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###
### Running command:
###
###   /home/biocbuild/R/R/bin/R CMD build --keep-empty-dirs --no-resave-data CBN2Path
###
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* checking for file ‘CBN2Path/DESCRIPTION’ ... OK
* preparing ‘CBN2Path’:
* checking DESCRIPTION meta-information ... OK
* cleaning src
* running ‘cleanup’
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘CBN2Path.Rmd’ using rmarkdown
/usr/bin/gtar: 5aac7195-f3e8-4597-97f3-edf16d36e14b/2e2be62b-e217-4a4c-b67c-d31dcf0530eb.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:30:41.1532636 is 0.83821693 s in the future
/usr/bin/gtar: 5bf92209-1c54-482f-b3bc-89c97dbcac29/9c8adba2-7fd4-49a1-ae2a-035565928f3f.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:30:41.1569397 is 0.84172582 s in the future
/usr/bin/gtar: 5ca43972-df03-484f-b171-fba1568ad282/3b1dd6d8-c4e6-44ef-92c9-13a4ca70e7ff.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:30:41.1598027 is 0.84417246 s in the future
/usr/bin/gtar: 5d158ce0-7d4e-4d09-97af-e9f3c6ebbe3a/bd807421-e472-4ca0-a153-0429639fccd8.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:30:41.1748993 is 0.85822585 s in the future
/usr/bin/gtar: 5e1b7a27-edf5-4a0c-8dff-6ab64fc67a89/838eeb66-ac96-4cec-99b0-1eff4607bab8.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:30:42.3453028 is 2.0281767 s in the future
/usr/bin/gtar: 5e6f129f-d78d-428c-978b-c2e790341bce/1deff211-f17b-4e7f-b3f7-c20ce20a5b93.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:30:42.349001 is 2.03155268 s in the future
/usr/bin/gtar: 5eb33bf1-b58e-4b29-ab67-8d152abf10ab/333c0519-0b97-4fc3-8840-bdb82851c06d.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:30:42.3835 is 2.06589519 s in the future
/usr/bin/gtar: 5f783bfc-a741-4fdd-8297-e069d990e431/8e9b7a76-13c8-426e-af46-2bb315f0261b.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:30:42.4023907 is 2.08469428 s in the future
/usr/bin/gtar: 5f85cad1-b9b1-4a29-b0e6-c09c64d111d4/43bbbe14-abc6-4661-b63c-4d227dd74014.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:30:42.4053152 is 2.08739106 s in the future
/usr/bin/gtar: 6051eb5a-c106-49ce-a3ba-e73a42617bd0/9de89786-01ff-451b-9c4e-70868096a576.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:30:42.4091425 is 2.09018015 s in the future
/usr/bin/gtar: 612ca73f-8018-48fe-a58e-cefb95da5266/32985e88-4669-4640-9ba7-a795343f40f4.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:30:42.4345944 is 2.11553417 s in the future
/usr/bin/gtar: 613d08ba-b2a6-43d3-b1d8-39fcd37b3ae2/1b468536-c710-4af5-9d9e-88c43279eb0f.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:30:42.43586 is 2.11647776 s in the future
/usr/bin/gtar: 61500de2-0dd6-4f5e-80b4-d9f7b1abf5c0/93b48470-3c24-42f7-af48-dbbedd96b06f.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:30:42.4394329 is 2.11966183 s in the future
/usr/bin/gtar: 62987ae6-687f-4b06-a29d-322451aed3fe/93635fd2-1390-4e67-9fc0-f654f769bb4a.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:30:42.905952 is 2.58605044 s in the future
/usr/bin/gtar: 634e7f81-d802-4990-b0bd-de84315f012f/6c9893f0-f99b-4d53-9629-5ddc958169c1.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:30:42.907986 is 2.58775975 s in the future
/usr/bin/gtar: 6381f6dd-8141-4806-af2e-ab11b81d4516/e7112fbb-a82f-409c-ab07-a60ca97e3dbe.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:30:42.9121523 is 2.59175447 s in the future
/usr/bin/gtar: 657a2ee1-582e-4be4-9ce8-694e3aaaea5b/dfa093b2-3029-4146-8098-8b731ede6bab.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:30:42.9152274 is 2.59376211 s in the future
/usr/bin/gtar: 669a953c-105e-4a71-b367-2397b70ef914/c34f708b-f166-4c03-a60e-2ac5d0bcbc63.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:30:43.3454552 is 3.02359545 s in the future
