| Back to Multiple platform build/check report for BioC 3.12 |
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This page was generated on 2021-05-06 12:30:15 -0400 (Thu, 06 May 2021).
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To the developers/maintainers of the CHRONOS package: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 302/1974 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| CHRONOS 1.18.0 (landing page) Panos Balomenos
| malbec1 | Linux (Ubuntu 18.04.5 LTS) / x86_64 | OK | OK | OK | |||||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | |||||||||
| merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | |||||||||
| Package: CHRONOS |
| Version: 1.18.0 |
| Command: rm -rf CHRONOS.buildbin-libdir && mkdir CHRONOS.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe --arch x64 CMD INSTALL --no-multiarch --build --library=CHRONOS.buildbin-libdir CHRONOS_1.18.0.tar.gz |
| StartedAt: 2021-05-06 08:42:53 -0400 (Thu, 06 May 2021) |
| EndedAt: 2021-05-06 08:43:37 -0400 (Thu, 06 May 2021) |
| EllapsedTime: 43.8 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: CHRONOS_1.18.0.zip |
| PackageFileSize: 1.322 MiB |
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### Running command:
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### rm -rf CHRONOS.buildbin-libdir && mkdir CHRONOS.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe --arch x64 CMD INSTALL --no-multiarch --build --library=CHRONOS.buildbin-libdir CHRONOS_1.18.0.tar.gz
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* installing *source* package 'CHRONOS' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'CHRONOS'
finding HTML links ... done
CHRONOSrun html
convertMiRNANomenclature html
convertNomenclature html
createPathwayGraphs html
downloadKEGGPathwayList html
downloadMiRecords html
downloadPathways html
extractLinearSubpathways html
extractNonLinearSubpathways html
getEdgeTypes html
importExpressions html
pathwayMeasures html
scoreSubpathways html
subpathwayKEGGmap html
subpathwayMiRNAs html
visualizeResults html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'CHRONOS' as CHRONOS_1.18.0.zip
* DONE (CHRONOS)