Multiple platform build/check report for BioC 3.19 - CHECK results for graper on kjohnson1

Hostname	OS	Arch (*)	R version	Installed pkgs
nebbiolo1	Linux (Ubuntu 22.04.3 LTS)	x86_64	4.4.1 (2024-06-14) -- "Race for Your Life"	4763
palomino7	Windows Server 2022 Datacenter	x64	4.4.1 (2024-06-14 ucrt) -- "Race for Your Life"	4500
merida1	macOS 12.7.5 Monterey	x86_64	4.4.1 (2024-06-14) -- "Race for Your Life"	4530
kjohnson1	macOS 13.6.6 Ventura	arm64	4.4.1 (2024-06-14) -- "Race for Your Life"	4480
Click on any hostname to see more info about the system (e.g. compilers) () as reported by 'uname -p', except on Windows and Mac OS X*

CHECK results for graper on kjohnson1

To the developers/maintainers of the graper package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results

Summary

Package: graper

Version: 1.20.0

Command: /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:graper.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings graper_1.20.0.tar.gz

StartedAt: 2024-10-17 23:49:55 -0400 (Thu, 17 Oct 2024)

EndedAt: 2024-10-17 23:51:08 -0400 (Thu, 17 Oct 2024)

EllapsedTime: 72.8 seconds

RetCode: 0

Status: WARNINGS

CheckDir: graper.Rcheck

Warnings: 1

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:graper.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings graper_1.20.0.tar.gz
###
##############################################################################
##############################################################################


* using log directory ‘/Users/biocbuild/bbs-3.19-bioc/meat/graper.Rcheck’
* using R version 4.4.1 (2024-06-14)
* using platform: aarch64-apple-darwin20
* R was compiled by
    Apple clang version 14.0.0 (clang-1400.0.29.202)
    GNU Fortran (GCC) 12.2.0
* running under: macOS Ventura 13.6.6
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.20.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... WARNING
Found the following significant warnings:
  /Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library/BH/include/boost/math/tools/config.hpp:23:6: warning: "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" [-W#warnings]
  #    warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)"
See ‘/Users/biocbuild/bbs-3.19-bioc/meat/graper.Rcheck/00install.out’ for details.
* used C++ compiler: ‘Apple clang version 15.0.0 (clang-1500.0.40.1)’
* used SDK: ‘MacOSX11.3.sdk’
* checking C++ specification ... NOTE
  Specified C++11: please drop specification unless essential
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... NOTE
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
  Running ‘testthat.R’
 OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE

Status: 1 WARNING, 3 NOTEs
See
  ‘/Users/biocbuild/bbs-3.19-bioc/meat/graper.Rcheck/00check.log’
for details.

Installation output

graper.Rcheck/00install.out

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL graper
###
##############################################################################
##############################################################################


* installing to library ‘/Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library’
* installing *source* package ‘graper’ ...
** using staged installation
** libs
using C++ compiler: ‘Apple clang version 15.0.0 (clang-1500.0.40.1)’
using C++11
using SDK: ‘MacOSX11.3.sdk’
clang++ -arch arm64 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library/RcppArmadillo/include' -I'/Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library/BH/include' -I/opt/R/arm64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c RcppExports.cpp -o RcppExports.o
clang++ -arch arm64 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library/RcppArmadillo/include' -I'/Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library/BH/include' -I/opt/R/arm64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c fit_graper.cpp -o fit_graper.o
In file included from fit_graper.cpp:4:
In file included from ./graper_linear_dense_ff.h:2:
In file included from /Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library/BH/include/boost/math/special_functions/digamma.hpp:15:
In file included from /Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library/BH/include/boost/math/special_functions/math_fwd.hpp:29:
In file included from /Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library/BH/include/boost/math/special_functions/detail/round_fwd.hpp:11:
/Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library/BH/include/boost/math/tools/config.hpp:23:6: warning: "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" [-W#warnings]
#    warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)"
     ^
1 warning generated.
clang++ -arch arm64 -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/arm64/lib -o graper.so RcppExports.o fit_graper.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/opt/gfortran/lib/gcc/aarch64-apple-darwin20.0/12.2.0 -L/opt/gfortran/lib -lgfortran -lemutls_w -lquadmath -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library/00LOCK-graper/00new/graper/libs
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (graper)