/usr/bin/gtar: 67f925c6-c504-4533-9421-299ae5b1040d/ff442ad2-e65d-4bef-aae7-511b1fa4be82.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:30:43.8575842 is 3.5353105 s in the future
/usr/bin/gtar: 68134a32-a7d0-4029-a294-c79a66c301e4/ad1a714b-b3fc-43d0-b73b-d21be6038fc9.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:30:43.868377 is 3.54571201 s in the future
/usr/bin/gtar: 69509bb2-5497-445f-b469-e0d982899aad/8643b913-889a-4c7a-b1a1-7700002ed00d.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:30:43.8734035 is 3.55040942 s in the future
/usr/bin/gtar: 6acd3a54-009a-44fd-9e50-0def655bd088/b06411c7-f092-4efe-ad68-e6859c11785e.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:30:43.8826666 is 3.55953929 s in the future
/usr/bin/gtar: 6b77b9cb-935a-4098-84cd-00e146571448/a1509f19-0097-4447-b758-44be70679faa.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:30:43.8861423 is 3.56284025 s in the future
/usr/bin/gtar: 6bdeef8a-bc39-4cdc-b048-ae66418629f8/68b9738f-3834-4012-b66a-c656a620f624.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:30:43.8910446 is 3.56638798 s in the future
/usr/bin/gtar: 6c9f1ca9-fd10-4463-bcc7-f8b5386ac1cf/6872b987-427c-4bf3-bdd5-34f57e2cd2e6.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:30:44.1264653 is 3.80129021 s in the future
/usr/bin/gtar: 6de4846e-15e1-4fca-8635-3baa49be26c6/f8775d59-908c-48da-8edc-e9bb31eaa1fc.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:30:44.1357338 is 3.80994473 s in the future
/usr/bin/gtar: 6e5ee816-6745-4ff1-9339-b74b8758b8ad/32e812ca-9558-4278-be12-0637d3720470.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:30:44.3587496 is 4.03283464 s in the future
/usr/bin/gtar: 6e9a94a3-0f00-42ba-8858-df0a64f6a239/3bcc1549-fc1e-47da-90b0-f8fb61b689d8.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:30:44.3607867 is 4.03432886 s in the future
/usr/bin/gtar: 6f7147cf-68f1-4fdd-b5eb-f04a0eab6684/295b5569-1ef4-4d76-93f2-135f9fd3815f.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:30:44.3752842 is 4.04802964 s in the future
/usr/bin/gtar: 70ac32ba-ffab-43e2-b343-125846bb9de0/a8360e32-eaef-4103-a953-2d3cefcc5033.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:30:44.393852 is 4.06628259 s in the future
/usr/bin/gtar: 72009084-d285-46a9-8d23-f9b7bb0d5cd7/22d39c9b-be5c-47c7-8fa5-e510d3b3b73b.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:30:44.3981955 is 4.07036408 s in the future
/usr/bin/gtar: 72efbbcd-9a15-4ef7-9d68-5fedf52a9337/266703cd-e899-4b9e-9ed4-4c049c3081a3.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:30:44.4063904 is 4.07839999 s in the future
/usr/bin/gtar: 72fc9f70-9a4f-45d7-a139-8616a6b3bc18/d54673f8-4c15-481f-be73-d6bd3847dc69.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:30:44.4089532 is 4.08082471 s in the future
/usr/bin/gtar: 73a4fa04-cdf2-44fb-805a-ed37f9d71794/f028f58b-7607-4680-ba84-758f33809185.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:30:44.410421 is 4.08116618 s in the future
/usr/bin/gtar: 7432be91-fcc3-444c-a974-3c35d98b2ef2/3f04e8e0-5ad5-47e8-b59d-4f8938007e84.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:30:44.8704154 is 4.54083413 s in the future
/usr/bin/gtar: 75521f74-aa93-465c-9635-7e268ad1dd48/ff251d6e-2c30-4e53-80c2-50dc7267ccf7.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:30:44.8827052 is 4.55280825 s in the future
/usr/bin/gtar: 75539c46-e6ad-4742-9e82-f97141295c72/a0020382-65d7-4d67-b980-31eb04d280f1.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:30:44.9246085 is 4.59460885 s in the future
/usr/bin/gtar: 75cde6b4-0a91-4b52-aec6-372381203253/303cea97-e6e0-42e5-8930-1248293dbccf.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:30:44.9454298 is 4.61493478 s in the future
