| Back to Multiple platform build/check report for BioC 3.12 |
|
This page was generated on 2021-05-06 12:31:03 -0400 (Thu, 06 May 2021).
|
To the developers/maintainers of the epigenomix package: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 556/1974 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| epigenomix 1.30.0 (landing page) Hans-Ulrich Klein
| malbec1 | Linux (Ubuntu 18.04.5 LTS) / x86_64 | OK | OK | OK | |||||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | |||||||||
| merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | |||||||||
| Package: epigenomix |
| Version: 1.30.0 |
| Command: rm -rf epigenomix.buildbin-libdir && mkdir epigenomix.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=epigenomix.buildbin-libdir epigenomix_1.30.0.tar.gz |
| StartedAt: 2021-05-06 09:00:27 -0400 (Thu, 06 May 2021) |
| EndedAt: 2021-05-06 09:01:28 -0400 (Thu, 06 May 2021) |
| EllapsedTime: 60.6 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: epigenomix_1.30.0.zip |
| PackageFileSize: 1.008 MiB |
##############################################################################
##############################################################################
###
### Running command:
###
### rm -rf epigenomix.buildbin-libdir && mkdir epigenomix.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=epigenomix.buildbin-libdir epigenomix_1.30.0.tar.gz
###
##############################################################################
##############################################################################
install for i386
* installing *source* package 'epigenomix' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
Warning in .recacheSubclasses(def@className, def, env) :
undefined subclass "numericVector" of class "Mnumeric"; definition not updated
** help
*** installing help indices
converting help for package 'epigenomix'
finding HTML links ... done
ChIPseqSet-class html
finding level-2 HTML links ... done
MixModel-class html
MixModelBayes-class html
MixModelML-class html
MixtureComponent-class html
bayesMixModel html
calculateCrossCorrelation html
eSet html
fpkm html
getAlignmentQuality html
integrateData html
mappedReads html
matchProbeToPromoter html
mlMixModel html
normalize html
normalizeChIP html
plotChains html
plotClassification html
plotComponents html
summarizeReads html
transToTSS html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning in .recacheSubclasses(def@className, def, env) :
undefined subclass "numericVector" of class "Mnumeric"; definition not updated
** testing if installed package can be loaded from final location
Warning in .recacheSubclasses(def@className, def, env) :
undefined subclass "numericVector" of class "Mnumeric"; definition not updated
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'epigenomix' ...
** testing if installed package can be loaded
Warning in .recacheSubclasses(def@className, def, env) :
undefined subclass "numericVector" of class "Mnumeric"; definition not updated
* MD5 sums
packaged installation of 'epigenomix' as epigenomix_1.30.0.zip
* DONE (epigenomix)