Britta Velten
| Snapshot Date: 2024-10-16 14:00 -0400 (Wed, 16 Oct 2024) |
| git_url: https://git.bioconductor.org/packages/graper |
| git_branch: RELEASE_3_19 |
| git_last_commit: a4dfa52 |
| git_last_commit_date: 2024-04-30 11:11:42 -0400 (Tue, 30 Apr 2024) |
| Back to Multiple platform build/check report for BioC 3.19: simplified long |
|
This page was generated on 2024-10-18 20:38 -0400 (Fri, 18 Oct 2024).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 22.04.3 LTS) | x86_64 | 4.4.1 (2024-06-14) -- "Race for Your Life" | 4763 |
| palomino7 | Windows Server 2022 Datacenter | x64 | 4.4.1 (2024-06-14 ucrt) -- "Race for Your Life" | 4500 |
| merida1 | macOS 12.7.5 Monterey | x86_64 | 4.4.1 (2024-06-14) -- "Race for Your Life" | 4530 |
| kjohnson1 | macOS 13.6.6 Ventura | arm64 | 4.4.1 (2024-06-14) -- "Race for Your Life" | 4480 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 908/2300 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| graper 1.20.0 (landing page) Britta Velten
| nebbiolo1 | Linux (Ubuntu 22.04.3 LTS) / x86_64 | OK | OK | OK | | ||||||||
| palomino7 | Windows Server 2022 Datacenter / x64 | OK | OK | OK | OK | | ||||||||
| merida1 | macOS 12.7.5 Monterey / x86_64 | OK | OK | WARNINGS | OK | | ||||||||
| kjohnson1 | macOS 13.6.6 Ventura / arm64 | OK | OK | WARNINGS | OK | | ||||||||
|
To the developers/maintainers of the graper package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: graper |
| Version: 1.20.0 |
| Command: /home/biocbuild/bbs-3.19-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.19-bioc/R/site-library --timings graper_1.20.0.tar.gz |
| StartedAt: 2024-10-17 01:07:41 -0400 (Thu, 17 Oct 2024) |
| EndedAt: 2024-10-17 01:09:03 -0400 (Thu, 17 Oct 2024) |
| EllapsedTime: 82.2 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: graper.Rcheck |
| Warnings: 0 |
##############################################################################
##############################################################################
###
### Running command:
###
### /home/biocbuild/bbs-3.19-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.19-bioc/R/site-library --timings graper_1.20.0.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/home/biocbuild/bbs-3.19-bioc/meat/graper.Rcheck’
* using R version 4.4.1 (2024-06-14)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
gcc (Ubuntu 11.4.0-1ubuntu1~22.04) 11.4.0
GNU Fortran (Ubuntu 11.4.0-1ubuntu1~22.04) 11.4.0
* running under: Ubuntu 22.04.5 LTS
* using session charset: UTF-8
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.20.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* used C++ compiler: ‘g++ (Ubuntu 11.4.0-1ubuntu1~22.04) 11.4.0’
* checking C++ specification ... NOTE
Specified C++11: please drop specification unless essential
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... NOTE
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘testthat.R’
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... OK
* checking PDF version of manual ... OK
* DONE
Status: 3 NOTEs
See
‘/home/biocbuild/bbs-3.19-bioc/meat/graper.Rcheck/00check.log’
for details.
graper.Rcheck/00install.out
##############################################################################
##############################################################################
###
### Running command:
###
### /home/biocbuild/bbs-3.19-bioc/R/bin/R CMD INSTALL graper
###
##############################################################################
##############################################################################
* installing to library ‘/home/biocbuild/bbs-3.19-bioc/R/site-library’
* installing *source* package ‘graper’ ...
