vectorized<__SYMBOL__,true,NumericVector> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2383:5: note: ‘std::expm1’
2383 | expm1(_Tp __x)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:50:19: note: ‘Rcpp::expm1’
50 | VECTORIZED_MATH_1(expm1 , ::expm1 )
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:87:9: note: in definition of macro ‘VECTORIZED_MATH_1’
87 | __NAME__( const VectorBase<REALSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:90:63: error: template argument 1 is invalid
90 | inline sugar::Vectorized<__SYMBOL__,true,NumericVector> \
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:50:1: note: in expansion of macro ‘VECTORIZED_MATH_1’
50 | VECTORIZED_MATH_1(expm1 , ::expm1 )
| ^~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:50:34: error: ‘::expm1’ has not been declared
50 | VECTORIZED_MATH_1(expm1 , ::expm1 )
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:93:41: note: in definition of macro ‘VECTORIZED_MATH_1’
93 | inline sugar::Vectorized_INTSXP<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:50:34: note: suggested alternatives:
50 | VECTORIZED_MATH_1(expm1 , ::expm1 )
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:93:41: note: in definition of macro ‘VECTORIZED_MATH_1’
93 | inline sugar::Vectorized_INTSXP<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2383:5: note: ‘std::expm1’
2383 | expm1(_Tp __x)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:50:19: note: ‘Rcpp::expm1’
50 | VECTORIZED_MATH_1(expm1 , ::expm1 )
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:91:9: note: in definition of macro ‘VECTORIZED_MATH_1’
91 | __NAME__( SEXP x){ return __NAME__( NumericVector( x ) ) ; } \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:50:34: error: ‘::expm1’ has not been declared
50 | VECTORIZED_MATH_1(expm1 , ::expm1 )
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:93:41: note: in definition of macro ‘VECTORIZED_MATH_1’
93 | inline sugar::Vectorized_INTSXP<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:50:34: note: suggested alternatives:
50 | VECTORIZED_MATH_1(expm1 , ::expm1 )
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:93:41: note: in definition of macro ‘VECTORIZED_MATH_1’
93 | inline sugar::Vectorized_INTSXP<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2383:5: note: ‘std::expm1’
2383 | expm1(_Tp __x)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:50:19: note: ‘Rcpp::expm1’
50 | VECTORIZED_MATH_1(expm1 , ::expm1 )
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:91:9: note: in definition of macro ‘VECTORIZED_MATH_1’
91 | __NAME__( SEXP x){ return __NAME__( NumericVector( x ) ) ; } \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:93:56: error: template argument 1 is invalid
93 | inline sugar::Vectorized_INTSXP<__SYMBOL__,NA,T> \
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:50:1: note: in expansion of macro ‘VECTORIZED_MATH_1’
50 | VECTORIZED_MATH_1(expm1 , ::expm1 )
| ^~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h: In function ‘int Rcpp::expm1(const VectorBase<13, NA_, T>&)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:50:34: error: ‘::expm1’ has not been declared
50 | VECTORIZED_MATH_1(expm1 , ::expm1 )
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:95:49: note: in definition of macro ‘VECTORIZED_MATH_1’
95 | return sugar::Vectorized_INTSXP<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:50:34: note: suggested alternatives:
50 | VECTORIZED_MATH_1(expm1 , ::expm1 )
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:95:49: note: in definition of macro ‘VECTORIZED_MATH_1’
95 | return sugar::Vectorized_INTSXP<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2383:5: note: ‘std::expm1’
2383 | expm1(_Tp __x)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:50:19: note: ‘Rcpp::expm1’
50 | VECTORIZED_MATH_1(expm1 , ::expm1 )
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:94:9: note: in definition of macro ‘VECTORIZED_MATH_1’
94 | __NAME__( const VectorBase<INTSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:50:34: error: ‘::expm1’ has not been declared
50 | VECTORIZED_MATH_1(expm1 , ::expm1 )
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:95:49: note: in definition of macro ‘VECTORIZED_MATH_1’
95 | return sugar::Vectorized_INTSXP<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:50:34: note: suggested alternatives:
50 | VECTORIZED_MATH_1(expm1 , ::expm1 )
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:95:49: note: in definition of macro ‘VECTORIZED_MATH_1’
95 | return sugar::Vectorized_INTSXP<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2383:5: note: ‘std::expm1’
2383 | expm1(_Tp __x)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:50:19: note: ‘Rcpp::expm1’
50 | VECTORIZED_MATH_1(expm1 , ::expm1 )
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:94:9: note: in definition of macro ‘VECTORIZED_MATH_1’
94 | __NAME__( const VectorBase<INTSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:95:64: error: template argument 1 is invalid
95 | return sugar::Vectorized_INTSXP<__SYMBOL__,NA,T>( t ) ; \
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:50:1: note: in expansion of macro ‘VECTORIZED_MATH_1’
50 | VECTORIZED_MATH_1(expm1 , ::expm1 )
| ^~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h: At global scope:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:51:34: error: ‘::log1p’ has not been declared; did you mean ‘std::log1p’?
51 | VECTORIZED_MATH_1(log1p , ::log1p )
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:86:34: note: in definition of macro ‘VECTORIZED_MATH_1’
86 | inline sugar::Vectorized<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2524:5: note: ‘std::log1p’ declared here
2524 | log1p(_Tp __x)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:51:34: error: ‘::log1p’ has not been declared; did you mean ‘std::log1p’?
51 | VECTORIZED_MATH_1(log1p , ::log1p )
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:86:34: note: in definition of macro ‘VECTORIZED_MATH_1’
86 | inline sugar::Vectorized<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2524:5: note: ‘std::log1p’ declared here
2524 | log1p(_Tp __x)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:86:49: error: template argument 1 is invalid
86 | inline sugar::Vectorized<__SYMBOL__,NA,T> \
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:51:1: note: in expansion of macro ‘VECTORIZED_MATH_1’
51 | VECTORIZED_MATH_1(log1p , ::log1p )
| ^~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h: In function ‘int Rcpp::log1p(const VectorBase<14, NA_, T>&)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:51:34: error: ‘::log1p’ has not been declared
51 | VECTORIZED_MATH_1(log1p , ::log1p )
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:88:42: note: in definition of macro ‘VECTORIZED_MATH_1’
88 | return sugar::Vectorized<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:51:34: note: suggested alternatives:
51 | VECTORIZED_MATH_1(log1p , ::log1p )
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:88:42: note: in definition of macro ‘VECTORIZED_MATH_1’
88 | return sugar::Vectorized<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2524:5: note: ‘std::log1p’
2524 | log1p(_Tp __x)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:51:19: note: ‘Rcpp::log1p’
51 | VECTORIZED_MATH_1(log1p , ::log1p )
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:87:9: note: in definition of macro ‘VECTORIZED_MATH_1’
87 | __NAME__( const VectorBase<REALSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:51:34: error: ‘::log1p’ has not been declared
51 | VECTORIZED_MATH_1(log1p , ::log1p )
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:88:42: note: in definition of macro ‘VECTORIZED_MATH_1’
88 | return sugar::Vectorized<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:51:34: note: suggested alternatives:
51 | VECTORIZED_MATH_1(log1p , ::log1p )
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:88:42: note: in definition of macro ‘VECTORIZED_MATH_1’
88 | return sugar::Vectorized<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2524:5: note: ‘std::log1p’
2524 | log1p(_Tp __x)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:51:19: note: ‘Rcpp::log1p’
51 | VECTORIZED_MATH_1(log1p , ::log1p )
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:87:9: note: in definition of macro ‘VECTORIZED_MATH_1’
87 | __NAME__( const VectorBase<REALSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:88:57: error: template argument 1 is invalid
88 | return sugar::Vectorized<__SYMBOL__,NA,T>( t ) ; \
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:51:1: note: in expansion of macro ‘VECTORIZED_MATH_1’
51 | VECTORIZED_MATH_1(log1p , ::log1p )
| ^~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h: At global scope:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:51:34: error: ‘::log1p’ has not been declared
51 | VECTORIZED_MATH_1(log1p , ::log1p )
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:90:34: note: in definition of macro ‘VECTORIZED_MATH_1’
90 | inline sugar::Vectorized<__SYMBOL__,true,NumericVector> \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:51:34: note: suggested alternatives:
51 | VECTORIZED_MATH_1(log1p , ::log1p )
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:90:34: note: in definition of macro ‘VECTORIZED_MATH_1’
90 | inline sugar::Vectorized<__SYMBOL__,true,NumericVector> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2524:5: note: ‘std::log1p’
2524 | log1p(_Tp __x)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:51:19: note: ‘Rcpp::log1p’
51 | VECTORIZED_MATH_1(log1p , ::log1p )
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:87:9: note: in definition of macro ‘VECTORIZED_MATH_1’
87 | __NAME__( const VectorBase<REALSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:51:34: error: ‘::log1p’ has not been declared
51 | VECTORIZED_MATH_1(log1p , ::log1p )
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:90:34: note: in definition of macro ‘VECTORIZED_MATH_1’
90 | inline sugar::Vectorized<__SYMBOL__,true,NumericVector> \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:51:34: note: suggested alternatives:
51 | VECTORIZED_MATH_1(log1p , ::log1p )
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:90:34: note: in definition of macro ‘VECTORIZED_MATH_1’
90 | inline sugar::Vectorized<__SYMBOL__,true,NumericVector> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2524:5: note: ‘std::log1p’
2524 | log1p(_Tp __x)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:51:19: note: ‘Rcpp::log1p’
51 | VECTORIZED_MATH_1(log1p , ::log1p )
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:87:9: note: in definition of macro ‘VECTORIZED_MATH_1’
87 | __NAME__( const VectorBase<REALSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:90:63: error: template argument 1 is invalid
90 | inline sugar::Vectorized<__SYMBOL__,true,NumericVector> \
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:51:1: note: in expansion of macro ‘VECTORIZED_MATH_1’
51 | VECTORIZED_MATH_1(log1p , ::log1p )
| ^~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:51:34: error: ‘::log1p’ has not been declared
51 | VECTORIZED_MATH_1(log1p , ::log1p )
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:93:41: note: in definition of macro ‘VECTORIZED_MATH_1’
93 | inline sugar::Vectorized_INTSXP<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:51:34: note: suggested alternatives:
51 | VECTORIZED_MATH_1(log1p , ::log1p )
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:93:41: note: in definition of macro ‘VECTORIZED_MATH_1’
93 | inline sugar::Vectorized_INTSXP<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2524:5: note: ‘std::log1p’
2524 | log1p(_Tp __x)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:51:19: note: ‘Rcpp::log1p’
51 | VECTORIZED_MATH_1(log1p , ::log1p )
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:91:9: note: in definition of macro ‘VECTORIZED_MATH_1’
91 | __NAME__( SEXP x){ return __NAME__( NumericVector( x ) ) ; } \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:51:34: error: ‘::log1p’ has not been declared
51 | VECTORIZED_MATH_1(log1p , ::log1p )
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:93:41: note: in definition of macro ‘VECTORIZED_MATH_1’
93 | inline sugar::Vectorized_INTSXP<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:51:34: note: suggested alternatives:
51 | VECTORIZED_MATH_1(log1p , ::log1p )
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:93:41: note: in definition of macro ‘VECTORIZED_MATH_1’
93 | inline sugar::Vectorized_INTSXP<__SYMBOL__,NA,T> \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2524:5: note: ‘std::log1p’
2524 | log1p(_Tp __x)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:51:19: note: ‘Rcpp::log1p’
51 | VECTORIZED_MATH_1(log1p , ::log1p )
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:91:9: note: in definition of macro ‘VECTORIZED_MATH_1’
91 | __NAME__( SEXP x){ return __NAME__( NumericVector( x ) ) ; } \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:93:56: error: template argument 1 is invalid
93 | inline sugar::Vectorized_INTSXP<__SYMBOL__,NA,T> \
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:51:1: note: in expansion of macro ‘VECTORIZED_MATH_1’
51 | VECTORIZED_MATH_1(log1p , ::log1p )
| ^~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h: In function ‘int Rcpp::log1p(const VectorBase<13, NA_, T>&)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:51:34: error: ‘::log1p’ has not been declared
51 | VECTORIZED_MATH_1(log1p , ::log1p )
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:95:49: note: in definition of macro ‘VECTORIZED_MATH_1’
95 | return sugar::Vectorized_INTSXP<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:51:34: note: suggested alternatives:
51 | VECTORIZED_MATH_1(log1p , ::log1p )
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:95:49: note: in definition of macro ‘VECTORIZED_MATH_1’
95 | return sugar::Vectorized_INTSXP<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2524:5: note: ‘std::log1p’
2524 | log1p(_Tp __x)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:51:19: note: ‘Rcpp::log1p’
51 | VECTORIZED_MATH_1(log1p , ::log1p )
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:94:9: note: in definition of macro ‘VECTORIZED_MATH_1’
94 | __NAME__( const VectorBase<INTSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:51:34: error: ‘::log1p’ has not been declared
51 | VECTORIZED_MATH_1(log1p , ::log1p )
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:95:49: note: in definition of macro ‘VECTORIZED_MATH_1’
95 | return sugar::Vectorized_INTSXP<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:51:34: note: suggested alternatives:
51 | VECTORIZED_MATH_1(log1p , ::log1p )
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:95:49: note: in definition of macro ‘VECTORIZED_MATH_1’
95 | return sugar::Vectorized_INTSXP<__SYMBOL__,NA,T>( t ) ; \
| ^~~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2524:5: note: ‘std::log1p’
2524 | log1p(_Tp __x)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:51:19: note: ‘Rcpp::log1p’
51 | VECTORIZED_MATH_1(log1p , ::log1p )
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:94:9: note: in definition of macro ‘VECTORIZED_MATH_1’
94 | __NAME__( const VectorBase<INTSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:95:64: error: template argument 1 is invalid
95 | return sugar::Vectorized_INTSXP<__SYMBOL__,NA,T>( t ) ; \
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:51:1: note: in expansion of macro ‘VECTORIZED_MATH_1’
51 | VECTORIZED_MATH_1(log1p , ::log1p )
| ^~~~~~~~~~~~~~~~~
In file included from /home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/functions.h:32,
from /home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/sugar.h:31:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h: In function ‘double Rcpp::internal::complex__Mod(Rcomplex)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:58:51: error: ‘::sqrt’ has not been declared
58 | inline double complex__Mod( Rcomplex x){ return ::sqrt( x.i * x.i + x.r * x.r) ; }
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:58:51: note: suggested alternatives:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1195:5: note: ‘std::sqrt’
1195 | sqrt(const complex<_Tp>& __z) { return __complex_sqrt(__z.__rep()); }
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:36:19: note: ‘Rcpp::sqrt’
36 | VECTORIZED_MATH_1(sqrt,::sqrt)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:94:9: note: in definition of macro ‘VECTORIZED_MATH_1’
94 | __NAME__( const VectorBase<INTSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h: In function ‘double Rcpp::internal::complex__Arg(Rcomplex)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:65:52: error: ‘::atan2’ has not been declared; did you mean ‘std::atan2’?