Tests output

graper.Rcheck/tests/testthat.Rout


R version 4.4.1 (2024-06-14) -- "Race for Your Life"
Copyright (C) 2024 The R Foundation for Statistical Computing
Platform: aarch64-apple-darwin20

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> library(testthat)
> library(graper)
> 
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-867.751
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-563.593
ELB improved by 304.157

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-504.818
ELB improved by 58.7749

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-473.366
ELB improved by 31.4526

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-460.401
ELB improved by 12.9649

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-454.479
ELB improved by 5.92171

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.399
ELB improved by 4.08007

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.719
ELB improved by 3.67964

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.034
ELB improved by 3.68524

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.252
ELB improved by 3.78231

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.509
ELB improved by 3.74289

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.076
ELB improved by 3.43254

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.196
ELB improved by 2.88019

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.964
ELB improved by 2.23266

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.324
ELB improved by 1.63967

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.146
ELB improved by 1.17744

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.299
ELB improved by 0.847821

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.676
ELB improved by 0.62275

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.203
ELB improved by 0.472679

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.83
ELB improved by 0.373289

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.523
ELB improved by 0.306603

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.263
ELB improved by 0.260658

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.035
ELB improved by 0.228058

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.83
ELB improved by 0.204365

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.643
ELB improved by 0.186901

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.469
ELB improved by 0.174007

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.305
ELB improved by 0.164617

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.147
ELB improved by 0.158016

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.993
ELB improved by 0.153716

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.842
ELB improved by 0.15138

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.691
ELB improved by 0.150789

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.539
ELB improved by 0.151824

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.384
ELB improved by 0.154475

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.226
ELB improved by 0.158857

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.06
ELB improved by 0.165268

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.886
ELB improved by 0.174279

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.699
ELB improved by 0.186895

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.494
ELB improved by 0.204814

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.264
ELB improved by 0.230784

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.995
ELB improved by 0.26877

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.672
ELB improved by 0.322864

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.279
ELB improved by 0.392964

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.809
ELB improved by 0.469484

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.27
ELB improved by 0.539282

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.67
ELB improved by 0.599879

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.014
ELB improved by 0.656136

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.306
ELB improved by 0.708417

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.555
ELB improved by 0.750888

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.78
ELB improved by 0.774643

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.009
ELB improved by 0.771081

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.274
ELB improved by 0.735389

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.605
ELB improved by 0.669032

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.025
ELB improved by 0.579934

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.544
ELB improved by 0.480333

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.161
ELB improved by 0.383228

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.863
ELB improved by 0.298723

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.63
ELB improved by 0.232208

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.445
ELB improved by 0.185282

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.287
ELB improved by 0.158298

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.134
ELB improved by 0.153027

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.96
ELB improved by 0.174217

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.733
ELB improved by 0.226712

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.43
ELB improved by 0.302574

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.058
ELB improved by 0.371755

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.651
ELB improved by 0.407807

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.26
ELB improved by 0.390519

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.957
ELB improved by 0.30265

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.758
ELB improved by 0.199731

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.628
ELB improved by 0.129773

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.541
ELB improved by 0.0871627

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.481
ELB improved by 0.0599717

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.438
ELB improved by 0.0423883

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.407
ELB improved by 0.0311557

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.383
ELB improved by 0.0239708

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.364
ELB improved by 0.0192557

iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.348
ELB improved by 0.0160231

iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.334
ELB improved by 0.0136917

iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.322
ELB improved by 0.0119284

iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.312
ELB improved by 0.010542

iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.302
ELB improved by 0.00942007

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-921.843
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-586.375
ELB improved by 335.468

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-527.976
ELB improved by 58.399

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-494.108
ELB improved by 33.8682

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-480.014
ELB improved by 14.0937

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-474.022
ELB improved by 5.99195