/usr/bin/gtar: 762daebc-5c06-422c-a1ba-36d826578489/314e2171-29b7-4342-9c7a-7b667068d741.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:30:45.14443 is 4.81330963 s in the future
/usr/bin/gtar: 76315a89-fa58-43d6-be21-183c3ff24b3e/ea93da65-64e9-4afa-999a-6f8218553112.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:30:45.158165 is 4.82653957 s in the future
/usr/bin/gtar: 76bf9f5d-607c-4b00-9921-88ee1665e773/ba8820b4-3d25-439c-a376-a6b4b7d4550f.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:33:00.8047354 is 140.47271917 s in the future
/usr/bin/gtar: 76da3517-06c5-4d52-ac27-c8c5616e24bd/b5db8ebf-4beb-4fb0-8c83-2d8be214357a.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:33:00.830208 is 140.4978374 s in the future
/usr/bin/gtar: 76f7c595-6b1a-47d5-9504-c94d63809d5a/2fe1287f-5557-407e-8952-d651698ace97.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:33:00.9251366 is 140.59232424 s in the future
/usr/bin/gtar: 77b926d5-9bcc-4553-996b-46d76faa8a71/3dfd9a60-ae42-45cb-b884-a33bacfb2fb7.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:33:00.9363437 is 140.60336147 s in the future
/usr/bin/gtar: 77eff4e5-76ef-4da2-a699-a64282ca3b5d/9531bd28-7627-473a-adf4-1f176a2de756.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:33:00.9412978 is 140.6075083 s in the future
/usr/bin/gtar: 7982c369-1ced-4aab-b7b1-be41f5a846af/03c46be1-5552-45d2-9cb7-eb0846f6906e.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:33:00.957554 is 140.6213897 s in the future
/usr/bin/gtar: 79a2bdc9-9f4a-4ad0-8189-961441f42ee4/5bb7764e-67f1-436a-8ce2-03e28c6c610d.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:01.6296751 is 261.29234738 s in the future
/usr/bin/gtar: 79d6460e-be34-46c6-a85a-fba811b24c9b/b01a5366-1e6a-43ed-83e0-ecee8164e830.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:05.1015406 is 264.76374041 s in the future
/usr/bin/gtar: 79e6d789-82d7-4acd-99ee-df83bf65f8c7/6f09880c-b33b-4f53-a39f-030cd201fcbd.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:05.1065602 is 264.76842501 s in the future
/usr/bin/gtar: 7a170b2f-57de-44ba-ba85-56c17851fd62/6be7d416-1308-4e1d-8e31-40a8c8db3961.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:08.111365 is 267.77282526 s in the future
/usr/bin/gtar: 7a5c2a52-8661-42eb-a366-1837d8f3ffdf/5b42a962-c30e-4bed-9b94-865fcf9ceb4a.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:08.1209972 is 267.78232418 s in the future
/usr/bin/gtar: 7ad31858-36bc-4870-977e-12e531a6e6d3/3f0d2d70-59a4-48d8-8c47-5bcc2daf772a.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:08.1236055 is 267.78431398 s in the future
/usr/bin/gtar: 7b8625a8-2ac6-4d3a-983a-31e3bdd7522e/081c007e-3d83-46c4-a125-76025e992077.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:08.129215 is 267.78981359 s in the future
/usr/bin/gtar: 7bf7f691-8110-4e1d-8716-bf2cd7ced706/da20a5fd-0fe7-41b2-996b-2bc474a8aa3a.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:08.1312716 is 267.7917767 s in the future
/usr/bin/gtar: 7c7bdd9f-9a2d-4cf9-ba60-9d8401209e99/b921d23e-ebdb-4ceb-9219-83380680a9c6.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:08.1329217 is 267.79239559 s in the future
/usr/bin/gtar: 7e05cf48-2d72-40a6-9e21-0788130098fc/c8f258f6-c5a8-4a97-b51d-a3840aebc5aa.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:10.1245773 is 269.78387126 s in the future
/usr/bin/gtar: 7e8ec974-4a55-4b28-9fa4-fee0a244f876/6719311f-96d8-49d5-b506-9c535ca2372b.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:10.1278703 is 269.78697858 s in the future
/usr/bin/gtar: 7e8ef9f3-ec43-4918-bbee-6c9e57cedbdb/f9682660-c675-4b40-8aa6-94ea01982fa0.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:10.1355884 is 269.79457748 s in the future
