Parichoy Pal Choudhury
| Snapshot Date: 2025-10-23 14:17 -0400 (Thu, 23 Oct 2025) |
| git_url: https://git.bioconductor.org/packages/iCARE |
| git_branch: devel |
| git_last_commit: 7159dc5 |
| git_last_commit_date: 2025-04-15 10:57:47 -0400 (Tue, 15 Apr 2025) |
| Back to Multiple platform build/check report for BioC 3.22: simplified long |
|
This page was generated on 2025-10-24 12:06 -0400 (Fri, 24 Oct 2025).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 24.04.3 LTS) | x86_64 | 4.5.1 Patched (2025-08-23 r88802) -- "Great Square Root" | 4898 |
| lconway | macOS 12.7.6 Monterey | x86_64 | 4.5.1 Patched (2025-09-10 r88807) -- "Great Square Root" | 4688 |
| kjohnson3 | macOS 13.7.7 Ventura | arm64 | 4.5.1 Patched (2025-09-10 r88807) -- "Great Square Root" | 4634 |
| taishan | Linux (openEuler 24.03 LTS) | aarch64 | 4.5.0 (2025-04-11) -- "How About a Twenty-Six" | 4658 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 1023/2359 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| iCARE 1.37.0 (landing page) Parichoy Pal Choudhury
| nebbiolo2 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | WARNINGS | | ||||||||
| lconway | macOS 12.7.6 Monterey / x86_64 | OK | OK | WARNINGS | OK | | ||||||||
| kjohnson3 | macOS 13.7.7 Ventura / arm64 | ERROR | ERROR | skipped | skipped | |||||||||
| taishan | Linux (openEuler 24.03 LTS) / aarch64 | OK | OK | NA | ||||||||||
|
To the developers/maintainers of the iCARE package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/iCARE.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: iCARE |
| Version: 1.37.0 |
| Command: /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data iCARE |
| StartedAt: 2025-10-23 16:45:48 -0400 (Thu, 23 Oct 2025) |
| EndedAt: 2025-10-23 16:45:49 -0400 (Thu, 23 Oct 2025) |
| EllapsedTime: 1.0 seconds |
| RetCode: 1 |
| Status: ERROR |
| PackageFile: None |
| PackageFileSize: NA |
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### Running command:
###
### /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data iCARE
###
##############################################################################
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* checking for file ‘iCARE/DESCRIPTION’ ... OK
* preparing ‘iCARE’:
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to build vignettes
-----------------------------------
* installing *source* package ‘iCARE’ ...
** this is package ‘iCARE’ version ‘1.37.0’
** using staged installation
** libs
using C compiler: ‘Apple clang version 15.0.0 (clang-1500.1.0.2.5)’
using SDK: ‘MacOSX11.3.1.sdk’
clang -arch arm64 -std=gnu2x -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c source.c -o source.o
source.c:45:21: error: unknown type name 'n'
double * dVec_alloc(n, initFlag, initVal)
^
source.c:45:24: error: unknown type name 'initFlag'
double * dVec_alloc(n, initFlag, initVal)
^
source.c:45:34: error: unknown type name 'initVal'
double * dVec_alloc(n, initFlag, initVal)
^
source.c:45:42: error: expected ';' after top level declarator
double * dVec_alloc(n, initFlag, initVal)
^
;
source.c:48:1: error: expected identifier or '('
{
^
source.c:64:18: error: unknown type name 'n'
int * iVec_alloc(n, initFlag, initVal)
^
source.c:64:21: error: unknown type name 'initFlag'
int * iVec_alloc(n, initFlag, initVal)
^
source.c:64:31: error: unknown type name 'initVal'
int * iVec_alloc(n, initFlag, initVal)
^
source.c:64:39: error: expected ';' after top level declarator
int * iVec_alloc(n, initFlag, initVal)
^
;
source.c:65:18: error: redefinition of 'initVal' with a different type: 'int' vs 'double'
int n, initFlag, initVal;
^
source.c:47:8: note: previous definition is here
double initVal;
^
source.c:66:1: error: expected identifier or '('
{
^
source.c:81:22: error: unknown type name 'nrow'
double ** dMat_alloc(nrow, ncol, initFlag, initVal)
^
source.c:81:28: error: unknown type name 'ncol'
double ** dMat_alloc(nrow, ncol, initFlag, initVal)
^
source.c:81:34: error: unknown type name 'initFlag'
double ** dMat_alloc(nrow, ncol, initFlag, initVal)
^
source.c:81:44: error: unknown type name 'initVal'
double ** dMat_alloc(nrow, ncol, initFlag, initVal)
^
source.c:81:52: error: expected ';' after top level declarator
double ** dMat_alloc(nrow, ncol, initFlag, initVal)
^
;
source.c:84:1: error: expected identifier or '('
{
^
source.c:98:18: error: unknown type name 'x'
void matrix_free(x, n)
^
source.c:98:21: error: unknown type name 'n'
void matrix_free(x, n)
^
fatal error: too many errors emitted, stopping now [-ferror-limit=]
20 errors generated.
make: *** [source.o] Error 1
ERROR: compilation failed for package ‘iCARE’
* removing ‘/private/var/folders/r0/l4fjk6cj5xj0j3brt4bplpl40000gt/T/RtmpbSTgXR/Rinst2eaa7e6f1028/iCARE’
-----------------------------------
ERROR: package installation failed