65 | inline double complex__Arg( Rcomplex x ){ return ::atan2(x.i, x.r); }
| ^~~~~
| std::atan2
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:1056:5: note: ‘std::atan2’ declared here
1056 | atan2(_Tp __y, _Up __x)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h: In function ‘Rcomplex Rcpp::internal::complex__exp(Rcomplex)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:69:21: error: ‘::exp’ has not been declared
69 | double expx = ::exp(x.r);
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:69:21: note: suggested alternatives:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1059:5: note: ‘std::exp’
1059 | exp(const complex<_Tp>& __z) { return __complex_exp(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:25:19: note: ‘Rcpp::exp’
25 | VECTORIZED_MATH_1(exp,::exp)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:94:9: note: in definition of macro ‘VECTORIZED_MATH_1’
94 | __NAME__( const VectorBase<INTSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:70:20: error: ‘::cos’ has not been declared
70 | y.r = expx * ::cos(x.i);
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:70:20: note: suggested alternatives:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1003:5: note: ‘std::cos’
1003 | cos(const complex<_Tp>& __z) { return __complex_cos(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:31:19: note: ‘Rcpp::cos’
31 | VECTORIZED_MATH_1(cos,::cos)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:94:9: note: in definition of macro ‘VECTORIZED_MATH_1’
94 | __NAME__( const VectorBase<INTSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:71:20: error: ‘::sin’ has not been declared
71 | y.i = expx * ::sin(x.i);
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:71:20: note: suggested alternatives:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1121:5: note: ‘std::sin’
1121 | sin(const complex<_Tp>& __z) { return __complex_sin(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:37:19: note: ‘Rcpp::sin’
37 | VECTORIZED_MATH_1(sin,::sin)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:94:9: note: in definition of macro ‘VECTORIZED_MATH_1’
94 | __NAME__( const VectorBase<INTSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h: In function ‘Rcomplex Rcpp::internal::complex__log(Rcomplex)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:76:13: error: ‘::atan2’ has not been declared; did you mean ‘std::atan2’?
76 | y.i = ::atan2(x.i, x.r);
| ^~~~~
| std::atan2
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:1056:5: note: ‘std::atan2’ declared here
1056 | atan2(_Tp __y, _Up __x)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:77:13: error: ‘::log’ has not been declared
77 | y.r = ::log(::hypot(x.r, x.i));
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:77:13: note: suggested alternatives:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1086:5: note: ‘std::log’
1086 | log(const complex<_Tp>& __z) { return __complex_log(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:34:19: note: ‘Rcpp::log’
34 | VECTORIZED_MATH_1(log,::log)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:94:9: note: in definition of macro ‘VECTORIZED_MATH_1’
94 | __NAME__( const VectorBase<INTSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:77:19: error: ‘::hypot’ has not been declared; did you mean ‘std::hypot’?
77 | y.r = ::log(::hypot(x.r, x.i));
| ^~~~~
| std::hypot
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:3708:5: note: ‘std::hypot’ declared here
3708 | hypot(_Tp __x, _Up __y)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h: In function ‘Rcomplex Rcpp::internal::complex__sqrt(Rcomplex)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:84:18: error: ‘::hypot’ has not been declared; did you mean ‘std::hypot’?
84 | if( (mag = ::hypot(z.r, z.i)) == 0.0)
| ^~~~~
| std::hypot
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:3708:5: note: ‘std::hypot’ declared here
3708 | hypot(_Tp __x, _Up __y)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:87:17: error: ‘::sqrt’ has not been declared
87 | r.r = ::sqrt(0.5 * (mag + z.r) );
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:87:17: note: suggested alternatives:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1195:5: note: ‘std::sqrt’
1195 | sqrt(const complex<_Tp>& __z) { return __complex_sqrt(__z.__rep()); }
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:36:19: note: ‘Rcpp::sqrt’
36 | VECTORIZED_MATH_1(sqrt,::sqrt)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:94:9: note: in definition of macro ‘VECTORIZED_MATH_1’
94 | __NAME__( const VectorBase<INTSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:91:17: error: ‘::sqrt’ has not been declared
91 | r.i = ::sqrt(0.5 * (mag - z.r) );
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:91:17: note: suggested alternatives:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1195:5: note: ‘std::sqrt’
1195 | sqrt(const complex<_Tp>& __z) { return __complex_sqrt(__z.__rep()); }
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:36:19: note: ‘Rcpp::sqrt’
36 | VECTORIZED_MATH_1(sqrt,::sqrt)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:94:9: note: in definition of macro ‘VECTORIZED_MATH_1’
94 | __NAME__( const VectorBase<INTSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h: In function ‘Rcomplex Rcpp::internal::complex__cos(Rcomplex)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:100:13: error: ‘::cos’ has not been declared
100 | r.r = ::cos(z.r) * ::cosh(z.i);
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:100:13: note: suggested alternatives:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1003:5: note: ‘std::cos’
1003 | cos(const complex<_Tp>& __z) { return __complex_cos(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:31:19: note: ‘Rcpp::cos’
31 | VECTORIZED_MATH_1(cos,::cos)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:94:9: note: in definition of macro ‘VECTORIZED_MATH_1’
94 | __NAME__( const VectorBase<INTSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:100:26: error: ‘::cosh’ has not been declared
100 | r.r = ::cos(z.r) * ::cosh(z.i);
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:100:26: note: suggested alternatives:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1033:5: note: ‘std::cosh’
1033 | cosh(const complex<_Tp>& __z) { return __complex_cosh(__z.__rep()); }
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:32:19: note: ‘Rcpp::cosh’
32 | VECTORIZED_MATH_1(cosh,::cosh)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:94:9: note: in definition of macro ‘VECTORIZED_MATH_1’
94 | __NAME__( const VectorBase<INTSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:101:15: error: ‘::sin’ has not been declared
101 | r.i = - ::sin(z.r) * ::sinh(z.i);
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:101:15: note: suggested alternatives:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1121:5: note: ‘std::sin’
1121 | sin(const complex<_Tp>& __z) { return __complex_sin(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:37:19: note: ‘Rcpp::sin’
37 | VECTORIZED_MATH_1(sin,::sin)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:94:9: note: in definition of macro ‘VECTORIZED_MATH_1’
94 | __NAME__( const VectorBase<INTSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:101:28: error: ‘::sinh’ has not been declared
101 | r.i = - ::sin(z.r) * ::sinh(z.i);
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:101:28: note: suggested alternatives:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1151:5: note: ‘std::sinh’
1151 | sinh(const complex<_Tp>& __z) { return __complex_sinh(__z.__rep()); }
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:38:19: note: ‘Rcpp::sinh’
38 | VECTORIZED_MATH_1(sinh,::sinh)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:94:9: note: in definition of macro ‘VECTORIZED_MATH_1’
94 | __NAME__( const VectorBase<INTSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h: In function ‘Rcomplex Rcpp::internal::complex__cosh(Rcomplex)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:106:13: error: ‘::cos’ has not been declared
106 | r.r = ::cos(-z.i) * ::cosh( z.r);
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:106:13: note: suggested alternatives:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1003:5: note: ‘std::cos’
1003 | cos(const complex<_Tp>& __z) { return __complex_cos(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:31:19: note: ‘Rcpp::cos’
31 | VECTORIZED_MATH_1(cos,::cos)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:94:9: note: in definition of macro ‘VECTORIZED_MATH_1’
94 | __NAME__( const VectorBase<INTSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:106:27: error: ‘::cosh’ has not been declared
106 | r.r = ::cos(-z.i) * ::cosh( z.r);
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:106:27: note: suggested alternatives:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1033:5: note: ‘std::cosh’
1033 | cosh(const complex<_Tp>& __z) { return __complex_cosh(__z.__rep()); }
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:32:19: note: ‘Rcpp::cosh’
32 | VECTORIZED_MATH_1(cosh,::cosh)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:94:9: note: in definition of macro ‘VECTORIZED_MATH_1’
94 | __NAME__( const VectorBase<INTSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:107:15: error: ‘::sin’ has not been declared
107 | r.i = - ::sin(-z.i) * ::sinh(z.r);
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:107:15: note: suggested alternatives:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1121:5: note: ‘std::sin’
1121 | sin(const complex<_Tp>& __z) { return __complex_sin(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:37:19: note: ‘Rcpp::sin’
37 | VECTORIZED_MATH_1(sin,::sin)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:94:9: note: in definition of macro ‘VECTORIZED_MATH_1’
94 | __NAME__( const VectorBase<INTSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:107:29: error: ‘::sinh’ has not been declared
107 | r.i = - ::sin(-z.i) * ::sinh(z.r);
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:107:29: note: suggested alternatives:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1151:5: note: ‘std::sinh’
1151 | sinh(const complex<_Tp>& __z) { return __complex_sinh(__z.__rep()); }
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:38:19: note: ‘Rcpp::sinh’
38 | VECTORIZED_MATH_1(sinh,::sinh)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:94:9: note: in definition of macro ‘VECTORIZED_MATH_1’
94 | __NAME__( const VectorBase<INTSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h: In function ‘Rcomplex Rcpp::internal::complex__sin(Rcomplex)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:112:13: error: ‘::sin’ has not been declared
112 | r.r = ::sin(z.r) * ::cosh(z.i);
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:112:13: note: suggested alternatives:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1121:5: note: ‘std::sin’
1121 | sin(const complex<_Tp>& __z) { return __complex_sin(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:37:19: note: ‘Rcpp::sin’
37 | VECTORIZED_MATH_1(sin,::sin)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:94:9: note: in definition of macro ‘VECTORIZED_MATH_1’
94 | __NAME__( const VectorBase<INTSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:112:26: error: ‘::cosh’ has not been declared
112 | r.r = ::sin(z.r) * ::cosh(z.i);
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:112:26: note: suggested alternatives:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1033:5: note: ‘std::cosh’
1033 | cosh(const complex<_Tp>& __z) { return __complex_cosh(__z.__rep()); }
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:32:19: note: ‘Rcpp::cosh’
32 | VECTORIZED_MATH_1(cosh,::cosh)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:94:9: note: in definition of macro ‘VECTORIZED_MATH_1’
94 | __NAME__( const VectorBase<INTSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:113:13: error: ‘::cos’ has not been declared
113 | r.i = ::cos(z.r) * ::sinh(z.i);
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:113:13: note: suggested alternatives:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1003:5: note: ‘std::cos’
1003 | cos(const complex<_Tp>& __z) { return __complex_cos(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:31:19: note: ‘Rcpp::cos’
31 | VECTORIZED_MATH_1(cos,::cos)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:94:9: note: in definition of macro ‘VECTORIZED_MATH_1’
94 | __NAME__( const VectorBase<INTSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:113:26: error: ‘::sinh’ has not been declared
113 | r.i = ::cos(z.r) * ::sinh(z.i);
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:113:26: note: suggested alternatives:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1151:5: note: ‘std::sinh’
1151 | sinh(const complex<_Tp>& __z) { return __complex_sinh(__z.__rep()); }
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:38:19: note: ‘Rcpp::sinh’
38 | VECTORIZED_MATH_1(sinh,::sinh)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:94:9: note: in definition of macro ‘VECTORIZED_MATH_1’
94 | __NAME__( const VectorBase<INTSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h: In function ‘Rcomplex Rcpp::internal::complex__tan(Rcomplex)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:121:13: error: ‘::cos’ has not been declared
121 | den = ::cos(x2) + ::cosh(y2);
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:121:13: note: suggested alternatives:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1003:5: note: ‘std::cos’
1003 | cos(const complex<_Tp>& __z) { return __complex_cos(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:31:19: note: ‘Rcpp::cos’
31 | VECTORIZED_MATH_1(cos,::cos)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:94:9: note: in definition of macro ‘VECTORIZED_MATH_1’
94 | __NAME__( const VectorBase<INTSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:121:25: error: ‘::cosh’ has not been declared
121 | den = ::cos(x2) + ::cosh(y2);
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:121:25: note: suggested alternatives:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1033:5: note: ‘std::cosh’
1033 | cosh(const complex<_Tp>& __z) { return __complex_cosh(__z.__rep()); }
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:32:19: note: ‘Rcpp::cosh’
32 | VECTORIZED_MATH_1(cosh,::cosh)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:94:9: note: in definition of macro ‘VECTORIZED_MATH_1’
94 | __NAME__( const VectorBase<INTSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:122:13: error: ‘::sin’ has not been declared
122 | r.r = ::sin(x2)/den;
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:122:13: note: suggested alternatives:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1121:5: note: ‘std::sin’
1121 | sin(const complex<_Tp>& __z) { return __complex_sin(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:37:19: note: ‘Rcpp::sin’
37 | VECTORIZED_MATH_1(sin,::sin)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:94:9: note: in definition of macro ‘VECTORIZED_MATH_1’
94 | __NAME__( const VectorBase<INTSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:125:24: error: ‘::fabs’ has not been declared; did you mean ‘std::fabs’?
125 | if (ISNAN(y2) || ::fabs(y2) < 50.0)
| ^~~~
| std::fabs
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:2429:5: note: ‘std::fabs’ declared here
2429 | fabs(const std::complex<_Tp>& __z)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:126:17: error: ‘::sinh’ has not been declared
126 | r.i = ::sinh(y2)/den;
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:126:17: note: suggested alternatives:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1151:5: note: ‘std::sinh’
1151 | sinh(const complex<_Tp>& __z) { return __complex_sinh(__z.__rep()); }
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:38:19: note: ‘Rcpp::sinh’
38 | VECTORIZED_MATH_1(sinh,::sinh)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:94:9: note: in definition of macro ‘VECTORIZED_MATH_1’
94 | __NAME__( const VectorBase<INTSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h: In function ‘Rcomplex Rcpp::internal::complex__asin(Rcomplex)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:138:18: error: ‘::hypot’ has not been declared; did you mean ‘std::hypot’?