/usr/bin/gtar: 7ecaa3c7-ce60-44b5-acb6-2d446eff9154/7571ec10-29ae-45c2-be20-85b2dfb58716.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:10.1381073 is 269.79692302 s in the future
/usr/bin/gtar: 7ff3d59e-14e5-45af-b867-4e5e3e01f357/3ec91fdd-da8b-49cd-925c-13cf3487861b.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:10.1411507 is 269.7993077 s in the future
/usr/bin/gtar: 80932c1f-8b98-492e-a3c2-322220311830/57fe0120-ab19-4a49-b624-91ea7fdc3bd5.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:12.3606932 is 272.01873354 s in the future
/usr/bin/gtar: 81421f7e-7a0c-40bc-968a-fb10c326eb05/d085e56e-6818-458a-8187-58afa4101bf1.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:12.3625433 is 272.0203028 s in the future
/usr/bin/gtar: 8304eb09-4428-4a42-bb1a-9d7cd548fb03/8ce8a6f4-5bc9-4caf-9eaa-25739052ea36.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:12.3659172 is 272.02358446 s in the future
/usr/bin/gtar: 84081222-ebcf-4eb7-a78a-4226bcb9db7b/43865023-9b9f-48e9-891f-66b490cbaa75.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:13.6177528 is 273.27484904 s in the future
/usr/bin/gtar: 84423da3-1a8f-48f4-b308-2d680805ff71/016f6127-be12-4d55-9a0b-6dde2b3bebdf.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:13.6313062 is 273.28822628 s in the future
/usr/bin/gtar: 84a434b9-2b55-420e-8ae6-70ef4792e665/22ab1889-c55d-4ffe-a184-003a9136e82a.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:13.641279 is 273.2978355 s in the future
/usr/bin/gtar: 84e9825c-6367-415a-a86d-077789b7d224/9ccca5b7-efe2-4479-a97d-ef1de9f13d5b.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:13.6464407 is 273.30154538 s in the future
/usr/bin/gtar: 85c8e1e9-2538-4e97-b8c7-a1453a9ba1c8/16c2f25f-336b-455d-8af4-69e52f253687.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:14.1196222 is 273.77410386 s in the future
/usr/bin/gtar: 86e9832d-8abe-43a6-b950-7408dc7dee80/240eb695-bb3e-4a0a-976e-0d26f602bba3.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:15.4099474 is 275.06416503 s in the future
/usr/bin/gtar: 8799d717-202d-429d-b44a-7fd1c877816b/867838ab-4477-4978-b950-39c95e6bc60f.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:15.4141273 is 275.06788479 s in the future
/usr/bin/gtar: 87ac25f3-698b-40d5-a8b2-d19bbfdfca5c/5c77cfc1-d56b-413d-b5e3-00578333fa76.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:15.4191272 is 275.07267411 s in the future
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/usr/bin/gtar: 8923acfe-51a2-427e-ba40-42cac87ee9ea/29957c02-7e8d-4165-90c0-2a380e3870a0.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:16.8714828 is 276.52313268 s in the future
/usr/bin/gtar: 89936855-2392-479a-8873-2ca5ad849daf/68fdd037-7c5e-490c-a330-377d3277b0e7.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:16.9291127 is 276.57969999 s in the future
/usr/bin/gtar: 8b58e1b7-e4c6-4ced-91fc-cc6be789b76f/3ac614e4-d518-48f3-bc63-977decabf979.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:17.6199436 is 277.26996359 s in the future
/usr/bin/gtar: 8b5af67f-514a-4d74-b665-80f4ec34e7ba/75254525-58b5-4e66-af47-e19dfb01e1f4.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:18.4193861 is 278.06912985 s in the future
/usr/bin/gtar: 8c3e91e8-dd09-4f4a-86b9-6ec6f04f4e0a/fdab99d3-963c-47f0-a941-a41b05538970.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:18.4313707 is 278.08078425 s in the future
/usr/bin/gtar: 8cef621f-ca7e-4539-8934-39bbb0be3656/a94c4159-9dbb-4aa9-aa94-c253c4f83ddd.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:18.459484 is 278.10862767 s in the future
/usr/bin/gtar: 8e82524e-f5d2-4781-8833-d5792e6746b4/4081db99-915b-49fa-8e9d-ba582fb6fb19.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:18.4676948 is 278.11650627 s in the future