** using staged installation
** libs
using C++ compiler: ‘g++ (Ubuntu 11.4.0-1ubuntu1~22.04) 11.4.0’
using C++11
g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.19-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.19-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.19-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.19-bioc/R/site-library/BH/include' -I/usr/local/include -fpic -g -O2 -Wall -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.19-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.19-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.19-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.19-bioc/R/site-library/BH/include' -I/usr/local/include -fpic -g -O2 -Wall -c fit_graper.cpp -o fit_graper.o
In file included from /home/biocbuild/bbs-3.19-bioc/R/site-library/BH/include/boost/math/special_functions/detail/round_fwd.hpp:11,
from /home/biocbuild/bbs-3.19-bioc/R/site-library/BH/include/boost/math/special_functions/math_fwd.hpp:29,
from /home/biocbuild/bbs-3.19-bioc/R/site-library/BH/include/boost/math/special_functions/digamma.hpp:15,
from graper_linear_dense_ff.h:2,
from fit_graper.cpp:4:
/home/biocbuild/bbs-3.19-bioc/R/site-library/BH/include/boost/math/tools/config.hpp:23:6: warning: #warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" [-Wcpp]
23 | # warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)"
| ^~~~~~~
g++ -std=gnu++11 -shared -L/home/biocbuild/bbs-3.19-bioc/R/lib -L/usr/local/lib -o graper.so RcppExports.o fit_graper.o -llapack -L/home/biocbuild/bbs-3.19-bioc/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/biocbuild/bbs-3.19-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.19-bioc/R/site-library/00LOCK-graper/00new/graper/libs
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (graper)
graper.Rcheck/tests/testthat.Rout
R version 4.4.1 (2024-06-14) -- "Race for Your Life"
Copyright (C) 2024 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(testthat)
> library(graper)
>
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-868.206
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-568.256
ELB improved by 299.951
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-510.121
ELB improved by 58.1348
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-474.766
ELB improved by 35.3546
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-459.714
ELB improved by 15.0519
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-453.815
ELB improved by 5.89984
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.558
ELB improved by 3.25661
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.945
ELB improved by 2.6133
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.498
ELB improved by 2.44714
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.029
ELB improved by 2.46813
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.419
ELB improved by 2.61009
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.575
ELB improved by 2.84462
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.458
ELB improved by 3.11641
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.164
ELB improved by 3.29463
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.984
ELB improved by 3.17956
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.33
ELB improved by 2.65456
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.431
ELB improved by 1.89834
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.193
ELB improved by 1.23813
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.383
ELB improved by 0.810182
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.821
ELB improved by 0.562142
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.406
ELB improved by 0.415036
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.084
ELB improved by 0.321993
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.824
ELB improved by 0.259949
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.607
ELB improved by 0.216737
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.422
ELB improved by 0.185238
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.261
ELB improved by 0.161145
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.119
ELB improved by 0.141849
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.993
ELB improved by 0.125787
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.881
ELB improved by 0.112052
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.781
ELB improved by 0.100153
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.691
ELB improved by 0.0898333
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.61
ELB improved by 0.0809429
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.537
ELB improved by 0.0733497
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.47
ELB improved by 0.0669045
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.408
ELB improved by 0.0614419
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.352
ELB improved by 0.0567969
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.299
ELB improved by 0.0528206
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.249
ELB improved by 0.0493882
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.203
ELB improved by 0.0463997
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.159
ELB improved by 0.0437768
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.118
ELB improved by 0.0414586
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.078
ELB improved by 0.0393973
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.041
ELB improved by 0.0375547
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.005
ELB improved by 0.0359002
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.97
ELB improved by 0.034408
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.937
ELB improved by 0.033057
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.906
ELB improved by 0.0318289
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.875
ELB improved by 0.0307084
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.845
ELB improved by 0.029682
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.816
ELB improved by 0.0287382
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.789
ELB improved by 0.0278669
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.762
ELB improved by 0.0270595
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.735
ELB improved by 0.0263083
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.71
ELB improved by 0.0256069
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.685
ELB improved by 0.0249495
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.66
ELB improved by 0.0243314
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.637
ELB improved by 0.0237483
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.613
ELB improved by 0.0231968
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.591
ELB improved by 0.0226739
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.569
ELB improved by 0.0221771
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.547
ELB improved by 0.0217045
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.526
ELB improved by 0.0212543
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.505
ELB improved by 0.0208252
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.484
ELB improved by 0.0204162
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.464
ELB improved by 0.0200264
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.445
ELB improved by 0.0196551
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.425
ELB improved by 0.019302
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.406
ELB improved by 0.0189665
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.388
ELB improved by 0.0186483
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.369
ELB improved by 0.0183472
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.351
ELB improved by 0.0180628
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.334
ELB improved by 0.0177949
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.316
ELB improved by 0.0175432
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.299
ELB improved by 0.0173074
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.282
ELB improved by 0.0170872
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.265
ELB improved by 0.0168821
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.248
ELB improved by 0.0166918
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.231
ELB improved by 0.0165157
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.215
ELB improved by 0.0163533
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.199