138 | t1 = 0.5 * ::hypot(x + 1, y);
| ^~~~~
| std::hypot
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:3708:5: note: ‘std::hypot’ declared here
3708 | hypot(_Tp __x, _Up __y)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:139:18: error: ‘::hypot’ has not been declared; did you mean ‘std::hypot’?
139 | t2 = 0.5 * ::hypot(x - 1, y);
| ^~~~~
| std::hypot
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:3708:5: note: ‘std::hypot’ declared here
3708 | hypot(_Tp __x, _Up __y)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:142:13: error: ‘::asin’ has not been declared
142 | r.r = ::asin(bet);
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:142:13: note: suggested alternatives:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:2249:5: note: ‘std::asin’
2249 | asin(const std::complex<_Tp>& __z)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:27:19: note: ‘Rcpp::asin’
27 | VECTORIZED_MATH_1(asin,::asin)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:94:9: note: in definition of macro ‘VECTORIZED_MATH_1’
94 | __NAME__( const VectorBase<INTSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:143:13: error: ‘::log’ has not been declared
143 | r.i = ::log(alpha + ::sqrt(alpha*alpha - 1));
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:143:13: note: suggested alternatives:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1086:5: note: ‘std::log’
1086 | log(const complex<_Tp>& __z) { return __complex_log(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:34:19: note: ‘Rcpp::log’
34 | VECTORIZED_MATH_1(log,::log)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:94:9: note: in definition of macro ‘VECTORIZED_MATH_1’
94 | __NAME__( const VectorBase<INTSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:143:27: error: ‘::sqrt’ has not been declared
143 | r.i = ::log(alpha + ::sqrt(alpha*alpha - 1));
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:143:27: note: suggested alternatives:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1195:5: note: ‘std::sqrt’
1195 | sqrt(const complex<_Tp>& __z) { return __complex_sqrt(__z.__rep()); }
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:36:19: note: ‘Rcpp::sqrt’
36 | VECTORIZED_MATH_1(sqrt,::sqrt)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:94:9: note: in definition of macro ‘VECTORIZED_MATH_1’
94 | __NAME__( const VectorBase<INTSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h: In function ‘Rcomplex Rcpp::internal::complex__atan(Rcomplex)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:170:19: error: ‘::atan’ has not been declared
170 | r.r = 0.5 * ::atan(2 * x / ( 1 - x * x - y * y));
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:170:19: note: suggested alternatives:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:2293:5: note: ‘std::atan’
2293 | atan(const std::complex<_Tp>& __z)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:28:19: note: ‘Rcpp::atan’
28 | VECTORIZED_MATH_1(atan,::atan)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:94:9: note: in definition of macro ‘VECTORIZED_MATH_1’
94 | __NAME__( const VectorBase<INTSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:171:20: error: ‘::log’ has not been declared
171 | r.i = 0.25 * ::log((x * x + (y + 1) * (y + 1)) /
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:171:20: note: suggested alternatives:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1086:5: note: ‘std::log’
1086 | log(const complex<_Tp>& __z) { return __complex_log(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:34:19: note: ‘Rcpp::log’
34 | VECTORIZED_MATH_1(log,::log)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:94:9: note: in definition of macro ‘VECTORIZED_MATH_1’
94 | __NAME__( const VectorBase<INTSXP,NA,T>& t ){ \
| ^~~~~~~~
In file included from /home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/functions.h:41:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/seq_along.h: At global scope:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/seq_along.h:48:37: error: ‘size_t’ does not name a type
48 | inline sugar::SeqLen seq_len( const size_t& n){
| ^~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/seq_along.h:1:1: note: ‘size_t’ is defined in header ‘<cstddef>’; this is probably fixable by adding ‘#include <cstddef>’
+++ |+#include <cstddef>
1 | // -*- mode: C++; c-indent-level: 4; c-basic-offset: 4; tab-width: 8 -*-
In file included from /home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/functions.h:54:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/pow.h: In member function ‘double Rcpp::sugar::Pow<RTYPE, NA, T, EXPONENT_TYPE>::operator[](R_xlen_t) const’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/pow.h:36:22: error: ‘::pow’ has not been declared; did you mean ‘std::pow’?
36 | return ::pow( object[i], op );
| ^~~
| std::pow
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:2482:5: note: ‘std::pow’ declared here
2482 | pow(const std::complex<_Tp>& __x, const std::complex<_Up>& __y)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/pow.h: In member function ‘double Rcpp::sugar::Pow<13, NA, T, EXPONENT_TYPE>::operator[](R_xlen_t) const’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/pow.h:52:53: error: ‘::pow’ has not been declared; did you mean ‘std::pow’?
52 | return x == NA_INTEGER ? NA_INTEGER : ::pow( x, op );
| ^~~
| std::pow
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:2482:5: note: ‘std::pow’ declared here
2482 | pow(const std::complex<_Tp>& __x, const std::complex<_Up>& __y)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/pow.h: In member function ‘double Rcpp::sugar::Pow<13, false, T, EXPONENT_TYPE>::operator[](R_xlen_t) const’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/pow.h:66:22: error: ‘::pow’ has not been declared; did you mean ‘std::pow’?
66 | return ::pow( object[i], op );
| ^~~
| std::pow
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:2482:5: note: ‘std::pow’ declared here
2482 | pow(const std::complex<_Tp>& __x, const std::complex<_Up>& __y)
| ^~~
In file included from /home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/functions.h:65:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/sd.h: In member function ‘Rcpp::sugar::Sd<RTYPE, NA, T>::STORAGE Rcpp::sugar::Sd<RTYPE, NA, T>::get() const’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/sd.h:37:22: error: ‘::sqrt’ has not been declared
37 | return ::sqrt( var(object).get() ) ;
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/sd.h:37:22: note: suggested alternatives:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1195:5: note: ‘std::sqrt’
1195 | sqrt(const complex<_Tp>& __z) { return __complex_sqrt(__z.__rep()); }
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:246:21: note: ‘Rcpp::sqrt’
246 | RCPP_SUGAR_COMPLEX( sqrt, Rcomplex )
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:234:5: note: in definition of macro ‘RCPP_SUGAR_COMPLEX’
234 | __NAME__(const VectorBase<CPLXSXP,NA,T>& t) { \
| ^~~~~~~~
In file included from /home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/functions.h:70:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/unique.h: At global scope:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/unique.h:46:20: error: ‘IndexHash’ in namespace ‘Rcpp::sugar’ does not name a template type
46 | typedef sugar::IndexHash<RTYPE> HASH ;
| ^~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/unique.h:47:5: error: ‘HASH’ does not name a type
47 | HASH hash ;
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/unique.h: In constructor ‘Rcpp::sugar::In<RTYPE, TABLE_T>::In(const TABLE_T&)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/unique.h:50:45: error: class ‘Rcpp::sugar::In<RTYPE, TABLE_T>’ does not have any field named ‘hash’
50 | In( const TABLE_T& table) : vec(table), hash(vec){
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/unique.h:51:9: error: ‘hash’ was not declared in this scope; did you mean ‘std::hash’?
51 | hash.fill() ;
| ^~~~
| std::hash
In file included from /opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/hashtable_policy.h:35,
from /opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/hashtable.h:35,
from /opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/unordered_map.h:33,
from /opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/unordered_map:41,
from /home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/platform/compiler.h:39:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/functional_hash.h:59:12: note: ‘std::hash’ declared here
59 | struct hash;
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/unique.h: In member function ‘Rcpp::LogicalVector Rcpp::sugar::In<RTYPE, TABLE_T>::get(const T&) const’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/unique.h:56:57: error: ‘HASH’ was not declared in this scope
56 | return LogicalVector( x.begin(), x.end(), InSet<HASH>(hash) ) ;
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/unique.h:56:61: error: template argument 1 is invalid
56 | return LogicalVector( x.begin(), x.end(), InSet<HASH>(hash) ) ;
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/unique.h:56:63: error: ‘hash’ was not declared in this scope; did you mean ‘std::hash’?
56 | return LogicalVector( x.begin(), x.end(), InSet<HASH>(hash) ) ;
| ^~~~
| std::hash
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/functional_hash.h:59:12: note: ‘std::hash’ declared here
59 | struct hash;
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/unique.h: In function ‘Rcpp::Vector<RTYPE, Rcpp::PreserveStorage> Rcpp::unique(const VectorBase<RHS_RTYPE, RHS_NA, RHS_T>&)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/unique.h:67:16: error: ‘IndexHash’ is not a member of ‘Rcpp::sugar’
67 | sugar::IndexHash<RTYPE> hash(vec) ;
| ^~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/unique.h:68:9: error: ‘hash’ was not declared in this scope; did you mean ‘std::hash’?
68 | hash.fill() ;
| ^~~~
| std::hash
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/functional_hash.h:59:12: note: ‘std::hash’ declared here
59 | struct hash;
| ^~~~
In file included from /home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/functions.h:71:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/match.h: In function ‘Rcpp::IntegerVector Rcpp::match(const VectorBase<RHS_RTYPE, RHS_NA, RHS_T>&, const VectorBase<RTYPE, RHS_NA, RHS_T>&)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/match.h:30:19: error: ‘IndexHash’ is not a member of ‘Rcpp::sugar’
30 | return sugar::IndexHash<RTYPE>( table ).fill().lookup( x.get_ref() ) ;
| ^~~~~~~~~
In file included from /home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/functions.h:73:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/duplicated.h: In function ‘Rcpp::LogicalVector Rcpp::duplicated(const VectorBase<RHS_RTYPE, RHS_NA, RHS_T>&)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/duplicated.h:30:12: error: ‘IndexHash’ is not a member of ‘Rcpp::sugar’
30 | sugar::IndexHash<RTYPE> hash(vec) ;
| ^~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/duplicated.h:31:12: error: ‘hash’ was not declared in this scope; did you mean ‘std::hash’?
31 | return hash.fill_and_get_duplicated() ;
| ^~~~
| std::hash
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/bits/functional_hash.h:59:12: note: ‘std::hash’ declared here
59 | struct hash;
| ^~~~
In file included from /home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/dpq/dpq.h:25,
from /home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/stats.h:25,
from /home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp.h:80:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/unif.h: In function ‘double Rcpp::stats::punif_0(double, int, int)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/dpq/macros.h:36:37: error: ‘::log’ has not been declared
36 | #define R_D_val(x) (log_p ? ::log(x) : (x)) /* x in pF(x,..) */
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/unif.h:60:28: note: in expansion of macro ‘R_D_val’
60 | if (lower_tail) return R_D_val(x);
| ^~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/dpq/macros.h:36:37: note: suggested alternatives:
36 | #define R_D_val(x) (log_p ? ::log(x) : (x)) /* x in pF(x,..) */
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/unif.h:60:28: note: in expansion of macro ‘R_D_val’
60 | if (lower_tail) return R_D_val(x);
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1086:5: note: ‘std::log’
1086 | log(const complex<_Tp>& __z) { return __complex_log(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:245:21: note: ‘Rcpp::log’
245 | RCPP_SUGAR_COMPLEX( log, Rcomplex )
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:234:5: note: in definition of macro ‘RCPP_SUGAR_COMPLEX’
234 | __NAME__(const VectorBase<CPLXSXP,NA,T>& t) { \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/dpq/macros.h:36:37: error: ‘::log’ has not been declared
36 | #define R_D_val(x) (log_p ? ::log(x) : (x)) /* x in pF(x,..) */
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/unif.h:61:17: note: in expansion of macro ‘R_D_val’
61 | else return R_D_val(1-x);
| ^~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/dpq/macros.h:36:37: note: suggested alternatives:
36 | #define R_D_val(x) (log_p ? ::log(x) : (x)) /* x in pF(x,..) */
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/unif.h:61:17: note: in expansion of macro ‘R_D_val’
61 | else return R_D_val(1-x);
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1086:5: note: ‘std::log’
1086 | log(const complex<_Tp>& __z) { return __complex_log(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:245:21: note: ‘Rcpp::log’
245 | RCPP_SUGAR_COMPLEX( log, Rcomplex )
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:234:5: note: in definition of macro ‘RCPP_SUGAR_COMPLEX’
234 | __NAME__(const VectorBase<CPLXSXP,NA,T>& t) { \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/unif.h: In function ‘double Rcpp::stats::qunif_1(double, double, int, int)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/dpq/macros.h:52:50: error: ‘::exp’ has not been declared
52 | #define R_DT_qIv(p) (log_p ? (lower_tail ? ::exp(p) : - ::expm1(p)) \
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/unif.h:76:16: note: in expansion of macro ‘R_DT_qIv’
76 | return a + R_DT_qIv(p) * (1.0 - a);
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/dpq/macros.h:52:50: note: suggested alternatives:
52 | #define R_DT_qIv(p) (log_p ? (lower_tail ? ::exp(p) : - ::expm1(p)) \
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/unif.h:76:16: note: in expansion of macro ‘R_DT_qIv’
76 | return a + R_DT_qIv(p) * (1.0 - a);
| ^~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1059:5: note: ‘std::exp’
1059 | exp(const complex<_Tp>& __z) { return __complex_exp(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:244:21: note: ‘Rcpp::exp’
244 | RCPP_SUGAR_COMPLEX( exp, Rcomplex )
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:234:5: note: in definition of macro ‘RCPP_SUGAR_COMPLEX’
234 | __NAME__(const VectorBase<CPLXSXP,NA,T>& t) { \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/dpq/macros.h:52:63: error: ‘::expm1’ has not been declared
52 | #define R_DT_qIv(p) (log_p ? (lower_tail ? ::exp(p) : - ::expm1(p)) \
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/unif.h:76:16: note: in expansion of macro ‘R_DT_qIv’
76 | return a + R_DT_qIv(p) * (1.0 - a);
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/dpq/macros.h:52:63: note: suggested alternatives:
52 | #define R_DT_qIv(p) (log_p ? (lower_tail ? ::exp(p) : - ::expm1(p)) \
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/unif.h:76:16: note: in expansion of macro ‘R_DT_qIv’
76 | return a + R_DT_qIv(p) * (1.0 - a);
| ^~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2383:5: note: ‘std::expm1’