/usr/bin/gtar: 8e88087b-329b-4a61-806d-f507ba40a655/dc04d0e2-157c-43b8-a3c6-e1cd2dfd885a.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:19.1455905 is 278.79413947 s in the future
/usr/bin/gtar: 8ee7461c-128e-45e9-adb8-213962a6ddcd/cdb5800a-1bd9-49c9-9d81-2d31f76f25d8.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:19.153674 is 278.80213165 s in the future
/usr/bin/gtar: 8f9d424a-42c0-4daf-b5b7-3663b5eeb3bb/ba87b4c3-c1f3-43e9-b424-261ae275e4ad.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:19.1565876 is 278.8039628 s in the future
/usr/bin/gtar: 90febf98-6fb6-43c4-a59f-4c8473f593b0/f255e25c-5d72-4d5f-8fb0-cc33e3d8e10d.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:19.912887 is 279.55970308 s in the future
/usr/bin/gtar: 915ec260-f344-49cd-8d0f-6167a47019a7/40d05f41-6a29-4320-9537-abe2114e3a6d.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:19.933562 is 279.58028614 s in the future
/usr/bin/gtar: 92260246-ab6c-4ddf-9604-817bcee9a788/8454a5cc-0940-43ad-a270-03840f5b595b.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:19.9355042 is 279.5815826 s in the future
/usr/bin/gtar: 929650d9-c278-4665-bf19-ed224664e165/725f17dc-3b82-4067-99e3-e15236555c40.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:20.6363285 is 280.28191197 s in the future
/usr/bin/gtar: 93321e72-7ce3-4c03-9319-2197745f839b/e2edd198-7eaa-476b-bcda-fdb8d5016151.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:20.6444147 is 280.28964266 s in the future
/usr/bin/gtar: 938a901a-da98-4f08-9c4b-819597cced99/07b8802b-d048-4dcc-869e-2791f665dc9f.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:20.6502883 is 280.29535306 s in the future
/usr/bin/gtar: 93973a62-ab8b-4648-b78e-e0dfadc9c6b5/47cca7b2-f109-4080-9c40-8db5aca6c678.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:20.652151 is 280.2968971 s in the future
/usr/bin/gtar: 93c7647d-0fa9-493a-8f24-610ba32b0876/5bf77cbb-16b6-4435-952d-b655345d0420.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:21.1302373 is 280.77456323 s in the future
/usr/bin/gtar: 93ff8782-2ea1-4c5d-a1fd-5524a498ee71/a4039e80-f6f7-40cf-b5bd-59b1a5606082.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:21.1364424 is 280.78047629 s in the future
/usr/bin/gtar: 945634e7-475e-4025-bb26-1e7406944ce0/cc0e1c51-4d29-4c79-9d08-90854fa2f78c.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:21.6289043 is 281.27254361 s in the future
/usr/bin/gtar: 9485c3e3-463e-45aa-9167-61649d3ec711/36d566ea-51d7-48b9-8487-14cc177f315f.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:21.6409929 is 281.28412719 s in the future
/usr/bin/gtar: 94ad4c90-79f0-42a5-85d2-bed43dadefb8/f800f82d-0df9-415e-b315-6cffdb391caf.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:21.647382 is 281.29028703 s in the future
/usr/bin/gtar: 94e2713c-3d09-4b1f-9059-582ccf3c2008/63543358-012c-4e3b-8a30-b64e32e5bb7b.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:21.671483 is 281.31316145 s in the future
/usr/bin/gtar: 96ae8c68-2960-419f-9795-6f3ab16a5618/a557ddd8-0c4e-4af6-a7a1-2c9f8406542f.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:22.3719978 is 282.01348506 s in the future
/usr/bin/gtar: 96cc3034-85c4-425d-9f78-25949f78d63c/d7eab38b-5dad-4f7d-a287-f5f05ae45f37.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:23.1033256 is 282.74465472 s in the future
/usr/bin/gtar: 96fe06fc-13e3-4528-a346-6cd25b1eeb84/f0cb7dbd-ed78-4f8d-980c-0a3a323bdfda.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:23.1055205 is 282.74613465 s in the future
/usr/bin/gtar: 97413baa-7696-4da4-be70-f34f53165620/ec8ad234-82be-43bc-90bb-b1368961f850.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:23.1180828 is 282.75831752 s in the future
