Multiple platform build/check report for BioC 3.18 - BUILD results for CancerInSilico on kunpeng2

Hostname	OS	Arch (*)	R version	Installed pkgs
nebbiolo2	Linux (Ubuntu 22.04.2 LTS)	x86_64	4.3.1 (2023-06-16) -- "Beagle Scouts"	4729
palomino4	Windows Server 2022 Datacenter	x64	4.3.1 (2023-06-16 ucrt) -- "Beagle Scouts"	4463
lconway	macOS 12.6.5 Monterey	x86_64	4.3.1 Patched (2023-06-17 r84564) -- "Beagle Scouts"	4478
kunpeng2	Linux (openEuler 22.03 LTS-SP1)	aarch64	4.3.1 (2023-06-16) -- "Beagle Scouts"	4464
Click on any hostname to see more info about the system (e.g. compilers) () as reported by 'uname -p', except on Windows and Mac OS X*

To the developers/maintainers of the CancerInSilico package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/CancerInSilico.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.
- See Martin Grigorov's blog post for how to debug Linux ARM64 related issues on a x86_64 host.

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### Running command:
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###   /home/biocbuild/R/R-4.3.1/bin/R CMD build --keep-empty-dirs --no-resave-data CancerInSilico
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* checking for file ‘CancerInSilico/DESCRIPTION’ ... OK
* preparing ‘CancerInSilico’:
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to build vignettes
      -----------------------------------
* installing *source* package ‘CancerInSilico’ ...
** using staged installation
** libs
using C++ compiler: ‘g++ (GCC) 10.3.1’
g++ -std=gnu++17 -I"/home/biocbuild/R/R-4.3.1/include" -DNDEBUG  -I'/home/biocbuild/R/R-4.3.1/site-library/Rcpp/include' -I'/home/biocbuild/R/R-4.3.1/site-library/BH/include' -I/usr/local/include    -fPIC  -g -O2  -Wall -c RunModel.cpp -o RunModel.o
In file included from CellModels/../OffLatticeModel/OffLatticeCellBasedModel.h:8,
                 from CellModels/DrasdoHohmeModel.h:7,
                 from RunModel.cpp:4:
CellModels/../OffLatticeModel/OffLatticeCell.h: In member function ‘PointPair OffLatticeCell::centers() const’:
CellModels/../OffLatticeModel/OffLatticeCell.h:72:31: note: parameter passing for argument of type ‘std::pair<Point<double>, Point<double> >’ when C++17 is enabled changed to match C++14 in GCC 10.1
   72 |     PointPair centers() const {return mCenters;}
      |                               ^
g++ -std=gnu++17 -I"/home/biocbuild/R/R-4.3.1/include" -DNDEBUG  -I'/home/biocbuild/R/R-4.3.1/site-library/Rcpp/include' -I'/home/biocbuild/R/R-4.3.1/site-library/BH/include' -I/usr/local/include    -fPIC  -g -O2  -Wall -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++17 -I"/home/biocbuild/R/R-4.3.1/include" -DNDEBUG  -I'/home/biocbuild/R/R-4.3.1/site-library/Rcpp/include' -I'/home/biocbuild/R/R-4.3.1/site-library/BH/include' -I/usr/local/include    -fPIC  -g -O2  -Wall -c test-runner.cpp -o test-runner.o
In file included from test-runner.cpp:2:
Tests/catch.h:6473:41: error: array bound is not an integer constant before ‘]’ token
 6473 |         static char altStackMem[SIGSTKSZ];
      |                                         ^
Tests/catch.h: In constructor ‘Catch::FatalConditionHandler::FatalConditionHandler()’:
Tests/catch.h:6492:30: error: ‘altStackMem’ was not declared in this scope
 6492 |             sigStack.ss_sp = altStackMem;
      |                              ^~~~~~~~~~~
Tests/catch.h: At global scope:
Tests/catch.h:6524:53: error: array bound is not an integer constant before ‘]’ token
 6524 |     char FatalConditionHandler::altStackMem[SIGSTKSZ] = {};
      |                                                     ^
make: *** [/home/biocbuild/R/R-4.3.1/etc/Makeconf:200: test-runner.o] Error 1
ERROR: compilation failed for package ‘CancerInSilico’
* removing ‘/home/biocbuild/tmp/RtmpbMahhn/Rinst36bddd6bd53552/CancerInSilico’
      -----------------------------------
ERROR: package installation failed

BUILD results for CancerInSilico on kunpeng2

Summary

Command output