2383 | expm1(_Tp __x)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:50:19: note: ‘Rcpp::expm1’
50 | VECTORIZED_MATH_1(expm1 , ::expm1 )
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:94:9: note: in definition of macro ‘VECTORIZED_MATH_1’
94 | __NAME__( const VectorBase<INTSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/unif.h: In function ‘double Rcpp::stats::qunif_0(double, int, int)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/dpq/macros.h:52:50: error: ‘::exp’ has not been declared
52 | #define R_DT_qIv(p) (log_p ? (lower_tail ? ::exp(p) : - ::expm1(p)) \
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/unif.h:87:12: note: in expansion of macro ‘R_DT_qIv’
87 | return R_DT_qIv(p) ;
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/dpq/macros.h:52:50: note: suggested alternatives:
52 | #define R_DT_qIv(p) (log_p ? (lower_tail ? ::exp(p) : - ::expm1(p)) \
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/unif.h:87:12: note: in expansion of macro ‘R_DT_qIv’
87 | return R_DT_qIv(p) ;
| ^~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1059:5: note: ‘std::exp’
1059 | exp(const complex<_Tp>& __z) { return __complex_exp(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:244:21: note: ‘Rcpp::exp’
244 | RCPP_SUGAR_COMPLEX( exp, Rcomplex )
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:234:5: note: in definition of macro ‘RCPP_SUGAR_COMPLEX’
234 | __NAME__(const VectorBase<CPLXSXP,NA,T>& t) { \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/dpq/macros.h:52:63: error: ‘::expm1’ has not been declared
52 | #define R_DT_qIv(p) (log_p ? (lower_tail ? ::exp(p) : - ::expm1(p)) \
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/unif.h:87:12: note: in expansion of macro ‘R_DT_qIv’
87 | return R_DT_qIv(p) ;
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/dpq/macros.h:52:63: note: suggested alternatives:
52 | #define R_DT_qIv(p) (log_p ? (lower_tail ? ::exp(p) : - ::expm1(p)) \
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/unif.h:87:12: note: in expansion of macro ‘R_DT_qIv’
87 | return R_DT_qIv(p) ;
| ^~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2383:5: note: ‘std::expm1’
2383 | expm1(_Tp __x)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:50:19: note: ‘Rcpp::expm1’
50 | VECTORIZED_MATH_1(expm1 , ::expm1 )
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:94:9: note: in definition of macro ‘VECTORIZED_MATH_1’
94 | __NAME__( const VectorBase<INTSXP,NA,T>& t ){ \
| ^~~~~~~~
In file included from /home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/stats.h:32:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/norm.h: In function ‘double Rcpp::stats::dnorm_1(double, double, int)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/norm.h:39:30: error: ‘::exp’ has not been declared
39 | M_1_SQRT_2PI * ::exp(-0.5 * x * x));
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/norm.h:39:30: note: suggested alternatives:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1059:5: note: ‘std::exp’
1059 | exp(const complex<_Tp>& __z) { return __complex_exp(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:244:21: note: ‘Rcpp::exp’
244 | RCPP_SUGAR_COMPLEX( exp, Rcomplex )
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:234:5: note: in definition of macro ‘RCPP_SUGAR_COMPLEX’
234 | __NAME__(const VectorBase<CPLXSXP,NA,T>& t) { \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/norm.h: In function ‘double Rcpp::stats::dnorm_0(double, int)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/norm.h:52:30: error: ‘::exp’ has not been declared
52 | M_1_SQRT_2PI * ::exp(-0.5 * x * x));
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/norm.h:52:30: note: suggested alternatives:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1059:5: note: ‘std::exp’
1059 | exp(const complex<_Tp>& __z) { return __complex_exp(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:244:21: note: ‘Rcpp::exp’
244 | RCPP_SUGAR_COMPLEX( exp, Rcomplex )
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:234:5: note: in definition of macro ‘RCPP_SUGAR_COMPLEX’
234 | __NAME__(const VectorBase<CPLXSXP,NA,T>& t) { \
| ^~~~~~~~
In file included from /home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/stats.h:33:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/gamma.h: In function ‘double Rcpp::stats::dgamma_1(double, double, int)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/gamma.h:50:32: error: ‘::log’ has not been declared
50 | return log_p ? pr + ::log(shape/x) : pr*shape/x;
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/gamma.h:50:32: note: suggested alternatives:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1086:5: note: ‘std::log’
1086 | log(const complex<_Tp>& __z) { return __complex_log(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:245:21: note: ‘Rcpp::log’
245 | RCPP_SUGAR_COMPLEX( log, Rcomplex )
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:234:5: note: in definition of macro ‘RCPP_SUGAR_COMPLEX’
234 | __NAME__(const VectorBase<CPLXSXP,NA,T>& t) { \
| ^~~~~~~~
In file included from /home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/stats.h:37:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/lnorm.h: In function ‘double Rcpp::stats::dlnorm_0(double, int)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/lnorm.h:40:11: error: ‘::log’ has not been declared
40 | y = ::log(x);
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/lnorm.h:40:11: note: suggested alternatives:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1086:5: note: ‘std::log’
1086 | log(const complex<_Tp>& __z) { return __complex_log(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:245:21: note: ‘Rcpp::log’
245 | RCPP_SUGAR_COMPLEX( log, Rcomplex )
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:234:5: note: in definition of macro ‘RCPP_SUGAR_COMPLEX’
234 | __NAME__(const VectorBase<CPLXSXP,NA,T>& t) { \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/lnorm.h:42:47: error: ‘::log’ has not been declared
42 | -(M_LN_SQRT_2PI + 0.5 * y * y + ::log(x)) :
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/lnorm.h:42:47: note: suggested alternatives:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1086:5: note: ‘std::log’
1086 | log(const complex<_Tp>& __z) { return __complex_log(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:245:21: note: ‘Rcpp::log’
245 | RCPP_SUGAR_COMPLEX( log, Rcomplex )
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:234:5: note: in definition of macro ‘RCPP_SUGAR_COMPLEX’
234 | __NAME__(const VectorBase<CPLXSXP,NA,T>& t) { \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/lnorm.h:43:30: error: ‘::exp’ has not been declared
43 | M_1_SQRT_2PI * ::exp(-0.5 * y * y) / x);
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/lnorm.h:43:30: note: suggested alternatives:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1059:5: note: ‘std::exp’
1059 | exp(const complex<_Tp>& __z) { return __complex_exp(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:244:21: note: ‘Rcpp::exp’
244 | RCPP_SUGAR_COMPLEX( exp, Rcomplex )
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:234:5: note: in definition of macro ‘RCPP_SUGAR_COMPLEX’
234 | __NAME__(const VectorBase<CPLXSXP,NA,T>& t) { \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/lnorm.h: In function ‘double Rcpp::stats::dlnorm_1(double, double, int)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/lnorm.h:57:12: error: ‘::log’ has not been declared
57 | y = (::log(x) - meanlog);
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/lnorm.h:57:12: note: suggested alternatives:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1086:5: note: ‘std::log’
1086 | log(const complex<_Tp>& __z) { return __complex_log(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:245:21: note: ‘Rcpp::log’
245 | RCPP_SUGAR_COMPLEX( log, Rcomplex )
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:234:5: note: in definition of macro ‘RCPP_SUGAR_COMPLEX’
234 | __NAME__(const VectorBase<CPLXSXP,NA,T>& t) { \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/lnorm.h:59:47: error: ‘::log’ has not been declared
59 | -(M_LN_SQRT_2PI + 0.5 * y * y + ::log(x)) :
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/lnorm.h:59:47: note: suggested alternatives:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1086:5: note: ‘std::log’
1086 | log(const complex<_Tp>& __z) { return __complex_log(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:245:21: note: ‘Rcpp::log’
245 | RCPP_SUGAR_COMPLEX( log, Rcomplex )
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:234:5: note: in definition of macro ‘RCPP_SUGAR_COMPLEX’
234 | __NAME__(const VectorBase<CPLXSXP,NA,T>& t) { \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/lnorm.h:60:30: error: ‘::exp’ has not been declared
60 | M_1_SQRT_2PI * ::exp(-0.5 * y * y) / x);
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/lnorm.h:60:30: note: suggested alternatives:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1059:5: note: ‘std::exp’
1059 | exp(const complex<_Tp>& __z) { return __complex_exp(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:244:21: note: ‘Rcpp::exp’
244 | RCPP_SUGAR_COMPLEX( exp, Rcomplex )
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:234:5: note: in definition of macro ‘RCPP_SUGAR_COMPLEX’
234 | __NAME__(const VectorBase<CPLXSXP,NA,T>& t) { \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/lnorm.h: In function ‘double Rcpp::stats::plnorm_0(double, int, int)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/lnorm.h:72:39: error: ‘::log’ has not been declared
72 | return Rcpp::stats::pnorm_0(::log(x), lower_tail, log_p);
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/lnorm.h:72:39: note: suggested alternatives:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1086:5: note: ‘std::log’
1086 | log(const complex<_Tp>& __z) { return __complex_log(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:245:21: note: ‘Rcpp::log’
245 | RCPP_SUGAR_COMPLEX( log, Rcomplex )
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:234:5: note: in definition of macro ‘RCPP_SUGAR_COMPLEX’
234 | __NAME__(const VectorBase<CPLXSXP,NA,T>& t) { \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/lnorm.h: In function ‘double Rcpp::stats::plnorm_1(double, double, int, int)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/lnorm.h:83:39: error: ‘::log’ has not been declared
83 | return Rcpp::stats::pnorm_1(::log(x), meanlog, lower_tail, log_p);
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/lnorm.h:83:39: note: suggested alternatives:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1086:5: note: ‘std::log’
1086 | log(const complex<_Tp>& __z) { return __complex_log(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:245:21: note: ‘Rcpp::log’
245 | RCPP_SUGAR_COMPLEX( log, Rcomplex )
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:234:5: note: in definition of macro ‘RCPP_SUGAR_COMPLEX’
234 | __NAME__(const VectorBase<CPLXSXP,NA,T>& t) { \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/lnorm.h: In function ‘double Rcpp::stats::qlnorm_0(double, int, int)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/lnorm.h:94:14: error: ‘::exp’ has not been declared
94 | return ::exp(::Rf_qnorm5(p, 0.0, 1.0, lower_tail, log_p));
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/lnorm.h:94:14: note: suggested alternatives:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1059:5: note: ‘std::exp’
1059 | exp(const complex<_Tp>& __z) { return __complex_exp(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:244:21: note: ‘Rcpp::exp’
244 | RCPP_SUGAR_COMPLEX( exp, Rcomplex )
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:234:5: note: in definition of macro ‘RCPP_SUGAR_COMPLEX’
234 | __NAME__(const VectorBase<CPLXSXP,NA,T>& t) { \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/lnorm.h: In function ‘double Rcpp::stats::qlnorm_1(double, double, int, int)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/lnorm.h:104:14: error: ‘::exp’ has not been declared
104 | return ::exp(::Rf_qnorm5(p, meanlog, 1.0, lower_tail, log_p));
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/lnorm.h:104:14: note: suggested alternatives:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1059:5: note: ‘std::exp’
1059 | exp(const complex<_Tp>& __z) { return __complex_exp(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:244:21: note: ‘Rcpp::exp’
244 | RCPP_SUGAR_COMPLEX( exp, Rcomplex )
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:234:5: note: in definition of macro ‘RCPP_SUGAR_COMPLEX’
234 | __NAME__(const VectorBase<CPLXSXP,NA,T>& t) { \
| ^~~~~~~~
In file included from /home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/stats.h:38:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/weibull.h: In function ‘double Rcpp::stats::dweibull_1(double, double, int)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/weibull.h:42:14: error: ‘::pow’ has not been declared
42 | tmp1 = ::pow(x, shape - 1);
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/weibull.h:42:14: note: suggested alternatives:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:2482:5: note: ‘std::pow’
2482 | pow(const std::complex<_Tp>& __x, const std::complex<_Up>& __y)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/pow.h:79:45: note: ‘Rcpp::pow’
79 | inline sugar::Pow<RTYPE,NA,T,EXPONENT_TYPE> pow(
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/weibull.h:46:19: error: ‘::log’ has not been declared
46 | -tmp2 + ::log(shape * tmp1) :
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/weibull.h:46:19: note: suggested alternatives:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1086:5: note: ‘std::log’
1086 | log(const complex<_Tp>& __z) { return __complex_log(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:245:21: note: ‘Rcpp::log’
245 | RCPP_SUGAR_COMPLEX( log, Rcomplex )
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:234:5: note: in definition of macro ‘RCPP_SUGAR_COMPLEX’
234 | __NAME__(const VectorBase<CPLXSXP,NA,T>& t) { \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/weibull.h:47:26: error: ‘::exp’ has not been declared
47 | shape * tmp1 * ::exp(-tmp2);
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/weibull.h:47:26: note: suggested alternatives:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1059:5: note: ‘std::exp’
1059 | exp(const complex<_Tp>& __z) { return __complex_exp(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:244:21: note: ‘Rcpp::exp’
244 | RCPP_SUGAR_COMPLEX( exp, Rcomplex )
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:234:5: note: in definition of macro ‘RCPP_SUGAR_COMPLEX’
234 | __NAME__(const VectorBase<CPLXSXP,NA,T>& t) { \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/weibull.h: In function ‘double Rcpp::stats::pweibull_1(double, double, int, int)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/weibull.h:58:12: error: ‘::pow’ has not been declared
58 | x = -::pow(x , shape);
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/weibull.h:58:12: note: suggested alternatives:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:2482:5: note: ‘std::pow’
2482 | pow(const std::complex<_Tp>& __x, const std::complex<_Up>& __y)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/pow.h:79:45: note: ‘Rcpp::pow’
79 | inline sugar::Pow<RTYPE,NA,T,EXPONENT_TYPE> pow(
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/weibull.h:62:35: error: ‘::log’ has not been declared
62 | ? (x > -M_LN2 ? ::log(-::expm1(x)) : ::log1p(-::exp(x)))
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/weibull.h:62:35: note: suggested alternatives:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1086:5: note: ‘std::log’