/usr/bin/gtar: 9801b5b8-bcfa-43a5-b212-765bd85bbf74/aa70a914-8df1-43cd-a1b0-e3824de754b4.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:23.1238573 is 282.76393405 s in the future
/usr/bin/gtar: 98fcf3fe-157e-436a-a6e3-9b4439e5f632/57a55892-4662-4f7a-a8b1-6f20a71c7576.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:23.1445367 is 282.7844312 s in the future
/usr/bin/gtar: 997d91a6-0299-470a-a1ff-a60a6ac9c39f/5367f03d-d8c8-4cc3-a15b-0761c3db6831.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:23.6116364 is 283.25139665 s in the future
/usr/bin/gtar: 99cdcc72-e027-44b0-8128-79e2b9f6836d/511bb983-7a62-4989-9521-bb0ab5868870.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:23.6168568 is 283.25594141 s in the future
/usr/bin/gtar: 9a654266-eb47-46de-ab9c-63132f9b8704/4aa9cbde-b8db-4959-898a-e93dbf8cc466.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:23.6402206 is 283.27913868 s in the future
/usr/bin/gtar: 9a750138-af56-4b31-bc7c-980673d82f40/c267edc3-c546-464b-80cc-e72a8d3dd227.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:23.6541748 is 283.29248593 s in the future
/usr/bin/gtar: 9e3a7482-2792-4625-819a-93e12be9923f/ab613b36-c1cb-45b6-9794-809b595d87aa.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:24.1064012 is 283.74441159 s in the future
/usr/bin/gtar: a0f15bfe-82d8-42ca-a2cb-c2fbd0329891/94d5ec81-cabf-454d-8760-530574d15569.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:24.1133158 is 283.75071017 s in the future
/usr/bin/gtar: a1cf348d-fe27-43e6-8bf7-17a7b1f5cae7/2da9d061-2b25-4562-9297-e083ea8efbde.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:24.136764 is 283.77407319 s in the future
/usr/bin/gtar: a207564a-469a-4073-81fc-92a8eae26125/5a3fef20-a6c9-40bc-81c2-bc97a0acabaa.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:24.137472 is 283.77343593 s in the future
/usr/bin/gtar: a25d9743-d752-4069-9504-eb82c83ec1ff/0ff118af-1e5f-4536-b1ed-ace2df79ec57.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:25.6138895 is 285.24936984 s in the future
/usr/bin/gtar: a38b80ba-cd44-4e19-8815-9f3263d5640d/9ee09409-430b-49b0-9619-67759863122e.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:25.632014 is 285.2668486 s in the future
/usr/bin/gtar: a49785a4-c849-4eb2-b020-bfe122870bc6/3a142613-437f-41d8-9426-230e845800aa.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:25.6474195 is 285.28146523 s in the future
/usr/bin/gtar: a84ce5a0-4411-460f-94bc-adcd2b2dcec6/bde0403c-04f2-4d91-903a-1f77237a48ac.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:25.8716733 is 285.505292 s in the future
/usr/bin/gtar: a8613684-86e7-4e65-876e-2a27a628e2b3/c3c2d0c2-10b1-4ac3-a1a0-a1faadaeabd8.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:25.876343 is 285.5098355 s in the future
/usr/bin/gtar: a8657378-eca3-4b53-b64b-953a0ecb8d16/16774ae5-a30e-4b88-85eb-d593b29b2fc7.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:25.8779607 is 285.51132201 s in the future
/usr/bin/gtar: a8e73c42-961e-4467-a678-0cb2f4e8ae19/957b4188-8e07-479c-ad66-14efb0bfb569.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:25.87952 is 285.51196235 s in the future
/usr/bin/gtar: aae8226b-8965-433e-bacb-671421f0891b/6af030cd-ead0-46a7-893f-a153d6b6195f.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:26.8658922 is 286.49789198 s in the future
/usr/bin/gtar: ab54d615-5341-41b2-ad6d-682ba0fa51dc/db9cc2b3-a1ac-47cd-8fd4-a8339ff0e3b9.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:26.8723578 is 286.50311251 s in the future
/usr/bin/gtar: abfd51bf-9af2-4560-a4e5-42d2443c6c24/e6a0c2ec-4a0c-493f-b9f2-c1fec5b59db5.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:27.358933 is 286.98956093 s in the future