ELB improved by 0.0162041
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.183
ELB improved by 0.0160674
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.167
ELB improved by 0.0159426
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.151
ELB improved by 0.0158289
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.135
ELB improved by 0.0157258
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.12
ELB improved by 0.0156323
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.104
ELB improved by 0.0155479
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.089
ELB improved by 0.0154715
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.073
ELB improved by 0.0154026
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.058
ELB improved by 0.0153402
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.043
ELB improved by 0.0152836
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.027
ELB improved by 0.0152318
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.012
ELB improved by 0.0151842
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.997
ELB improved by 0.0151397
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.982
ELB improved by 0.0150977
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.967
ELB improved by 0.0150572
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.952
ELB improved by 0.0150175
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.937
ELB improved by 0.0149777
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.922
ELB improved by 0.014937
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.907
ELB improved by 0.0148946
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.892
ELB improved by 0.0148497
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.877
ELB improved by 0.0148016
iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.863
ELB improved by 0.0147495
iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.848
ELB improved by 0.0146928
iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.833
ELB improved by 0.0146307
iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.819
ELB improved by 0.0145627
iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.804
ELB improved by 0.0144881
iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.79
ELB improved by 0.0144065
iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.776
ELB improved by 0.0143172
iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.761
ELB improved by 0.0142201
iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.747
ELB improved by 0.0141146
iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.733
ELB improved by 0.0140005
iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.719
ELB improved by 0.0138777
iteration 113
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.706
ELB improved by 0.013746
iteration 114
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.692
ELB improved by 0.0136055
iteration 115
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.679
ELB improved by 0.0134561
iteration 116
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.665
ELB improved by 0.0132982
iteration 117
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.652
ELB improved by 0.013132
iteration 118
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.639
ELB improved by 0.0129578
iteration 119
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.626
ELB improved by 0.0127762
iteration 120
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.614
ELB improved by 0.0125877
iteration 121
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.601
ELB improved by 0.0123931
iteration 122
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.589
ELB improved by 0.0121931
iteration 123
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.577
ELB improved by 0.0119887
iteration 124
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.566
ELB improved by 0.0117809
iteration 125
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.554
ELB improved by 0.0115708
iteration 126
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.543
ELB improved by 0.0113597
iteration 127
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.531
ELB improved by 0.011149
iteration 128
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.52
ELB improved by 0.0109401
iteration 129
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.51
ELB improved by 0.0107347
iteration 130
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.499
ELB improved by 0.0105348
iteration 131
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.489
ELB improved by 0.0103422
iteration 132
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.479
ELB improved by 0.0101595
iteration 133
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.469
ELB improved by 0.00998918
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-901.016
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-602.2
ELB improved by 298.817
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-540.531
ELB improved by 61.6689
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-493.672
ELB improved by 46.8591
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-469.977
ELB improved by 23.6944
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-460.051
ELB improved by 9.92575
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-454.551
ELB improved by 5.50034
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.291
ELB improved by 4.25998
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.377
ELB improved by 3.9142
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.527
ELB improved by 3.85019
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.684
ELB improved by 3.84249
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.954
ELB improved by 3.73041
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.56
ELB improved by 3.39435
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.738
ELB improved by 2.82122
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.609
ELB improved by 2.12885
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.116
ELB improved by 1.49385
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.089
ELB improved by 1.02654
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.36
ELB improved by 0.72876
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.809
ELB improved by 0.551188
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.363
ELB improved by 0.445914
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.982
ELB improved by 0.381543
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.641
ELB improved by 0.340496
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.328
ELB improved by 0.313479
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.032
ELB improved by 0.295546
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.748
ELB improved by 0.283817
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.472
ELB improved by 0.276123
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.202
ELB improved by 0.270185
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.939
ELB improved by 0.263439
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.685
ELB improved by 0.253744
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.444
ELB improved by 0.24046
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.22
ELB improved by 0.224607
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.012
ELB improved by 0.207922
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.82
ELB improved by 0.191883
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.643
ELB improved by 0.177394
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.478
ELB improved by 0.164906
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.323
ELB improved by 0.154601
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.177
ELB improved by 0.146516
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.036
ELB improved by 0.140545
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.9
ELB improved by 0.136363
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.766
ELB improved by 0.13333
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.636
ELB improved by 0.130518
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.509
ELB improved by 0.12702
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.386
ELB improved by 0.122415
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.269
ELB improved by 0.116959
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.158
ELB improved by 0.111311
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.052
ELB improved by 0.106095