1086 | log(const complex<_Tp>& __z) { return __complex_log(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:245:21: note: ‘Rcpp::log’
245 | RCPP_SUGAR_COMPLEX( log, Rcomplex )
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:234:5: note: in definition of macro ‘RCPP_SUGAR_COMPLEX’
234 | __NAME__(const VectorBase<CPLXSXP,NA,T>& t) { \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/weibull.h:62:42: error: ‘::expm1’ has not been declared
62 | ? (x > -M_LN2 ? ::log(-::expm1(x)) : ::log1p(-::exp(x)))
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/weibull.h:62:42: note: suggested alternatives:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2383:5: note: ‘std::expm1’
2383 | expm1(_Tp __x)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:50:19: note: ‘Rcpp::expm1’
50 | VECTORIZED_MATH_1(expm1 , ::expm1 )
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:94:9: note: in definition of macro ‘VECTORIZED_MATH_1’
94 | __NAME__( const VectorBase<INTSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/weibull.h:62:56: error: ‘::log1p’ has not been declared
62 | ? (x > -M_LN2 ? ::log(-::expm1(x)) : ::log1p(-::exp(x)))
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/weibull.h:62:56: note: suggested alternatives:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2524:5: note: ‘std::log1p’
2524 | log1p(_Tp __x)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:51:19: note: ‘Rcpp::log1p’
51 | VECTORIZED_MATH_1(log1p , ::log1p )
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:94:9: note: in definition of macro ‘VECTORIZED_MATH_1’
94 | __NAME__( const VectorBase<INTSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/weibull.h:62:65: error: ‘::exp’ has not been declared
62 | ? (x > -M_LN2 ? ::log(-::expm1(x)) : ::log1p(-::exp(x)))
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/weibull.h:62:65: note: suggested alternatives:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1059:5: note: ‘std::exp’
1059 | exp(const complex<_Tp>& __z) { return __complex_exp(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:244:21: note: ‘Rcpp::exp’
244 | RCPP_SUGAR_COMPLEX( exp, Rcomplex )
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:234:5: note: in definition of macro ‘RCPP_SUGAR_COMPLEX’
234 | __NAME__(const VectorBase<CPLXSXP,NA,T>& t) { \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/weibull.h:63:22: error: ‘::expm1’ has not been declared
63 | : -::expm1(x));
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/weibull.h:63:22: note: suggested alternatives:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2383:5: note: ‘std::expm1’
2383 | expm1(_Tp __x)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:50:19: note: ‘Rcpp::expm1’
50 | VECTORIZED_MATH_1(expm1 , ::expm1 )
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:94:9: note: in definition of macro ‘VECTORIZED_MATH_1’
94 | __NAME__( const VectorBase<INTSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/dpq/macros.h:38:46: error: ‘::exp’ has not been declared
38 | #define R_D_exp(x) (log_p ? (x) : ::exp(x)) /* exp(x) */
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/weibull.h:65:12: note: in expansion of macro ‘R_D_exp’
65 | return R_D_exp(x);
| ^~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/dpq/macros.h:38:46: note: suggested alternatives:
38 | #define R_D_exp(x) (log_p ? (x) : ::exp(x)) /* exp(x) */
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/weibull.h:65:12: note: in expansion of macro ‘R_D_exp’
65 | return R_D_exp(x);
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1059:5: note: ‘std::exp’
1059 | exp(const complex<_Tp>& __z) { return __complex_exp(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:244:21: note: ‘Rcpp::exp’
244 | RCPP_SUGAR_COMPLEX( exp, Rcomplex )
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:234:5: note: in definition of macro ‘RCPP_SUGAR_COMPLEX’
234 | __NAME__(const VectorBase<CPLXSXP,NA,T>& t) { \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/weibull.h: In function ‘double Rcpp::stats::qweibull_1(double, double, int, int)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/weibull.h:76:14: error: ‘::pow’ has not been declared
76 | return ::pow(- R_DT_Clog(p), 1./shape);
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/weibull.h:76:14: note: suggested alternatives:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:2482:5: note: ‘std::pow’
2482 | pow(const std::complex<_Tp>& __x, const std::complex<_Up>& __y)
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/pow.h:79:45: note: ‘Rcpp::pow’
79 | inline sugar::Pow<RTYPE,NA,T,EXPONENT_TYPE> pow(
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/dpq/macros.h:43:43: error: ‘::log’ has not been declared
43 | #define R_Log1_Exp(x) ((x) > -M_LN2 ? ::log(-::expm1(x)) : ::log1p(-::exp(x)))
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/dpq/macros.h:46:34: note: in expansion of macro ‘R_Log1_Exp’
46 | #define R_D_LExp(x) (log_p ? R_Log1_Exp(x) : ::log1p(-x))
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/dpq/macros.h:63:38: note: in expansion of macro ‘R_D_LExp’
63 | #define R_DT_Clog(p) (lower_tail? R_D_LExp(p): R_D_log(p))/* log(1-p) in qF*/
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/weibull.h:76:20: note: in expansion of macro ‘R_DT_Clog’
76 | return ::pow(- R_DT_Clog(p), 1./shape);
| ^~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/dpq/macros.h:43:43: note: suggested alternatives:
43 | #define R_Log1_Exp(x) ((x) > -M_LN2 ? ::log(-::expm1(x)) : ::log1p(-::exp(x)))
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/dpq/macros.h:46:34: note: in expansion of macro ‘R_Log1_Exp’
46 | #define R_D_LExp(x) (log_p ? R_Log1_Exp(x) : ::log1p(-x))
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/dpq/macros.h:63:38: note: in expansion of macro ‘R_D_LExp’
63 | #define R_DT_Clog(p) (lower_tail? R_D_LExp(p): R_D_log(p))/* log(1-p) in qF*/
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/weibull.h:76:20: note: in expansion of macro ‘R_DT_Clog’
76 | return ::pow(- R_DT_Clog(p), 1./shape);
| ^~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1086:5: note: ‘std::log’
1086 | log(const complex<_Tp>& __z) { return __complex_log(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:245:21: note: ‘Rcpp::log’
245 | RCPP_SUGAR_COMPLEX( log, Rcomplex )
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:234:5: note: in definition of macro ‘RCPP_SUGAR_COMPLEX’
234 | __NAME__(const VectorBase<CPLXSXP,NA,T>& t) { \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/dpq/macros.h:43:50: error: ‘::expm1’ has not been declared
43 | #define R_Log1_Exp(x) ((x) > -M_LN2 ? ::log(-::expm1(x)) : ::log1p(-::exp(x)))
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/dpq/macros.h:46:34: note: in expansion of macro ‘R_Log1_Exp’
46 | #define R_D_LExp(x) (log_p ? R_Log1_Exp(x) : ::log1p(-x))
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/dpq/macros.h:63:38: note: in expansion of macro ‘R_D_LExp’
63 | #define R_DT_Clog(p) (lower_tail? R_D_LExp(p): R_D_log(p))/* log(1-p) in qF*/
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/weibull.h:76:20: note: in expansion of macro ‘R_DT_Clog’
76 | return ::pow(- R_DT_Clog(p), 1./shape);
| ^~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/dpq/macros.h:43:50: note: suggested alternatives:
43 | #define R_Log1_Exp(x) ((x) > -M_LN2 ? ::log(-::expm1(x)) : ::log1p(-::exp(x)))
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/dpq/macros.h:46:34: note: in expansion of macro ‘R_Log1_Exp’
46 | #define R_D_LExp(x) (log_p ? R_Log1_Exp(x) : ::log1p(-x))
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/dpq/macros.h:63:38: note: in expansion of macro ‘R_D_LExp’
63 | #define R_DT_Clog(p) (lower_tail? R_D_LExp(p): R_D_log(p))/* log(1-p) in qF*/
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/weibull.h:76:20: note: in expansion of macro ‘R_DT_Clog’
76 | return ::pow(- R_DT_Clog(p), 1./shape);
| ^~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2383:5: note: ‘std::expm1’
2383 | expm1(_Tp __x)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:50:19: note: ‘Rcpp::expm1’
50 | VECTORIZED_MATH_1(expm1 , ::expm1 )
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:94:9: note: in definition of macro ‘VECTORIZED_MATH_1’
94 | __NAME__( const VectorBase<INTSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/dpq/macros.h:43:64: error: ‘::log1p’ has not been declared
43 | #define R_Log1_Exp(x) ((x) > -M_LN2 ? ::log(-::expm1(x)) : ::log1p(-::exp(x)))
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/dpq/macros.h:46:34: note: in expansion of macro ‘R_Log1_Exp’
46 | #define R_D_LExp(x) (log_p ? R_Log1_Exp(x) : ::log1p(-x))
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/dpq/macros.h:63:38: note: in expansion of macro ‘R_D_LExp’
63 | #define R_DT_Clog(p) (lower_tail? R_D_LExp(p): R_D_log(p))/* log(1-p) in qF*/
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/weibull.h:76:20: note: in expansion of macro ‘R_DT_Clog’
76 | return ::pow(- R_DT_Clog(p), 1./shape);
| ^~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/dpq/macros.h:43:64: note: suggested alternatives:
43 | #define R_Log1_Exp(x) ((x) > -M_LN2 ? ::log(-::expm1(x)) : ::log1p(-::exp(x)))
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/dpq/macros.h:46:34: note: in expansion of macro ‘R_Log1_Exp’
46 | #define R_D_LExp(x) (log_p ? R_Log1_Exp(x) : ::log1p(-x))
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/dpq/macros.h:63:38: note: in expansion of macro ‘R_D_LExp’
63 | #define R_DT_Clog(p) (lower_tail? R_D_LExp(p): R_D_log(p))/* log(1-p) in qF*/
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/weibull.h:76:20: note: in expansion of macro ‘R_DT_Clog’
76 | return ::pow(- R_DT_Clog(p), 1./shape);
| ^~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2524:5: note: ‘std::log1p’
2524 | log1p(_Tp __x)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:51:19: note: ‘Rcpp::log1p’
51 | VECTORIZED_MATH_1(log1p , ::log1p )
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:94:9: note: in definition of macro ‘VECTORIZED_MATH_1’
94 | __NAME__( const VectorBase<INTSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/dpq/macros.h:43:73: error: ‘::exp’ has not been declared
43 | #define R_Log1_Exp(x) ((x) > -M_LN2 ? ::log(-::expm1(x)) : ::log1p(-::exp(x)))
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/dpq/macros.h:46:34: note: in expansion of macro ‘R_Log1_Exp’
46 | #define R_D_LExp(x) (log_p ? R_Log1_Exp(x) : ::log1p(-x))
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/dpq/macros.h:63:38: note: in expansion of macro ‘R_D_LExp’
63 | #define R_DT_Clog(p) (lower_tail? R_D_LExp(p): R_D_log(p))/* log(1-p) in qF*/
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/weibull.h:76:20: note: in expansion of macro ‘R_DT_Clog’
76 | return ::pow(- R_DT_Clog(p), 1./shape);
| ^~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/dpq/macros.h:43:73: note: suggested alternatives:
43 | #define R_Log1_Exp(x) ((x) > -M_LN2 ? ::log(-::expm1(x)) : ::log1p(-::exp(x)))
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/dpq/macros.h:46:34: note: in expansion of macro ‘R_Log1_Exp’
46 | #define R_D_LExp(x) (log_p ? R_Log1_Exp(x) : ::log1p(-x))
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/dpq/macros.h:63:38: note: in expansion of macro ‘R_D_LExp’
63 | #define R_DT_Clog(p) (lower_tail? R_D_LExp(p): R_D_log(p))/* log(1-p) in qF*/
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/weibull.h:76:20: note: in expansion of macro ‘R_DT_Clog’
76 | return ::pow(- R_DT_Clog(p), 1./shape);
| ^~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1059:5: note: ‘std::exp’
1059 | exp(const complex<_Tp>& __z) { return __complex_exp(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:244:21: note: ‘Rcpp::exp’
244 | RCPP_SUGAR_COMPLEX( exp, Rcomplex )
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:234:5: note: in definition of macro ‘RCPP_SUGAR_COMPLEX’
234 | __NAME__(const VectorBase<CPLXSXP,NA,T>& t) { \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/dpq/macros.h:46:52: error: ‘::log1p’ has not been declared
46 | #define R_D_LExp(x) (log_p ? R_Log1_Exp(x) : ::log1p(-x))
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/dpq/macros.h:63:38: note: in expansion of macro ‘R_D_LExp’
63 | #define R_DT_Clog(p) (lower_tail? R_D_LExp(p): R_D_log(p))/* log(1-p) in qF*/
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/weibull.h:76:20: note: in expansion of macro ‘R_DT_Clog’
76 | return ::pow(- R_DT_Clog(p), 1./shape);
| ^~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/dpq/macros.h:46:52: note: suggested alternatives:
46 | #define R_D_LExp(x) (log_p ? R_Log1_Exp(x) : ::log1p(-x))
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/dpq/macros.h:63:38: note: in expansion of macro ‘R_D_LExp’
63 | #define R_DT_Clog(p) (lower_tail? R_D_LExp(p): R_D_log(p))/* log(1-p) in qF*/
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/weibull.h:76:20: note: in expansion of macro ‘R_DT_Clog’
76 | return ::pow(- R_DT_Clog(p), 1./shape);
| ^~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2524:5: note: ‘std::log1p’
2524 | log1p(_Tp __x)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:51:19: note: ‘Rcpp::log1p’
51 | VECTORIZED_MATH_1(log1p , ::log1p )
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:94:9: note: in definition of macro ‘VECTORIZED_MATH_1’
94 | __NAME__( const VectorBase<INTSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/dpq/macros.h:39:46: error: ‘::log’ has not been declared
39 | #define R_D_log(p) (log_p ? (p) : ::log(p)) /* log(p) */
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/dpq/macros.h:63:51: note: in expansion of macro ‘R_D_log’
63 | #define R_DT_Clog(p) (lower_tail? R_D_LExp(p): R_D_log(p))/* log(1-p) in qF*/
| ^~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/weibull.h:76:20: note: in expansion of macro ‘R_DT_Clog’
76 | return ::pow(- R_DT_Clog(p), 1./shape);
| ^~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/dpq/macros.h:39:46: note: suggested alternatives:
39 | #define R_D_log(p) (log_p ? (p) : ::log(p)) /* log(p) */
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/dpq/macros.h:63:51: note: in expansion of macro ‘R_D_log’
63 | #define R_DT_Clog(p) (lower_tail? R_D_LExp(p): R_D_log(p))/* log(1-p) in qF*/
| ^~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/weibull.h:76:20: note: in expansion of macro ‘R_DT_Clog’
76 | return ::pow(- R_DT_Clog(p), 1./shape);
| ^~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1086:5: note: ‘std::log’
1086 | log(const complex<_Tp>& __z) { return __complex_log(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:245:21: note: ‘Rcpp::log’
245 | RCPP_SUGAR_COMPLEX( log, Rcomplex )
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:234:5: note: in definition of macro ‘RCPP_SUGAR_COMPLEX’
234 | __NAME__(const VectorBase<CPLXSXP,NA,T>& t) { \
| ^~~~~~~~
In file included from /home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/stats.h:39:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/logis.h: In function ‘double Rcpp::stats::dlogis_0(double, int)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/logis.h:35:11: error: ‘::exp’ has not been declared
35 | e = ::exp(-::fabs(x));
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/logis.h:35:11: note: suggested alternatives:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1059:5: note: ‘std::exp’
1059 | exp(const complex<_Tp>& __z) { return __complex_exp(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:244:21: note: ‘Rcpp::exp’
244 | RCPP_SUGAR_COMPLEX( exp, Rcomplex )
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:234:5: note: in definition of macro ‘RCPP_SUGAR_COMPLEX’
234 | __NAME__(const VectorBase<CPLXSXP,NA,T>& t) { \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/logis.h:35:18: error: ‘::fabs’ has not been declared; did you mean ‘std::fabs’?