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-470.244
ELB improved by 3.77856

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-467.204
ELB improved by 3.04007

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-464.478
ELB improved by 2.72518

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-461.939
ELB improved by 2.5395

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-459.556
ELB improved by 2.38281

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-457.339
ELB improved by 2.21718

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-455.314
ELB improved by 2.02543

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-453.509
ELB improved by 1.80437

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-451.946
ELB improved by 1.56329

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.628
ELB improved by 1.31833

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.542
ELB improved by 1.0857

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.664
ELB improved by 0.877521

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.964
ELB improved by 0.700587

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.407
ELB improved by 0.556598

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.964
ELB improved by 0.443305

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.608
ELB improved by 0.356166

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.318
ELB improved by 0.289935

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.078
ELB improved by 0.239729

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.876
ELB improved by 0.201499

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.704
ELB improved by 0.172105

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.555
ELB improved by 0.149209

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.424
ELB improved by 0.131111

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.307
ELB improved by 0.116593

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.203
ELB improved by 0.104785

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.108
ELB improved by 0.0950668

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.021
ELB improved by 0.0869907

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.94
ELB improved by 0.0802304

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.866
ELB improved by 0.0745441

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.796
ELB improved by 0.0697501

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.73
ELB improved by 0.0657098

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.668
ELB improved by 0.0623158

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.609
ELB improved by 0.0594846

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.551
ELB improved by 0.0571499

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.496
ELB improved by 0.0552594

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.442
ELB improved by 0.0537712

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.39
ELB improved by 0.0526516

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.338
ELB improved by 0.0518731

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.286
ELB improved by 0.0514131

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.235
ELB improved by 0.0512517

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.184
ELB improved by 0.0513703

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.132
ELB improved by 0.0517503

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.08
ELB improved by 0.0523703

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.027
ELB improved by 0.0532046

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.972
ELB improved by 0.0542207

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.917
ELB improved by 0.0553774

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.86
ELB improved by 0.0566231

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.802
ELB improved by 0.0578961

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.743
ELB improved by 0.0591265

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.683
ELB improved by 0.0602405

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.622
ELB improved by 0.061167

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.56
ELB improved by 0.0618457

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.498
ELB improved by 0.0622329

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.435
ELB improved by 0.0623061

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.373
ELB improved by 0.0620633

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.312
ELB improved by 0.06152

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.251
ELB improved by 0.0607037

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.192
ELB improved by 0.0596496

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.133
ELB improved by 0.0583972

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.076
ELB improved by 0.0569884

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.021
ELB improved by 0.0554665

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.967
ELB improved by 0.0538754

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.915
ELB improved by 0.0522584

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.864
ELB improved by 0.0506575

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.815
ELB improved by 0.0491119

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.767
ELB improved by 0.0476574

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.721
ELB improved by 0.0463262

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.676
ELB improved by 0.0451464

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.632
ELB improved by 0.0441427

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.588
ELB improved by 0.0433368

iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.545
ELB improved by 0.0427486

iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.503
ELB improved by 0.0423971

iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.461
ELB improved by 0.0423014

iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.418
ELB improved by 0.0424823

iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.375
ELB improved by 0.042963

iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.332
ELB improved by 0.043771

iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.287
ELB improved by 0.0449388

iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.24
ELB improved by 0.046506

iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.192
ELB improved by 0.0485207

iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.141
ELB improved by 0.0510407

iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.086
ELB improved by 0.0541359

iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.028
ELB improved by 0.0578893

iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.966
ELB improved by 0.0623985

iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.898
ELB improved by 0.0677764

iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.824
ELB improved by 0.07415

iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.743
ELB improved by 0.0816571

iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.652
ELB improved by 0.0904386

iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.551
ELB improved by 0.100624

iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.439
ELB improved by 0.112308

iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.314
ELB improved by 0.125516

iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.173
ELB improved by 0.140157

iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.017
ELB improved by 0.155966

iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.845
ELB improved by 0.172449

iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.656
ELB improved by 0.188853

iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.452
ELB improved by 0.204176

iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.235
ELB improved by 0.217256

iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.008
ELB improved by 0.226935

iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.776
ELB improved by 0.232259

iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.543
ELB improved by 0.232658

iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.315
ELB improved by 0.228014

iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.096
ELB improved by 0.218636

iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.891
ELB improved by 0.205191

iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.702
ELB improved by 0.188678

iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.532
ELB improved by 0.170394

iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.38
ELB improved by 0.151756

iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.246
ELB improved by 0.133976

iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.128
ELB improved by 0.117783

iteration 113
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.025
ELB improved by 0.103357

iteration 114
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.935
ELB improved by 0.0904918

iteration 115
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.856
ELB improved by 0.0788496

iteration 116
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.788
ELB improved by 0.0681735

iteration 117
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.729
ELB improved by 0.0583774

iteration 118
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.68
ELB improved by 0.0495104

iteration 119
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.638
ELB improved by 0.0416652

iteration 120
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.603
ELB improved by 0.0348972

iteration 121
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.574
ELB improved by 0.0291917

iteration 122
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.55
ELB improved by 0.02447

iteration 123
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.529
ELB improved by 0.020615

iteration 124
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.511
ELB improved by 0.0174963

iteration 125
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.496
ELB improved by 0.014989

iteration 126
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.483
ELB improved by 0.0129819

iteration 127
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.472
ELB improved by 0.0113815

iteration 128
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.462
ELB improved by 0.0101112

iteration 129
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.453
ELB improved by 0.00910951

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-869.582
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-582.676
ELB improved by 286.906

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-520.787
ELB improved by 61.8888

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-479.614
ELB improved by 41.1734

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-459.945
ELB improved by 19.669

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-451.82
ELB improved by 8.12492

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.407
ELB improved by 5.41283

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.408
ELB improved by 4.99894

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.402
ELB improved by 5.00568

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.262
ELB improved by 5.14052

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.067
ELB improved by 5.19486

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.088
ELB improved by 4.97947

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.656
ELB improved by 4.43169

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.008
ELB improved by 3.64792

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.208
ELB improved by 2.79981

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.123
ELB improved by 2.08562

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.566
ELB improved by 1.55691

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.434
ELB improved by 1.13196

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.632
ELB improved by 0.80197

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.052
ELB improved by 0.579607

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.613
ELB improved by 0.438802

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.265
ELB improved by 0.348203

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.978
ELB improved by 0.287037

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.735
ELB improved by 0.243577

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.523
ELB improved by 0.211388

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.336
ELB improved by 0.186837

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.169
ELB improved by 0.167755

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.016
ELB improved by 0.152762

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.875
ELB improved by 0.14093

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.743
ELB improved by 0.131602

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.619
ELB improved by 0.124297

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.5
ELB improved by 0.118649

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.386
ELB improved by 0.114373

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.275
ELB improved by 0.11124

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.166
ELB improved by 0.10906

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.058
ELB improved by 0.107675

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.951
ELB improved by 0.10695

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.844
ELB improved by 0.106765

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.737
ELB improved by 0.107021

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.63
ELB improved by 0.107632

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.521
ELB improved by 0.108529

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.411
ELB improved by 0.109662

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.3
ELB improved by 0.111001

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.188
ELB improved by 0.112541

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.074
ELB improved by 0.114297

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.957
ELB improved by 0.11631

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.839
ELB improved by 0.118641

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.717
ELB improved by 0.121371

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.593
ELB improved by 0.124591

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.464
ELB improved by 0.128397

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.331
ELB improved by 0.13288

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.193
ELB improved by 0.138116

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.049
ELB improved by 0.14415

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.898
ELB improved by 0.150981

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.74
ELB improved by 0.158543

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.573
ELB improved by 0.166687

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.398
ELB improved by 0.175154

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.214
ELB improved by 0.183567

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.023
ELB improved by 0.191413

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.825
ELB improved by 0.19806

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.622
ELB improved by 0.202787

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.417
ELB improved by 0.204857

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.213
ELB improved by 0.203619

