Lei Huang
| Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022) |
| git_url: https://git.bioconductor.org/packages/GeneAnswers |
| git_branch: RELEASE_3_14 |
| git_last_commit: ada47cb |
| git_last_commit_date: 2021-10-26 11:54:49 -0400 (Tue, 26 Oct 2021) |
| Back to Multiple platform build/check report for BioC 3.14 |
|
This page was generated on 2022-04-13 12:06:36 -0400 (Wed, 13 Apr 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4324 |
| tokay2 | Windows Server 2012 R2 Standard | x64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4077 |
| machv2 | macOS 10.14.6 Mojave | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4137 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
|
To the developers/maintainers of the GeneAnswers package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/GeneAnswers.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 717/2083 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
Lei Huang
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | WARNINGS | | ||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | WARNINGS | OK | | ||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | TIMEOUT | OK | |||||||||
| Package: GeneAnswers |
| Version: 2.36.0 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/GeneAnswers_2.36.0.tar.gz && rm -rf GeneAnswers.buildbin-libdir && mkdir GeneAnswers.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GeneAnswers.buildbin-libdir GeneAnswers_2.36.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL GeneAnswers_2.36.0.zip && rm GeneAnswers_2.36.0.tar.gz GeneAnswers_2.36.0.zip |
| StartedAt: 2022-04-12 05:49:42 -0400 (Tue, 12 Apr 2022) |
| EndedAt: 2022-04-12 05:53:00 -0400 (Tue, 12 Apr 2022) |
| EllapsedTime: 198.1 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/GeneAnswers_2.36.0.tar.gz && rm -rf GeneAnswers.buildbin-libdir && mkdir GeneAnswers.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GeneAnswers.buildbin-libdir GeneAnswers_2.36.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL GeneAnswers_2.36.0.zip && rm GeneAnswers_2.36.0.tar.gz GeneAnswers_2.36.0.zip
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% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
1 32.6M 1 598k 0 0 997k 0 0:00:33 --:--:-- 0:00:33 997k
7 32.6M 7 2436k 0 0 1551k 0 0:00:21 0:00:01 0:00:20 1551k
15 32.6M 15 5195k 0 0 2021k 0 0:00:16 0:00:02 0:00:14 2021k
26 32.6M 26 8865k 0 0 2483k 0 0:00:13 0:00:03 0:00:10 2483k
40 32.6M 40 13.0M 0 0 2927k 0 0:00:11 0:00:04 0:00:07 2928k
54 32.6M 54 17.6M 0 0 3242k 0 0:00:10 0:00:05 0:00:05 3513k
64 32.6M 64 20.9M 0 0 3265k 0 0:00:10 0:00:06 0:00:04 3804k
77 32.6M 77 25.1M 0 0 3402k 0 0:00:09 0:00:07 0:00:02 4112k
92 32.6M 92 30.2M 0 0 3615k 0 0:00:09 0:00:08 0:00:01 4424k
100 32.6M 100 32.6M 0 0 3723k 0 0:00:08 0:00:08 --:--:-- 4547k
install for i386
* installing *source* package 'GeneAnswers' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
Warning: replacing previous import 'stats::decompose' by 'igraph::decompose' when loading 'GeneAnswers'
Warning: replacing previous import 'stats::spectrum' by 'igraph::spectrum' when loading 'GeneAnswers'
** help
*** installing help indices
converting help for package 'GeneAnswers'
finding HTML links ... done
DO html
DOLite html
DOLiteTerm html
DmIALite html
GeneAnswers-class html
GeneAnswers-package html
HsIALite html
MmIALite html
RnIALite html
buildNet html
caBIO.PATHGenes html
caBIO2entrez html
categoryNet html
chartPlots html
drawTable html
entrez2caBIO html
geneAnnotationHeatmap html
geneAnswersBuilder html
geneAnswersChartPlots html
geneAnswersConceptNet html
geneAnswersConceptRelation html
geneAnswersConcepts html
geneAnswersHeatmap html
geneAnswersHomoMapping html
geneAnswersReadable html
geneAnswersSort html
geneConceptNet html
getCategoryList html
getCategoryTerms html
getConceptTable html
getConnectedGraph html
getDOLiteTerms html
getGOList html
getHomoGeneIDs html
getListGIF html
getMultiLayerGraphIDs html
getNextGOIDs html
getPATHList html
getPATHTerms html
getREACTOMEPATHList html
getREACTOMEPATHTerms html
getSingleLayerGraphIDs html
getSymbols html
getTotalGeneNumber html
getcaBIOPATHList html
getcaBIOPATHTerms html
groupReport html
humanExpr html
humanGeneInput html
mouseExpr html
mouseGeneInput html
sampleGroupsData html
searchEntrez html
topCategory html
topCategoryGenes html
topDOLITE html
topDOLITEGenes html
topGO html
topGOGenes html
topPATH html
topPATHGenes html
topREACTOME.PATH html
topREACTOME.PATHGenes html
topcaBIO.PATH html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning: replacing previous import 'stats::decompose' by 'igraph::decompose' when loading 'GeneAnswers'
Warning: replacing previous import 'stats::spectrum' by 'igraph::spectrum' when loading 'GeneAnswers'
Warning: Package 'GeneAnswers' is deprecated and will be removed from
Bioconductor version 3.15
** testing if installed package can be loaded from final location
Warning: replacing previous import 'stats::decompose' by 'igraph::decompose' when loading 'GeneAnswers'
Warning: replacing previous import 'stats::spectrum' by 'igraph::spectrum' when loading 'GeneAnswers'
Warning: Package 'GeneAnswers' is deprecated and will be removed from
Bioconductor version 3.15
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'GeneAnswers' ...
** testing if installed package can be loaded
Warning: replacing previous import 'stats::decompose' by 'igraph::decompose' when loading 'GeneAnswers'
Warning: replacing previous import 'stats::spectrum' by 'igraph::spectrum' when loading 'GeneAnswers'
Warning: Package 'GeneAnswers' is deprecated and will be removed from
Bioconductor version 3.15
* MD5 sums
packaged installation of 'GeneAnswers' as GeneAnswers_2.36.0.zip
* DONE (GeneAnswers)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'GeneAnswers' successfully unpacked and MD5 sums checked