35 | e = ::exp(-::fabs(x));
| ^~~~
| std::fabs
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:2429:5: note: ‘std::fabs’ declared here
2429 | fabs(const std::complex<_Tp>& __z)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/logis.h:37:31: error: ‘::log’ has not been declared
37 | return give_log ? -(x + ::log(f * f)) : e / (f * f);
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/logis.h:37:31: note: suggested alternatives:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1086:5: note: ‘std::log’
1086 | log(const complex<_Tp>& __z) { return __complex_log(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:245:21: note: ‘Rcpp::log’
245 | RCPP_SUGAR_COMPLEX( log, Rcomplex )
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:234:5: note: in definition of macro ‘RCPP_SUGAR_COMPLEX’
234 | __NAME__(const VectorBase<CPLXSXP,NA,T>& t) { \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/logis.h: In function ‘double Rcpp::stats::dlogis_1(double, double, int)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/logis.h:47:11: error: ‘::fabs’ has not been declared; did you mean ‘std::fabs’?
47 | x = ::fabs((x - location));
| ^~~~
| std::fabs
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:2429:5: note: ‘std::fabs’ declared here
2429 | fabs(const std::complex<_Tp>& __z)
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/logis.h:48:11: error: ‘::exp’ has not been declared
48 | e = ::exp(-x);
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/logis.h:48:11: note: suggested alternatives:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1059:5: note: ‘std::exp’
1059 | exp(const complex<_Tp>& __z) { return __complex_exp(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:244:21: note: ‘Rcpp::exp’
244 | RCPP_SUGAR_COMPLEX( exp, Rcomplex )
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:234:5: note: in definition of macro ‘RCPP_SUGAR_COMPLEX’
234 | __NAME__(const VectorBase<CPLXSXP,NA,T>& t) { \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/logis.h:50:31: error: ‘::log’ has not been declared
50 | return give_log ? -(x + ::log(f * f)) : e / (f * f);
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/logis.h:50:31: note: suggested alternatives:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1086:5: note: ‘std::log’
1086 | log(const complex<_Tp>& __z) { return __complex_log(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:245:21: note: ‘Rcpp::log’
245 | RCPP_SUGAR_COMPLEX( log, Rcomplex )
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:234:5: note: in definition of macro ‘RCPP_SUGAR_COMPLEX’
234 | __NAME__(const VectorBase<CPLXSXP,NA,T>& t) { \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/logis.h: In function ‘double Rcpp::stats::plogis_0(double, int, int)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/logis.h:64:11: error: ‘::exp’ has not been declared
64 | x = ::exp(lower_tail ? -x : x);
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/logis.h:64:11: note: suggested alternatives:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1059:5: note: ‘std::exp’
1059 | exp(const complex<_Tp>& __z) { return __complex_exp(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:244:21: note: ‘Rcpp::exp’
244 | RCPP_SUGAR_COMPLEX( exp, Rcomplex )
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:234:5: note: in definition of macro ‘RCPP_SUGAR_COMPLEX’
234 | __NAME__(const VectorBase<CPLXSXP,NA,T>& t) { \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/logis.h:65:24: error: ‘::log1p’ has not been declared
65 | return (log_p ? -::log1p(x) : 1 / (1 + x));
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/logis.h:65:24: note: suggested alternatives:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2524:5: note: ‘std::log1p’
2524 | log1p(_Tp __x)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:51:19: note: ‘Rcpp::log1p’
51 | VECTORIZED_MATH_1(log1p , ::log1p )
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:94:9: note: in definition of macro ‘VECTORIZED_MATH_1’
94 | __NAME__( const VectorBase<INTSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/logis.h: In function ‘double Rcpp::stats::plogis_1(double, double, int, int)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/logis.h:80:11: error: ‘::exp’ has not been declared
80 | x = ::exp(lower_tail ? -x : x);
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/logis.h:80:11: note: suggested alternatives:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1059:5: note: ‘std::exp’
1059 | exp(const complex<_Tp>& __z) { return __complex_exp(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:244:21: note: ‘Rcpp::exp’
244 | RCPP_SUGAR_COMPLEX( exp, Rcomplex )
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:234:5: note: in definition of macro ‘RCPP_SUGAR_COMPLEX’
234 | __NAME__(const VectorBase<CPLXSXP,NA,T>& t) { \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/logis.h:81:24: error: ‘::log1p’ has not been declared
81 | return (log_p ? -::log1p(x) : 1 / (1 + x));
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/logis.h:81:24: note: suggested alternatives:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2524:5: note: ‘std::log1p’
2524 | log1p(_Tp __x)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:51:19: note: ‘Rcpp::log1p’
51 | VECTORIZED_MATH_1(log1p , ::log1p )
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:94:9: note: in definition of macro ‘VECTORIZED_MATH_1’
94 | __NAME__( const VectorBase<INTSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/logis.h: In function ‘double Rcpp::stats::qlogis_0(double, int, int)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/logis.h:95:23: error: ‘::log1p’ has not been declared
95 | p = p - ::log1p(- ::exp(p));
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/logis.h:95:23: note: suggested alternatives:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2524:5: note: ‘std::log1p’
2524 | log1p(_Tp __x)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:51:19: note: ‘Rcpp::log1p’
51 | VECTORIZED_MATH_1(log1p , ::log1p )
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:94:9: note: in definition of macro ‘VECTORIZED_MATH_1’
94 | __NAME__( const VectorBase<INTSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/logis.h:95:33: error: ‘::exp’ has not been declared
95 | p = p - ::log1p(- ::exp(p));
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/logis.h:95:33: note: suggested alternatives:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1059:5: note: ‘std::exp’
1059 | exp(const complex<_Tp>& __z) { return __complex_exp(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:244:21: note: ‘Rcpp::exp’
244 | RCPP_SUGAR_COMPLEX( exp, Rcomplex )
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:234:5: note: in definition of macro ‘RCPP_SUGAR_COMPLEX’
234 | __NAME__(const VectorBase<CPLXSXP,NA,T>& t) { \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/logis.h:97:19: error: ‘::log1p’ has not been declared
97 | p = ::log1p(- ::exp(p)) - p;
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/logis.h:97:19: note: suggested alternatives:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2524:5: note: ‘std::log1p’
2524 | log1p(_Tp __x)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:51:19: note: ‘Rcpp::log1p’
51 | VECTORIZED_MATH_1(log1p , ::log1p )
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:94:9: note: in definition of macro ‘VECTORIZED_MATH_1’
94 | __NAME__( const VectorBase<INTSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/logis.h:97:29: error: ‘::exp’ has not been declared
97 | p = ::log1p(- ::exp(p)) - p;
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/logis.h:97:29: note: suggested alternatives:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1059:5: note: ‘std::exp’
1059 | exp(const complex<_Tp>& __z) { return __complex_exp(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:244:21: note: ‘Rcpp::exp’
244 | RCPP_SUGAR_COMPLEX( exp, Rcomplex )
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:234:5: note: in definition of macro ‘RCPP_SUGAR_COMPLEX’
234 | __NAME__(const VectorBase<CPLXSXP,NA,T>& t) { \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/logis.h:100:15: error: ‘::log’ has not been declared
100 | p = ::log(lower_tail ? (p / (1. - p)) : ((1. - p) / p));
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/logis.h:100:15: note: suggested alternatives:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1086:5: note: ‘std::log’
1086 | log(const complex<_Tp>& __z) { return __complex_log(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:245:21: note: ‘Rcpp::log’
245 | RCPP_SUGAR_COMPLEX( log, Rcomplex )
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:234:5: note: in definition of macro ‘RCPP_SUGAR_COMPLEX’
234 | __NAME__(const VectorBase<CPLXSXP,NA,T>& t) { \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/logis.h: In function ‘double Rcpp::stats::qlogis_1(double, double, int, int)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/logis.h:117:23: error: ‘::log1p’ has not been declared
117 | p = p - ::log1p(- ::exp(p));
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/logis.h:117:23: note: suggested alternatives:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2524:5: note: ‘std::log1p’
2524 | log1p(_Tp __x)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:51:19: note: ‘Rcpp::log1p’
51 | VECTORIZED_MATH_1(log1p , ::log1p )
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:94:9: note: in definition of macro ‘VECTORIZED_MATH_1’
94 | __NAME__( const VectorBase<INTSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/logis.h:117:33: error: ‘::exp’ has not been declared
117 | p = p - ::log1p(- ::exp(p));
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/logis.h:117:33: note: suggested alternatives:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1059:5: note: ‘std::exp’
1059 | exp(const complex<_Tp>& __z) { return __complex_exp(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:244:21: note: ‘Rcpp::exp’
244 | RCPP_SUGAR_COMPLEX( exp, Rcomplex )
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:234:5: note: in definition of macro ‘RCPP_SUGAR_COMPLEX’
234 | __NAME__(const VectorBase<CPLXSXP,NA,T>& t) { \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/logis.h:119:19: error: ‘::log1p’ has not been declared
119 | p = ::log1p(- ::exp(p)) - p;
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/logis.h:119:19: note: suggested alternatives:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2524:5: note: ‘std::log1p’
2524 | log1p(_Tp __x)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:51:19: note: ‘Rcpp::log1p’
51 | VECTORIZED_MATH_1(log1p , ::log1p )
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:94:9: note: in definition of macro ‘VECTORIZED_MATH_1’
94 | __NAME__( const VectorBase<INTSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/logis.h:119:29: error: ‘::exp’ has not been declared
119 | p = ::log1p(- ::exp(p)) - p;
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/logis.h:119:29: note: suggested alternatives:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1059:5: note: ‘std::exp’
1059 | exp(const complex<_Tp>& __z) { return __complex_exp(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:244:21: note: ‘Rcpp::exp’
244 | RCPP_SUGAR_COMPLEX( exp, Rcomplex )
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:234:5: note: in definition of macro ‘RCPP_SUGAR_COMPLEX’
234 | __NAME__(const VectorBase<CPLXSXP,NA,T>& t) { \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/logis.h:122:15: error: ‘::log’ has not been declared
122 | p = ::log(lower_tail ? (p / (1. - p)) : ((1. - p) / p));
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/logis.h:122:15: note: suggested alternatives:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1086:5: note: ‘std::log’
1086 | log(const complex<_Tp>& __z) { return __complex_log(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:245:21: note: ‘Rcpp::log’
245 | RCPP_SUGAR_COMPLEX( log, Rcomplex )
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:234:5: note: in definition of macro ‘RCPP_SUGAR_COMPLEX’
234 | __NAME__(const VectorBase<CPLXSXP,NA,T>& t) { \
| ^~~~~~~~
In file included from /home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/stats.h:41:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/exp.h: In function ‘double Rcpp::stats::d_exp_0(double, int)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/exp.h:39:32: error: ‘::exp’ has not been declared
39 | return give_log ? (-x) : ::exp(-x);
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/exp.h:39:32: note: suggested alternatives:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1059:5: note: ‘std::exp’
1059 | exp(const complex<_Tp>& __z) { return __complex_exp(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:244:21: note: ‘Rcpp::exp’
244 | RCPP_SUGAR_COMPLEX( exp, Rcomplex )
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:234:5: note: in definition of macro ‘RCPP_SUGAR_COMPLEX’
234 | __NAME__(const VectorBase<CPLXSXP,NA,T>& t) { \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/exp.h: In function ‘double Rcpp::stats::q_exp_0(double, int, int)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/dpq/macros.h:43:43: error: ‘::log’ has not been declared
43 | #define R_Log1_Exp(x) ((x) > -M_LN2 ? ::log(-::expm1(x)) : ::log1p(-::exp(x)))
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/dpq/macros.h:46:34: note: in expansion of macro ‘R_Log1_Exp’
46 | #define R_D_LExp(x) (log_p ? R_Log1_Exp(x) : ::log1p(-x))
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/dpq/macros.h:63:38: note: in expansion of macro ‘R_D_LExp’
63 | #define R_DT_Clog(p) (lower_tail? R_D_LExp(p): R_D_log(p))/* log(1-p) in qF*/
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/exp.h:51:14: note: in expansion of macro ‘R_DT_Clog’
51 | return - R_DT_Clog(p);
| ^~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/dpq/macros.h:43:43: note: suggested alternatives:
43 | #define R_Log1_Exp(x) ((x) > -M_LN2 ? ::log(-::expm1(x)) : ::log1p(-::exp(x)))
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/dpq/macros.h:46:34: note: in expansion of macro ‘R_Log1_Exp’
46 | #define R_D_LExp(x) (log_p ? R_Log1_Exp(x) : ::log1p(-x))
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/dpq/macros.h:63:38: note: in expansion of macro ‘R_D_LExp’
63 | #define R_DT_Clog(p) (lower_tail? R_D_LExp(p): R_D_log(p))/* log(1-p) in qF*/
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/exp.h:51:14: note: in expansion of macro ‘R_DT_Clog’
51 | return - R_DT_Clog(p);
| ^~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1086:5: note: ‘std::log’
1086 | log(const complex<_Tp>& __z) { return __complex_log(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:245:21: note: ‘Rcpp::log’
245 | RCPP_SUGAR_COMPLEX( log, Rcomplex )
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:234:5: note: in definition of macro ‘RCPP_SUGAR_COMPLEX’
234 | __NAME__(const VectorBase<CPLXSXP,NA,T>& t) { \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/dpq/macros.h:43:50: error: ‘::expm1’ has not been declared
43 | #define R_Log1_Exp(x) ((x) > -M_LN2 ? ::log(-::expm1(x)) : ::log1p(-::exp(x)))
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/dpq/macros.h:46:34: note: in expansion of macro ‘R_Log1_Exp’
46 | #define R_D_LExp(x) (log_p ? R_Log1_Exp(x) : ::log1p(-x))