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.95
ELB improved by 0.101693
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.852
ELB improved by 0.0982731
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.756
ELB improved by 0.0958943
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.662
ELB improved by 0.0945555
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.567
ELB improved by 0.0941685
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.473
ELB improved by 0.0944554
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.378
ELB improved by 0.0948212
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.284
ELB improved by 0.0943455
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.192
ELB improved by 0.0920817
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.104
ELB improved by 0.0876116
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.023
ELB improved by 0.0813598
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.948
ELB improved by 0.0742781
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.881
ELB improved by 0.0672419
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.82
ELB improved by 0.0607365
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.766
ELB improved by 0.0549112
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.716
ELB improved by 0.0497471
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.671
ELB improved by 0.0451727
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.63
ELB improved by 0.0411134
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.592
ELB improved by 0.0375046
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.558
ELB improved by 0.0342929
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.526
ELB improved by 0.0314337
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.497
ELB improved by 0.0288897
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.471
ELB improved by 0.0266297
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.446
ELB improved by 0.0246274
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.423
ELB improved by 0.0228612
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.402
ELB improved by 0.0213133
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.382
ELB improved by 0.0199694
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.363
ELB improved by 0.018819
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.345
ELB improved by 0.0178554
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.328
ELB improved by 0.0170755
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.312
ELB improved by 0.0164806
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.296
ELB improved by 0.0160763
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.28
ELB improved by 0.0158723
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.264
ELB improved by 0.0158821
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.248
ELB improved by 0.0161197
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.231
ELB improved by 0.0165944
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.214
ELB improved by 0.0173011
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.196
ELB improved by 0.0182052
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.176
ELB improved by 0.0192251
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.156
ELB improved by 0.0202198
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.135
ELB improved by 0.0209964
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.114
ELB improved by 0.0213501
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.093
ELB improved by 0.0211323
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.072
ELB improved by 0.020313
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.053
ELB improved by 0.0189969
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.036
ELB improved by 0.0173803
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.02
ELB improved by 0.0156798
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.006
ELB improved by 0.0140741
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.994
ELB improved by 0.0126809
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.982
ELB improved by 0.0115595
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.971
ELB improved by 0.0107278
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.961
ELB improved by 0.0101777
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.951
ELB improved by 0.00988742
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-855.316
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-555.388
ELB improved by 299.929
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-496.705
ELB improved by 58.6822
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-464.772
ELB improved by 31.9338
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.689
ELB improved by 14.0822
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.313
ELB improved by 8.3766
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.564
ELB improved by 7.74886
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.734
ELB improved by 8.83037
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.968
ELB improved by 9.76518
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.158
ELB improved by 8.80996
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.916
ELB improved by 6.24215
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.975
ELB improved by 3.94154
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.374
ELB improved by 2.60087
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.452
ELB improved by 1.92185
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.869
ELB improved by 1.58322
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.447
ELB improved by 1.42177
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.057
ELB improved by 1.38996
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.497
ELB improved by 1.55974
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.322
ELB improved by 2.17569
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.311
ELB improved by 3.01045
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.11
ELB improved by 3.20105
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-375.201
ELB improved by 2.90912
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.53
ELB improved by 2.67141
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-370.045
ELB improved by 2.48459
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-367.813
ELB improved by 2.23187
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-365.934
ELB improved by 1.87906
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-364.477
ELB improved by 1.45682
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-363.43
ELB improved by 1.04768
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-362.707
ELB improved by 0.722937
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-362.209
ELB improved by 0.497673
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-361.858
ELB improved by 0.351199
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-361.601
ELB improved by 0.256967
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-361.406
ELB improved by 0.194903
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-361.253
ELB improved by 0.152398
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-361.131
ELB improved by 0.122054
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-361.032
ELB improved by 0.0995701
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-360.949
ELB improved by 0.0823865
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-360.881
ELB improved by 0.0689249
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-360.822
ELB improved by 0.0581712
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-360.773
ELB improved by 0.049448
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-360.731
ELB improved by 0.0422862
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-360.694
ELB improved by 0.03635
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-360.663
ELB improved by 0.0313923
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-360.636
ELB improved by 0.0272262
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-360.612
ELB improved by 0.0237078
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-360.591
ELB improved by 0.0207239
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-360.573
ELB improved by 0.0181842
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-360.557
ELB improved by 0.0160158
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-360.543
ELB improved by 0.0141593
