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BUILD BIN report for TCC on tokay1

This page was generated on 2021-05-06 12:33:55 -0400 (Thu, 06 May 2021).

To the developers/maintainers of the TCC package:
Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 1841/1974HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
TCC 1.30.0  (landing page)
Jianqiang Sun
Snapshot Date: 2021-05-05 14:51:38 -0400 (Wed, 05 May 2021)
URL: https://git.bioconductor.org/packages/TCC
Branch: RELEASE_3_12
Last Commit: 40c62a0
Last Changed Date: 2020-10-27 10:52:27 -0400 (Tue, 27 Oct 2020)
malbec1Linux (Ubuntu 18.04.5 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version exists in internal repository
tokay1Windows Server 2012 R2 Standard / x64  OK    OK    WARNINGS    OK  UNNEEDED, same version exists in internal repository
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version exists in internal repository

Summary

Package: TCC
Version: 1.30.0
Command: rm -rf TCC.buildbin-libdir && mkdir TCC.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=TCC.buildbin-libdir TCC_1.30.0.tar.gz
StartedAt: 2021-05-06 10:15:05 -0400 (Thu, 06 May 2021)
EndedAt: 2021-05-06 10:15:53 -0400 (Thu, 06 May 2021)
EllapsedTime: 48.0 seconds
RetCode: 0
Status:   OK   
PackageFile: TCC_1.30.0.zip
PackageFileSize: 1.873 MiB

Command output

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###
### Running command:
###
###   rm -rf TCC.buildbin-libdir && mkdir TCC.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=TCC.buildbin-libdir TCC_1.30.0.tar.gz
###
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install for i386

* installing *source* package 'TCC' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
Creating a new generic function for 'calcNormFactors' in package 'TCC'
** help
*** installing help indices
  converting help for package 'TCC'
    finding HTML links ... done
    ROKU                                    html  
    TCC-class                               html  
    TCC                                     html  
    WAD                                     html  
    arab                                    html  
    calcAUCValue                            html  
    calcNormFactors                         html  
    clusterSample                           html  
    estimateDE                              html  
Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpIJBbyf/R.INSTALL1c20d75821/TCC/man/estimateDE.Rd:60: file link 'glmLRT' in package 'edgeR' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpIJBbyf/R.INSTALL1c20d75821/TCC/man/estimateDE.Rd:67: file link 'glmLRT' in package 'edgeR' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpIJBbyf/R.INSTALL1c20d75821/TCC/man/estimateDE.Rd:75: file link 'getPriors.NB' in package 'baySeq' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpIJBbyf/R.INSTALL1c20d75821/TCC/man/estimateDE.Rd:122: file link 'glmLRT' in package 'edgeR' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpIJBbyf/R.INSTALL1c20d75821/TCC/man/estimateDE.Rd:131: file link 'getPriors.NB' in package 'baySeq' does not exist and so has been treated as a topic
    filterLowCountGenes                     html  
    getNormalizedData                       html  
    getResult                               html  
Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpIJBbyf/R.INSTALL1c20d75821/TCC/man/getResult.Rd:20: file link 'plot' in package 'TCC' does not exist and so has been treated as a topic
    hypoData                                html  
    hypoData_mg                             html  
    hypoData_ts                             html  
    makeFCMatrix                            html  
    nakai                                   html  
    plot.TCC                                html  
    plotFCPseudocolor                       html  
    simulateReadCounts                      html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'TCC' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'TCC' as TCC_1.30.0.zip
* DONE (TCC)