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/dpq/macros.h:63:38: note: in expansion of macro ‘R_D_LExp’
63 | #define R_DT_Clog(p) (lower_tail? R_D_LExp(p): R_D_log(p))/* log(1-p) in qF*/
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/exp.h:51:14: note: in expansion of macro ‘R_DT_Clog’
51 | return - R_DT_Clog(p);
| ^~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/dpq/macros.h:43:50: note: suggested alternatives:
43 | #define R_Log1_Exp(x) ((x) > -M_LN2 ? ::log(-::expm1(x)) : ::log1p(-::exp(x)))
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/dpq/macros.h:46:34: note: in expansion of macro ‘R_Log1_Exp’
46 | #define R_D_LExp(x) (log_p ? R_Log1_Exp(x) : ::log1p(-x))
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/dpq/macros.h:63:38: note: in expansion of macro ‘R_D_LExp’
63 | #define R_DT_Clog(p) (lower_tail? R_D_LExp(p): R_D_log(p))/* log(1-p) in qF*/
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/exp.h:51:14: note: in expansion of macro ‘R_DT_Clog’
51 | return - R_DT_Clog(p);
| ^~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2383:5: note: ‘std::expm1’
2383 | expm1(_Tp __x)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:50:19: note: ‘Rcpp::expm1’
50 | VECTORIZED_MATH_1(expm1 , ::expm1 )
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:94:9: note: in definition of macro ‘VECTORIZED_MATH_1’
94 | __NAME__( const VectorBase<INTSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/dpq/macros.h:43:64: error: ‘::log1p’ has not been declared
43 | #define R_Log1_Exp(x) ((x) > -M_LN2 ? ::log(-::expm1(x)) : ::log1p(-::exp(x)))
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/dpq/macros.h:46:34: note: in expansion of macro ‘R_Log1_Exp’
46 | #define R_D_LExp(x) (log_p ? R_Log1_Exp(x) : ::log1p(-x))
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/dpq/macros.h:63:38: note: in expansion of macro ‘R_D_LExp’
63 | #define R_DT_Clog(p) (lower_tail? R_D_LExp(p): R_D_log(p))/* log(1-p) in qF*/
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/exp.h:51:14: note: in expansion of macro ‘R_DT_Clog’
51 | return - R_DT_Clog(p);
| ^~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/dpq/macros.h:43:64: note: suggested alternatives:
43 | #define R_Log1_Exp(x) ((x) > -M_LN2 ? ::log(-::expm1(x)) : ::log1p(-::exp(x)))
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/dpq/macros.h:46:34: note: in expansion of macro ‘R_Log1_Exp’
46 | #define R_D_LExp(x) (log_p ? R_Log1_Exp(x) : ::log1p(-x))
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/dpq/macros.h:63:38: note: in expansion of macro ‘R_D_LExp’
63 | #define R_DT_Clog(p) (lower_tail? R_D_LExp(p): R_D_log(p))/* log(1-p) in qF*/
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/exp.h:51:14: note: in expansion of macro ‘R_DT_Clog’
51 | return - R_DT_Clog(p);
| ^~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2524:5: note: ‘std::log1p’
2524 | log1p(_Tp __x)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:51:19: note: ‘Rcpp::log1p’
51 | VECTORIZED_MATH_1(log1p , ::log1p )
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:94:9: note: in definition of macro ‘VECTORIZED_MATH_1’
94 | __NAME__( const VectorBase<INTSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/dpq/macros.h:43:73: error: ‘::exp’ has not been declared
43 | #define R_Log1_Exp(x) ((x) > -M_LN2 ? ::log(-::expm1(x)) : ::log1p(-::exp(x)))
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/dpq/macros.h:46:34: note: in expansion of macro ‘R_Log1_Exp’
46 | #define R_D_LExp(x) (log_p ? R_Log1_Exp(x) : ::log1p(-x))
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/dpq/macros.h:63:38: note: in expansion of macro ‘R_D_LExp’
63 | #define R_DT_Clog(p) (lower_tail? R_D_LExp(p): R_D_log(p))/* log(1-p) in qF*/
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/exp.h:51:14: note: in expansion of macro ‘R_DT_Clog’
51 | return - R_DT_Clog(p);
| ^~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/dpq/macros.h:43:73: note: suggested alternatives:
43 | #define R_Log1_Exp(x) ((x) > -M_LN2 ? ::log(-::expm1(x)) : ::log1p(-::exp(x)))
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/dpq/macros.h:46:34: note: in expansion of macro ‘R_Log1_Exp’
46 | #define R_D_LExp(x) (log_p ? R_Log1_Exp(x) : ::log1p(-x))
| ^~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/dpq/macros.h:63:38: note: in expansion of macro ‘R_D_LExp’
63 | #define R_DT_Clog(p) (lower_tail? R_D_LExp(p): R_D_log(p))/* log(1-p) in qF*/
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/exp.h:51:14: note: in expansion of macro ‘R_DT_Clog’
51 | return - R_DT_Clog(p);
| ^~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1059:5: note: ‘std::exp’
1059 | exp(const complex<_Tp>& __z) { return __complex_exp(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:244:21: note: ‘Rcpp::exp’
244 | RCPP_SUGAR_COMPLEX( exp, Rcomplex )
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:234:5: note: in definition of macro ‘RCPP_SUGAR_COMPLEX’
234 | __NAME__(const VectorBase<CPLXSXP,NA,T>& t) { \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/dpq/macros.h:46:52: error: ‘::log1p’ has not been declared
46 | #define R_D_LExp(x) (log_p ? R_Log1_Exp(x) : ::log1p(-x))
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/dpq/macros.h:63:38: note: in expansion of macro ‘R_D_LExp’
63 | #define R_DT_Clog(p) (lower_tail? R_D_LExp(p): R_D_log(p))/* log(1-p) in qF*/
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/exp.h:51:14: note: in expansion of macro ‘R_DT_Clog’
51 | return - R_DT_Clog(p);
| ^~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/dpq/macros.h:46:52: note: suggested alternatives:
46 | #define R_D_LExp(x) (log_p ? R_Log1_Exp(x) : ::log1p(-x))
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/dpq/macros.h:63:38: note: in expansion of macro ‘R_D_LExp’
63 | #define R_DT_Clog(p) (lower_tail? R_D_LExp(p): R_D_log(p))/* log(1-p) in qF*/
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/exp.h:51:14: note: in expansion of macro ‘R_DT_Clog’
51 | return - R_DT_Clog(p);
| ^~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2524:5: note: ‘std::log1p’
2524 | log1p(_Tp __x)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:51:19: note: ‘Rcpp::log1p’
51 | VECTORIZED_MATH_1(log1p , ::log1p )
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:94:9: note: in definition of macro ‘VECTORIZED_MATH_1’
94 | __NAME__( const VectorBase<INTSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/dpq/macros.h:39:46: error: ‘::log’ has not been declared
39 | #define R_D_log(p) (log_p ? (p) : ::log(p)) /* log(p) */
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/dpq/macros.h:63:51: note: in expansion of macro ‘R_D_log’
63 | #define R_DT_Clog(p) (lower_tail? R_D_LExp(p): R_D_log(p))/* log(1-p) in qF*/
| ^~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/exp.h:51:14: note: in expansion of macro ‘R_DT_Clog’
51 | return - R_DT_Clog(p);
| ^~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/dpq/macros.h:39:46: note: suggested alternatives:
39 | #define R_D_log(p) (log_p ? (p) : ::log(p)) /* log(p) */
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/dpq/macros.h:63:51: note: in expansion of macro ‘R_D_log’
63 | #define R_DT_Clog(p) (lower_tail? R_D_LExp(p): R_D_log(p))/* log(1-p) in qF*/
| ^~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/exp.h:51:14: note: in expansion of macro ‘R_DT_Clog’
51 | return - R_DT_Clog(p);
| ^~~~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1086:5: note: ‘std::log’
1086 | log(const complex<_Tp>& __z) { return __complex_log(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:245:21: note: ‘Rcpp::log’
245 | RCPP_SUGAR_COMPLEX( log, Rcomplex )
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:234:5: note: in definition of macro ‘RCPP_SUGAR_COMPLEX’
234 | __NAME__(const VectorBase<CPLXSXP,NA,T>& t) { \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/exp.h: In function ‘double Rcpp::stats::p_exp_0(double, int, int)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/exp.h:66:35: error: ‘::log’ has not been declared
66 | ? (x > -M_LN2 ? ::log(-::expm1(x)) : ::log1p(-::exp(x)))
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/exp.h:66:35: note: suggested alternatives:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1086:5: note: ‘std::log’
1086 | log(const complex<_Tp>& __z) { return __complex_log(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:245:21: note: ‘Rcpp::log’
245 | RCPP_SUGAR_COMPLEX( log, Rcomplex )
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:234:5: note: in definition of macro ‘RCPP_SUGAR_COMPLEX’
234 | __NAME__(const VectorBase<CPLXSXP,NA,T>& t) { \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/exp.h:66:42: error: ‘::expm1’ has not been declared
66 | ? (x > -M_LN2 ? ::log(-::expm1(x)) : ::log1p(-::exp(x)))
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/exp.h:66:42: note: suggested alternatives:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2383:5: note: ‘std::expm1’
2383 | expm1(_Tp __x)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:50:19: note: ‘Rcpp::expm1’
50 | VECTORIZED_MATH_1(expm1 , ::expm1 )
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:94:9: note: in definition of macro ‘VECTORIZED_MATH_1’
94 | __NAME__( const VectorBase<INTSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/exp.h:66:56: error: ‘::log1p’ has not been declared
66 | ? (x > -M_LN2 ? ::log(-::expm1(x)) : ::log1p(-::exp(x)))
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/exp.h:66:56: note: suggested alternatives:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2524:5: note: ‘std::log1p’
2524 | log1p(_Tp __x)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:51:19: note: ‘Rcpp::log1p’
51 | VECTORIZED_MATH_1(log1p , ::log1p )
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:94:9: note: in definition of macro ‘VECTORIZED_MATH_1’
94 | __NAME__( const VectorBase<INTSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/exp.h:66:65: error: ‘::exp’ has not been declared
66 | ? (x > -M_LN2 ? ::log(-::expm1(x)) : ::log1p(-::exp(x)))
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/exp.h:66:65: note: suggested alternatives:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1059:5: note: ‘std::exp’
1059 | exp(const complex<_Tp>& __z) { return __complex_exp(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:244:21: note: ‘Rcpp::exp’
244 | RCPP_SUGAR_COMPLEX( exp, Rcomplex )
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:234:5: note: in definition of macro ‘RCPP_SUGAR_COMPLEX’
234 | __NAME__(const VectorBase<CPLXSXP,NA,T>& t) { \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/exp.h:67:22: error: ‘::expm1’ has not been declared
67 | : -::expm1(x));
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/exp.h:67:22: note: suggested alternatives:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/cmath:2383:5: note: ‘std::expm1’
2383 | expm1(_Tp __x)
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/math.h:50:19: note: ‘Rcpp::expm1’
50 | VECTORIZED_MATH_1(expm1 , ::expm1 )
| ^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/block/Vectorized_Math.h:94:9: note: in definition of macro ‘VECTORIZED_MATH_1’
94 | __NAME__( const VectorBase<INTSXP,NA,T>& t ){ \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/dpq/macros.h:38:46: error: ‘::exp’ has not been declared
38 | #define R_D_exp(x) (log_p ? (x) : ::exp(x)) /* exp(x) */
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/exp.h:69:12: note: in expansion of macro ‘R_D_exp’
69 | return R_D_exp(x);
| ^~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/dpq/macros.h:38:46: note: suggested alternatives:
38 | #define R_D_exp(x) (log_p ? (x) : ::exp(x)) /* exp(x) */
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/exp.h:69:12: note: in expansion of macro ‘R_D_exp’
69 | return R_D_exp(x);
| ^~~~~~~
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1059:5: note: ‘std::exp’
1059 | exp(const complex<_Tp>& __z) { return __complex_exp(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:244:21: note: ‘Rcpp::exp’
244 | RCPP_SUGAR_COMPLEX( exp, Rcomplex )
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:234:5: note: in definition of macro ‘RCPP_SUGAR_COMPLEX’
234 | __NAME__(const VectorBase<CPLXSXP,NA,T>& t) { \
| ^~~~~~~~
In file included from /home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/random/random.h:38,
from /home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/stats.h:56:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/random/rlnorm.h: In member function ‘double Rcpp::stats::LNormGenerator::operator()() const’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/random/rlnorm.h:35:18: error: ‘::exp’ has not been declared
35 | return ::exp( meanlog + sdlog * ::norm_rand() ) ;
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/random/rlnorm.h:35:18: note: suggested alternatives:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1059:5: note: ‘std::exp’
1059 | exp(const complex<_Tp>& __z) { return __complex_exp(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:244:21: note: ‘Rcpp::exp’
244 | RCPP_SUGAR_COMPLEX( exp, Rcomplex )
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:234:5: note: in definition of macro ‘RCPP_SUGAR_COMPLEX’
234 | __NAME__(const VectorBase<CPLXSXP,NA,T>& t) { \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/random/rlnorm.h: In member function ‘double Rcpp::stats::LNormGenerator_1::operator()() const’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/random/rlnorm.h:51:18: error: ‘::exp’ has not been declared
51 | return ::exp( meanlog + ::norm_rand() ) ;
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/random/rlnorm.h:51:18: note: suggested alternatives:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1059:5: note: ‘std::exp’
1059 | exp(const complex<_Tp>& __z) { return __complex_exp(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:244:21: note: ‘Rcpp::exp’
244 | RCPP_SUGAR_COMPLEX( exp, Rcomplex )
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:234:5: note: in definition of macro ‘RCPP_SUGAR_COMPLEX’
234 | __NAME__(const VectorBase<CPLXSXP,NA,T>& t) { \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/random/rlnorm.h: In member function ‘double Rcpp::stats::LNormGenerator_0::operator()() const’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/random/rlnorm.h:65:18: error: ‘::exp’ has not been declared
65 | return ::exp(::norm_rand() ) ;
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/random/rlnorm.h:65:18: note: suggested alternatives:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1059:5: note: ‘std::exp’
1059 | exp(const complex<_Tp>& __z) { return __complex_exp(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:244:21: note: ‘Rcpp::exp’
244 | RCPP_SUGAR_COMPLEX( exp, Rcomplex )
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:234:5: note: in definition of macro ‘RCPP_SUGAR_COMPLEX’
234 | __NAME__(const VectorBase<CPLXSXP,NA,T>& t) { \
| ^~~~~~~~
In file included from /home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/random/random.h:42:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/random/rt.h: In member function ‘double Rcpp::stats::TGenerator::operator()() const’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/random/rt.h:41:24: error: ‘::sqrt’ has not been declared
41 | return num / ::sqrt( ::Rf_rgamma(df_2, 2.0) / df);
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/random/rt.h:41:24: note: suggested alternatives:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1195:5: note: ‘std::sqrt’