/usr/bin/gtar: ad04140e-bc5f-4cde-af10-cea54d647041/4ed3a61b-409b-43d3-aca0-dc7229e52360.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:27.361467 is 286.99172561 s in the future
/usr/bin/gtar: ad7ac878-c23c-46ee-88ab-db60175ab9b1/5aea20ea-1535-4cec-9a78-224eaa337bf3.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:27.3746307 is 287.00460671 s in the future
/usr/bin/gtar: adb46945-63d9-41a3-b412-b3616b453be4/702a845a-4d3c-4065-8460-4063cbe608a4.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:27.3777144 is 287.0073094 s in the future
/usr/bin/gtar: ae26543d-712d-459e-9aa2-8fecfbc39132/abaf44ac-1960-4e5b-a3f6-9cf315c1d60c.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:27.8675005 is 287.49666578 s in the future
/usr/bin/gtar: ae9b394e-a06a-4f48-a3f0-f46a1844fc76/da88d683-2b8e-4062-8b66-67ece1ebfcfb.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:27.8953006 is 287.52429554 s in the future
/usr/bin/gtar: aed3dcb1-9f29-49ae-b6a6-1a3633bf7878/f98b0f76-a7e5-4ba0-a429-3ffbf6cac505.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:27.899425 is 287.52798725 s in the future
/usr/bin/gtar: b138acdf-dea2-483d-a2e2-9df4b0fe599f/193c5cc8-c035-4f30-b85f-83a4fe993f38.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:28.131703 is 287.76009325 s in the future
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/usr/bin/gtar: b3f18fd9-18a1-4343-bcbf-aff130e4eb58/053cc86b-a9f2-411e-a5b7-7ba8ac4cb670.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:28.2141418 is 287.84128495 s in the future
/usr/bin/gtar: b3f4e257-a077-43b3-bd30-588589139018/5120fa79-20c1-4e07-b155-f11397db0c90.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:28.2377472 is 287.86410884 s in the future
/usr/bin/gtar: b43dfb07-f8f0-45db-9b95-e8d619d1a650/d4505594-f294-43f7-a1a2-a9c110f59541.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:28.8882327 is 288.51438804 s in the future
/usr/bin/gtar: b71a03df-8099-41c8-ac18-e6c17a5d3383/555b3048-4ede-4453-8032-103c9be8a4a8.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:28.8914 is 288.51610224 s in the future
/usr/bin/gtar: b72c93cc-7332-43d1-ac7e-808866b732cf/30033e4f-180c-4aea-b18b-e393d58178f5.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:29.864474 is 289.48877555 s in the future
/usr/bin/gtar: b77511f7-cdb6-432c-9044-d71efbeccb4c/fcb226b7-0cdf-4a6d-b13a-17da6be800ce.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:29.8793223 is 289.50343062 s in the future
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/usr/bin/gtar: c07ab382-b15e-4466-9d0b-ecb0966c0852/44c30b2f-7023-4e95-8dc3-39f393d2324c.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:31.1621053 is 290.78173742 s in the future
/usr/bin/gtar: c09813c8-f8ce-4201-9b25-5b721f52e946/4737787f-93ae-4ac1-9bf7-f03fa4384139.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:31.1712186 is 290.79054401 s in the future
/usr/bin/gtar: c0e8c4c5-375c-4ef9-8035-84c7caeab51c/5fdf1fe1-7a5b-4258-bde3-18e0f8c1702d.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:31.3673751 is 290.9861973 s in the future
/usr/bin/gtar: c2bd3b33-d8e5-4d67-8be7-de2e3a7df34a/19da9a2d-6aea-4826-9fb1-ed30322e7211.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:31.3733203 is 290.99154945 s in the future
/usr/bin/gtar: c3329f1d-667b-4547-a392-d1bdbc953a26/b86c836e-1eb7-456c-8a86-297a252e8734.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:32.1359499 is 291.75356503 s in the future
/usr/bin/gtar: c3498d57-ec6b-415c-95e3-89b37bac7b08/b3756487-45b3-4f5d-b602-b516209161c1.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:32.1428723 is 291.76033836 s in the future
/usr/bin/gtar: c3de9dac-3a91-4dd6-9e14-2b6c02d53287/dcc0e457-cfd7-48b3-9718-1ef8f575b81f.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:32.1515017 is 291.76869581 s in the future
