| Back to Multiple platform build/check report for BioC 3.14 |
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This page was generated on 2022-04-13 12:06:09 -0400 (Wed, 13 Apr 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4324 |
| tokay2 | Windows Server 2012 R2 Standard | x64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4077 |
| machv2 | macOS 10.14.6 Mojave | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4137 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
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To the developers/maintainers of the AgiMicroRna package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/AgiMicroRna.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 37/2083 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| AgiMicroRna 2.44.0 (landing page) Pedro Lopez-Romero
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | OK | |||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | ERROR | OK | ERROR | ERROR | |||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | |||||||||
| Package: AgiMicroRna |
| Version: 2.44.0 |
| Command: C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD check --force-multiarch --install=check:AgiMicroRna.install-out.txt --library=C:\Users\biocbuild\bbs-3.14-bioc\R\library --no-vignettes --timings AgiMicroRna_2.44.0.tar.gz |
| StartedAt: 2022-04-12 15:28:26 -0400 (Tue, 12 Apr 2022) |
| EndedAt: 2022-04-12 15:28:32 -0400 (Tue, 12 Apr 2022) |
| EllapsedTime: 6.0 seconds |
| RetCode: 1 |
| Status: ERROR |
| CheckDir: AgiMicroRna.Rcheck |
| Warnings: NA |
############################################################################## ############################################################################## ### ### Running command: ### ### C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD check --force-multiarch --install=check:AgiMicroRna.install-out.txt --library=C:\Users\biocbuild\bbs-3.14-bioc\R\library --no-vignettes --timings AgiMicroRna_2.44.0.tar.gz ### ############################################################################## ############################################################################## * using log directory 'C:/Users/biocbuild/bbs-3.14-bioc/meat/AgiMicroRna.Rcheck' * using R version 4.1.3 (2022-03-10) * using platform: x86_64-w64-mingw32 (64-bit) * using session charset: ISO8859-1 * using option '--no-vignettes' * checking for file 'AgiMicroRna/DESCRIPTION' ... OK * this is package 'AgiMicroRna' version '2.44.0' * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'AgiMicroRna' can be installed ... ERROR Installation failed. See 'C:/Users/biocbuild/bbs-3.14-bioc/meat/AgiMicroRna.Rcheck/00install.out' for details. * DONE Status: 1 ERROR See 'C:/Users/biocbuild/bbs-3.14-bioc/meat/AgiMicroRna.Rcheck/00check.log' for details.
AgiMicroRna.Rcheck/00install.out
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/AgiMicroRna_2.44.0.tar.gz && rm -rf AgiMicroRna.buildbin-libdir && mkdir AgiMicroRna.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=AgiMicroRna.buildbin-libdir AgiMicroRna_2.44.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL AgiMicroRna_2.44.0.zip && rm AgiMicroRna_2.44.0.tar.gz AgiMicroRna_2.44.0.zip
###
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% Total % Received % Xferd Average Speed Time Time Time Current
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0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
41 1338k 41 560k 0 0 833k 0 0:00:01 --:--:-- 0:00:01 833k
100 1338k 100 1338k 0 0 1123k 0 0:00:01 0:00:01 --:--:-- 1123k
install for i386
* installing *source* package 'AgiMicroRna' ...
** using staged installation
** R
** data
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'AgiMicroRna'
finding HTML links ... done
HeatMapMicroRna html
PCAplotMicroRna html
RleMicroRna html
basicLimma html
boxplotMicroRna html
cvArray html
dd.micro html
ddPROC html
dim.uRNAList html
dimnames.uRNAList html
esetMicroRna html
filterMicroRna html
getDecideTests html
hierclusMicroRna html
mvaBASIC html
mvaMicroRna html
plotDensityMicroRna html
pvalHistogram html
qcPlots html
readMicroRnaAFE html
readTargets html
rmaMicroRna html
significantMicroRna html
summary.uRNAList html
targets.micro html
tgsMicroRna html
tgsNormalization html
uRNAList html
writeEset html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
ERROR: loading failed
* removing 'C:/Users/biocbuild/bbs-3.14-bioc/meat/AgiMicroRna.buildbin-libdir/AgiMicroRna'