Back to Multiple platform build/check report for BioC 3.14
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This page was generated on 2022-04-13 12:06:25 -0400 (Wed, 13 Apr 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.3 (2022-03-10) -- "One Push-Up" 4324
tokay2Windows Server 2012 R2 Standardx644.1.3 (2022-03-10) -- "One Push-Up" 4077
machv2macOS 10.14.6 Mojavex86_644.1.3 (2022-03-10) -- "One Push-Up" 4137
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD BIN results for dagLogo on tokay2


To the developers/maintainers of the dagLogo package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/dagLogo.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 446/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
dagLogo 1.32.0  (landing page)
Jianhong Ou
Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022)
git_url: https://git.bioconductor.org/packages/dagLogo
git_branch: RELEASE_3_14
git_last_commit: 5a04a5f
git_last_commit_date: 2021-10-26 12:10:15 -0400 (Tue, 26 Oct 2021)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  NO, package depends on 'UniProt.ws' which is not available
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: dagLogo
Version: 1.32.0
Command: rm -rf dagLogo.buildbin-libdir && mkdir dagLogo.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=dagLogo.buildbin-libdir dagLogo_1.32.0.tar.gz
StartedAt: 2022-04-13 05:59:07 -0400 (Wed, 13 Apr 2022)
EndedAt: 2022-04-13 06:00:04 -0400 (Wed, 13 Apr 2022)
EllapsedTime: 56.8 seconds
RetCode: 0
Status:   OK  
PackageFile: dagLogo_1.32.0.zip
PackageFileSize: 3.08 MiB

Command output

##############################################################################
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###
### Running command:
###
###   rm -rf dagLogo.buildbin-libdir && mkdir dagLogo.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=dagLogo.buildbin-libdir dagLogo_1.32.0.tar.gz
###
##############################################################################
##############################################################################



install for i386

* installing *source* package 'dagLogo' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'dagLogo'
    finding HTML links ... done
    Proteome-class                          html  
    addScheme                               html  
    availableSchemes                        html  
    buildBackgroundModel                    html  
    buildZTestBackgroundModel               html  
    cleanPeptides                           html  
    colorsets                               html  
    colorsets2                              html  
    dagBackground-class                     html  
    dagHeatmap                              html  
    dagLogo-package                         html  
    dagLogo                                 html  
    dagPeptides-class                       html  
    ecoli.proteome                          html  
    fetchSequence                           html  
    formatSequence                          html  
    getData                                 html  
    getGroupingSymbol                       html  
    initiateBackgroundModel                 html  
    nameHash                                html  
    prepareProteome                         html  
    finding level-2 HTML links ... done

    prepareProteomeByFTP                    html  
    prepareProteomeByUniProtWS              html  
    proteome.example                        html  
    seq.example                             html  
    testDAU                                 html  
    testDAUresults-class                    html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'dagLogo' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'dagLogo' as dagLogo_1.32.0.zip
* DONE (dagLogo)