| Back to Multiple platform build/check report for BioC 3.22: simplified long |
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This page was generated on 2025-10-24 12:06 -0400 (Fri, 24 Oct 2025).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 24.04.3 LTS) | x86_64 | 4.5.1 Patched (2025-08-23 r88802) -- "Great Square Root" | 4898 |
| lconway | macOS 12.7.6 Monterey | x86_64 | 4.5.1 Patched (2025-09-10 r88807) -- "Great Square Root" | 4688 |
| kjohnson3 | macOS 13.7.7 Ventura | arm64 | 4.5.1 Patched (2025-09-10 r88807) -- "Great Square Root" | 4634 |
| taishan | Linux (openEuler 24.03 LTS) | aarch64 | 4.5.0 (2025-04-11) -- "How About a Twenty-Six" | 4658 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 1604/2359 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| PIUMA 1.5.0 (landing page) Mattia Chiesa
| nebbiolo2 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | ERROR | skipped | |||||||||
| lconway | macOS 12.7.6 Monterey / x86_64 | OK | ERROR | skipped | skipped | |||||||||
| kjohnson3 | macOS 13.7.7 Ventura / arm64 | OK | ERROR | skipped | skipped | |||||||||
| taishan | Linux (openEuler 24.03 LTS) / aarch64 | OK | ERROR | skipped | ||||||||||
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To the developers/maintainers of the PIUMA package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/PIUMA.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: PIUMA |
| Version: 1.5.0 |
| Command: /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL PIUMA |
| StartedAt: 2025-10-23 15:14:50 -0400 (Thu, 23 Oct 2025) |
| EndedAt: 2025-10-23 15:15:02 -0400 (Thu, 23 Oct 2025) |
| EllapsedTime: 12.0 seconds |
| RetCode: 0 |
| Status: OK |
############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL PIUMA ### ############################################################################## ############################################################################## * installing to library ‘/Library/Frameworks/R.framework/Versions/4.5-arm64/Resources/library’ * installing *source* package ‘PIUMA’ ... ** this is package ‘PIUMA’ version ‘1.5.0’ ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading in method for ‘getOrigData’ with signature ‘x="TDAobj"’: no definition for class “TDAobj” in method for ‘setOrigData’ with signature ‘x="TDAobj"’: no definition for class “TDAobj” in method for ‘getScaledData’ with signature ‘x="TDAobj"’: no definition for class “TDAobj” in method for ‘setScaledData’ with signature ‘x="TDAobj"’: no definition for class “TDAobj” in method for ‘getOutcomeFact’ with signature ‘x="TDAobj"’: no definition for class “TDAobj” in method for ‘setOutcomeFact’ with signature ‘x="TDAobj"’: no definition for class “TDAobj” in method for ‘getOutcome’ with signature ‘x="TDAobj"’: no definition for class “TDAobj” in method for ‘setOutcome’ with signature ‘x="TDAobj"’: no definition for class “TDAobj” in method for ‘getComp’ with signature ‘x="TDAobj"’: no definition for class “TDAobj” in method for ‘setComp’ with signature ‘x="TDAobj"’: no definition for class “TDAobj” in method for ‘getDistMat’ with signature ‘x="TDAobj"’: no definition for class “TDAobj” in method for ‘setDistMat’ with signature ‘x="TDAobj"’: no definition for class “TDAobj” in method for ‘getDfMapper’ with signature ‘x="TDAobj"’: no definition for class “TDAobj” in method for ‘setDfMapper’ with signature ‘x="TDAobj"’: no definition for class “TDAobj” in method for ‘getJacc’ with signature ‘x="TDAobj"’: no definition for class “TDAobj” in method for ‘setJacc’ with signature ‘x="TDAobj"’: no definition for class “TDAobj” in method for ‘getNodeDataMat’ with signature ‘x="TDAobj"’: no definition for class “TDAobj” in method for ‘setNodeDataMat’ with signature ‘x="TDAobj"’: no definition for class “TDAobj” ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (PIUMA)