| Back to Multiple platform build/check report for BioC 3.12 |
|
This page was generated on 2021-05-06 12:30:29 -0400 (Thu, 06 May 2021).
|
To the developers/maintainers of the CorMut package: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 381/1974 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
Zhenpeng Li
| malbec1 | Linux (Ubuntu 18.04.5 LTS) / x86_64 | OK | ERROR | skipped | |||||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | OK | ERROR | skipped | skipped | |||||||||
| merida1 | macOS 10.14.6 Mojave / x86_64 | OK | ERROR | skipped | skipped | |||||||||
| Package: CorMut |
| Version: 1.32.0 |
| Command: chmod a+r CorMut -R && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data CorMut |
| StartedAt: 2021-05-05 20:23:22 -0400 (Wed, 05 May 2021) |
| EndedAt: 2021-05-05 20:23:35 -0400 (Wed, 05 May 2021) |
| EllapsedTime: 13.4 seconds |
| RetCode: 1 |
| Status: ERROR |
| PackageFile: None |
| PackageFileSize: NA |
##############################################################################
##############################################################################
###
### Running command:
###
### chmod a+r CorMut -R && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data CorMut
###
##############################################################################
##############################################################################
* checking for file 'CorMut/DESCRIPTION' ... OK
* preparing 'CorMut':
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building 'CorMut.Rnw' using Sweave
Loading required package: seqinr
Loading required package: igraph
Attaching package: 'igraph'
The following objects are masked from 'package:stats':
decompose, spectrum
The following object is masked from 'package:base':
union
Warning: Package 'CorMut' is deprecated and will be removed from Bioconductor
version 3.13
Error: processing vignette 'CorMut.Rnw' failed with diagnostics:
chunk 5
Error in x - min(x) : non-numeric argument to binary operator
--- failed re-building 'CorMut.Rnw'
SUMMARY: processing the following file failed:
'CorMut.Rnw'
Error: Vignette re-building failed.
Execution halted