/usr/bin/gtar: c4bc8d11-2931-410a-b48c-b498ae99052b/d4467fdc-6ef7-4369-8df0-9cd6114142cd.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:32.1632228 is 291.77983179 s in the future
/usr/bin/gtar: c603acbd-10a9-4020-9c01-d447f1de4182/85445f37-d03f-4daf-b176-f3bce72bbac9.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:32.4105244 is 292.02509719 s in the future
/usr/bin/gtar: c6dfadb5-8e7d-45e9-84af-479faed6417c/346ab67c-0f57-4797-b526-e6cd4c1b048a.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:33.378366 is 292.99264473 s in the future
/usr/bin/gtar: c796752c-47f3-40fc-a19f-bce6de437b04/6ea6ca74-9a05-4ae0-821a-6db042bf754d.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:33.381442 is 292.99534821 s in the future
/usr/bin/gtar: c8020372-f2ee-4b24-8f2d-d8378de03530/c8d56d5f-795e-4810-bfdb-ff380aab8240.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:33.3851244 is 292.99894129 s in the future
/usr/bin/gtar: c839360a-36e5-41d0-b9ba-33579c459387/70f77a8a-7ae7-4d5f-8231-23136d8a2121.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:33.3902001 is 293.0027696 s in the future
/usr/bin/gtar: c8459e65-540a-47d0-bc20-47702f3c4f19/8dd5c052-b294-4537-8e13-30e50c20a767.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:33.6388211 is 293.25129034 s in the future
/usr/bin/gtar: c8d8d690-9cb7-4e9d-a40e-02cb25c5df4b/deb0e19f-185b-49df-9760-dcd662b3d371.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:33.6398854 is 293.25225439 s in the future
/usr/bin/gtar: c91b3229-a81a-4266-a619-f1014fa257ff/4540758a-0b03-4f41-99b6-544beddd5cca.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:33.6418598 is 293.25366419 s in the future
/usr/bin/gtar: c91bf42d-c4cb-4133-b027-dba13b4e9d0f/fb1d5120-1aed-453c-a52f-e690c763d753.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:34.1444304 is 293.75566749 s in the future
/usr/bin/gtar: c93f9ec6-5385-4513-affc-69d32985cbb0/d1aa7b60-dab6-4389-8f0e-d34088a25b84.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:34.1624136 is 293.77338343 s in the future
/usr/bin/gtar: c9c97ac9-97ef-41ba-bda3-8b21fd75ebfb/0081a7c1-e615-4aca-af29-e342e25e0b19.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:34.1672366 is 293.77806337 s in the future
/usr/bin/gtar: ca61a613-a530-473c-9459-7dfbb868be8c/359c63e4-e9c5-4386-9f47-dbb9038f262a.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:34.383227 is 293.99388534 s in the future
/usr/bin/gtar: ca727e51-9d6c-4556-bf4e-4aa439e214ff/63387b6d-f542-4b7b-9532-e9fd251d21af.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:34.3932536 is 294.00358131 s in the future
/usr/bin/gtar: ca7e11b5-39c8-4cee-9834-c073d5ecdb8a/d5660978-a064-44aa-bfdf-f2448b4643d2.wxs.aliquot_ensemble_masked.maf.gz: time stamp 2025-11-14 00:35:34.4099705 is 294.01956181 s in the future

gzip: stdin: unexpected end of file
/usr/bin/gtar: Unexpected EOF in archive
/usr/bin/gtar: Unexpected EOF in archive
/usr/bin/gtar: Error is not recoverable: exiting now

Quitting from CBN2Path.Rmd:54-64 [unnamed-chunk-4]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `GDCprepare()`:
! I couldn't find all the files from the query. Please check if the directory parameter is right or `GDCdownload` downloaded the samples.
---
Backtrace:
    ▆
 1. └─CBN2Path::getRawTCGAData("TCGA-BLCA")
 2.   └─TCGAbiolinks::GDCprepare(query)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

Error: processing vignette 'CBN2Path.Rmd' failed with diagnostics:
I couldn't find all the files from the query. Please check if the directory parameter is right or `GDCdownload` downloaded the samples.
--- failed re-building ‘CBN2Path.Rmd’

SUMMARY: processing the following file failed:
  ‘CBN2Path.Rmd’

Error: Vignette re-building failed.
Execution halted