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-360.53
ELB improved by 0.0125657
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-360.519
ELB improved by 0.0111946
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-360.509
ELB improved by 0.0100122
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-360.5
ELB improved by 0.00899024
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-893.305
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-581.278
ELB improved by 312.027
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-523.589
ELB improved by 57.6888
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-486.046
ELB improved by 37.5429
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-467.115
ELB improved by 18.9313
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-457.574
ELB improved by 9.54126
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-451.29
ELB improved by 6.28363
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.938
ELB improved by 5.35181
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.718
ELB improved by 5.22033
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.405
ELB improved by 5.31276
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.227
ELB improved by 5.17819
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.686
ELB improved by 4.54077
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.175
ELB improved by 3.51113
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.696
ELB improved by 2.47868
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.997
ELB improved by 1.69919
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.817
ELB improved by 1.18046
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.976
ELB improved by 0.840351
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.363
ELB improved by 0.613379
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.903
ELB improved by 0.460189
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.547
ELB improved by 0.35556
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.264
ELB improved by 0.282937
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.033
ELB improved by 0.231543
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.838
ELB improved by 0.194313
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.672
ELB improved by 0.166649
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.526
ELB improved by 0.145602
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.397
ELB improved by 0.129288
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.28
ELB improved by 0.116482
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.174
ELB improved by 0.106364
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.076
ELB improved by 0.0983671
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.984
ELB improved by 0.0920888
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.896
ELB improved by 0.0872369
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.813
ELB improved by 0.0835975
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.732
ELB improved by 0.0810142
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.652
ELB improved by 0.0793737
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.574
ELB improved by 0.0785975
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.495
ELB improved by 0.0786348
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.416
ELB improved by 0.0794586
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.335
ELB improved by 0.0810628
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.251
ELB improved by 0.0834605
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.164
ELB improved by 0.0866825
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.074
ELB improved by 0.0907766
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.978
ELB improved by 0.0958075
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.876
ELB improved by 0.101855
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.767
ELB improved by 0.109012
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.65
ELB improved by 0.117383
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.523
ELB improved by 0.127078
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.384
ELB improved by 0.138199
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.234
ELB improved by 0.150832
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.068
ELB improved by 0.165019
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.888
ELB improved by 0.180725
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.69
ELB improved by 0.197797
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.474
ELB improved by 0.215907
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.24
ELB improved by 0.234499
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.987
ELB improved by 0.252756
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.717
ELB improved by 0.269609
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.433
ELB improved by 0.28383
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.139
ELB improved by 0.294201
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.839
ELB improved by 0.299726
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.54
ELB improved by 0.299824
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.245
ELB improved by 0.294446
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.961
ELB improved by 0.284068
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.692
ELB improved by 0.269583
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.439
ELB improved by 0.252114
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.207
ELB improved by 0.23282
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.994
ELB improved by 0.212733
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.801
ELB improved by 0.192671
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.628
ELB improved by 0.17322
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.473
ELB improved by 0.154774
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.336
ELB improved by 0.13758
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.214
ELB improved by 0.121785
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.106
ELB improved by 0.10746
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.012
ELB improved by 0.0946163
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.929
ELB improved by 0.0832105
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.855
ELB improved by 0.0731599
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.791
ELB improved by 0.0643538
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.734
ELB improved by 0.0566673
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.684
ELB improved by 0.0499727
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.64
ELB improved by 0.0441472
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.601
ELB improved by 0.0390777
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.566
ELB improved by 0.0346629
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.536
ELB improved by 0.0308135
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.508
ELB improved by 0.0274522
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.484
ELB improved by 0.0245121
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.462
ELB improved by 0.0219357
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.442
ELB improved by 0.0196738
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.424
ELB improved by 0.0176843
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.408
ELB improved by 0.015931
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.394
ELB improved by 0.014383
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.381
ELB improved by 0.0130137
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.369
ELB improved by 0.0118002
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.359
ELB improved by 0.0107229
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.349
ELB improved by 0.00976474
ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
>
> proc.time()
user system elapsed
2.046 0.163 2.199
graper.Rcheck/graper-Ex.timings
| name | user | system | elapsed | |
| coef.graper | 0.054 | 0.015 | 0.069 | |
| getPIPs | 0.047 | 0.015 | 0.061 | |
| graper | 0.084 | 0.020 | 0.104 | |
| makeExampleData | 0.011 | 0.000 | 0.011 | |
| makeExampleDataWithUnequalGroups | 0.013 | 0.000 | 0.013 | |
| plotELBO | 0.212 | 0.040 | 0.252 | |
| plotGroupPenalties | 0.719 | 0.012 | 0.731 | |
| plotPosterior | 0.607 | 0.028 | 0.635 | |
| predict.graper | 2.042 | 0.096 | 2.138 | |
| print.graper | 0.053 | 0.012 | 0.065 | |