Rujin Wang
| Snapshot Date: 2021-05-05 14:51:38 -0400 (Wed, 05 May 2021) |
| URL: https://git.bioconductor.org/packages/SCOPE |
| Branch: RELEASE_3_12 |
| Last Commit: b63bbf0 |
| Last Changed Date: 2020-10-27 11:53:33 -0400 (Tue, 27 Oct 2020) |
| Back to Multiple platform build/check report for BioC 3.12 |
|
This page was generated on 2021-05-06 12:33:29 -0400 (Thu, 06 May 2021).
|
To the developers/maintainers of the SCOPE package: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1652/1974 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| SCOPE 1.2.0 (landing page) Rujin Wang
| malbec1 | Linux (Ubuntu 18.04.5 LTS) / x86_64 | OK | OK | WARNINGS | | ||||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | WARNINGS | OK | | ||||||||
| merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | WARNINGS | OK | | ||||||||
| Package: SCOPE |
| Version: 1.2.0 |
| Command: rm -rf SCOPE.buildbin-libdir && mkdir SCOPE.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=SCOPE.buildbin-libdir SCOPE_1.2.0.tar.gz |
| StartedAt: 2021-05-06 10:04:17 -0400 (Thu, 06 May 2021) |
| EndedAt: 2021-05-06 10:05:00 -0400 (Thu, 06 May 2021) |
| EllapsedTime: 43.7 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: SCOPE_1.2.0.zip |
| PackageFileSize: 632.2 KiB |
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### Running command:
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### rm -rf SCOPE.buildbin-libdir && mkdir SCOPE.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=SCOPE.buildbin-libdir SCOPE_1.2.0.tar.gz
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install for i386
* installing *source* package 'SCOPE' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
Warning: replacing previous import 'DescTools::%:%' by 'foreach::%:%' when loading 'SCOPE'
** help
*** installing help indices
converting help for package 'SCOPE'
finding HTML links ... done
QCmetric.scopeDemo html
Y_sim html
coverageObj.scopeDemo html
get_bam_bed html
get_coverage_scDNA html
get_gc html
get_gini html
get_mapp html
get_samp_QC html
iCN_sim html
initialize_ploidy html
initialize_ploidy_group html
normObj.scopeDemo html
normalize_codex2_ns_noK html
normalize_scope html
normalize_scope_foreach html
normalize_scope_group html
perform_qc html
plot_EM_fit html
plot_iCN html
ref.scopeDemo html
ref_sim html
segment_CBScs html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning: replacing previous import 'DescTools::%:%' by 'foreach::%:%' when loading 'SCOPE'
** testing if installed package can be loaded from final location
Warning: replacing previous import 'DescTools::%:%' by 'foreach::%:%' when loading 'SCOPE'
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'SCOPE' ...
** testing if installed package can be loaded
Warning: replacing previous import 'DescTools::%:%' by 'foreach::%:%' when loading 'SCOPE'
* MD5 sums
packaged installation of 'SCOPE' as SCOPE_1.2.0.zip
* DONE (SCOPE)