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.015
ELB improved by 0.198639

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.825
ELB improved by 0.189828

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.647
ELB improved by 0.177519

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.485
ELB improved by 0.162447

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.339
ELB improved by 0.145628

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.211
ELB improved by 0.128156

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.1
ELB improved by 0.111016

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.005
ELB improved by 0.094947

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.925
ELB improved by 0.0804127

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.857
ELB improved by 0.0676238

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.801
ELB improved by 0.0566042

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.753
ELB improved by 0.047257

iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.714
ELB improved by 0.0394201

iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.681
ELB improved by 0.0329047

iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.654
ELB improved by 0.0275197

iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.63
ELB improved by 0.0230865

iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.611
ELB improved by 0.0194453

iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.595
ELB improved by 0.0164576

iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.581
ELB improved by 0.0140062

iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.569
ELB improved by 0.0119932

iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.558
ELB improved by 0.0103377

iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.549
ELB improved by 0.00897355

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-887.029
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-571.775
ELB improved by 315.254

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-517.676
ELB improved by 54.0993

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-486.244
ELB improved by 31.4322

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-472.826
ELB improved by 13.4175

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-466.392
ELB improved by 6.43413

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-462.045
ELB improved by 4.34675

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-458.381
ELB improved by 3.66398

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-454.973
ELB improved by 3.40792

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-451.677
ELB improved by 3.29609

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.484
ELB improved by 3.19331

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.478
ELB improved by 3.00578

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.802
ELB improved by 2.6767

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.577
ELB improved by 2.22445

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.847
ELB improved by 1.73027

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.567
ELB improved by 1.28001

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.642
ELB improved by 0.924502

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.97
ELB improved by 0.672121

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.467
ELB improved by 0.503126

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.076
ELB improved by 0.390901

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.762
ELB improved by 0.314206

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.503
ELB improved by 0.259354

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.284
ELB improved by 0.218301

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.098
ELB improved by 0.186409

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.937
ELB improved by 0.160936

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.797
ELB improved by 0.140172

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.674
ELB improved by 0.122986

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.565
ELB improved by 0.10859

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.469
ELB improved by 0.0964124

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.383
ELB improved by 0.086024

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.306
ELB improved by 0.0770964

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.236
ELB improved by 0.0693736

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.174
ELB improved by 0.0626533

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.117
ELB improved by 0.0567738

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.065
ELB improved by 0.0516047

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.018
ELB improved by 0.0470397

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.975
ELB improved by 0.0429917

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.936
ELB improved by 0.0393886

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.9
ELB improved by 0.0361702

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.866
ELB improved by 0.0332865

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.836
ELB improved by 0.0306948

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.807
ELB improved by 0.0283593

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.781
ELB improved by 0.0262494

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.757
ELB improved by 0.0243388

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.734
ELB improved by 0.022605

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.713
ELB improved by 0.0210283

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.693
ELB improved by 0.0195919

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.675
ELB improved by 0.018281

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.658
ELB improved by 0.0170827

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.642
ELB improved by 0.0159856

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.627
ELB improved by 0.0149798

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.613
ELB improved by 0.0140565

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.6
ELB improved by 0.0132078

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.587
ELB improved by 0.0124267

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.576
ELB improved by 0.0117072

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.565
ELB improved by 0.0110436

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.554
ELB improved by 0.0104311

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.544
ELB improved by 0.00986517

ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
> 
> proc.time()
   user  system elapsed 
  2.818   0.264   3.125

Example timings

graper.Rcheck/graper-Ex.timings

name	user	system	elapsed
coef.graper	0.089	0.016	0.107
getPIPs	0.083	0.012	0.097
graper	0.135	0.019	0.158
makeExampleData	0.013	0.001	0.014
makeExampleDataWithUnequalGroups	0.037	0.008	0.044
plotELBO	0.259	0.020	0.291
plotGroupPenalties	0.769	0.036	0.833
plotPosterior	0.608	0.026	0.638
predict.graper	3.069	0.087	3.180
print.graper	0.083	0.011	0.097