1195 | sqrt(const complex<_Tp>& __z) { return __complex_sqrt(__z.__rep()); }
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:246:21: note: ‘Rcpp::sqrt’
246 | RCPP_SUGAR_COMPLEX( sqrt, Rcomplex )
| ^~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:234:5: note: in definition of macro ‘RCPP_SUGAR_COMPLEX’
234 | __NAME__(const VectorBase<CPLXSXP,NA,T>& t) { \
| ^~~~~~~~
In file included from /home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/random/random.h:44:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/random/rcauchy.h: In member function ‘double Rcpp::stats::CauchyGenerator::operator()() const’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/random/rcauchy.h:35:37: error: ‘::tan’ has not been declared
35 | return location + scale * ::tan(M_PI * unif_rand()) ;
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/random/rcauchy.h:35:37: note: suggested alternatives:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1222:5: note: ‘std::tan’
1222 | tan(const complex<_Tp>& __z) { return __complex_tan(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:249:21: note: ‘Rcpp::tan’
249 | RCPP_SUGAR_COMPLEX( tan, Rcomplex )
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:234:5: note: in definition of macro ‘RCPP_SUGAR_COMPLEX’
234 | __NAME__(const VectorBase<CPLXSXP,NA,T>& t) { \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/random/rcauchy.h: In member function ‘double Rcpp::stats::CauchyGenerator_1::operator()() const’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/random/rcauchy.h:49:29: error: ‘::tan’ has not been declared
49 | return location + ::tan(M_PI * unif_rand()) ;
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/random/rcauchy.h:49:29: note: suggested alternatives:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1222:5: note: ‘std::tan’
1222 | tan(const complex<_Tp>& __z) { return __complex_tan(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:249:21: note: ‘Rcpp::tan’
249 | RCPP_SUGAR_COMPLEX( tan, Rcomplex )
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:234:5: note: in definition of macro ‘RCPP_SUGAR_COMPLEX’
234 | __NAME__(const VectorBase<CPLXSXP,NA,T>& t) { \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/random/rcauchy.h: In member function ‘double Rcpp::stats::CauchyGenerator_0::operator()() const’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/random/rcauchy.h:62:18: error: ‘::tan’ has not been declared
62 | return ::tan(M_PI * unif_rand()) ;
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/random/rcauchy.h:62:18: note: suggested alternatives:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1222:5: note: ‘std::tan’
1222 | tan(const complex<_Tp>& __z) { return __complex_tan(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:249:21: note: ‘Rcpp::tan’
249 | RCPP_SUGAR_COMPLEX( tan, Rcomplex )
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:234:5: note: in definition of macro ‘RCPP_SUGAR_COMPLEX’
234 | __NAME__(const VectorBase<CPLXSXP,NA,T>& t) { \
| ^~~~~~~~
In file included from /home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/random/random.h:50:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/random/rweibull.h: In member function ‘double Rcpp::stats::WeibullGenerator::operator()() const’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/random/rweibull.h:35:35: error: ‘::log’ has not been declared
35 | return scale * ::R_pow(-::log(unif_rand()), shape_inv );
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/random/rweibull.h:35:35: note: suggested alternatives:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1086:5: note: ‘std::log’
1086 | log(const complex<_Tp>& __z) { return __complex_log(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:245:21: note: ‘Rcpp::log’
245 | RCPP_SUGAR_COMPLEX( log, Rcomplex )
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:234:5: note: in definition of macro ‘RCPP_SUGAR_COMPLEX’
234 | __NAME__(const VectorBase<CPLXSXP,NA,T>& t) { \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/random/rweibull.h: In member function ‘double Rcpp::stats::WeibullGenerator__scale1::operator()() const’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/random/rweibull.h:49:27: error: ‘::log’ has not been declared
49 | return ::R_pow(-::log(unif_rand()), shape_inv );
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/random/rweibull.h:49:27: note: suggested alternatives:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1086:5: note: ‘std::log’
1086 | log(const complex<_Tp>& __z) { return __complex_log(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:245:21: note: ‘Rcpp::log’
245 | RCPP_SUGAR_COMPLEX( log, Rcomplex )
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:234:5: note: in definition of macro ‘RCPP_SUGAR_COMPLEX’
234 | __NAME__(const VectorBase<CPLXSXP,NA,T>& t) { \
| ^~~~~~~~
In file included from /home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/random/random.h:51:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/random/rlogis.h: In member function ‘double Rcpp::stats::LogisGenerator::operator()() const’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/random/rlogis.h:36:37: error: ‘::log’ has not been declared
36 | return location + scale * ::log(u / (1. - u));
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/random/rlogis.h:36:37: note: suggested alternatives:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1086:5: note: ‘std::log’
1086 | log(const complex<_Tp>& __z) { return __complex_log(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:245:21: note: ‘Rcpp::log’
245 | RCPP_SUGAR_COMPLEX( log, Rcomplex )
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:234:5: note: in definition of macro ‘RCPP_SUGAR_COMPLEX’
234 | __NAME__(const VectorBase<CPLXSXP,NA,T>& t) { \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/random/rlogis.h: In member function ‘double Rcpp::stats::LogisGenerator_1::operator()() const’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/random/rlogis.h:53:29: error: ‘::log’ has not been declared
53 | return location + ::log(u / (1. - u));
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/random/rlogis.h:53:29: note: suggested alternatives:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1086:5: note: ‘std::log’
1086 | log(const complex<_Tp>& __z) { return __complex_log(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:245:21: note: ‘Rcpp::log’
245 | RCPP_SUGAR_COMPLEX( log, Rcomplex )
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:234:5: note: in definition of macro ‘RCPP_SUGAR_COMPLEX’
234 | __NAME__(const VectorBase<CPLXSXP,NA,T>& t) { \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/random/rlogis.h: In member function ‘double Rcpp::stats::LogisGenerator_0::operator()() const’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/random/rlogis.h:68:18: error: ‘::log’ has not been declared
68 | return ::log(u / (1. - u));
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/random/rlogis.h:68:18: note: suggested alternatives:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1086:5: note: ‘std::log’
1086 | log(const complex<_Tp>& __z) { return __complex_log(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:245:21: note: ‘Rcpp::log’
245 | RCPP_SUGAR_COMPLEX( log, Rcomplex )
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:234:5: note: in definition of macro ‘RCPP_SUGAR_COMPLEX’
234 | __NAME__(const VectorBase<CPLXSXP,NA,T>& t) { \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/random/random.h: In function ‘Rcpp::NumericVector Rcpp::rlnorm(int, double, double)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/random/random.h:198:36: error: ‘::exp’ has not been declared
198 | return NumericVector( n, ::exp( meanlog ) ) ;
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/random/random.h:198:36: note: suggested alternatives:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1059:5: note: ‘std::exp’
1059 | exp(const complex<_Tp>& __z) { return __complex_exp(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:244:21: note: ‘Rcpp::exp’
244 | RCPP_SUGAR_COMPLEX( exp, Rcomplex )
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:234:5: note: in definition of macro ‘RCPP_SUGAR_COMPLEX’
234 | __NAME__(const VectorBase<CPLXSXP,NA,T>& t) { \
| ^~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/random/random.h: In function ‘Rcpp::NumericVector Rcpp::rlnorm(int, double)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/random/random.h:209:36: error: ‘::exp’ has not been declared
209 | return NumericVector( n, ::exp( meanlog ) ) ;
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/stats/random/random.h:209:36: note: suggested alternatives:
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/complex:1059:5: note: ‘std::exp’
1059 | exp(const complex<_Tp>& __z) { return __complex_exp(__z.__rep()); }
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:244:21: note: ‘Rcpp::exp’
244 | RCPP_SUGAR_COMPLEX( exp, Rcomplex )
| ^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/sugar/functions/complex.h:234:5: note: in definition of macro ‘RCPP_SUGAR_COMPLEX’
234 | __NAME__(const VectorBase<CPLXSXP,NA,T>& t) { \
| ^~~~~~~~
In file included from /home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/api/meat/meat.h:36,
from /home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp.h:91:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/api/meat/DottedPairImpl.h: At global scope:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/api/meat/DottedPairImpl.h:49:51: error: ‘size_t’ does not name a type
49 | void DottedPairImpl<CLASS>::insert( const size_t& index, const T& object) {
| ^~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/api/meat/DottedPairImpl.h:1:1: note: ‘size_t’ is defined in header ‘<cstddef>’; this is probably fixable by adding ‘#include <cstddef>’
+++ |+#include <cstddef>
1 | // Copyright (C) 2013 Romain Francois
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/api/meat/DottedPairImpl.h: In member function ‘void Rcpp::DottedPairImpl<CLASS>::insert(const int&, const T&)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/api/meat/DottedPairImpl.h:67:25: error: ‘size_t’ was not declared in this scope; did you mean ‘std::size_t’?
67 | size_t i=1;
| ^~~~~~
| std::size_t
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/c++config.h:310:33: note: ‘std::size_t’ declared here
310 | typedef __SIZE_TYPE__ size_t;
| ^~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/api/meat/DottedPairImpl.h:69:32: error: ‘i’ was not declared in this scope
69 | while( i < index ){
| ^
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/api/meat/DottedPairImpl.h: At global scope:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/api/meat/DottedPairImpl.h:101:47: error: ‘size_t’ does not name a type
101 | void DottedPairImpl<CLASS>::remove( const size_t& index ) {
| ^~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/api/meat/DottedPairImpl.h:101:47: note: ‘size_t’ is defined in header ‘<cstddef>’; this is probably fixable by adding ‘#include <cstddef>’
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/api/meat/DottedPairImpl.h: In member function ‘void Rcpp::DottedPairImpl<CLASS>::remove(const int&)’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/api/meat/DottedPairImpl.h:116:13: error: ‘size_t’ was not declared in this scope; did you mean ‘std::size_t’?
116 | size_t i=1;
| ^~~~~~
| std::size_t
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/c++config.h:310:33: note: ‘std::size_t’ declared here
310 | typedef __SIZE_TYPE__ size_t;
| ^~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/api/meat/DottedPairImpl.h:117:20: error: ‘i’ was not declared in this scope; did you mean ‘is’?
117 | while( i<index ){ x = CDR(x) ; i++; }
| ^
| is
In file included from /home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/api/meat/meat.h:48:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/api/meat/module/Module.h: In member function ‘Rcpp::List Rcpp::Module::classes_info()’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/api/meat/module/Module.h:26:13: error: ‘size_t’ was not declared in this scope; did you mean ‘std::size_t’?
26 | size_t n = classes.size() ;
| ^~~~~~
| std::size_t
/opt/ohpc/pub/compiler/gcc/14.2.0/include/c++/14.2.0/aarch64-unknown-linux-gnu/bits/c++config.h:310:33: note: ‘std::size_t’ declared here
310 | typedef __SIZE_TYPE__ size_t;
| ^~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/api/meat/module/Module.h:27:35: error: ‘n’ was not declared in this scope; did you mean ‘in’?
27 | CharacterVector names(n) ;
| ^
| in
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/api/meat/module/Module.h:31:24: error: expected ‘;’ before ‘i’
31 | for( size_t i=0; i<n; i++, ++it){
| ^~
| ;
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/api/meat/module/Module.h:31:30: error: ‘i’ was not declared in this scope; did you mean ‘is’?
31 | for( size_t i=0; i<n; i++, ++it){
| ^
| is
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/String.h: In instantiation of ‘Rcpp::String& Rcpp::String::append_wide_string(const T&) [with T = std::__cxx11::basic_string<wchar_t>]’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/String.h:346:85: required from here
346 | inline String& operator+=(const std::wstring& s) { return append_wide_string(s); }
| ~~~~~~~~~~~~~~~~~~^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/String.h:334:47: error: ‘strlen’ was not declared in this scope
334 | std::wstring tmp(buf, buf + strlen(buf));
| ~~~~~~^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/String.h:334:47: note: ‘strlen’ is defined in header ‘<cstring>’; this is probably fixable by adding ‘#include <cstring>’
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/String.h: In instantiation of ‘Rcpp::String& Rcpp::String::append_wide_string(const T&) [with T = const wchar_t*]’:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/String.h:347:80: required from here
347 | inline String& operator+=(const wchar_t* s) { return append_wide_string(s); }
| ~~~~~~~~~~~~~~~~~~^~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/String.h:334:47: error: ‘strlen’ was not declared in this scope
334 | std::wstring tmp(buf, buf + strlen(buf));
| ~~~~~~^~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/String.h:334:47: note: ‘strlen’ is defined in header ‘<cstring>’; this is probably fixable by adding ‘#include <cstring>’
In file included from /home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/RcppCommon.h:133:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/exceptions.h: At global scope:
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/exceptions.h:61:21: warning: inline function ‘void Rcpp::exception::record_stack_trace()’ used but never defined
61 | inline void record_stack_trace();
| ^~~~~~~~~~~~~~~~~~
/home/biocbuild/R/R-4.5.0/site-library/Rcpp/include/Rcpp/exceptions.h:56:21: warning: inline function ‘void Rcpp::exception::copy_stack_trace_to_r() const’ used but never defined
56 | inline void copy_stack_trace_to_r() const;
| ^~~~~~~~~~~~~~~~~~~~~
make: *** [/home/biocbuild/R/R-4.5.0/etc/Makeconf:211: RcppExports.o] Error 1
ERROR: compilation failed for package ‘pqsfinder’
* removing ‘/home/biocbuild/tmp/RtmpuUvACb/Rinstefadc44b7398f/pqsfinder’
-----------------------------------
ERROR: package installation failed